https://launchpad.net/ubuntu/+source/gatb-core/1.4.1+git20181225.44d5a44+dfsg-1/+build/16663214 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-061 4.4.0-145-generic #171-Ubuntu SMP Tue Mar 26 12:45:17 UTC 2019 aarch64 Buildd toolchain package versions: launchpad-buildd_169 python-lpbuildd_169 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 21 Apr 11:20:05 ntpdate[1895]: adjust time server 10.211.37.1 offset 0.014933 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=eoan --arch=armhf PACKAGEBUILD-16663214 --image-type chroot /home/buildd/filecache-default/a8e076447bc9c859868a26138221e631724b6c90 Creating target for build PACKAGEBUILD-16663214 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=eoan --arch=armhf PACKAGEBUILD-16663214 Starting target for build PACKAGEBUILD-16663214 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=eoan --arch=armhf PACKAGEBUILD-16663214 'deb http://ftpmaster.internal/ubuntu eoan main universe' Overriding sources.list in build-PACKAGEBUILD-16663214 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=eoan --arch=armhf PACKAGEBUILD-16663214 Updating target for build PACKAGEBUILD-16663214 Get:1 http://ftpmaster.internal/ubuntu eoan InRelease [215 kB] Get:2 http://ftpmaster.internal/ubuntu eoan/main armhf Packages [956 kB] Get:3 http://ftpmaster.internal/ubuntu eoan/main Translation-en [509 kB] Get:4 http://ftpmaster.internal/ubuntu eoan/universe armhf Packages [8754 kB] Get:5 http://ftpmaster.internal/ubuntu eoan/universe Translation-en [5251 kB] Fetched 15.7 MB in 8s (1886 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libreadline7 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: gcc-9-base libreadline8 The following packages will be upgraded: adduser apt base-files base-passwd bash binutils binutils-arm-linux-gnueabihf binutils-common bsdutils build-essential ca-certificates coreutils cpp cpp-8 dash debconf debianutils diffutils dpkg dpkg-dev e2fslibs e2fsprogs fdisk findutils g++ g++-8 gcc gcc-8 gcc-8-base gpg gpg-agent gpgconf gpgv grep gzip init init-system-helpers libacl1 libapparmor1 libapt-pkg5.0 libargon2-1 libasan5 libassuan0 libatomic1 libattr1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcomerr2 libcryptsetup12 libdb5.3 libdebconfclient0 libdpkg-perl libext2fs2 libfdisk1 libgcc-8-dev libgcc1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libhogweed4 libidn11 libjson-c3 libkmod2 liblz4-1 liblzma5 libmount1 libmpfr6 libncurses6 libncursesw6 libnettle6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre3 libperl5.28 libpng16-16 libprocps7 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libss2 libssl1.1 libstdc++-8-dev libstdc++6 libsystemd0 libtinfo6 libubsan1 libudev1 libunistring2 libuuid1 libzstd1 linux-libc-dev login lsb-base mount multiarch-support ncurses-base ncurses-bin openssl optipng passwd perl perl-base perl-modules-5.28 pkgbinarymangler procps readline-common sed systemd systemd-sysv tar tzdata util-linux xz-utils zlib1g 128 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 63.9 MB of archives. After this operation, 6878 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu eoan/main armhf libc6-dev armhf 2.29-0ubuntu2 [1911 kB] Get:2 http://ftpmaster.internal/ubuntu eoan/main armhf libc-dev-bin armhf 2.29-0ubuntu2 [59.3 kB] Get:3 http://ftpmaster.internal/ubuntu eoan/main armhf linux-libc-dev armhf 5.0.0-13.14 [1033 kB] Get:4 http://ftpmaster.internal/ubuntu eoan/main armhf libc6 armhf 2.29-0ubuntu2 [2131 kB] Get:5 http://ftpmaster.internal/ubuntu eoan/main armhf libc-bin armhf 2.29-0ubuntu2 [459 kB] Get:6 http://ftpmaster.internal/ubuntu eoan/main armhf gcc-9-base armhf 9-20190420-1ubuntu1 [16.8 kB] Get:7 http://ftpmaster.internal/ubuntu eoan/main armhf libgcc1 armhf 1:9-20190420-1ubuntu1 [37.5 kB] Get:8 http://ftpmaster.internal/ubuntu eoan/main armhf base-files armhf 10.1ubuntu10 [59.8 kB] Get:9 http://ftpmaster.internal/ubuntu eoan/main armhf debianutils armhf 4.8.6.1 [84.2 kB] Get:10 http://ftpmaster.internal/ubuntu eoan/main armhf bash armhf 5.0-3ubuntu1 [572 kB] Get:11 http://ftpmaster.internal/ubuntu eoan/main armhf bsdutils armhf 1:2.33.1-0.1ubuntu2 [58.1 kB] Get:12 http://ftpmaster.internal/ubuntu eoan/main armhf coreutils armhf 8.30-1ubuntu1 [1126 kB] Get:13 http://ftpmaster.internal/ubuntu eoan/main armhf lsb-base all 10.2019031300ubuntu1 [12.5 kB] Get:14 http://ftpmaster.internal/ubuntu eoan/main armhf tar armhf 1.30+dfsg-5 [219 kB] Get:15 http://ftpmaster.internal/ubuntu eoan/main armhf dpkg armhf 1.19.6ubuntu1 [1085 kB] Get:16 http://ftpmaster.internal/ubuntu eoan/main armhf libperl5.28 armhf 5.28.1-6 [3163 kB] Get:17 http://ftpmaster.internal/ubuntu eoan/main armhf perl armhf 5.28.1-6 [204 kB] Get:18 http://ftpmaster.internal/ubuntu eoan/main armhf perl-base armhf 5.28.1-6 [1398 kB] Get:19 http://ftpmaster.internal/ubuntu eoan/main armhf perl-modules-5.28 all 5.28.1-6 [2818 kB] Get:20 http://ftpmaster.internal/ubuntu eoan/main armhf libdb5.3 armhf 5.3.28+dfsg1-0.5 [590 kB] Get:21 http://ftpmaster.internal/ubuntu eoan/main armhf libgdbm6 armhf 1.18.1-4 [24.4 kB] Get:22 http://ftpmaster.internal/ubuntu eoan/main armhf libgdbm-compat4 armhf 1.18.1-4 [5788 B] Get:23 http://ftpmaster.internal/ubuntu eoan/main armhf zlib1g armhf 1:1.2.11.dfsg-1ubuntu2 [48.3 kB] Get:24 http://ftpmaster.internal/ubuntu eoan/main armhf debconf all 1.5.71 [122 kB] Get:25 http://ftpmaster.internal/ubuntu eoan/main armhf dash armhf 0.5.10.2-4ubuntu1 [78.2 kB] Get:26 http://ftpmaster.internal/ubuntu eoan/main armhf diffutils armhf 1:3.7-2 [180 kB] Get:27 http://ftpmaster.internal/ubuntu eoan/main armhf findutils armhf 4.6.0+git+20190209-2 [307 kB] Get:28 http://ftpmaster.internal/ubuntu eoan/main armhf grep armhf 3.3-1 [138 kB] Get:29 http://ftpmaster.internal/ubuntu eoan/main armhf gzip armhf 1.9-3 [89.8 kB] Get:30 http://ftpmaster.internal/ubuntu eoan/main armhf libsmartcols1 armhf 2.33.1-0.1ubuntu2 [80.7 kB] Get:31 http://ftpmaster.internal/ubuntu eoan/main armhf libuuid1 armhf 2.33.1-0.1ubuntu2 [20.2 kB] Get:32 http://ftpmaster.internal/ubuntu eoan/main armhf libblkid1 armhf 2.33.1-0.1ubuntu2 [119 kB] Get:33 http://ftpmaster.internal/ubuntu eoan/main armhf libfdisk1 armhf 2.33.1-0.1ubuntu2 [159 kB] Get:34 http://ftpmaster.internal/ubuntu eoan/main armhf libmount1 armhf 2.33.1-0.1ubuntu2 [130 kB] Get:35 http://ftpmaster.internal/ubuntu eoan/main armhf libncurses6 armhf 6.1+20181013-2ubuntu2 [79.0 kB] Get:36 http://ftpmaster.internal/ubuntu eoan/main armhf libtinfo6 armhf 6.1+20181013-2ubuntu2 [70.7 kB] Get:37 http://ftpmaster.internal/ubuntu eoan/main armhf libncursesw6 armhf 6.1+20181013-2ubuntu2 [105 kB] Get:38 http://ftpmaster.internal/ubuntu eoan/main armhf fdisk armhf 2.33.1-0.1ubuntu2 [106 kB] Get:39 http://ftpmaster.internal/ubuntu eoan/main armhf login armhf 1:4.5-1.1ubuntu2 [261 kB] Get:40 http://ftpmaster.internal/ubuntu eoan/main armhf util-linux armhf 2.33.1-0.1ubuntu2 [925 kB] Get:41 http://ftpmaster.internal/ubuntu eoan/main armhf ncurses-bin armhf 6.1+20181013-2ubuntu2 [156 kB] Get:42 http://ftpmaster.internal/ubuntu eoan/main armhf sed armhf 4.7-1 [181 kB] Get:43 http://ftpmaster.internal/ubuntu eoan/main armhf libdebconfclient0 armhf 0.247ubuntu1 [5900 B] Get:44 http://ftpmaster.internal/ubuntu eoan/main armhf base-passwd armhf 3.5.46 [45.9 kB] Get:45 http://ftpmaster.internal/ubuntu eoan/main armhf init-system-helpers all 1.56+nmu1 [38.2 kB] Get:46 http://ftpmaster.internal/ubuntu eoan/main armhf ncurses-base all 6.1+20181013-2ubuntu2 [17.9 kB] Get:47 http://ftpmaster.internal/ubuntu eoan/main armhf libnettle6 armhf 3.4.1-1 [123 kB] Get:48 http://ftpmaster.internal/ubuntu eoan/main armhf libhogweed4 armhf 3.4.1-1 [129 kB] Get:49 http://ftpmaster.internal/ubuntu eoan/main armhf libp11-kit0 armhf 0.23.15-2 [163 kB] Get:50 http://ftpmaster.internal/ubuntu eoan/main armhf libunistring2 armhf 0.9.10-1ubuntu2 [357 kB] Get:51 http://ftpmaster.internal/ubuntu eoan/main armhf libgnutls30 armhf 3.6.5-2ubuntu1 [700 kB] Get:52 http://ftpmaster.internal/ubuntu eoan/main armhf liblz4-1 armhf 1.8.3-1ubuntu1 [66.6 kB] Get:53 http://ftpmaster.internal/ubuntu eoan/main armhf liblzma5 armhf 5.2.4-1 [84.6 kB] Get:54 http://ftpmaster.internal/ubuntu eoan/main armhf libstdc++6 armhf 9-20190420-1ubuntu1 [451 kB] Get:55 http://ftpmaster.internal/ubuntu eoan/main armhf libudev1 armhf 240-6ubuntu5 [58.0 kB] Get:56 http://ftpmaster.internal/ubuntu eoan/main armhf libzstd1 armhf 1.3.8+dfsg-3 [195 kB] Get:57 http://ftpmaster.internal/ubuntu eoan/main armhf libapt-pkg5.0 armhf 1.8.0 [738 kB] Get:58 http://ftpmaster.internal/ubuntu eoan/main armhf libpam0g armhf 1.3.1-5ubuntu1 [50.5 kB] Get:59 http://ftpmaster.internal/ubuntu eoan/main armhf libsemanage-common all 2.8-2 [7016 B] Get:60 http://ftpmaster.internal/ubuntu eoan/main armhf libsemanage1 armhf 2.8-2 [72.7 kB] Get:61 http://ftpmaster.internal/ubuntu eoan/main armhf libpam-modules-bin armhf 1.3.1-5ubuntu1 [33.1 kB] Get:62 http://ftpmaster.internal/ubuntu eoan/main armhf libpam-modules armhf 1.3.1-5ubuntu1 [230 kB] Get:63 http://ftpmaster.internal/ubuntu eoan/main armhf passwd armhf 1:4.5-1.1ubuntu2 [768 kB] Get:64 http://ftpmaster.internal/ubuntu eoan/main armhf adduser all 3.118ubuntu1 [163 kB] Get:65 http://ftpmaster.internal/ubuntu eoan/main armhf libgpg-error0 armhf 1.35-1 [49.3 kB] Get:66 http://ftpmaster.internal/ubuntu eoan/main armhf gpgv armhf 2.2.12-1ubuntu3 [167 kB] Get:67 http://ftpmaster.internal/ubuntu eoan/main armhf apt armhf 1.8.0 [1159 kB] Get:68 http://ftpmaster.internal/ubuntu eoan/main armhf systemd-sysv armhf 240-6ubuntu5 [9384 B] Get:69 http://ftpmaster.internal/ubuntu eoan/main armhf libacl1 armhf 2.2.53-4 [15.8 kB] Get:70 http://ftpmaster.internal/ubuntu eoan/main armhf libapparmor1 armhf 2.13.2-9ubuntu6 [29.4 kB] Get:71 http://ftpmaster.internal/ubuntu eoan/main armhf libcap2 armhf 1:2.25-2 [12.1 kB] Get:72 http://ftpmaster.internal/ubuntu eoan/main armhf libargon2-1 armhf 0~20171227-0.2 [20.0 kB] Get:73 http://ftpmaster.internal/ubuntu eoan/main armhf libjson-c3 armhf 0.12.1+ds-2 [20.2 kB] Get:74 http://ftpmaster.internal/ubuntu eoan/main armhf libssl1.1 armhf 1.1.1b-1ubuntu2 [1064 kB] Get:75 http://ftpmaster.internal/ubuntu eoan/main armhf libcryptsetup12 armhf 2:2.1.0-1ubuntu1 [130 kB] Get:76 http://ftpmaster.internal/ubuntu eoan/main armhf libidn11 armhf 1.33-2.2ubuntu2 [43.1 kB] Get:77 http://ftpmaster.internal/ubuntu eoan/main armhf libkmod2 armhf 25-1ubuntu4 [35.6 kB] Get:78 http://ftpmaster.internal/ubuntu eoan/main armhf mount armhf 2.33.1-0.1ubuntu2 [105 kB] Get:79 http://ftpmaster.internal/ubuntu eoan/main armhf systemd armhf 240-6ubuntu5 [3151 kB] Get:80 http://ftpmaster.internal/ubuntu eoan/main armhf libsystemd0 armhf 240-6ubuntu5 [221 kB] Get:81 http://ftpmaster.internal/ubuntu eoan/main armhf libext2fs2 armhf 1.44.6-1 [146 kB] Get:82 http://ftpmaster.internal/ubuntu eoan/main armhf e2fsprogs armhf 1.44.6-1 [493 kB] Get:83 http://ftpmaster.internal/ubuntu eoan/main armhf init armhf 1.56+nmu1 [6080 B] Get:84 http://ftpmaster.internal/ubuntu eoan/main armhf libattr1 armhf 1:2.4.48-4 [11.3 kB] Get:85 http://ftpmaster.internal/ubuntu eoan/main armhf libcap-ng0 armhf 0.7.9-2 [9656 B] Get:86 http://ftpmaster.internal/ubuntu eoan/main armhf libpam-runtime all 1.3.1-5ubuntu1 [37.3 kB] Get:87 http://ftpmaster.internal/ubuntu eoan/main armhf libpcre3 armhf 2:8.39-12 [207 kB] Get:88 http://ftpmaster.internal/ubuntu eoan/main armhf libcom-err2 armhf 1.44.6-1 [8712 B] Get:89 http://ftpmaster.internal/ubuntu eoan/main armhf libprocps7 armhf 2:3.3.15-2ubuntu2 [29.8 kB] Get:90 http://ftpmaster.internal/ubuntu eoan/main armhf libss2 armhf 1.44.6-1 [9332 B] Get:91 http://ftpmaster.internal/ubuntu eoan/main armhf procps armhf 2:3.3.15-2ubuntu2 [219 kB] Get:92 http://ftpmaster.internal/ubuntu eoan/main armhf openssl armhf 1.1.1b-1ubuntu2 [593 kB] Get:93 http://ftpmaster.internal/ubuntu eoan/main armhf ca-certificates all 20190110 [146 kB] Get:94 http://ftpmaster.internal/ubuntu eoan/main armhf readline-common all 8.0-1 [53.4 kB] Get:95 http://ftpmaster.internal/ubuntu eoan/main armhf libreadline8 armhf 8.0-1 [108 kB] Get:96 http://ftpmaster.internal/ubuntu eoan/main armhf libsqlite3-0 armhf 3.27.2-2 [453 kB] Get:97 http://ftpmaster.internal/ubuntu eoan/main armhf tzdata all 2019a-1 [187 kB] Get:98 http://ftpmaster.internal/ubuntu eoan/main armhf xz-utils armhf 5.2.4-1 [80.6 kB] Get:99 http://ftpmaster.internal/ubuntu eoan/main armhf libpng16-16 armhf 1.6.36-6 [162 kB] Get:100 http://ftpmaster.internal/ubuntu eoan/main armhf multiarch-support armhf 2.29-0ubuntu2 [6912 B] Get:101 http://ftpmaster.internal/ubuntu eoan/main armhf binutils-arm-linux-gnueabihf armhf 2.32-7ubuntu4 [2164 kB] Get:102 http://ftpmaster.internal/ubuntu eoan/main armhf libbinutils armhf 2.32-7ubuntu4 [301 kB] Get:103 http://ftpmaster.internal/ubuntu eoan/main armhf binutils armhf 2.32-7ubuntu4 [3344 B] Get:104 http://ftpmaster.internal/ubuntu eoan/main armhf binutils-common armhf 2.32-7ubuntu4 [200 kB] Get:105 http://ftpmaster.internal/ubuntu eoan/main armhf libubsan1 armhf 9-20190420-1ubuntu1 [118 kB] Get:106 http://ftpmaster.internal/ubuntu eoan/main armhf libgomp1 armhf 9-20190420-1ubuntu1 [77.3 kB] Get:107 http://ftpmaster.internal/ubuntu eoan/main armhf libatomic1 armhf 9-20190420-1ubuntu1 [7080 B] Get:108 http://ftpmaster.internal/ubuntu eoan/main armhf libasan5 armhf 9-20190420-1ubuntu1 [386 kB] Get:109 http://ftpmaster.internal/ubuntu eoan/main armhf g++-8 armhf 8.3.0-6ubuntu1 [7796 kB] Get:110 http://ftpmaster.internal/ubuntu eoan/main armhf gcc-8 armhf 8.3.0-6ubuntu1 [7579 kB] Get:111 http://ftpmaster.internal/ubuntu eoan/main armhf libstdc++-8-dev armhf 8.3.0-6ubuntu1 [1608 kB] Get:112 http://ftpmaster.internal/ubuntu eoan/main armhf libgcc-8-dev armhf 8.3.0-6ubuntu1 [628 kB] Get:113 http://ftpmaster.internal/ubuntu eoan/main armhf libcc1-0 armhf 9-20190420-1ubuntu1 [41.7 kB] Get:114 http://ftpmaster.internal/ubuntu eoan/main armhf cpp-8 armhf 8.3.0-6ubuntu1 [6809 kB] Get:115 http://ftpmaster.internal/ubuntu eoan/main armhf gcc-8-base armhf 8.3.0-6ubuntu1 [18.7 kB] Get:116 http://ftpmaster.internal/ubuntu eoan/main armhf libmpfr6 armhf 4.0.2-1 [196 kB] Get:117 http://ftpmaster.internal/ubuntu eoan/main armhf g++ armhf 4:8.3.0-1ubuntu3 [1604 B] Get:118 http://ftpmaster.internal/ubuntu eoan/main armhf gcc armhf 4:8.3.0-1ubuntu3 [5228 B] Get:119 http://ftpmaster.internal/ubuntu eoan/main armhf cpp armhf 4:8.3.0-1ubuntu3 [27.6 kB] Get:120 http://ftpmaster.internal/ubuntu eoan/main armhf dpkg-dev all 1.19.6ubuntu1 [675 kB] Get:121 http://ftpmaster.internal/ubuntu eoan/main armhf libdpkg-perl all 1.19.6ubuntu1 [230 kB] Get:122 http://ftpmaster.internal/ubuntu eoan/main armhf build-essential armhf 12.6ubuntu1 [4664 B] Get:123 http://ftpmaster.internal/ubuntu eoan/main armhf e2fslibs armhf 1.44.6-1 [2700 B] Get:124 http://ftpmaster.internal/ubuntu eoan/main armhf libassuan0 armhf 2.5.2-1 [28.7 kB] Get:125 http://ftpmaster.internal/ubuntu eoan/main armhf gpg armhf 2.2.12-1ubuntu3 [415 kB] Get:126 http://ftpmaster.internal/ubuntu eoan/main armhf gpgconf armhf 2.2.12-1ubuntu3 [105 kB] Get:127 http://ftpmaster.internal/ubuntu eoan/main armhf gpg-agent armhf 2.2.12-1ubuntu3 [190 kB] Get:128 http://ftpmaster.internal/ubuntu eoan/main armhf libcomerr2 armhf 1.44.6-1 [2692 B] Get:129 http://ftpmaster.internal/ubuntu eoan/main armhf optipng armhf 0.7.7-1 [81.1 kB] Get:130 http://ftpmaster.internal/ubuntu eoan/main armhf pkgbinarymangler all 144 [55.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 63.9 MB in 8s (7875 kB/s) (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../libc6-dev_2.29-0ubuntu2_armhf.deb ... Unpacking libc6-dev:armhf (2.29-0ubuntu2) over (2.28-0ubuntu1) ... Preparing to unpack .../libc-dev-bin_2.29-0ubuntu2_armhf.deb ... Unpacking libc-dev-bin (2.29-0ubuntu2) over (2.28-0ubuntu1) ... Preparing to unpack .../linux-libc-dev_5.0.0-13.14_armhf.deb ... Unpacking linux-libc-dev:armhf (5.0.0-13.14) over (4.18.0-11.12) ... Preparing to unpack .../libc6_2.29-0ubuntu2_armhf.deb ... Unpacking libc6:armhf (2.29-0ubuntu2) over (2.28-0ubuntu1) ... Setting up libc6:armhf (2.29-0ubuntu2) ... (Reading database ... 12430 files and directories currently installed.) Preparing to unpack .../libc-bin_2.29-0ubuntu2_armhf.deb ... Unpacking libc-bin (2.29-0ubuntu2) over (2.28-0ubuntu1) ... Setting up libc-bin (2.29-0ubuntu2) ... Selecting previously unselected package gcc-9-base:armhf. (Reading database ... 12430 files and directories currently installed.) Preparing to unpack .../gcc-9-base_9-20190420-1ubuntu1_armhf.deb ... Unpacking gcc-9-base:armhf (9-20190420-1ubuntu1) ... Setting up gcc-9-base:armhf (9-20190420-1ubuntu1) ... (Reading database ... 12436 files and directories currently installed.) Preparing to unpack .../libgcc1_1%3a9-20190420-1ubuntu1_armhf.deb ... Unpacking libgcc1:armhf (1:9-20190420-1ubuntu1) over (1:8.2.0-12ubuntu1) ... Setting up libgcc1:armhf (1:9-20190420-1ubuntu1) ... (Reading database ... 12436 files and directories currently installed.) Preparing to unpack .../base-files_10.1ubuntu10_armhf.deb ... Unpacking base-files (10.1ubuntu10) over (10.1ubuntu8) ... Setting up base-files (10.1ubuntu10) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12436 files and directories currently installed.) Preparing to unpack .../debianutils_4.8.6.1_armhf.deb ... Unpacking debianutils (4.8.6.1) over (4.8.6) ... Setting up debianutils (4.8.6.1) ... (Reading database ... 12436 files and directories currently installed.) Preparing to unpack .../bash_5.0-3ubuntu1_armhf.deb ... Unpacking bash (5.0-3ubuntu1) over (4.4.18-2ubuntu3) ... Setting up bash (5.0-3ubuntu1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12436 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.33.1-0.1ubuntu2_armhf.deb ... Unpacking bsdutils (1:2.33.1-0.1ubuntu2) over (1:2.32-0.1ubuntu2) ... Setting up bsdutils (1:2.33.1-0.1ubuntu2) ... (Reading database ... 12436 files and directories currently installed.) Preparing to unpack .../coreutils_8.30-1ubuntu1_armhf.deb ... Unpacking coreutils (8.30-1ubuntu1) over (8.28-1ubuntu2) ... Setting up coreutils (8.30-1ubuntu1) ... (Reading database ... 12436 files and directories currently installed.) Preparing to unpack .../lsb-base_10.2019031300ubuntu1_all.deb ... Unpacking lsb-base (10.2019031300ubuntu1) over (9.20170808ubuntu1) ... Preparing to unpack .../tar_1.30+dfsg-5_armhf.deb ... Unpacking tar (1.30+dfsg-5) over (1.30+dfsg-3) ... Setting up tar (1.30+dfsg-5) ... (Reading database ... 12435 files and directories currently installed.) Preparing to unpack .../dpkg_1.19.6ubuntu1_armhf.deb ... Unpacking dpkg (1.19.6ubuntu1) over (1.19.2ubuntu1) ... Setting up dpkg (1.19.6ubuntu1) ... Installing new version of config file /etc/cron.daily/dpkg ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../libperl5.28_5.28.1-6_armhf.deb ... Unpacking libperl5.28:armhf (5.28.1-6) over (5.28.1-3) ... Preparing to unpack .../perl_5.28.1-6_armhf.deb ... Unpacking perl (5.28.1-6) over (5.28.1-3) ... Preparing to unpack .../perl-base_5.28.1-6_armhf.deb ... Unpacking perl-base (5.28.1-6) over (5.28.1-3) ... Setting up perl-base (5.28.1-6) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../perl-modules-5.28_5.28.1-6_all.deb ... Unpacking perl-modules-5.28 (5.28.1-6) over (5.28.1-3) ... Preparing to unpack .../libdb5.3_5.3.28+dfsg1-0.5_armhf.deb ... Unpacking libdb5.3:armhf (5.3.28+dfsg1-0.5) over (5.3.28+dfsg1-0.2) ... Setting up libdb5.3:armhf (5.3.28+dfsg1-0.5) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../libgdbm6_1.18.1-4_armhf.deb ... Unpacking libgdbm6:armhf (1.18.1-4) over (1.18.1-2) ... Preparing to unpack .../libgdbm-compat4_1.18.1-4_armhf.deb ... Unpacking libgdbm-compat4:armhf (1.18.1-4) over (1.18.1-2) ... Preparing to unpack .../zlib1g_1%3a1.2.11.dfsg-1ubuntu2_armhf.deb ... Unpacking zlib1g:armhf (1:1.2.11.dfsg-1ubuntu2) over (1:1.2.11.dfsg-0ubuntu2) ... Setting up zlib1g:armhf (1:1.2.11.dfsg-1ubuntu2) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../debconf_1.5.71_all.deb ... Unpacking debconf (1.5.71) over (1.5.69) ... Setting up debconf (1.5.71) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../dash_0.5.10.2-4ubuntu1_armhf.deb ... Unpacking dash (0.5.10.2-4ubuntu1) over (0.5.10.2-2) ... Setting up dash (0.5.10.2-4ubuntu1) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../diffutils_1%3a3.7-2_armhf.deb ... Unpacking diffutils (1:3.7-2) over (1:3.6-1) ... Setting up diffutils (1:3.7-2) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../findutils_4.6.0+git+20190209-2_armhf.deb ... Unpacking findutils (4.6.0+git+20190209-2) over (4.6.0+git+20181018-1) ... Setting up findutils (4.6.0+git+20190209-2) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../archives/grep_3.3-1_armhf.deb ... Unpacking grep (3.3-1) over (3.1-3) ... Setting up grep (3.3-1) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../archives/gzip_1.9-3_armhf.deb ... Unpacking gzip (1.9-3) over (1.6-5ubuntu2) ... Setting up gzip (1.9-3) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.33.1-0.1ubuntu2_armhf.deb ... Unpacking libsmartcols1:armhf (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Setting up libsmartcols1:armhf (2.33.1-0.1ubuntu2) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../libuuid1_2.33.1-0.1ubuntu2_armhf.deb ... Unpacking libuuid1:armhf (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Setting up libuuid1:armhf (2.33.1-0.1ubuntu2) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../libblkid1_2.33.1-0.1ubuntu2_armhf.deb ... Unpacking libblkid1:armhf (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Setting up libblkid1:armhf (2.33.1-0.1ubuntu2) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../libfdisk1_2.33.1-0.1ubuntu2_armhf.deb ... Unpacking libfdisk1:armhf (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Setting up libfdisk1:armhf (2.33.1-0.1ubuntu2) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../libmount1_2.33.1-0.1ubuntu2_armhf.deb ... Unpacking libmount1:armhf (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Setting up libmount1:armhf (2.33.1-0.1ubuntu2) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../libncurses6_6.1+20181013-2ubuntu2_armhf.deb ... Unpacking libncurses6:armhf (6.1+20181013-2ubuntu2) over (6.1+20180210-4ubuntu1) ... Preparing to unpack .../libtinfo6_6.1+20181013-2ubuntu2_armhf.deb ... Unpacking libtinfo6:armhf (6.1+20181013-2ubuntu2) over (6.1+20180210-4ubuntu1) ... Setting up libtinfo6:armhf (6.1+20181013-2ubuntu2) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.1+20181013-2ubuntu2_armhf.deb ... Unpacking libncursesw6:armhf (6.1+20181013-2ubuntu2) over (6.1+20180210-4ubuntu1) ... Setting up libncursesw6:armhf (6.1+20181013-2ubuntu2) ... (Reading database ... 12443 files and directories currently installed.) Preparing to unpack .../fdisk_2.33.1-0.1ubuntu2_armhf.deb ... Unpacking fdisk (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Setting up fdisk (2.33.1-0.1ubuntu2) ... (Reading database ... 12446 files and directories currently installed.) Preparing to unpack .../util-linux_2.33.1-0.1ubuntu2_armhf.deb ... Unpacking util-linux (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Replacing files in old package login (1:4.5-1ubuntu1) ... Preparing to unpack .../login_1%3a4.5-1.1ubuntu2_armhf.deb ... Unpacking login (1:4.5-1.1ubuntu2) over (1:4.5-1ubuntu1) ... Setting up login (1:4.5-1.1ubuntu2) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.1+20181013-2ubuntu2_armhf.deb ... Unpacking ncurses-bin (6.1+20181013-2ubuntu2) over (6.1+20180210-4ubuntu1) ... Setting up ncurses-bin (6.1+20181013-2ubuntu2) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../archives/sed_4.7-1_armhf.deb ... Unpacking sed (4.7-1) over (4.5-2) ... Setting up sed (4.7-1) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.247ubuntu1_armhf.deb ... Unpacking libdebconfclient0:armhf (0.247ubuntu1) over (0.244ubuntu1) ... Setting up libdebconfclient0:armhf (0.247ubuntu1) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../base-passwd_3.5.46_armhf.deb ... Unpacking base-passwd (3.5.46) over (3.5.45) ... Setting up base-passwd (3.5.46) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.56+nmu1_all.deb ... Unpacking init-system-helpers (1.56+nmu1) over (1.56) ... Setting up init-system-helpers (1.56+nmu1) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.1+20181013-2ubuntu2_all.deb ... Unpacking ncurses-base (6.1+20181013-2ubuntu2) over (6.1+20180210-4ubuntu1) ... Setting up ncurses-base (6.1+20181013-2ubuntu2) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libnettle6_3.4.1-1_armhf.deb ... Unpacking libnettle6:armhf (3.4.1-1) over (3.4.1~rc1-1) ... Setting up libnettle6:armhf (3.4.1-1) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libhogweed4_3.4.1-1_armhf.deb ... Unpacking libhogweed4:armhf (3.4.1-1) over (3.4.1~rc1-1) ... Setting up libhogweed4:armhf (3.4.1-1) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.23.15-2_armhf.deb ... Unpacking libp11-kit0:armhf (0.23.15-2) over (0.23.14-2) ... Setting up libp11-kit0:armhf (0.23.15-2) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libunistring2_0.9.10-1ubuntu2_armhf.deb ... Unpacking libunistring2:armhf (0.9.10-1ubuntu2) over (0.9.10-1ubuntu1) ... Setting up libunistring2:armhf (0.9.10-1ubuntu2) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.6.5-2ubuntu1_armhf.deb ... Unpacking libgnutls30:armhf (3.6.5-2ubuntu1) over (3.6.4-2ubuntu2) ... Setting up libgnutls30:armhf (3.6.5-2ubuntu1) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../liblz4-1_1.8.3-1ubuntu1_armhf.deb ... Unpacking liblz4-1:armhf (1.8.3-1ubuntu1) over (1.8.2-1ubuntu1) ... Setting up liblz4-1:armhf (1.8.3-1ubuntu1) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../liblzma5_5.2.4-1_armhf.deb ... Unpacking liblzma5:armhf (5.2.4-1) over (5.2.2-1.3) ... Setting up liblzma5:armhf (5.2.4-1) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libstdc++6_9-20190420-1ubuntu1_armhf.deb ... Unpacking libstdc++6:armhf (9-20190420-1ubuntu1) over (8.2.0-12ubuntu1) ... Setting up libstdc++6:armhf (9-20190420-1ubuntu1) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libudev1_240-6ubuntu5_armhf.deb ... Unpacking libudev1:armhf (240-6ubuntu5) over (239-7ubuntu15) ... Setting up libudev1:armhf (240-6ubuntu5) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libzstd1_1.3.8+dfsg-3_armhf.deb ... Unpacking libzstd1:armhf (1.3.8+dfsg-3) over (1.3.5+dfsg-1ubuntu1) ... Setting up libzstd1:armhf (1.3.8+dfsg-3) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libapt-pkg5.0_1.8.0_armhf.deb ... Unpacking libapt-pkg5.0:armhf (1.8.0) over (1.8.0~alpha2ubuntu1) ... Setting up libapt-pkg5.0:armhf (1.8.0) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libpam0g_1.3.1-5ubuntu1_armhf.deb ... Unpacking libpam0g:armhf (1.3.1-5ubuntu1) over (1.1.8-3.6ubuntu2) ... Setting up libpam0g:armhf (1.3.1-5ubuntu1) ... Checking for services that may need to be restarted...Checking init scripts... Nothing to restart. (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libsemanage-common_2.8-2_all.deb ... Unpacking libsemanage-common (2.8-2) over (2.8-1build2) ... Setting up libsemanage-common (2.8-2) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libsemanage1_2.8-2_armhf.deb ... Unpacking libsemanage1:armhf (2.8-2) over (2.8-1build2) ... Setting up libsemanage1:armhf (2.8-2) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.3.1-5ubuntu1_armhf.deb ... Unpacking libpam-modules-bin (1.3.1-5ubuntu1) over (1.1.8-3.6ubuntu2) ... Setting up libpam-modules-bin (1.3.1-5ubuntu1) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.3.1-5ubuntu1_armhf.deb ... Unpacking libpam-modules:armhf (1.3.1-5ubuntu1) over (1.1.8-3.6ubuntu2) ... Setting up libpam-modules:armhf (1.3.1-5ubuntu1) ... Installing new version of config file /etc/security/access.conf ... Installing new version of config file /etc/security/limits.conf ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.5-1.1ubuntu2_armhf.deb ... Unpacking passwd (1:4.5-1.1ubuntu2) over (1:4.5-1ubuntu1) ... Setting up passwd (1:4.5-1.1ubuntu2) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../adduser_3.118ubuntu1_all.deb ... Unpacking adduser (3.118ubuntu1) over (3.117ubuntu1) ... Setting up adduser (3.118ubuntu1) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.35-1_armhf.deb ... Unpacking libgpg-error0:armhf (1.35-1) over (1.32-3) ... Setting up libgpg-error0:armhf (1.35-1) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.12-1ubuntu3_armhf.deb ... Unpacking gpgv (2.2.12-1ubuntu3) over (2.2.8-3ubuntu1) ... Setting up gpgv (2.2.12-1ubuntu3) ... (Reading database ... 12450 files and directories currently installed.) Preparing to unpack .../archives/apt_1.8.0_armhf.deb ... Unpacking apt (1.8.0) over (1.8.0~alpha2ubuntu1) ... Setting up apt (1.8.0) ... (Reading database ... 12462 files and directories currently installed.) Preparing to unpack .../systemd-sysv_240-6ubuntu5_armhf.deb ... Unpacking systemd-sysv (240-6ubuntu5) over (239-7ubuntu15) ... Preparing to unpack .../libacl1_2.2.53-4_armhf.deb ... Unpacking libacl1:armhf (2.2.53-4) over (2.2.52-3build1) ... Setting up libacl1:armhf (2.2.53-4) ... (Reading database ... 12462 files and directories currently installed.) Preparing to unpack .../00-libapparmor1_2.13.2-9ubuntu6_armhf.deb ... Unpacking libapparmor1:armhf (2.13.2-9ubuntu6) over (2.12-4ubuntu10) ... Preparing to unpack .../01-libcap2_1%3a2.25-2_armhf.deb ... Unpacking libcap2:armhf (1:2.25-2) over (1:2.25-1.2) ... Preparing to unpack .../02-libargon2-1_0~20171227-0.2_armhf.deb ... Unpacking libargon2-1:armhf (0~20171227-0.2) over (0~20171227-0.1) ... Preparing to unpack .../03-libjson-c3_0.12.1+ds-2_armhf.deb ... Unpacking libjson-c3:armhf (0.12.1+ds-2) over (0.12.1-1.3) ... Preparing to unpack .../04-libssl1.1_1.1.1b-1ubuntu2_armhf.deb ... Unpacking libssl1.1:armhf (1.1.1b-1ubuntu2) over (1.1.1a-1ubuntu2) ... Preparing to unpack .../05-libcryptsetup12_2%3a2.1.0-1ubuntu1_armhf.deb ... Unpacking libcryptsetup12:armhf (2:2.1.0-1ubuntu1) over (2:2.0.4-2ubuntu2) ... Preparing to unpack .../06-libidn11_1.33-2.2ubuntu2_armhf.deb ... Unpacking libidn11:armhf (1.33-2.2ubuntu2) over (1.33-2.2ubuntu1) ... Preparing to unpack .../07-libkmod2_25-1ubuntu4_armhf.deb ... Unpacking libkmod2:armhf (25-1ubuntu4) over (25-1ubuntu2) ... Preparing to unpack .../08-mount_2.33.1-0.1ubuntu2_armhf.deb ... Unpacking mount (2.33.1-0.1ubuntu2) over (2.32-0.1ubuntu2) ... Preparing to unpack .../09-systemd_240-6ubuntu5_armhf.deb ... Unpacking systemd (240-6ubuntu5) over (239-7ubuntu15) ... Preparing to unpack .../10-libsystemd0_240-6ubuntu5_armhf.deb ... Unpacking libsystemd0:armhf (240-6ubuntu5) over (239-7ubuntu15) ... Setting up libsystemd0:armhf (240-6ubuntu5) ... (Reading database ... 12478 files and directories currently installed.) Preparing to unpack .../libext2fs2_1.44.6-1_armhf.deb ... Unpacking libext2fs2:armhf (1.44.6-1) over (1.44.4-2ubuntu1) ... Setting up libext2fs2:armhf (1.44.6-1) ... (Reading database ... 12477 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.44.6-1_armhf.deb ... Unpacking e2fsprogs (1.44.6-1) over (1.44.4-2ubuntu1) ... Setting up libapparmor1:armhf (2.13.2-9ubuntu6) ... Setting up libcap2:armhf (1:2.25-2) ... Setting up libargon2-1:armhf (0~20171227-0.2) ... Setting up libjson-c3:armhf (0.12.1+ds-2) ... Setting up libssl1.1:armhf (1.1.1b-1ubuntu2) ... Setting up libcryptsetup12:armhf (2:2.1.0-1ubuntu1) ... Setting up libidn11:armhf (1.33-2.2ubuntu2) ... Setting up libkmod2:armhf (25-1ubuntu4) ... Setting up util-linux (2.33.1-0.1ubuntu2) ... Setting up mount (2.33.1-0.1ubuntu2) ... Setting up systemd (240-6ubuntu5) ... Installing new version of config file /etc/systemd/journald.conf ... Installing new version of config file /etc/systemd/resolved.conf ... Installing new version of config file /etc/systemd/system.conf ... Setting up systemd-sysv (240-6ubuntu5) ... (Reading database ... 12477 files and directories currently installed.) Preparing to unpack .../init_1.56+nmu1_armhf.deb ... Unpacking init (1.56+nmu1) over (1.56) ... Preparing to unpack .../libattr1_1%3a2.4.48-4_armhf.deb ... Unpacking libattr1:armhf (1:2.4.48-4) over (1:2.4.47-2build1) ... Setting up libattr1:armhf (1:2.4.48-4) ... (Reading database ... 12478 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.7.9-2_armhf.deb ... Unpacking libcap-ng0:armhf (0.7.9-2) over (0.7.9-1build1) ... Setting up libcap-ng0:armhf (0.7.9-2) ... (Reading database ... 12478 files and directories currently installed.) Preparing to unpack .../libpam-runtime_1.3.1-5ubuntu1_all.deb ... Unpacking libpam-runtime (1.3.1-5ubuntu1) over (1.1.8-3.6ubuntu2) ... Setting up libpam-runtime (1.3.1-5ubuntu1) ... (Reading database ... 12478 files and directories currently installed.) Preparing to unpack .../libpcre3_2%3a8.39-12_armhf.deb ... Unpacking libpcre3:armhf (2:8.39-12) over (2:8.39-11) ... Setting up libpcre3:armhf (2:8.39-12) ... (Reading database ... 12478 files and directories currently installed.) Preparing to unpack .../00-libcom-err2_1.44.6-1_armhf.deb ... Unpacking libcom-err2:armhf (1.44.6-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../01-libprocps7_2%3a3.3.15-2ubuntu2_armhf.deb ... Unpacking libprocps7:armhf (2:3.3.15-2ubuntu2) over (2:3.3.15-2ubuntu1) ... Preparing to unpack .../02-libss2_1.44.6-1_armhf.deb ... Unpacking libss2:armhf (1.44.6-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../03-procps_2%3a3.3.15-2ubuntu2_armhf.deb ... Unpacking procps (2:3.3.15-2ubuntu2) over (2:3.3.15-2ubuntu1) ... Preparing to unpack .../04-openssl_1.1.1b-1ubuntu2_armhf.deb ... Unpacking openssl (1.1.1b-1ubuntu2) over (1.1.1a-1ubuntu2) ... Preparing to unpack .../05-ca-certificates_20190110_all.deb ... Unpacking ca-certificates (20190110) over (20180409) ... Preparing to unpack .../06-readline-common_8.0-1_all.deb ... Unpacking readline-common (8.0-1) over (7.0-5) ... Selecting previously unselected package libreadline8:armhf. Preparing to unpack .../07-libreadline8_8.0-1_armhf.deb ... Unpacking libreadline8:armhf (8.0-1) ... Preparing to unpack .../08-libsqlite3-0_3.27.2-2_armhf.deb ... Unpacking libsqlite3-0:armhf (3.27.2-2) over (3.26.0-2) ... Preparing to unpack .../09-tzdata_2019a-1_all.deb ... Unpacking tzdata (2019a-1) over (2018g-1) ... Preparing to unpack .../10-xz-utils_5.2.4-1_armhf.deb ... Unpacking xz-utils (5.2.4-1) over (5.2.2-1.3) ... Preparing to unpack .../11-libpng16-16_1.6.36-6_armhf.deb ... Unpacking libpng16-16:armhf (1.6.36-6) over (1.6.34-2) ... Preparing to unpack .../12-multiarch-support_2.29-0ubuntu2_armhf.deb ... Unpacking multiarch-support (2.29-0ubuntu2) over (2.28-0ubuntu1) ... Preparing to unpack .../13-binutils-arm-linux-gnueabihf_2.32-7ubuntu4_armhf.deb ... Unpacking binutils-arm-linux-gnueabihf (2.32-7ubuntu4) over (2.31.1-10ubuntu1) ... Preparing to unpack .../14-libbinutils_2.32-7ubuntu4_armhf.deb ... Unpacking libbinutils:armhf (2.32-7ubuntu4) over (2.31.1-10ubuntu1) ... Preparing to unpack .../15-binutils_2.32-7ubuntu4_armhf.deb ... Unpacking binutils (2.32-7ubuntu4) over (2.31.1-10ubuntu1) ... Preparing to unpack .../16-binutils-common_2.32-7ubuntu4_armhf.deb ... Unpacking binutils-common:armhf (2.32-7ubuntu4) over (2.31.1-10ubuntu1) ... Preparing to unpack .../17-libubsan1_9-20190420-1ubuntu1_armhf.deb ... Unpacking libubsan1:armhf (9-20190420-1ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../18-libgomp1_9-20190420-1ubuntu1_armhf.deb ... Unpacking libgomp1:armhf (9-20190420-1ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../19-libatomic1_9-20190420-1ubuntu1_armhf.deb ... Unpacking libatomic1:armhf (9-20190420-1ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../20-libasan5_9-20190420-1ubuntu1_armhf.deb ... Unpacking libasan5:armhf (9-20190420-1ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../21-g++-8_8.3.0-6ubuntu1_armhf.deb ... Unpacking g++-8 (8.3.0-6ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../22-gcc-8_8.3.0-6ubuntu1_armhf.deb ... Unpacking gcc-8 (8.3.0-6ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../23-libstdc++-8-dev_8.3.0-6ubuntu1_armhf.deb ... Unpacking libstdc++-8-dev:armhf (8.3.0-6ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../24-libgcc-8-dev_8.3.0-6ubuntu1_armhf.deb ... Unpacking libgcc-8-dev:armhf (8.3.0-6ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../25-libcc1-0_9-20190420-1ubuntu1_armhf.deb ... Unpacking libcc1-0:armhf (9-20190420-1ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../26-cpp-8_8.3.0-6ubuntu1_armhf.deb ... Unpacking cpp-8 (8.3.0-6ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../27-gcc-8-base_8.3.0-6ubuntu1_armhf.deb ... Unpacking gcc-8-base:armhf (8.3.0-6ubuntu1) over (8.2.0-12ubuntu1) ... Preparing to unpack .../28-libmpfr6_4.0.2-1_armhf.deb ... Unpacking libmpfr6:armhf (4.0.2-1) over (4.0.1-2) ... Preparing to unpack .../29-g++_4%3a8.3.0-1ubuntu3_armhf.deb ... Unpacking g++ (4:8.3.0-1ubuntu3) over (4:8.2.0-2ubuntu2) ... Preparing to unpack .../30-gcc_4%3a8.3.0-1ubuntu3_armhf.deb ... Unpacking gcc (4:8.3.0-1ubuntu3) over (4:8.2.0-2ubuntu2) ... Preparing to unpack .../31-cpp_4%3a8.3.0-1ubuntu3_armhf.deb ... Unpacking cpp (4:8.3.0-1ubuntu3) over (4:8.2.0-2ubuntu2) ... Preparing to unpack .../32-dpkg-dev_1.19.6ubuntu1_all.deb ... Unpacking dpkg-dev (1.19.6ubuntu1) over (1.19.2ubuntu1) ... Preparing to unpack .../33-libdpkg-perl_1.19.6ubuntu1_all.deb ... Unpacking libdpkg-perl (1.19.6ubuntu1) over (1.19.2ubuntu1) ... Preparing to unpack .../34-build-essential_12.6ubuntu1_armhf.deb ... Unpacking build-essential (12.6ubuntu1) over (12.5ubuntu2) ... Preparing to unpack .../35-e2fslibs_1.44.6-1_armhf.deb ... Unpacking e2fslibs:armhf (1.44.6-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../36-libassuan0_2.5.2-1_armhf.deb ... Unpacking libassuan0:armhf (2.5.2-1) over (2.5.1-2) ... Preparing to unpack .../37-gpg_2.2.12-1ubuntu3_armhf.deb ... Unpacking gpg (2.2.12-1ubuntu3) over (2.2.8-3ubuntu1) ... Preparing to unpack .../38-gpgconf_2.2.12-1ubuntu3_armhf.deb ... Unpacking gpgconf (2.2.12-1ubuntu3) over (2.2.8-3ubuntu1) ... Preparing to unpack .../39-gpg-agent_2.2.12-1ubuntu3_armhf.deb ... Unpacking gpg-agent (2.2.12-1ubuntu3) over (2.2.8-3ubuntu1) ... Preparing to unpack .../40-libcomerr2_1.44.6-1_armhf.deb ... Unpacking libcomerr2:armhf (1.44.6-1) over (1.44.4-2ubuntu1) ... Preparing to unpack .../41-optipng_0.7.7-1_armhf.deb ... Unpacking optipng (0.7.7-1) over (0.7.6-1.1) ... Preparing to unpack .../42-pkgbinarymangler_144_all.deb ... Unpacking pkgbinarymangler (144) over (143) ... Setting up perl-modules-5.28 (5.28.1-6) ... Setting up lsb-base (10.2019031300ubuntu1) ... Setting up e2fslibs:armhf (1.44.6-1) ... Setting up init (1.56+nmu1) ... Setting up libprocps7:armhf (2:3.3.15-2ubuntu2) ... Setting up libsqlite3-0:armhf (3.27.2-2) ... Setting up binutils-common:armhf (2.32-7ubuntu4) ... Setting up linux-libc-dev:armhf (5.0.0-13.14) ... Setting up libcom-err2:armhf (1.44.6-1) ... Setting up libassuan0:armhf (2.5.2-1) ... Setting up libgomp1:armhf (9-20190420-1ubuntu1) ... Setting up tzdata (2019a-1) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Apr 21 11:21:07 UTC 2019. Universal Time is now: Sun Apr 21 11:21:07 UTC 2019. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libasan5:armhf (9-20190420-1ubuntu1) ... Setting up multiarch-support (2.29-0ubuntu2) ... Setting up libmpfr6:armhf (4.0.2-1) ... Setting up libncurses6:armhf (6.1+20181013-2ubuntu2) ... Setting up xz-utils (5.2.4-1) ... Setting up libpng16-16:armhf (1.6.36-6) ... Setting up libatomic1:armhf (9-20190420-1ubuntu1) ... Setting up libss2:armhf (1.44.6-1) ... Setting up gcc-8-base:armhf (8.3.0-6ubuntu1) ... Setting up libubsan1:armhf (9-20190420-1ubuntu1) ... Setting up libcomerr2:armhf (1.44.6-1) ... Setting up procps (2:3.3.15-2ubuntu2) ... Installing new version of config file /etc/sysctl.d/10-network-security.conf ... Setting up libbinutils:armhf (2.32-7ubuntu4) ... Setting up cpp-8 (8.3.0-6ubuntu1) ... Setting up libc-dev-bin (2.29-0ubuntu2) ... Setting up openssl (1.1.1b-1ubuntu2) ... Installing new version of config file /etc/ssl/openssl.cnf ... Setting up binutils-arm-linux-gnueabihf (2.32-7ubuntu4) ... Setting up readline-common (8.0-1) ... Setting up libcc1-0:armhf (9-20190420-1ubuntu1) ... Setting up libgdbm6:armhf (1.18.1-4) ... Setting up libreadline8:armhf (8.0-1) ... Setting up e2fsprogs (1.44.6-1) ... Setting up binutils (2.32-7ubuntu4) ... Setting up ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 2 added, 7 removed; done. Setting up optipng (0.7.7-1) ... Setting up libgdbm-compat4:armhf (1.18.1-4) ... Setting up libgcc-8-dev:armhf (8.3.0-6ubuntu1) ... Setting up libperl5.28:armhf (5.28.1-6) ... Setting up cpp (4:8.3.0-1ubuntu3) ... Setting up gpgconf (2.2.12-1ubuntu3) ... Setting up libc6-dev:armhf (2.29-0ubuntu2) ... Setting up gpg (2.2.12-1ubuntu3) ... Setting up libstdc++-8-dev:armhf (8.3.0-6ubuntu1) ... Setting up gcc-8 (8.3.0-6ubuntu1) ... Setting up gpg-agent (2.2.12-1ubuntu3) ... Setting up pkgbinarymangler (144) ... Setting up gcc (4:8.3.0-1ubuntu3) ... Setting up perl (5.28.1-6) ... Setting up libdpkg-perl (1.19.6ubuntu1) ... Setting up g++-8 (8.3.0-6ubuntu1) ... Setting up dpkg-dev (1.19.6ubuntu1) ... Setting up g++ (4:8.3.0-1ubuntu3) ... Setting up build-essential (12.6ubuntu1) ... Processing triggers for systemd (240-6ubuntu5) ... Processing triggers for libc-bin (2.29-0ubuntu2) ... Processing triggers for ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-16663214 armhf eoan -c chroot:build-PACKAGEBUILD-16663214 --arch=armhf --dist=eoan --nolog gatb-core_1.4.1+git20181225.44d5a44+dfsg-1.dsc Initiating build PACKAGEBUILD-16663214 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-145-generic #171-Ubuntu SMP Tue Mar 26 12:45:17 UTC 2019 armv7l sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-061.buildd +==============================================================================+ | gatb-core 1.4.1+git20181225.44d5a44+dfsg-1 (armhf) 21 Apr 2019 11:21 | +==============================================================================+ Package: gatb-core Version: 1.4.1+git20181225.44d5a44+dfsg-1 Source Version: 1.4.1+git20181225.44d5a44+dfsg-1 Distribution: eoan Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf I: NOTICE: Log filtering will replace 'build/gatb-core-TVhrAl/gatb-core-1.4.1+git20181225.44d5a44+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/gatb-core-TVhrAl' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-16663214/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- gatb-core_1.4.1+git20181225.44d5a44+dfsg-1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-yQty4a/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-yQty4a/apt_archive ./ InRelease Get:2 copy:/<>/resolver-yQty4a/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-yQty4a/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-yQty4a/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-yQty4a/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (124 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-yQty4a/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12526 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 12~), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz Filtered Build-Depends: debhelper (>= 12~), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz dpkg-deb: building package 'sbuild-build-depends-gatb-core-dummy' in '/<>/resolver-ir_z0j/apt_archive/sbuild-build-depends-gatb-core-dummy.deb'. Ign:1 copy:/<>/resolver-ir_z0j/apt_archive ./ InRelease Get:2 copy:/<>/resolver-ir_z0j/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-ir_z0j/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-ir_z0j/apt_archive ./ Sources [266 B] Get:5 copy:/<>/resolver-ir_z0j/apt_archive ./ Packages [587 B] Fetched 2972 B in 0s (119 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install gatb-core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libarchive-zip-perl libarchive13 libasn1-8-heimdal libboost-dev libboost1.67-dev libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-7 libcppunit-1.14-0 libcppunit-dev libcroco3 libcurl4 libdatrie1 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhcrypto4-heimdal libhdf5-103 libhdf5-cpp-103 libhdf5-dev libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu63 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjsoncpp-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblab-gamut1 libldap-2.4-2 libldap-common libllvm7 libltdl7 libmagic-mgc libmagic1 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpsl5 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh-4 libsz2 libthai-data libthai0 libtiff5 libtool libuchardet0 libuv1 libwebp6 libwind0-heimdal libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 m4 man-db po-debconf ucf x11-common zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make doxygen-latex doxygen-doc doxygen-gui gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff lrzip libboost-doc libboost1.67-doc libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev libboost-context1.67-dev libboost-coroutine1.67-dev libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev libboost-filesystem1.67-dev libboost-graph1.67-dev libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev libboost-program-options1.67-dev libboost-python1.67-dev libboost-random1.67-dev libboost-regex1.67-dev libboost-serialization1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev libcppunit-doc libgd-tools krb5-doc krb5-user libhdf5-doc libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx fonts-liberation libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgts-bin krb5-locales publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libarchive-zip-perl libarchive13 libasn1-8-heimdal libboost-dev libboost1.67-dev libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-7 libcppunit-1.14-0 libcppunit-dev libcroco3 libcurl4 libdatrie1 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhcrypto4-heimdal libhdf5-103 libhdf5-cpp-103 libhdf5-dev libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu63 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjsoncpp-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblab-gamut1 libldap-2.4-2 libldap-common libllvm7 libltdl7 libmagic-mgc libmagic1 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpsl5 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh-4 libsz2 libthai-data libthai0 libtiff5 libtool libuchardet0 libuv1 libwebp6 libwind0-heimdal libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 m4 man-db po-debconf sbuild-build-depends-gatb-core-dummy ucf x11-common zlib1g-dev 0 upgraded, 133 newly installed, 0 to remove and 0 not upgraded. Need to get 62.6 MB of archives. After this operation, 339 MB of additional disk space will be used. Get:1 copy:/<>/resolver-ir_z0j/apt_archive ./ sbuild-build-depends-gatb-core-dummy 0.invalid.0 [912 B] Get:2 http://ftpmaster.internal/ubuntu eoan/main armhf libxau6 armhf 1:1.0.8-1 [7324 B] Get:3 http://ftpmaster.internal/ubuntu eoan/main armhf libbsd0 armhf 0.9.1-2 [48.4 kB] Get:4 http://ftpmaster.internal/ubuntu eoan/main armhf libxdmcp6 armhf 1:1.1.2-3 [9316 B] Get:5 http://ftpmaster.internal/ubuntu eoan/main armhf libxcb1 armhf 1.13.1-2 [40.8 kB] Get:6 http://ftpmaster.internal/ubuntu eoan/main armhf libx11-data all 2:1.6.7-1 [113 kB] Get:7 http://ftpmaster.internal/ubuntu eoan/main armhf libx11-6 armhf 2:1.6.7-1 [515 kB] Get:8 http://ftpmaster.internal/ubuntu eoan/main armhf libxext6 armhf 2:1.3.3-1 [25.1 kB] Get:9 http://ftpmaster.internal/ubuntu eoan/main armhf bsdmainutils armhf 11.1.2ubuntu2 [176 kB] Get:10 http://ftpmaster.internal/ubuntu eoan/main armhf libuchardet0 armhf 0.0.6-3 [62.1 kB] Get:11 http://ftpmaster.internal/ubuntu eoan/main armhf groff-base armhf 1.22.4-3 [772 kB] Get:12 http://ftpmaster.internal/ubuntu eoan/main armhf libpipeline1 armhf 1.5.1-2 [21.6 kB] Get:13 http://ftpmaster.internal/ubuntu eoan/main armhf man-db armhf 2.8.5-2 [1068 kB] Get:14 http://ftpmaster.internal/ubuntu eoan/main armhf libmagic-mgc armhf 1:5.35-4 [200 kB] Get:15 http://ftpmaster.internal/ubuntu eoan/main armhf libmagic1 armhf 1:5.35-4 [66.8 kB] Get:16 http://ftpmaster.internal/ubuntu eoan/main armhf file armhf 1:5.35-4 [22.0 kB] Get:17 http://ftpmaster.internal/ubuntu eoan/main armhf libelf1 armhf 0.176-1 [40.9 kB] Get:18 http://ftpmaster.internal/ubuntu eoan/main armhf libexpat1 armhf 2.2.6-1 [60.1 kB] Get:19 http://ftpmaster.internal/ubuntu eoan/main armhf libfribidi0 armhf 1.0.5-3.1 [24.3 kB] Get:20 http://ftpmaster.internal/ubuntu eoan/main armhf libglib2.0-0 armhf 2.60.0-1 [1078 kB] Get:21 http://ftpmaster.internal/ubuntu eoan/main armhf libicu63 armhf 63.1-6 [7992 kB] Get:22 http://ftpmaster.internal/ubuntu eoan/main armhf libxml2 armhf 2.9.4+dfsg1-7ubuntu3 [533 kB] Get:23 http://ftpmaster.internal/ubuntu eoan/main armhf ucf all 3.0038+nmu1 [51.6 kB] Get:24 http://ftpmaster.internal/ubuntu eoan/main armhf gettext-base armhf 0.19.8.1-9 [46.0 kB] Get:25 http://ftpmaster.internal/ubuntu eoan/main armhf libedit2 armhf 3.1-20181209-1 [71.3 kB] Get:26 http://ftpmaster.internal/ubuntu eoan/main armhf libkrb5support0 armhf 1.17-1 [30.0 kB] Get:27 http://ftpmaster.internal/ubuntu eoan/main armhf libk5crypto3 armhf 1.17-1 [83.8 kB] Get:28 http://ftpmaster.internal/ubuntu eoan/main armhf libkeyutils1 armhf 1.6-6 [9028 B] Get:29 http://ftpmaster.internal/ubuntu eoan/main armhf libkrb5-3 armhf 1.17-1 [286 kB] Get:30 http://ftpmaster.internal/ubuntu eoan/main armhf libgssapi-krb5-2 armhf 1.17-1 [101 kB] Get:31 http://ftpmaster.internal/ubuntu eoan/main armhf libpsl5 armhf 0.20.2-2 [48.7 kB] Get:32 http://ftpmaster.internal/ubuntu eoan/main armhf libsigsegv2 armhf 2.12-2 [13.1 kB] Get:33 http://ftpmaster.internal/ubuntu eoan/main armhf m4 armhf 1.4.18-2 [186 kB] Get:34 http://ftpmaster.internal/ubuntu eoan/main armhf autoconf all 2.69-11 [322 kB] Get:35 http://ftpmaster.internal/ubuntu eoan/main armhf autotools-dev all 20180224.1 [39.6 kB] Get:36 http://ftpmaster.internal/ubuntu eoan/main armhf automake all 1:1.16.1-4ubuntu3 [522 kB] Get:37 http://ftpmaster.internal/ubuntu eoan/main armhf autopoint all 0.19.8.1-9 [412 kB] Get:38 http://ftpmaster.internal/ubuntu eoan/main armhf cmake-data all 3.13.4-1 [1458 kB] Get:39 http://ftpmaster.internal/ubuntu eoan/main armhf libarchive13 armhf 3.3.3-4 [269 kB] Get:40 http://ftpmaster.internal/ubuntu eoan/main armhf libroken18-heimdal armhf 7.5.0+dfsg-2.1 [34.0 kB] Get:41 http://ftpmaster.internal/ubuntu eoan/main armhf libasn1-8-heimdal armhf 7.5.0+dfsg-2.1 [138 kB] Get:42 http://ftpmaster.internal/ubuntu eoan/main armhf libheimbase1-heimdal armhf 7.5.0+dfsg-2.1 [24.0 kB] Get:43 http://ftpmaster.internal/ubuntu eoan/main armhf libhcrypto4-heimdal armhf 7.5.0+dfsg-2.1 [76.7 kB] Get:44 http://ftpmaster.internal/ubuntu eoan/main armhf libwind0-heimdal armhf 7.5.0+dfsg-2.1 [47.1 kB] Get:45 http://ftpmaster.internal/ubuntu eoan/main armhf libhx509-5-heimdal armhf 7.5.0+dfsg-2.1 [87.8 kB] Get:46 http://ftpmaster.internal/ubuntu eoan/main armhf libkrb5-26-heimdal armhf 7.5.0+dfsg-2.1 [167 kB] Get:47 http://ftpmaster.internal/ubuntu eoan/main armhf libheimntlm0-heimdal armhf 7.5.0+dfsg-2.1 [13.1 kB] Get:48 http://ftpmaster.internal/ubuntu eoan/main armhf libgssapi3-heimdal armhf 7.5.0+dfsg-2.1 [78.7 kB] Get:49 http://ftpmaster.internal/ubuntu eoan/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-1 [13.2 kB] Get:50 http://ftpmaster.internal/ubuntu eoan/main armhf libsasl2-2 armhf 2.1.27+dfsg-1 [42.2 kB] Get:51 http://ftpmaster.internal/ubuntu eoan/main armhf libldap-common all 2.4.47+dfsg-3ubuntu2 [16.6 kB] Get:52 http://ftpmaster.internal/ubuntu eoan/main armhf libldap-2.4-2 armhf 2.4.47+dfsg-3ubuntu2 [132 kB] Get:53 http://ftpmaster.internal/ubuntu eoan/main armhf libnghttp2-14 armhf 1.36.0-2 [68.4 kB] Get:54 http://ftpmaster.internal/ubuntu eoan/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [49.2 kB] Get:55 http://ftpmaster.internal/ubuntu eoan/main armhf libssh-4 armhf 0.8.6-3 [162 kB] Get:56 http://ftpmaster.internal/ubuntu eoan/main armhf libcurl4 armhf 7.64.0-2ubuntu1 [198 kB] Get:57 http://ftpmaster.internal/ubuntu eoan/main armhf libjsoncpp1 armhf 1.7.4-3 [65.9 kB] Get:58 http://ftpmaster.internal/ubuntu eoan/main armhf librhash0 armhf 1.3.8-1 [125 kB] Get:59 http://ftpmaster.internal/ubuntu eoan/main armhf libuv1 armhf 1.24.1-1 [58.0 kB] Get:60 http://ftpmaster.internal/ubuntu eoan/main armhf cmake armhf 3.13.4-1 [2831 kB] Get:61 http://ftpmaster.internal/ubuntu eoan/universe armhf d-shlibs all 0.84ubuntu2 [10.5 kB] Get:62 http://ftpmaster.internal/ubuntu eoan/main armhf libtool all 2.4.6-10 [194 kB] Get:63 http://ftpmaster.internal/ubuntu eoan/main armhf dh-autoreconf all 19 [16.1 kB] Get:64 http://ftpmaster.internal/ubuntu eoan/main armhf libarchive-zip-perl all 1.64-1 [84.9 kB] Get:65 http://ftpmaster.internal/ubuntu eoan/main armhf libfile-stripnondeterminism-perl all 1.1.2-1 [13.7 kB] Get:66 http://ftpmaster.internal/ubuntu eoan/main armhf dh-strip-nondeterminism all 1.1.2-1 [5208 B] Get:67 http://ftpmaster.internal/ubuntu eoan/main armhf dwz armhf 0.12-3 [72.1 kB] Get:68 http://ftpmaster.internal/ubuntu eoan/main armhf libcroco3 armhf 0.6.12-3 [69.6 kB] Get:69 http://ftpmaster.internal/ubuntu eoan/main armhf gettext armhf 0.19.8.1-9 [833 kB] Get:70 http://ftpmaster.internal/ubuntu eoan/main armhf intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:71 http://ftpmaster.internal/ubuntu eoan/main armhf po-debconf all 1.0.21 [233 kB] Get:72 http://ftpmaster.internal/ubuntu eoan/main armhf debhelper all 12.1.1ubuntu1 [899 kB] Get:73 http://ftpmaster.internal/ubuntu eoan/main armhf libllvm7 armhf 1:7.0.1-8 [11.2 MB] Get:74 http://ftpmaster.internal/ubuntu eoan/universe armhf libclang1-7 armhf 1:7.0.1-8 [4960 kB] Get:75 http://ftpmaster.internal/ubuntu eoan/universe armhf libxapian30 armhf 1.4.10-1 [553 kB] Get:76 http://ftpmaster.internal/ubuntu eoan/universe armhf doxygen armhf 1.8.13-10ubuntu1 [3463 kB] Get:77 http://ftpmaster.internal/ubuntu eoan/main armhf libfreetype6 armhf 2.9.1-3 [278 kB] Get:78 http://ftpmaster.internal/ubuntu eoan/main armhf fonts-dejavu-core all 2.37-1 [1041 kB] Get:79 http://ftpmaster.internal/ubuntu eoan/main armhf fontconfig-config all 2.13.1-2ubuntu2 [28.9 kB] Get:80 http://ftpmaster.internal/ubuntu eoan/main armhf libfontconfig1 armhf 2.13.1-2ubuntu2 [95.8 kB] Get:81 http://ftpmaster.internal/ubuntu eoan/main armhf fontconfig armhf 2.13.1-2ubuntu2 [169 kB] Get:82 http://ftpmaster.internal/ubuntu eoan/universe armhf libcdt5 armhf 2.40.1-6 [16.8 kB] Get:83 http://ftpmaster.internal/ubuntu eoan/universe armhf libcgraph6 armhf 2.40.1-6 [34.0 kB] Get:84 http://ftpmaster.internal/ubuntu eoan/main armhf libjpeg-turbo8 armhf 2.0.1-0ubuntu2 [90.0 kB] Get:85 http://ftpmaster.internal/ubuntu eoan/main armhf libjpeg8 armhf 8c-2ubuntu8 [2202 B] Get:86 http://ftpmaster.internal/ubuntu eoan/main armhf libjbig0 armhf 2.1-3.1build1 [23.9 kB] Get:87 http://ftpmaster.internal/ubuntu eoan/main armhf libwebp6 armhf 0.6.1-2 [152 kB] Get:88 http://ftpmaster.internal/ubuntu eoan/main armhf libtiff5 armhf 4.0.10-4 [139 kB] Get:89 http://ftpmaster.internal/ubuntu eoan/main armhf libxpm4 armhf 1:3.5.12-1 [29.0 kB] Get:90 http://ftpmaster.internal/ubuntu eoan/main armhf libgd3 armhf 2.2.5-5.1 [98.3 kB] Get:91 http://ftpmaster.internal/ubuntu eoan/universe armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [132 kB] Get:92 http://ftpmaster.internal/ubuntu eoan/main armhf libpixman-1-0 armhf 0.36.0-1 [157 kB] Get:93 http://ftpmaster.internal/ubuntu eoan/main armhf libxcb-render0 armhf 1.13.1-2 [13.9 kB] Get:94 http://ftpmaster.internal/ubuntu eoan/main armhf libxcb-shm0 armhf 1.13.1-2 [5380 B] Get:95 http://ftpmaster.internal/ubuntu eoan/main armhf libxrender1 armhf 1:0.9.10-1 [15.6 kB] Get:96 http://ftpmaster.internal/ubuntu eoan/main armhf libcairo2 armhf 1.16.0-4 [510 kB] Get:97 http://ftpmaster.internal/ubuntu eoan/main armhf libltdl7 armhf 2.4.6-10 [35.2 kB] Get:98 http://ftpmaster.internal/ubuntu eoan/main armhf libthai-data all 0.1.28-2 [134 kB] Get:99 http://ftpmaster.internal/ubuntu eoan/main armhf libdatrie1 armhf 0.2.12-2 [15.0 kB] Get:100 http://ftpmaster.internal/ubuntu eoan/main armhf libthai0 armhf 0.1.28-2 [14.7 kB] Get:101 http://ftpmaster.internal/ubuntu eoan/main armhf libpango-1.0-0 armhf 1.42.4-6 [138 kB] Get:102 http://ftpmaster.internal/ubuntu eoan/main armhf libgraphite2-3 armhf 1.3.13-7 [62.8 kB] Get:103 http://ftpmaster.internal/ubuntu eoan/main armhf libharfbuzz0b armhf 2.3.1-1 [322 kB] Get:104 http://ftpmaster.internal/ubuntu eoan/main armhf libpangoft2-1.0-0 armhf 1.42.4-6 [30.0 kB] Get:105 http://ftpmaster.internal/ubuntu eoan/main armhf libpangocairo-1.0-0 armhf 1.42.4-6 [19.5 kB] Get:106 http://ftpmaster.internal/ubuntu eoan/universe armhf libpathplan4 armhf 2.40.1-6 [19.9 kB] Get:107 http://ftpmaster.internal/ubuntu eoan/universe armhf libgvc6 armhf 2.40.1-6 [509 kB] Get:108 http://ftpmaster.internal/ubuntu eoan/universe armhf libgvpr2 armhf 2.40.1-6 [147 kB] Get:109 http://ftpmaster.internal/ubuntu eoan/universe armhf liblab-gamut1 armhf 2.40.1-6 [178 kB] Get:110 http://ftpmaster.internal/ubuntu eoan/main armhf x11-common all 1:7.7+19ubuntu12 [22.4 kB] Get:111 http://ftpmaster.internal/ubuntu eoan/main armhf libice6 armhf 2:1.0.9-2 [33.5 kB] Get:112 http://ftpmaster.internal/ubuntu eoan/main armhf libsm6 armhf 2:1.2.3-1 [14.1 kB] Get:113 http://ftpmaster.internal/ubuntu eoan/main armhf libxt6 armhf 1:1.1.5-1 [129 kB] Get:114 http://ftpmaster.internal/ubuntu eoan/main armhf libxmu6 armhf 2:1.1.2-2 [38.3 kB] Get:115 http://ftpmaster.internal/ubuntu eoan/main armhf libxaw7 armhf 2:1.0.13-1 [141 kB] Get:116 http://ftpmaster.internal/ubuntu eoan/universe armhf graphviz armhf 2.40.1-6 [482 kB] Get:117 http://ftpmaster.internal/ubuntu eoan/universe armhf hdf5-helpers armhf 1.10.4+repack-10 [14.0 kB] Get:118 http://ftpmaster.internal/ubuntu eoan/universe armhf libaec0 armhf 1.0.2-1 [19.1 kB] Get:119 http://ftpmaster.internal/ubuntu eoan/main armhf libboost1.67-dev armhf 1.67.0-13 [8362 kB] Get:120 http://ftpmaster.internal/ubuntu eoan/main armhf libboost-dev armhf 1.67.0.1 [3228 B] Get:121 http://ftpmaster.internal/ubuntu eoan/universe armhf libcppunit-1.14-0 armhf 1.14.0-3 [67.5 kB] Get:122 http://ftpmaster.internal/ubuntu eoan/universe armhf libcppunit-dev armhf 1.14.0-3 [129 kB] Get:123 http://ftpmaster.internal/ubuntu eoan/main armhf libgfortran5 armhf 9-20190420-1ubuntu1 [251 kB] Get:124 http://ftpmaster.internal/ubuntu eoan/universe armhf libsz2 armhf 1.0.2-1 [5072 B] Get:125 http://ftpmaster.internal/ubuntu eoan/universe armhf libhdf5-103 armhf 1.10.4+repack-10 [1262 kB] Get:126 http://ftpmaster.internal/ubuntu eoan/universe armhf libhdf5-cpp-103 armhf 1.10.4+repack-10 [99.8 kB] Get:127 http://ftpmaster.internal/ubuntu eoan/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1ubuntu2 [166 kB] Get:128 http://ftpmaster.internal/ubuntu eoan/main armhf libjpeg-turbo8-dev armhf 2.0.1-0ubuntu2 [203 kB] Get:129 http://ftpmaster.internal/ubuntu eoan/main armhf libjpeg8-dev armhf 8c-2ubuntu8 [1554 B] Get:130 http://ftpmaster.internal/ubuntu eoan/main armhf libjpeg-dev armhf 8c-2ubuntu8 [1554 B] Get:131 http://ftpmaster.internal/ubuntu eoan/universe armhf libaec-dev armhf 1.0.2-1 [16.3 kB] Get:132 http://ftpmaster.internal/ubuntu eoan/universe armhf libhdf5-dev armhf 1.10.4+repack-10 [2491 kB] Get:133 http://ftpmaster.internal/ubuntu eoan/main armhf libjsoncpp-dev armhf 1.7.4-3 [77.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 62.6 MB in 3s (21.0 MB/s) Selecting previously unselected package libxau6:armhf. (Reading database ... 12526 files and directories currently installed.) Preparing to unpack .../000-libxau6_1%3a1.0.8-1_armhf.deb ... Unpacking libxau6:armhf (1:1.0.8-1) ... Selecting previously unselected package libbsd0:armhf. Preparing to unpack .../001-libbsd0_0.9.1-2_armhf.deb ... Unpacking libbsd0:armhf (0.9.1-2) ... Selecting previously unselected package libxdmcp6:armhf. Preparing to unpack .../002-libxdmcp6_1%3a1.1.2-3_armhf.deb ... Unpacking libxdmcp6:armhf (1:1.1.2-3) ... Selecting previously unselected package libxcb1:armhf. Preparing to unpack .../003-libxcb1_1.13.1-2_armhf.deb ... Unpacking libxcb1:armhf (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../004-libx11-data_2%3a1.6.7-1_all.deb ... Unpacking libx11-data (2:1.6.7-1) ... Selecting previously unselected package libx11-6:armhf. Preparing to unpack .../005-libx11-6_2%3a1.6.7-1_armhf.deb ... Unpacking libx11-6:armhf (2:1.6.7-1) ... Selecting previously unselected package libxext6:armhf. Preparing to unpack .../006-libxext6_2%3a1.3.3-1_armhf.deb ... Unpacking libxext6:armhf (2:1.3.3-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../007-bsdmainutils_11.1.2ubuntu2_armhf.deb ... Unpacking bsdmainutils (11.1.2ubuntu2) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../008-libuchardet0_0.0.6-3_armhf.deb ... Unpacking libuchardet0:armhf (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.22.4-3_armhf.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../010-libpipeline1_1.5.1-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../011-man-db_2.8.5-2_armhf.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../012-libmagic-mgc_1%3a5.35-4_armhf.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../013-libmagic1_1%3a5.35-4_armhf.deb ... Unpacking libmagic1:armhf (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../014-file_1%3a5.35-4_armhf.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../015-libelf1_0.176-1_armhf.deb ... Unpacking libelf1:armhf (0.176-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../016-libexpat1_2.2.6-1_armhf.deb ... Unpacking libexpat1:armhf (2.2.6-1) ... Selecting previously unselected package libfribidi0:armhf. Preparing to unpack .../017-libfribidi0_1.0.5-3.1_armhf.deb ... Unpacking libfribidi0:armhf (1.0.5-3.1) ... Selecting previously unselected package libglib2.0-0:armhf. Preparing to unpack .../018-libglib2.0-0_2.60.0-1_armhf.deb ... Unpacking libglib2.0-0:armhf (2.60.0-1) ... Selecting previously unselected package libicu63:armhf. Preparing to unpack .../019-libicu63_63.1-6_armhf.deb ... Unpacking libicu63:armhf (63.1-6) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../020-libxml2_2.9.4+dfsg1-7ubuntu3_armhf.deb ... Unpacking libxml2:armhf (2.9.4+dfsg1-7ubuntu3) ... Selecting previously unselected package ucf. Preparing to unpack .../021-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../022-gettext-base_0.19.8.1-9_armhf.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libedit2:armhf. Preparing to unpack .../023-libedit2_3.1-20181209-1_armhf.deb ... Unpacking libedit2:armhf (3.1-20181209-1) ... Selecting previously unselected package libkrb5support0:armhf. Preparing to unpack .../024-libkrb5support0_1.17-1_armhf.deb ... Unpacking libkrb5support0:armhf (1.17-1) ... Selecting previously unselected package libk5crypto3:armhf. Preparing to unpack .../025-libk5crypto3_1.17-1_armhf.deb ... Unpacking libk5crypto3:armhf (1.17-1) ... Selecting previously unselected package libkeyutils1:armhf. Preparing to unpack .../026-libkeyutils1_1.6-6_armhf.deb ... Unpacking libkeyutils1:armhf (1.6-6) ... Selecting previously unselected package libkrb5-3:armhf. Preparing to unpack .../027-libkrb5-3_1.17-1_armhf.deb ... Unpacking libkrb5-3:armhf (1.17-1) ... Selecting previously unselected package libgssapi-krb5-2:armhf. Preparing to unpack .../028-libgssapi-krb5-2_1.17-1_armhf.deb ... Unpacking libgssapi-krb5-2:armhf (1.17-1) ... Selecting previously unselected package libpsl5:armhf. Preparing to unpack .../029-libpsl5_0.20.2-2_armhf.deb ... Unpacking libpsl5:armhf (0.20.2-2) ... Selecting previously unselected package libsigsegv2:armhf. Preparing to unpack .../030-libsigsegv2_2.12-2_armhf.deb ... Unpacking libsigsegv2:armhf (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../031-m4_1.4.18-2_armhf.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../032-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../033-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../034-automake_1%3a1.16.1-4ubuntu3_all.deb ... Unpacking automake (1:1.16.1-4ubuntu3) ... Selecting previously unselected package autopoint. Preparing to unpack .../035-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package cmake-data. Preparing to unpack .../036-cmake-data_3.13.4-1_all.deb ... Unpacking cmake-data (3.13.4-1) ... Selecting previously unselected package libarchive13:armhf. Preparing to unpack .../037-libarchive13_3.3.3-4_armhf.deb ... Unpacking libarchive13:armhf (3.3.3-4) ... Selecting previously unselected package libroken18-heimdal:armhf. Preparing to unpack .../038-libroken18-heimdal_7.5.0+dfsg-2.1_armhf.deb ... Unpacking libroken18-heimdal:armhf (7.5.0+dfsg-2.1) ... Selecting previously unselected package libasn1-8-heimdal:armhf. Preparing to unpack .../039-libasn1-8-heimdal_7.5.0+dfsg-2.1_armhf.deb ... Unpacking libasn1-8-heimdal:armhf (7.5.0+dfsg-2.1) ... Selecting previously unselected package libheimbase1-heimdal:armhf. Preparing to unpack .../040-libheimbase1-heimdal_7.5.0+dfsg-2.1_armhf.deb ... Unpacking libheimbase1-heimdal:armhf (7.5.0+dfsg-2.1) ... Selecting previously unselected package libhcrypto4-heimdal:armhf. Preparing to unpack .../041-libhcrypto4-heimdal_7.5.0+dfsg-2.1_armhf.deb ... Unpacking libhcrypto4-heimdal:armhf (7.5.0+dfsg-2.1) ... Selecting previously unselected package libwind0-heimdal:armhf. Preparing to unpack .../042-libwind0-heimdal_7.5.0+dfsg-2.1_armhf.deb ... Unpacking libwind0-heimdal:armhf (7.5.0+dfsg-2.1) ... Selecting previously unselected package libhx509-5-heimdal:armhf. Preparing to unpack .../043-libhx509-5-heimdal_7.5.0+dfsg-2.1_armhf.deb ... Unpacking libhx509-5-heimdal:armhf (7.5.0+dfsg-2.1) ... Selecting previously unselected package libkrb5-26-heimdal:armhf. Preparing to unpack .../044-libkrb5-26-heimdal_7.5.0+dfsg-2.1_armhf.deb ... Unpacking libkrb5-26-heimdal:armhf (7.5.0+dfsg-2.1) ... Selecting previously unselected package libheimntlm0-heimdal:armhf. Preparing to unpack .../045-libheimntlm0-heimdal_7.5.0+dfsg-2.1_armhf.deb ... Unpacking libheimntlm0-heimdal:armhf (7.5.0+dfsg-2.1) ... Selecting previously unselected package libgssapi3-heimdal:armhf. Preparing to unpack .../046-libgssapi3-heimdal_7.5.0+dfsg-2.1_armhf.deb ... Unpacking libgssapi3-heimdal:armhf (7.5.0+dfsg-2.1) ... Selecting previously unselected package libsasl2-modules-db:armhf. Preparing to unpack .../047-libsasl2-modules-db_2.1.27+dfsg-1_armhf.deb ... Unpacking libsasl2-modules-db:armhf (2.1.27+dfsg-1) ... Selecting previously unselected package libsasl2-2:armhf. Preparing to unpack .../048-libsasl2-2_2.1.27+dfsg-1_armhf.deb ... Unpacking libsasl2-2:armhf (2.1.27+dfsg-1) ... Selecting previously unselected package libldap-common. Preparing to unpack .../049-libldap-common_2.4.47+dfsg-3ubuntu2_all.deb ... Unpacking libldap-common (2.4.47+dfsg-3ubuntu2) ... Selecting previously unselected package libldap-2.4-2:armhf. Preparing to unpack .../050-libldap-2.4-2_2.4.47+dfsg-3ubuntu2_armhf.deb ... Unpacking libldap-2.4-2:armhf (2.4.47+dfsg-3ubuntu2) ... Selecting previously unselected package libnghttp2-14:armhf. Preparing to unpack .../051-libnghttp2-14_1.36.0-2_armhf.deb ... Unpacking libnghttp2-14:armhf (1.36.0-2) ... Selecting previously unselected package librtmp1:armhf. Preparing to unpack .../052-librtmp1_2.4+20151223.gitfa8646d.1-2_armhf.deb ... Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2) ... Selecting previously unselected package libssh-4:armhf. Preparing to unpack .../053-libssh-4_0.8.6-3_armhf.deb ... Unpacking libssh-4:armhf (0.8.6-3) ... Selecting previously unselected package libcurl4:armhf. Preparing to unpack .../054-libcurl4_7.64.0-2ubuntu1_armhf.deb ... Unpacking libcurl4:armhf (7.64.0-2ubuntu1) ... Selecting previously unselected package libjsoncpp1:armhf. Preparing to unpack .../055-libjsoncpp1_1.7.4-3_armhf.deb ... Unpacking libjsoncpp1:armhf (1.7.4-3) ... Selecting previously unselected package librhash0:armhf. Preparing to unpack .../056-librhash0_1.3.8-1_armhf.deb ... Unpacking librhash0:armhf (1.3.8-1) ... Selecting previously unselected package libuv1:armhf. Preparing to unpack .../057-libuv1_1.24.1-1_armhf.deb ... Unpacking libuv1:armhf (1.24.1-1) ... Selecting previously unselected package cmake. Preparing to unpack .../058-cmake_3.13.4-1_armhf.deb ... Unpacking cmake (3.13.4-1) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../059-d-shlibs_0.84ubuntu2_all.deb ... Unpacking d-shlibs (0.84ubuntu2) ... Selecting previously unselected package libtool. Preparing to unpack .../060-libtool_2.4.6-10_all.deb ... Unpacking libtool (2.4.6-10) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../061-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../062-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../063-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../064-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package dwz. Preparing to unpack .../065-dwz_0.12-3_armhf.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libcroco3:armhf. Preparing to unpack .../066-libcroco3_0.6.12-3_armhf.deb ... Unpacking libcroco3:armhf (0.6.12-3) ... Selecting previously unselected package gettext. Preparing to unpack .../067-gettext_0.19.8.1-9_armhf.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../068-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../069-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../070-debhelper_12.1.1ubuntu1_all.deb ... Unpacking debhelper (12.1.1ubuntu1) ... Selecting previously unselected package libllvm7:armhf. Preparing to unpack .../071-libllvm7_1%3a7.0.1-8_armhf.deb ... Unpacking libllvm7:armhf (1:7.0.1-8) ... Selecting previously unselected package libclang1-7. Preparing to unpack .../072-libclang1-7_1%3a7.0.1-8_armhf.deb ... Unpacking libclang1-7 (1:7.0.1-8) ... Selecting previously unselected package libxapian30:armhf. Preparing to unpack .../073-libxapian30_1.4.10-1_armhf.deb ... Unpacking libxapian30:armhf (1.4.10-1) ... Selecting previously unselected package doxygen. Preparing to unpack .../074-doxygen_1.8.13-10ubuntu1_armhf.deb ... Unpacking doxygen (1.8.13-10ubuntu1) ... Selecting previously unselected package libfreetype6:armhf. Preparing to unpack .../075-libfreetype6_2.9.1-3_armhf.deb ... Unpacking libfreetype6:armhf (2.9.1-3) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../076-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../077-fontconfig-config_2.13.1-2ubuntu2_all.deb ... Unpacking fontconfig-config (2.13.1-2ubuntu2) ... Selecting previously unselected package libfontconfig1:armhf. Preparing to unpack .../078-libfontconfig1_2.13.1-2ubuntu2_armhf.deb ... Unpacking libfontconfig1:armhf (2.13.1-2ubuntu2) ... Selecting previously unselected package fontconfig. Preparing to unpack .../079-fontconfig_2.13.1-2ubuntu2_armhf.deb ... Unpacking fontconfig (2.13.1-2ubuntu2) ... Selecting previously unselected package libcdt5. Preparing to unpack .../080-libcdt5_2.40.1-6_armhf.deb ... Unpacking libcdt5 (2.40.1-6) ... Selecting previously unselected package libcgraph6. Preparing to unpack .../081-libcgraph6_2.40.1-6_armhf.deb ... Unpacking libcgraph6 (2.40.1-6) ... Selecting previously unselected package libjpeg-turbo8:armhf. Preparing to unpack .../082-libjpeg-turbo8_2.0.1-0ubuntu2_armhf.deb ... Unpacking libjpeg-turbo8:armhf (2.0.1-0ubuntu2) ... Selecting previously unselected package libjpeg8:armhf. Preparing to unpack .../083-libjpeg8_8c-2ubuntu8_armhf.deb ... Unpacking libjpeg8:armhf (8c-2ubuntu8) ... Selecting previously unselected package libjbig0:armhf. Preparing to unpack .../084-libjbig0_2.1-3.1build1_armhf.deb ... Unpacking libjbig0:armhf (2.1-3.1build1) ... Selecting previously unselected package libwebp6:armhf. Preparing to unpack .../085-libwebp6_0.6.1-2_armhf.deb ... Unpacking libwebp6:armhf (0.6.1-2) ... Selecting previously unselected package libtiff5:armhf. Preparing to unpack .../086-libtiff5_4.0.10-4_armhf.deb ... Unpacking libtiff5:armhf (4.0.10-4) ... Selecting previously unselected package libxpm4:armhf. Preparing to unpack .../087-libxpm4_1%3a3.5.12-1_armhf.deb ... Unpacking libxpm4:armhf (1:3.5.12-1) ... Selecting previously unselected package libgd3:armhf. Preparing to unpack .../088-libgd3_2.2.5-5.1_armhf.deb ... Unpacking libgd3:armhf (2.2.5-5.1) ... Selecting previously unselected package libgts-0.7-5:armhf. Preparing to unpack .../089-libgts-0.7-5_0.7.6+darcs121130-4_armhf.deb ... Unpacking libgts-0.7-5:armhf (0.7.6+darcs121130-4) ... Selecting previously unselected package libpixman-1-0:armhf. Preparing to unpack .../090-libpixman-1-0_0.36.0-1_armhf.deb ... Unpacking libpixman-1-0:armhf (0.36.0-1) ... Selecting previously unselected package libxcb-render0:armhf. Preparing to unpack .../091-libxcb-render0_1.13.1-2_armhf.deb ... Unpacking libxcb-render0:armhf (1.13.1-2) ... Selecting previously unselected package libxcb-shm0:armhf. Preparing to unpack .../092-libxcb-shm0_1.13.1-2_armhf.deb ... Unpacking libxcb-shm0:armhf (1.13.1-2) ... Selecting previously unselected package libxrender1:armhf. Preparing to unpack .../093-libxrender1_1%3a0.9.10-1_armhf.deb ... Unpacking libxrender1:armhf (1:0.9.10-1) ... Selecting previously unselected package libcairo2:armhf. Preparing to unpack .../094-libcairo2_1.16.0-4_armhf.deb ... Unpacking libcairo2:armhf (1.16.0-4) ... Selecting previously unselected package libltdl7:armhf. Preparing to unpack .../095-libltdl7_2.4.6-10_armhf.deb ... Unpacking libltdl7:armhf (2.4.6-10) ... Selecting previously unselected package libthai-data. Preparing to unpack .../096-libthai-data_0.1.28-2_all.deb ... Unpacking libthai-data (0.1.28-2) ... Selecting previously unselected package libdatrie1:armhf. Preparing to unpack .../097-libdatrie1_0.2.12-2_armhf.deb ... Unpacking libdatrie1:armhf (0.2.12-2) ... Selecting previously unselected package libthai0:armhf. Preparing to unpack .../098-libthai0_0.1.28-2_armhf.deb ... Unpacking libthai0:armhf (0.1.28-2) ... Selecting previously unselected package libpango-1.0-0:armhf. Preparing to unpack .../099-libpango-1.0-0_1.42.4-6_armhf.deb ... Unpacking libpango-1.0-0:armhf (1.42.4-6) ... Selecting previously unselected package libgraphite2-3:armhf. Preparing to unpack .../100-libgraphite2-3_1.3.13-7_armhf.deb ... Unpacking libgraphite2-3:armhf (1.3.13-7) ... Selecting previously unselected package libharfbuzz0b:armhf. Preparing to unpack .../101-libharfbuzz0b_2.3.1-1_armhf.deb ... Unpacking libharfbuzz0b:armhf (2.3.1-1) ... Selecting previously unselected package libpangoft2-1.0-0:armhf. Preparing to unpack .../102-libpangoft2-1.0-0_1.42.4-6_armhf.deb ... Unpacking libpangoft2-1.0-0:armhf (1.42.4-6) ... Selecting previously unselected package libpangocairo-1.0-0:armhf. Preparing to unpack .../103-libpangocairo-1.0-0_1.42.4-6_armhf.deb ... Unpacking libpangocairo-1.0-0:armhf (1.42.4-6) ... Selecting previously unselected package libpathplan4. Preparing to unpack .../104-libpathplan4_2.40.1-6_armhf.deb ... Unpacking libpathplan4 (2.40.1-6) ... Selecting previously unselected package libgvc6. Preparing to unpack .../105-libgvc6_2.40.1-6_armhf.deb ... Unpacking libgvc6 (2.40.1-6) ... Selecting previously unselected package libgvpr2. Preparing to unpack .../106-libgvpr2_2.40.1-6_armhf.deb ... Unpacking libgvpr2 (2.40.1-6) ... Selecting previously unselected package liblab-gamut1. Preparing to unpack .../107-liblab-gamut1_2.40.1-6_armhf.deb ... Unpacking liblab-gamut1 (2.40.1-6) ... Selecting previously unselected package x11-common. Preparing to unpack .../108-x11-common_1%3a7.7+19ubuntu12_all.deb ... dpkg-query: no packages found matching nux-tools Unpacking x11-common (1:7.7+19ubuntu12) ... Selecting previously unselected package libice6:armhf. Preparing to unpack .../109-libice6_2%3a1.0.9-2_armhf.deb ... Unpacking libice6:armhf (2:1.0.9-2) ... Selecting previously unselected package libsm6:armhf. Preparing to unpack .../110-libsm6_2%3a1.2.3-1_armhf.deb ... Unpacking libsm6:armhf (2:1.2.3-1) ... Selecting previously unselected package libxt6:armhf. Preparing to unpack .../111-libxt6_1%3a1.1.5-1_armhf.deb ... Unpacking libxt6:armhf (1:1.1.5-1) ... Selecting previously unselected package libxmu6:armhf. Preparing to unpack .../112-libxmu6_2%3a1.1.2-2_armhf.deb ... Unpacking libxmu6:armhf (2:1.1.2-2) ... Selecting previously unselected package libxaw7:armhf. Preparing to unpack .../113-libxaw7_2%3a1.0.13-1_armhf.deb ... Unpacking libxaw7:armhf (2:1.0.13-1) ... Selecting previously unselected package graphviz. Preparing to unpack .../114-graphviz_2.40.1-6_armhf.deb ... Unpacking graphviz (2.40.1-6) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../115-hdf5-helpers_1.10.4+repack-10_armhf.deb ... Unpacking hdf5-helpers (1.10.4+repack-10) ... Selecting previously unselected package libaec0:armhf. Preparing to unpack .../116-libaec0_1.0.2-1_armhf.deb ... Unpacking libaec0:armhf (1.0.2-1) ... Selecting previously unselected package libboost1.67-dev:armhf. Preparing to unpack .../117-libboost1.67-dev_1.67.0-13_armhf.deb ... Unpacking libboost1.67-dev:armhf (1.67.0-13) ... Selecting previously unselected package libboost-dev:armhf. Preparing to unpack .../118-libboost-dev_1.67.0.1_armhf.deb ... Unpacking libboost-dev:armhf (1.67.0.1) ... Selecting previously unselected package libcppunit-1.14-0:armhf. Preparing to unpack .../119-libcppunit-1.14-0_1.14.0-3_armhf.deb ... Unpacking libcppunit-1.14-0:armhf (1.14.0-3) ... Selecting previously unselected package libcppunit-dev. Preparing to unpack .../120-libcppunit-dev_1.14.0-3_armhf.deb ... Unpacking libcppunit-dev (1.14.0-3) ... Selecting previously unselected package libgfortran5:armhf. Preparing to unpack .../121-libgfortran5_9-20190420-1ubuntu1_armhf.deb ... Unpacking libgfortran5:armhf (9-20190420-1ubuntu1) ... Selecting previously unselected package libsz2:armhf. Preparing to unpack .../122-libsz2_1.0.2-1_armhf.deb ... Unpacking libsz2:armhf (1.0.2-1) ... Selecting previously unselected package libhdf5-103:armhf. Preparing to unpack .../123-libhdf5-103_1.10.4+repack-10_armhf.deb ... Unpacking libhdf5-103:armhf (1.10.4+repack-10) ... Selecting previously unselected package libhdf5-cpp-103:armhf. Preparing to unpack .../124-libhdf5-cpp-103_1.10.4+repack-10_armhf.deb ... Unpacking libhdf5-cpp-103:armhf (1.10.4+repack-10) ... Selecting previously unselected package zlib1g-dev:armhf. Preparing to unpack .../125-zlib1g-dev_1%3a1.2.11.dfsg-1ubuntu2_armhf.deb ... Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-1ubuntu2) ... Selecting previously unselected package libjpeg-turbo8-dev:armhf. Preparing to unpack .../126-libjpeg-turbo8-dev_2.0.1-0ubuntu2_armhf.deb ... Unpacking libjpeg-turbo8-dev:armhf (2.0.1-0ubuntu2) ... Selecting previously unselected package libjpeg8-dev:armhf. Preparing to unpack .../127-libjpeg8-dev_8c-2ubuntu8_armhf.deb ... Unpacking libjpeg8-dev:armhf (8c-2ubuntu8) ... Selecting previously unselected package libjpeg-dev:armhf. Preparing to unpack .../128-libjpeg-dev_8c-2ubuntu8_armhf.deb ... Unpacking libjpeg-dev:armhf (8c-2ubuntu8) ... Selecting previously unselected package libaec-dev:armhf. Preparing to unpack .../129-libaec-dev_1.0.2-1_armhf.deb ... Unpacking libaec-dev:armhf (1.0.2-1) ... Selecting previously unselected package libhdf5-dev. Preparing to unpack .../130-libhdf5-dev_1.10.4+repack-10_armhf.deb ... Unpacking libhdf5-dev (1.10.4+repack-10) ... Selecting previously unselected package libjsoncpp-dev:armhf. Preparing to unpack .../131-libjsoncpp-dev_1.7.4-3_armhf.deb ... Unpacking libjsoncpp-dev:armhf (1.7.4-3) ... Selecting previously unselected package sbuild-build-depends-gatb-core-dummy. Preparing to unpack .../132-sbuild-build-depends-gatb-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-gatb-core-dummy (0.invalid.0) ... Setting up libboost1.67-dev:armhf (1.67.0-13) ... Setting up libexpat1:armhf (2.2.6-1) ... Setting up libpipeline1:armhf (1.5.1-2) ... Setting up libgraphite2-3:armhf (1.3.13-7) ... Setting up libpixman-1-0:armhf (0.36.0-1) ... Setting up libxapian30:armhf (1.4.10-1) ... Setting up libxau6:armhf (1:1.0.8-1) ... Setting up libkeyutils1:armhf (1.6-6) ... Setting up libpsl5:armhf (0.20.2-2) ... Setting up hdf5-helpers (1.10.4+repack-10) ... Setting up libdatrie1:armhf (0.2.12-2) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up libcppunit-1.14-0:armhf (1.14.0-3) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:armhf (2.60.0-1) ... No schema files found: doing nothing. Setting up liblab-gamut1 (2.40.1-6) ... Setting up x11-common (1:7.7+19ubuntu12) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libnghttp2-14:armhf (1.36.0-2) ... Setting up libmagic1:armhf (1:5.35-4) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.35-4) ... Setting up libldap-common (2.4.47+dfsg-3ubuntu2) ... Setting up libjbig0:armhf (2.1-3.1build1) ... Setting up libaec0:armhf (1.0.2-1) ... Setting up libicu63:armhf (63.1-6) ... Setting up libkrb5support0:armhf (1.17-1) ... Setting up libsasl2-modules-db:armhf (2.1.27+dfsg-1) ... Setting up libgts-0.7-5:armhf (0.7.6+darcs121130-4) ... Setting up autotools-dev (20180224.1) ... Setting up libuv1:armhf (1.24.1-1) ... Setting up libfreetype6:armhf (2.9.1-3) ... Setting up libx11-data (2:1.6.7-1) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2) ... Setting up libpathplan4 (2.40.1-6) ... Setting up libsigsegv2:armhf (2.12-2) ... Setting up libfribidi0:armhf (1.0.5-3.1) ... Setting up autopoint (0.19.8.1-9) ... Setting up libwebp6:armhf (0.6.1-2) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up d-shlibs (0.84ubuntu2) ... Setting up ucf (3.0038+nmu1) ... Setting up libk5crypto3:armhf (1.17-1) ... Setting up libjpeg-turbo8:armhf (2.0.1-0ubuntu2) ... Setting up libltdl7:armhf (2.4.6-10) ... Setting up libsasl2-2:armhf (2.1.27+dfsg-1) ... Setting up libgfortran5:armhf (9-20190420-1ubuntu1) ... Setting up libroken18-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1ubuntu2) ... Setting up librhash0:armhf (1.3.8-1) ... Setting up libuchardet0:armhf (0.0.6-3) ... Setting up libharfbuzz0b:armhf (2.3.1-1) ... Setting up libthai-data (0.1.28-2) ... Setting up cmake-data (3.13.4-1) ... Setting up libcdt5 (2.40.1-6) ... Setting up libkrb5-3:armhf (1.17-1) ... Setting up libcgraph6 (2.40.1-6) ... Setting up libboost-dev:armhf (1.67.0.1) ... Setting up libcppunit-dev (1.14.0-3) ... Setting up libbsd0:armhf (0.9.1-2) ... Setting up libelf1:armhf (0.176-1) ... Setting up libxml2:armhf (2.9.4+dfsg1-7ubuntu3) ... Setting up libsz2:armhf (1.0.2-1) ... Setting up libjsoncpp1:armhf (1.7.4-3) ... Setting up libheimbase1-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libjpeg8:armhf (8c-2ubuntu8) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libice6:armhf (2:1.0.9-2) ... Setting up libjsoncpp-dev:armhf (1.7.4-3) ... Setting up libjpeg-turbo8-dev:armhf (2.0.1-0ubuntu2) ... Setting up libxdmcp6:armhf (1:1.1.2-3) ... Setting up libxcb1:armhf (1.13.1-2) ... Setting up libtool (2.4.6-10) ... Setting up libarchive13:armhf (3.3.3-4) ... Setting up libxcb-render0:armhf (1.13.1-2) ... Setting up fontconfig-config (2.13.1-2ubuntu2) ... Setting up libasn1-8-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libedit2:armhf (3.1-20181209-1) ... Setting up libaec-dev:armhf (1.0.2-1) ... Setting up m4 (1.4.18-2) ... Setting up libxcb-shm0:armhf (1.13.1-2) ... Setting up libhcrypto4-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libthai0:armhf (0.1.28-2) ... Setting up libwind0-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libhdf5-103:armhf (1.10.4+repack-10) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:armhf (1.17-1) ... Setting up libcroco3:armhf (0.6.12-3) ... Setting up libssh-4:armhf (0.8.6-3) ... Setting up autoconf (2.69-11) ... Setting up libgvpr2 (2.40.1-6) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libllvm7:armhf (1:7.0.1-8) ... Setting up libx11-6:armhf (2:1.6.7-1) ... Setting up libtiff5:armhf (4.0.10-4) ... Setting up libfontconfig1:armhf (2.13.1-2ubuntu2) ... Setting up libclang1-7 (1:7.0.1-8) ... Setting up libjpeg8-dev:armhf (8c-2ubuntu8) ... Setting up libsm6:armhf (2:1.2.3-1) ... Setting up automake (1:1.16.1-4ubuntu3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up fontconfig (2.13.1-2ubuntu2) ... Regenerating fonts cache... done. Setting up gettext (0.19.8.1-9) ... Setting up libxpm4:armhf (1:3.5.12-1) ... Setting up libxrender1:armhf (1:0.9.10-1) ... Setting up libhx509-5-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libpango-1.0-0:armhf (1.42.4-6) ... Setting up libhdf5-cpp-103:armhf (1.10.4+repack-10) ... Setting up libjpeg-dev:armhf (8c-2ubuntu8) ... Setting up libxext6:armhf (2:1.3.3-1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libcairo2:armhf (1.16.0-4) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up doxygen (1.8.13-10ubuntu1) ... Setting up libhdf5-dev (1.10.4+repack-10) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libgd3:armhf (2.2.5-5.1) ... Setting up libxt6:armhf (1:1.1.5-1) ... Setting up libpangoft2-1.0-0:armhf (1.42.4-6) ... Setting up libpangocairo-1.0-0:armhf (1.42.4-6) ... Setting up libkrb5-26-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libxmu6:armhf (2:1.1.2-2) ... Setting up po-debconf (1.0.21) ... Setting up libxaw7:armhf (2:1.0.13-1) ... Setting up libheimntlm0-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libgssapi3-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libgvc6 (2.40.1-6) ... Setting up graphviz (2.40.1-6) ... Setting up libldap-2.4-2:armhf (2.4.47+dfsg-3ubuntu2) ... Setting up libcurl4:armhf (7.64.0-2ubuntu1) ... Setting up cmake (3.13.4-1) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up debhelper (12.1.1ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-gatb-core-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.29-0ubuntu2) ... Processing triggers for systemd (240-6ubuntu5) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-145-generic arm64 (armv7l) Toolchain package versions: binutils_2.32-7ubuntu4 dpkg-dev_1.19.6ubuntu1 g++-8_8.3.0-6ubuntu1 gcc-8_8.3.0-6ubuntu1 libc6-dev_2.29-0ubuntu2 libstdc++-8-dev_8.3.0-6ubuntu1 libstdc++6_9-20190420-1ubuntu1 linux-libc-dev_5.0.0-13.14 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-1 apt_1.8.0 autoconf_2.69-11 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1ubuntu10 base-passwd_3.5.46 bash_5.0-3ubuntu1 binutils_2.32-7ubuntu4 binutils-arm-linux-gnueabihf_2.32-7ubuntu4 binutils-common_2.32-7ubuntu4 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.33.1-0.1ubuntu2 build-essential_12.6ubuntu1 bzip2_1.0.6-9 ca-certificates_20190110 cmake_3.13.4-1 cmake-data_3.13.4-1 coreutils_8.30-1ubuntu1 cpp_4:8.3.0-1ubuntu3 cpp-8_8.3.0-6ubuntu1 d-shlibs_0.84ubuntu2 dash_0.5.10.2-4ubuntu1 debconf_1.5.71 debhelper_12.1.1ubuntu1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-2 dmsetup_2:1.02.145-4.1ubuntu4 doxygen_1.8.13-10ubuntu1 dpkg_1.19.6ubuntu1 dpkg-dev_1.19.6ubuntu1 dwz_0.12-3 e2fslibs_1.44.6-1 e2fsprogs_1.44.6-1 fakeroot_1.23-1 fdisk_2.33.1-0.1ubuntu2 file_1:5.35-4 findutils_4.6.0+git+20190209-2 fontconfig_2.13.1-2ubuntu2 fontconfig-config_2.13.1-2ubuntu2 fonts-dejavu-core_2.37-1 g++_4:8.3.0-1ubuntu3 g++-8_8.3.0-6ubuntu1 gcc_4:8.3.0-1ubuntu3 gcc-8_8.3.0-6ubuntu1 gcc-8-base_8.3.0-6ubuntu1 gcc-9-base_9-20190420-1ubuntu1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpg_2.2.12-1ubuntu3 gpg-agent_2.2.12-1ubuntu3 gpgconf_2.2.12-1ubuntu3 gpgv_2.2.12-1ubuntu3 graphviz_2.40.1-6 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hdf5-helpers_1.10.4+repack-10 hostname_3.21 init_1.56+nmu1 init-system-helpers_1.56+nmu1 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libaec-dev_1.0.2-1 libaec0_1.0.2-1 libapparmor1_2.13.2-9ubuntu6 libapt-pkg5.0_1.8.0 libarchive-zip-perl_1.64-1 libarchive13_3.3.3-4 libargon2-1_0~20171227-0.2 libasan5_9-20190420-1ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-2.1 libassuan0_2.5.2-1 libatomic1_9-20190420-1ubuntu1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.3-1ubuntu3 libaudit1_1:2.8.3-1ubuntu3 libbinutils_2.32-7ubuntu4 libblkid1_2.33.1-0.1ubuntu2 libboost-dev_1.67.0.1 libboost1.67-dev_1.67.0-13 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.29-0ubuntu2 libc-dev-bin_2.29-0ubuntu2 libc6_2.29-0ubuntu2 libc6-dev_2.29-0ubuntu2 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2 libcap2_1:2.25-2 libcc1-0_9-20190420-1ubuntu1 libcdt5_2.40.1-6 libcgraph6_2.40.1-6 libclang1-7_1:7.0.1-8 libcom-err2_1.44.6-1 libcomerr2_1.44.6-1 libcppunit-1.14-0_1.14.0-3 libcppunit-dev_1.14.0-3 libcroco3_0.6.12-3 libcryptsetup12_2:2.1.0-1ubuntu1 libcurl4_7.64.0-2ubuntu1 libdatrie1_0.2.12-2 libdb5.3_5.3.28+dfsg1-0.5 libdebconfclient0_0.247ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu4 libdpkg-perl_1.19.6ubuntu1 libedit2_3.1-20181209-1 libelf1_0.176-1 libexpat1_2.2.6-1 libext2fs2_1.44.6-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1ubuntu2 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.1.2-1 libfontconfig1_2.13.1-2ubuntu2 libfreetype6_2.9.1-3 libfribidi0_1.0.5-3.1 libgcc-8-dev_8.3.0-6ubuntu1 libgcc1_1:9-20190420-1ubuntu1 libgcrypt20_1.8.4-3ubuntu1 libgd3_2.2.5-5.1 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libgfortran5_9-20190420-1ubuntu1 libglib2.0-0_2.60.0-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2ubuntu1 libgomp1_9-20190420-1ubuntu1 libgpg-error0_1.35-1 libgraphite2-3_1.3.13-7 libgssapi-krb5-2_1.17-1 libgssapi3-heimdal_7.5.0+dfsg-2.1 libgts-0.7-5_0.7.6+darcs121130-4 libgvc6_2.40.1-6 libgvpr2_2.40.1-6 libharfbuzz0b_2.3.1-1 libhcrypto4-heimdal_7.5.0+dfsg-2.1 libhdf5-103_1.10.4+repack-10 libhdf5-cpp-103_1.10.4+repack-10 libhdf5-dev_1.10.4+repack-10 libheimbase1-heimdal_7.5.0+dfsg-2.1 libheimntlm0-heimdal_7.5.0+dfsg-2.1 libhogweed4_3.4.1-1 libhx509-5-heimdal_7.5.0+dfsg-2.1 libice6_2:1.0.9-2 libicu63_63.1-6 libidn11_1.33-2.2ubuntu2 libidn2-0_2.0.5-1 libip4tc0_1.6.1-2ubuntu3 libisl19_0.20-2 libjbig0_2.1-3.1build1 libjpeg-dev_8c-2ubuntu8 libjpeg-turbo8_2.0.1-0ubuntu2 libjpeg-turbo8-dev_2.0.1-0ubuntu2 libjpeg8_8c-2ubuntu8 libjpeg8-dev_8c-2ubuntu8 libjson-c3_0.12.1+ds-2 libjsoncpp-dev_1.7.4-3 libjsoncpp1_1.7.4-3 libk5crypto3_1.17-1 libkeyutils1_1.6-6 libkmod2_25-1ubuntu4 libkrb5-26-heimdal_7.5.0+dfsg-2.1 libkrb5-3_1.17-1 libkrb5support0_1.17-1 liblab-gamut1_2.40.1-6 libldap-2.4-2_2.4.47+dfsg-3ubuntu2 libldap-common_2.4.47+dfsg-3ubuntu2 libllvm7_1:7.0.1-8 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 libltdl7_2.4.6-10 liblz4-1_1.8.3-1ubuntu1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1ubuntu2 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses6_6.1+20181013-2ubuntu2 libncursesw6_6.1+20181013-2ubuntu2 libnettle6_3.4.1-1 libnghttp2-14_1.36.0-2 libnpth0_1.6-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5ubuntu1 libpam-modules-bin_1.3.1-5ubuntu1 libpam-runtime_1.3.1-5ubuntu1 libpam0g_1.3.1-5ubuntu1 libpango-1.0-0_1.42.4-6 libpangocairo-1.0-0_1.42.4-6 libpangoft2-1.0-0_1.42.4-6 libpathplan4_2.40.1-6 libpcre3_2:8.39-12 libperl5.28_5.28.1-6 libpipeline1_1.5.1-2 libpixman-1-0_0.36.0-1 libpng16-16_1.6.36-6 libprocps7_2:3.3.15-2ubuntu2 libpsl5_0.20.2-2 libreadline7_7.0-5 libreadline8_8.0-1 librhash0_1.3.8-1 libroken18-heimdal_7.5.0+dfsg-2.1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-3ubuntu2 libselinux1_2.8-1build2 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libslang2_2.3.2-1ubuntu1 libsm6_2:1.2.3-1 libsmartcols1_2.33.1-0.1ubuntu2 libsqlite3-0_3.27.2-2 libss2_1.44.6-1 libssh-4_0.8.6-3 libssl1.1_1.1.1b-1ubuntu2 libstdc++-8-dev_8.3.0-6ubuntu1 libstdc++6_9-20190420-1ubuntu1 libsystemd0_240-6ubuntu5 libsz2_1.0.2-1 libtasn1-6_4.13-3 libthai-data_0.1.28-2 libthai0_0.1.28-2 libtiff5_4.0.10-4 libtinfo6_6.1+20181013-2ubuntu2 libtool_2.4.6-10 libubsan1_9-20190420-1ubuntu1 libuchardet0_0.0.6-3 libudev1_240-6ubuntu5 libunistring2_0.9.10-1ubuntu2 libusb-0.1-4_2:0.1.12-32 libuuid1_2.33.1-0.1ubuntu2 libuv1_1.24.1-1 libwebp6_0.6.1-2 libwind0-heimdal_7.5.0+dfsg-2.1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxapian30_1.4.10-1 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1 libxml2_2.9.4+dfsg1-7ubuntu3 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_5.0.0-13.14 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu2 lsb-base_10.2019031300ubuntu1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17ubuntu3 mount_2.33.1-0.1ubuntu2 multiarch-support_2.29-0ubuntu2 ncurses-base_6.1+20181013-2ubuntu2 ncurses-bin_6.1+20181013-2ubuntu2 openssl_1.1.1b-1ubuntu2 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu2 patch_2.7.6-3 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 pinentry-curses_1.1.0-1build2 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu2 readline-common_8.0-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-gatb-core-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_240-6ubuntu5 systemd-sysv_240-6ubuntu5 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 tar_1.30+dfsg-5 tzdata_2019a-1 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1ubuntu2 x11-common_1:7.7+19ubuntu12 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu2 zlib1g-dev_1:1.2.11.dfsg-1ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Thu Jan 24 13:18:48 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./gatb-core_1.4.1+git20181225.44d5a44+dfsg-1.dsc dpkg-source: info: extracting gatb-core in gatb-core-1.4.1+git20181225.44d5a44+dfsg dpkg-source: info: unpacking gatb-core_1.4.1+git20181225.44d5a44+dfsg.orig.tar.xz dpkg-source: info: unpacking gatb-core_1.4.1+git20181225.44d5a44+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_hdf5.patch dpkg-source: info: applying fix_hdf5_includes.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying fix_install_location.patch dpkg-source: info: applying set_soversion.patch dpkg-source: info: applying dynamic_linking_of_tools.patch dpkg-source: info: applying multiarch.patch dpkg-source: info: applying spelling.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-16663214 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-16663214 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-16663214 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package gatb-core dpkg-buildpackage: info: source version 1.4.1+git20181225.44d5a44+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --sourcedirectory=gatb-core dh_auto_clean -O--sourcedirectory=gatb-core dh_autoreconf_clean -O--sourcedirectory=gatb-core dh_clean -O--sourcedirectory=gatb-core debian/rules build-arch dh build-arch --sourcedirectory=gatb-core dh_update_autotools_config -a -O--sourcedirectory=gatb-core dh_autoreconf -a -O--sourcedirectory=gatb-core dh_auto_configure -a -O--sourcedirectory=gatb-core cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf ../gatb-core -- The C compiler identification is GNU 8.3.0 -- The CXX compiler identification is GNU 8.3.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- CppUnit: found headers (in /usr/include) but not the static library (/usr/include/../lib/libcppunit.a) -- CppUnit FOUND (/usr/include) -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of __uint128 -- Check size of __uint128 - failed -- Check size of __uint128_t -- Check size of __uint128_t - failed -- Options: -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.4") -- HDF5_LIBRARIES="/usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so/usr/lib/arm-linux-gnueabihf/libpthread.so/usr/lib/arm-linux-gnueabihf/libsz.so/usr/lib/arm-linux-gnueabihf/libz.so/usr/lib/arm-linux-gnueabihf/libdl.so/usr/lib/arm-linux-gnueabihf/libm.so" -- OPTIMIZED KMER SIZES INTERVALS ARE 32 64 96 128 <-- max supported kmer size without recompilation CMake Warning (dev) at CMakeLists.txt:238 (set): Cannot set "gatb-core-klist": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- ---------- GATB TESTS ---------- -- ---------- GATB TOOLS ---------- DYNAMIC BINARIES for dbgh5 DYNAMIC BINARIES for dbginfo DYNAMIC BINARIES for leon -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.4") found components: C CMake Warning (dev) at CMakeLists.txt:265 (set): Cannot set "gatb-core-flags": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:266 (set): Cannot set "gatb-core-includes": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:267 (set): Cannot set "gatb-core-libraries": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:268 (set): Cannot set "gatb-core-cmake": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Doxygen: /usr/bin/doxygen (found version "1.8.13") found components: doxygen dot -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf debian/rules override_dh_auto_build-arch make[1]: Entering directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg' dh_auto_build -a cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core -B/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/CMakeFiles /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/depend make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/depend make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/depend make[4]: Entering directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/CMakeFiles/gatbcore-dynamic.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/thirdparty /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/thirdparty/CMakeFiles/thirdparty_copy.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/CMakeFiles/gatbcore-static.dir/DependInfo.cmake --color= Scanning dependencies of target thirdparty_copy make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/build make[4]: Entering directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E make_directory /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/json cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E make_directory /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E copy_if_different /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty/BooPHF/BooPHF.h /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/ cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/thirdparty && /usr/bin/cmake -E copy_if_different /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty/json/json.hpp /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/json/ make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' [ 0%] Built target thirdparty_copy Scanning dependencies of target gatbcore-static make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/build Scanning dependencies of target gatbcore-dynamic make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/build make[4]: Entering directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' [ 1%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp [ 1%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankAlbum.cpp [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp [ 2%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function ‘bool gatb::core::bank::impl::checkMagic(FILE*)’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread (&value, sizeof(value), 1, file); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function ‘virtual void gatb::core::bank::impl::BankBinary::Iterator::next()’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/Bank.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankFasta.cpp [ 3%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankHelpers.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankAlbum.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankRandom.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankSplitter.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp [ 6%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function ‘bool gatb::core::bank::impl::checkMagic(FILE*)’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread (&value, sizeof(value), 1, file); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function ‘virtual void gatb::core::bank::impl::BankBinary::Iterator::next()’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp: In function ‘long unsigned int gatb::core::debruijn::impl::logging(std::__cxx11::string)’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:33: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem, memMaxProcess); ~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:33: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] [ 6%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp [ 7%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 8%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 9%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankFasta.cpp In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 [ 9%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ [ 10%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 10%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankHelpers.cpp [ 10%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp [ 10%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp [ 11%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankRandom.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 11%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/impl/BankSplitter.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 [ 12%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 13%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 13%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp [ 14%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ [ 14%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp [ 15%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp [ 15%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 15%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Configuration.cpp In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp: In function ‘long unsigned int gatb::core::debruijn::impl::logging(std::__cxx11::string)’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:33: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] snprintf (tmp, sizeof(tmp), " memory [current, maxRSS]: [%4lu, %4lu] MB ", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem, memMaxProcess); ~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/logging.cpp:31:33: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 15%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 16%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp [ 17%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 [ 17%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 [ 17%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp [ 18%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 18%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp [ 19%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 [ 19%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 19%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 20%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp [ 21%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp [ 21%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/ModelData.cpp [ 22%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp: In member function ‘void gatb::core::kmer::impl::Repartitor::printInfo()’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:308:12: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] printf("Repartitor : nbMinimizers=%ld\n", nbMinimizers); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:309:61: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] for (u_int64_t ii=0; ii>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Repartitor::itriple&}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Repartitor::itriple}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::Repartitor::computeDistrib(const gatb::core::kmer::impl::PartiInfo<5>&)’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 22%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 22%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 22%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 [ 23%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 23%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 26%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp [ 27%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 27%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp: In constructor ‘gatb::core::system::impl::ThreadLinux::ThreadLinux(void* (*)(void*), void*)’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp:51:7: warning: variable ‘ret’ set but not used [-Wunused-but-set-variable] int ret = pthread_attr_init ( &tattr ) ; ^~~ [ 27%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp [ 28%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ [ 29%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function ‘kmer_type DnaDecoder::extendAnchor(kmer_type, int, bool)’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function ‘void DnaDecoder::decodeAnchorRead()’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 30%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 30%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Configuration.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void DnaEncoder::buildKmers()’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp [ 31%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.cpp [ 31%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp [ 31%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 31%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:71, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here class NativeInt64 ^~~~~~~~~~~ [ 32%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp [ 33%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/api/Data.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/api/Data.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.cpp [ 33%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp [ 33%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp [ 34%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp [ 35%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp [ 35%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 35%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/ModelData.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 36%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 37%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp: In member function ‘void gatb::core::kmer::impl::Repartitor::printInfo()’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:308:12: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] printf("Repartitor : nbMinimizers=%ld\n", nbMinimizers); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:309:61: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] for (u_int64_t ii=0; ii>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Repartitor::itriple&}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Repartitor::itriple}; _Tp = gatb::core::kmer::impl::Repartitor::itriple; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 [ 37%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::Repartitor::computeDistrib(const gatb::core::kmer::impl::PartiInfo<5>&)’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp:20: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp [ 37%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::ProgressTimerAndSystem::fillBuffer(double)’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:352:9: mem, _memMax, memMaxProcess ~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] [ 38%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp [ 39%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp [ 39%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::Properties::setInt(const string&, const int64_t&)’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp:438:39: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘int64_t’ {aka ‘long long int’} [-Wformat=] snprintf (buffer, sizeof(buffer), "%ld", value); ^~~~~ ~~~~~ [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.cpp [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 41%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void Leon::decodeAnchorDict()’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp /usr/include/c++/8/bits/stl_vector.h: In member function ‘void Leon::startDecompression_setup()’: /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp: In constructor ‘gatb::core::system::impl::ThreadLinux::ThreadLinux(void* (*)(void*), void*)’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/ThreadLinux.cpp:51:7: warning: variable ‘ret’ set but not used [-Wunused-but-set-variable] int ret = pthread_attr_init ( &tattr ) ; ^~~ [ 42%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp [ 43%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Tool.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp: In member function ‘kmer_type DnaDecoder::extendAnchor(kmer_type, int, bool)’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:205:23: warning: array subscript 255 is above array bounds of ‘const int [5]’ [-Warray-bounds] return bin2ntTab[nt]; ~~~~~~~~~~~~^ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void DnaEncoder::buildKmers()’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp [ 46%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:13:17: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::tools::storage::impl::SuperKmerBinFiles::SuperKmerBinFiles(const string&, const string&, size_t)’: /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 46%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/RangeCoder.cpp [ 47%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp [ 47%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/api/Data.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/api/Data.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:71, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:48, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/Bloom.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here class NativeInt64 ^~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 128]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp [ 48%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:13:17: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp [ 48%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 32]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:13:17: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp:20: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 50%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp [ 51%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 64]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:13:17: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ [ 51%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp [ 51%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::ProgressTimerAndSystem::fillBuffer(double)’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] snprintf (tmp, sizeof(tmp), " cpu: %5.1f %% mem: [%4lu, %4lu, %4lu] MB ", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:352:9: mem, _memMax, memMaxProcess ~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Progress.cpp:350:33: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘u_int64_t’ {aka ‘long long unsigned int’} [-Wformat=] [ 51%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 96]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::Properties::setInt(const string&, const int64_t&)’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Property.cpp:438:39: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘int64_t’ {aka ‘long long int’} [-Wformat=] snprintf (buffer, sizeof(buffer), "%ld", value); ^~~~~ ~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:3: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:31:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable ‘debug_index’ [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable ‘first_index’ [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ [ 52%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/IMemory.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/gatb_core.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void Leon::decodeAnchorDict()’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function ‘void Leon::startDecompression_setup()’: /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ [ 53%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp [ 53%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp [ 54%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Tool.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:3: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:31:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable ‘debug_index’ [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable ‘first_index’ [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ [ 54%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<32>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<32>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<32>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<32>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ [ 54%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:13:17: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<128>&}; _Tp = gatb::core::debruijn::impl::markedSeq<128>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::tools::storage::impl::SuperKmerBinFiles::SuperKmerBinFiles(const string&, const string&, size_t)’: /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 128]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<32>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<32>::KmerCanonical; unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 128]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 128]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<32>&}; _Tp = gatb::core::debruijn::impl::markedSeq<32>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:13:17: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 } ^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp In file included from /usr/include/c++/8/bits/char_traits.h:39, from /usr/include/c++/8/string:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/api/ICell.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Cell.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algobase.h: In function ‘void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >]’: /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 32]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<128>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<128>]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:13:17: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 } ^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]::UniquifyKeys]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 64]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 } ^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128]::’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]::InsertTravellerKmer]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<32>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<32>]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:13:17: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Bag.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::Kmer::SuperKmer::addKmer(gatb::core::kmer::impl::Kmer::SuperKmer::Kmer) [with unsigned int span = 96]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32]::’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 57%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:3: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:31:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable ‘debug_index’ [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable ‘first_index’ [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 58%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:3: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:31:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable ‘debug_index’ [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable ‘first_index’ [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ [ 58%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<32>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<32>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<32>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<32>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:3: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:31:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable ‘debug_index’ [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable ‘first_index’ [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:3: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:31:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable ‘debug_index’ [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable ‘first_index’ [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<128>&}; _Tp = gatb::core::debruijn::impl::markedSeq<128>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<32>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<32>::KmerCanonical; unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<32>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<32>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<128>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<128>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_val > >]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 128]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<32>&}; _Tp = gatb::core::debruijn::impl::markedSeq<32>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 128]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_val > >]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 128]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<32>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<32>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 32]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/bits/char_traits.h:39, from /usr/include/c++/8/string:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/api/ICell.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Cell.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algobase.h: In function ‘void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >]’: /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b) ^~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::iter_swap(__result, __b); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::iter_swap(__result, __c); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::iter_swap(__result, __a); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<64>&}; _Tp = gatb::core::debruijn::impl::markedSeq<64>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 } ^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<64>&}; _Tp = gatb::core::debruijn::impl::markedSeq<64>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 } ^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<64>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<64>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<128>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<128>]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 } ^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 32]::UniquifyKeys]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 } ^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]::InsertTravellerKmer]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 } ^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<32>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<32>]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 64]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 128]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 128]::’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]::UniquifyKeys]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 } ^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]::InsertTravellerKmer]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 64]::UniquifyKeys]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/Command.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:14, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 } ^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:331:9: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<64>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<64>]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 32]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::bank::Sequence; Functor = gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]::InsertTravellerKmer]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 32]::’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<64>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<64>]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64]::’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 64]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 64]::’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:3: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:31:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable ‘debug_index’ [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable ‘first_index’ [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 128; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<128>::SuperKmer]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ [ 59%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here class NativeInt64 ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ [ 59%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 32; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<>::SuperKmer]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here class NativeInt64 ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:3: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp: In instantiation of ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:31:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.cpp:236:10: warning: unused variable ‘debug_index’ [-Wunused-variable] uint debug_index = 0; ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long long unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:765:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("final hash %12lu bits (%.2f %%) (nb in final hash %lu)\n", ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:841:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘std::unordered_map, std::equal_to, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp: In instantiation of ‘void gatb::core::debruijn::impl::determine_order_sequences(std::vector >&, const std::vector >&, int, bool) [with int SPAN = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1106:48: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96; std::__cxx11::string = std::__cxx11::basic_string]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:29:9: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:258:18: warning: unused variable ‘first_index’ [-Wunused-variable] uint32_t first_index = markedSequence_index; ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 128]::ptcfcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<96>&}; _Tp = gatb::core::debruijn::impl::markedSeq<96>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >; _Distance = int; _Tp = std::tuple, std::allocator > >; _Compare = __gnu_cxx::__ops::_Iter_comp_val, std::allocator > > > >]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Distance = int; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 96]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 128]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 96]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, std::allocator > >}; _Tp = std::tuple, std::allocator > >; _Alloc = std::allocator, std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::markedSeq<96>&}; _Tp = gatb::core::debruijn::impl::markedSeq<96>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:35, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 32]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 } ^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple, unsigned int, unsigned int, unsigned int>}; _Tp = std::tuple, unsigned int, unsigned int, unsigned int>; _Alloc = std::allocator, unsigned int, unsigned int, unsigned int> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run_delayed(_Args&& ..., std::weak_ptr) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function ‘static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = std::unique_ptr; _Functor = std::__future_base::_Task_setter, std::__future_base::_Result_base::_Deleter>, std::__future_base::_Task_state<_Fn, _Alloc, _Res(_Args ...)>::_M_run(_Args&& ...) [with _Fn = std::_Bind(std::_Placeholder<1>)>; _Alloc = std::allocator; _Res = void; _Args = {int}]::, void>; _ArgTypes = {}]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gatb::core::debruijn::impl::kmerIndiceT<96>}; _Tp = gatb::core::debruijn::impl::kmerIndiceT<96>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::graph3::debruijn() [with unsigned int span = 96]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/ograph.h:15, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:5, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool)::InsertTravellerKmer::operator()(const gatb::core::bank::Sequence&) [with unsigned int SPAN = 96]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In lambda function: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 128]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::prepare_uf(std::__cxx11::string, gatb::core::bank::IBank*, int, int&, int, int, uint64_t&, uint64_t) [with int SPAN = 96]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<96>]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 32]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 } ^ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:1183:1: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96]::’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::debruijn::impl::InsertIntoQueues<96>]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BagCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/CollectionCache.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:41, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void gatb::core::debruijn::impl::bcalm2(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, int, int, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, unsigned int, unsigned int, unsigned int>*, std::vector, unsigned int, unsigned int, unsigned int>, std::allocator, unsigned int, unsigned int, unsigned int> > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In function ‘void gatb::core::debruijn::impl::link_tigs(std::__cxx11::string, int, int, uint64_t&, bool) [with unsigned int SPAN = 96]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 59%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/Iterator.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Iterable.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/api/Collection.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.hpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp:1, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::__cxx11::string, int, int, int, bool) [with unsigned int SPAN = 96]::’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ [ 60%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 64; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<64>::SuperKmer]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here class NativeInt64 ^~~~~~~~~~~ [ 61%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 128]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 128; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<128>::SuperKmer]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here class NativeInt64 ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 96; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<96>::SuperKmer]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here class NativeInt64 ^~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 64]::ptcfcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 128]::ptcfcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 96]::ptcfcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 64]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 128]’: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<4>]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>]’: /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<4>]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::binary_search (_items.begin(), _items.end(), item); ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 128]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:7: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateIncomingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateOutgoingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 128]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 128]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 96]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 64]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 128]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 61%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 96]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<128>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 128]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<1>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 32]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 62%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp [ 62%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<1>]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 32]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 32]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 32]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 32; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<>::SuperKmer]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<2>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here class NativeInt64 ^~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 [ 63%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 64]’: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<2>]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 128; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable ‘abundance’ [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 64]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 96]’: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<3>]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>]’: /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<3>]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::binary_search (_items.begin(), _items.end(), item); ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:7: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<96>::Count, gatb::core::tools::math::LargeInt<3> >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 63%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp [ 63%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 96]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 32]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 32]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 32; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable ‘abundance’ [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 64; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable ‘abundance’ [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ [ 64%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 32]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 96; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable ‘abundance’ [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ [ 64%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp [ 65%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 32]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 65%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ [ 66%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 64]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 64; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<64>::SuperKmer]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here class NativeInt64 ^~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 64]::ptcfcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 64]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 64]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 64]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<64>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 64]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:7: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:7: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:563:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:587:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:599:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:708:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:715:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountFileNames.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp: In instantiation of ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:556:22: required from ‘void gatb::core::kmer::impl::PartitionsByHashCommand::execute() [with unsigned int span = 96]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:14:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:239:27: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] while(filenames.size() > _reduceTarget) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:257:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:265:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:271:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:335:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, short unsigned int> >*, std::allocator, short unsigned int> >*> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< _tmpCountIterators.size(); ii++) /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:342:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii< currentFiles.size(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:117:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=0; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:120:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int jj=0; jj<= _histogram->getLength2(); jj++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:135:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] for(int ii=1; ii<= _histogram->getLength(); ii++) ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In instantiation of ‘void gatb::core::kmer::impl::Kmer::SuperKmer::save(gatb::core::tools::storage::impl::CacheSuperKmerBinFiles&, int) [with unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1057:5: required from ‘void gatb::core::kmer::impl::FillPartitions::processSuperkmer(gatb::core::kmer::impl::FillPartitions::SuperKmer&) [with unsigned int span = 96; gatb::core::kmer::impl::FillPartitions::SuperKmer = gatb::core::kmer::impl::Kmer<96>::SuperKmer]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:1048:8: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1442:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] while(uid<4 && skid < superKmerLen) ~~~~~^~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1460:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] if(skid >= superKmerLen) break; ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/api/ICountProcessor.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt64; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt64]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt64’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/LargeInt.hpp:42, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/Integer.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt64.hpp:48:7: note: ‘class gatb::core::tools::math::NativeInt64’ declared here class NativeInt64 ^~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:7: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 __push_heap(_RandomAccessIterator __first, ^~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::execute() [with unsigned int span = 96]::ptcfcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::ptcfcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; _Distance = int; _Tp = std::pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_val::kxpcomp>]’: /usr/include/c++/8/bits/stl_heap.h:128:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >, std::allocator > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair >}; _Tp = std::pair >; _Alloc = std::allocator > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘std::vector > gatb::core::kmer::impl::TempCountFileMerger::mergeFiles(std::vector >) [with unsigned int span = 96]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand::executeDump() [with unsigned int span = 96]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::kmer::impl::PartitionsByVectorCommand_multibank::executeDump() [with unsigned int span = 96]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>&}; _Tp = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; _Alloc = std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:24, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘void gatb::core::kmer::impl::Sequence2SuperKmer::KmerFunctor::operator()(const KType&, size_t) [with KType = gatb::core::kmer::impl::Kmer<96>::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>; unsigned int span = 96]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>*, std::vector::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex>, std::allocator::KmerMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ComparatorMinimizerFrequencyOrLex> > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 67%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp [ 67%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ [ 67%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __lower_bound(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 [ 67%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<4>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 [ 68%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 68%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 128]’: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<4>]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] /usr/include/c++/8/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>]’: /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<4>]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::binary_search (_items.begin(), _items.end(), item); ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:7: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateIncomingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::kmer::impl::Kmer::ModelAbstract::iterateOutgoingNeighbors(const Type&, Functor&, const std::bitset<4>&) const [with Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<128>::Count, gatb::core::tools::math::LargeInt<4> >::FunctorNeighbors; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 128]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __lower_bound(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<3>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 69%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ [ 70%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ [ 70%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<1>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 32]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<1>]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:7: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 32]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 [ 70%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<2>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 64]’: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<2>]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 64]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp [ 71%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::tools::math::NativeInt8; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::tools::math::NativeInt8]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘class gatb::core::tools::math::NativeInt8’; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:45, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/math/NativeInt8.hpp:44:7: note: ‘class gatb::core::tools::math::NativeInt8’ declared here class NativeInt8 : private misc::ArrayData ^~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair >*>; _KeyOfValue = std::_Select1st >*> >; _Compare = std::less; _Alloc = std::allocator >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::tools::collections::impl::BagCache >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree >*>, std::_Select1st >*> >, std::less, std::allocator >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::kmer::impl::FinalizeCmd::execute() [with unsigned int span = 96]’: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In function ‘gatb::core::tools::collections::Container* gatb::core::tools::storage::impl::StorageTools::loadContainer(gatb::core::tools::storage::impl::Group&, const string&) [with T = gatb::core::tools::math::LargeInt<3>]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘bool std::binary_search(_FIter, _FIter, const _Tp&) [with _FIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>]’: /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 binary_search(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:2247:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageTools.hpp:38, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:50, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp: In member function ‘bool gatb::core::tools::collections::impl::ContainerSet::contains(const Item&) [with Item = gatb::core::tools::math::LargeInt<3>]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/ContainerSet.hpp:69:35: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::binary_search (_items.begin(), _items.end(), item); ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:7: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp: In member function ‘void gatb::core::tools::dp::IDispatcher::IteratorCommand::execute() [with Item = gatb::core::kmer::impl::Kmer<96>::Count; Functor = gatb::core::kmer::impl::FunctorKmersExtensionMinimizer::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::ModelMinimizer::ModelCanonical>, gatb::core::kmer::impl::Kmer<96>::Count, gatb::core::tools::math::LargeInt<3> >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp:137:36: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 if (std::binary_search (_solids.begin(), _solids.end(), neighbor)==false) ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::kmer::impl::DebloomAlgorithm::createCFP(gatb::core::tools::collections::Collection::Type>*, gatb::core::tools::misc::IProperties*, u_int64_t&) [with unsigned int span = 96]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 128; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable ‘abundance’ [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 71%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 32; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable ‘abundance’ [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 [ 73%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 64; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable ‘abundance’ [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 [ 73%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 128]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp: In instantiation of ‘void gatb::core::kmer::impl::MPHFAlgorithm::check() [with unsigned int span = 96; Abundance_t = unsigned char; NodeState_t = unsigned char]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:13:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:311:21: warning: unused variable ‘abundance’ [-Wunused-variable] Abundance_t abundance = (*_abundanceMap)[count.value]; ^~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<128>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 [ 75%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 76%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 32]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<32>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 64]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 96]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<64>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<96>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 77%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 78%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 78%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp [ 78%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:7: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 [ 78%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ [ 78%] Linking CXX shared library ../lib/None/libgatbcore.so cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatbcore-dynamic.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libgatbcore.so.2 -o ../lib/None/libgatbcore.so.2 CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/api/Data.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.rodata+0x1b0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x1b0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.data.rel.ro+0xc): multiple definition of `typeinfo for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0xc): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.rodata+0x368): multiple definition of `typeinfo name for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x368): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.data.rel.ro+0x18): multiple definition of `typeinfo for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0x18): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.rodata+0x520): multiple definition of `typeinfo name for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x520): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.data.rel.ro+0x24): multiple definition of `typeinfo for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0x24): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.rodata+0x6d4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.data.rel.ro+0x30): multiple definition of `typeinfo for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.rodata+0x884): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.rodata+0x1b0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.data.rel.ro+0x3c): multiple definition of `typeinfo for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.data.rel.ro+0xc): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.rodata+0xa38): multiple definition of `typeinfo name for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.rodata+0x364): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.data.rel.ro+0x48): multiple definition of `typeinfo for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.data.rel.ro+0x18): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.rodata+0xbf0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.data.rel.ro+0x54): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.rodata+0xda0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.rodata+0x1b0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.data.rel.ro+0x5c): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.data.rel.ro+0x8): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.rodata+0xf58): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.rodata+0x368): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o:(.data.rel.ro+0x68): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.data.rel.ro+0x14): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.rodata+0x1b0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x1b0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.data.rel.ro+0xc): multiple definition of `typeinfo for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0xc): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.rodata+0x368): multiple definition of `typeinfo name for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x368): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.data.rel.ro+0x18): multiple definition of `typeinfo for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0x18): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.rodata+0x520): multiple definition of `typeinfo name for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x520): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.data.rel.ro+0x24): multiple definition of `typeinfo for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0x24): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.rodata+0x6d4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.data.rel.ro+0x30): multiple definition of `typeinfo for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.rodata+0x884): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.rodata+0x1b0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.data.rel.ro+0x3c): multiple definition of `typeinfo for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.data.rel.ro+0xc): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.rodata+0xa38): multiple definition of `typeinfo name for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.rodata+0x364): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.data.rel.ro+0x48): multiple definition of `typeinfo for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.data.rel.ro+0x18): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.rodata+0xbf0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.data.rel.ro+0x54): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.rodata+0xda0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.rodata+0x1b0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.data.rel.ro+0x5c): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.data.rel.ro+0x8): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.rodata+0xf58): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.rodata+0x368): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o:(.data.rel.ro+0x68): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.data.rel.ro+0x14): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.rodata+0x1b0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x1b0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.data.rel.ro+0xc): multiple definition of `typeinfo for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0xc): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.rodata+0x368): multiple definition of `typeinfo name for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x368): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.data.rel.ro+0x18): multiple definition of `typeinfo for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0x18): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.rodata+0x520): multiple definition of `typeinfo name for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x520): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.data.rel.ro+0x24): multiple definition of `typeinfo for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0x24): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.rodata+0x6d4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.data.rel.ro+0x30): multiple definition of `typeinfo for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.rodata+0x884): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.rodata+0x1b0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.data.rel.ro+0x3c): multiple definition of `typeinfo for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.data.rel.ro+0xc): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.rodata+0xa38): multiple definition of `typeinfo name for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.rodata+0x364): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.data.rel.ro+0x48): multiple definition of `typeinfo for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.data.rel.ro+0x18): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.rodata+0xbf0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.data.rel.ro+0x54): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.rodata+0xda0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.rodata+0x1b0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.data.rel.ro+0x5c): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.data.rel.ro+0x8): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.rodata+0xf58): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.rodata+0x368): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o:(.data.rel.ro+0x68): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.data.rel.ro+0x14): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.rodata+0x0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::TraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.rodata+0x1b0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x1b0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.data.rel.ro+0xc): multiple definition of `typeinfo for gatb::core::debruijn::impl::MonumentTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0xc): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.rodata+0x368): multiple definition of `typeinfo name for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x368): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.data.rel.ro+0x18): multiple definition of `typeinfo for gatb::core::debruijn::impl::SimplePathsTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0x18): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.rodata+0x520): multiple definition of `typeinfo name for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.rodata+0x520): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.data.rel.ro+0x24): multiple definition of `typeinfo for gatb::core::debruijn::impl::NullTraversalTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o:(.data.rel.ro+0x24): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.rodata+0x6d4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.data.rel.ro+0x30): multiple definition of `typeinfo for gatb::core::debruijn::impl::TerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.rodata+0x884): multiple definition of `typeinfo name for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.rodata+0x1b0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.data.rel.ro+0x3c): multiple definition of `typeinfo for gatb::core::debruijn::impl::MPHFTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.data.rel.ro+0xc): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.rodata+0xa38): multiple definition of `typeinfo name for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.rodata+0x364): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.data.rel.ro+0x48): multiple definition of `typeinfo for gatb::core::debruijn::impl::BranchingTerminatorTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o:(.data.rel.ro+0x18): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.rodata+0xbf0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.data.rel.ro+0x54): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.rodata+0xda0): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.rodata+0x1b0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.data.rel.ro+0x5c): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineBranchingTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.data.rel.ro+0x8): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.rodata+0xf58): multiple definition of `typeinfo name for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.rodata+0x368): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o:(.data.rel.ro+0x68): multiple definition of `typeinfo for gatb::core::debruijn::impl::FrontlineReachableTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o:(.data.rel.ro+0x14): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o:(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o:(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o:(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o:(.rodata+0x4): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o:(.rodata+0x314): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o:(.rodata+0x314): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o:(.rodata+0x314): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o:(.rodata+0x314): multiple definition of `typeinfo name for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.rodata+0x0): first defined here /usr/bin/ld: CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o:(.data.rel.ro+0x0): multiple definition of `typeinfo for gatb::core::debruijn::impl::Simplifications, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96u>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128u>, boost::mpl::l_end> > > > >> >, gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >'; CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o:(.data.rel.ro+0x0): first defined here collect2: error: ld returned 1 exit status make[4]: *** [src/CMakeFiles/gatbcore-dynamic.dir/build.make:1602: lib/None/libgatbcore.so.2] Error 1 make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make[3]: *** [CMakeFiles/Makefile2:192: src/CMakeFiles/gatbcore-dynamic.dir/all] Error 2 make[3]: *** Waiting for unfinished jobs.... [ 79%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 79%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<4>; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __lower_bound(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<4>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<4>&}; _Tp = gatb::core::tools::math::LargeInt<4>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Distance = int; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ [ 80%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:7: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 32; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:7: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >}; _Tp = gatb::core::debruijn::impl::NodeDepth, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::debruijn::impl::NodeDepth > >}; _Tp = gatb::core::debruijn::impl::NodeDepth > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<1>&}; _Tp = gatb::core::tools::math::LargeInt<1>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 [ 80%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:7: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<2>&}; _Tp = gatb::core::tools::math::LargeInt<2>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::IterativeExtensions::construct_linear_seqs(const string&, const string&, gatb::core::bank::IBank*, bool) [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph_t = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 80%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:852:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] if (debug) printf("%lu-bubble mean %d, stdev %.1f\n",consensuses.size(),mean,stdev); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In instantiation of ‘bool gatb::core::debruijn::impl::MonumentTraversalTemplate::validate_consensuses(std::set >&, gatb::core::debruijn::impl::Path_t&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:18:16: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:714:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::set > >, std::less > > >, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wformat=] [ 81%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<96>::Count}; _Tp = gatb::core::kmer::impl::Kmer<96>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<3> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<3> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<3> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<3> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<3> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<3> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, [ 81%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<96>::Count; Type = gatb::core::tools::math::LargeInt<3>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<96>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In function ‘_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Tp = gatb::core::tools::math::LargeInt<3>; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __lower_bound(_ForwardIterator __first, _ForwardIterator __last, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _ForwardIterator = std::_Deque_iterator > >, gatb::core::debruijn::impl::NodeNt > >&, gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 __uninitialized_copy_a(_InputIterator __first, _InputIterator __last, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:287:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_algobase.h: In member function ‘int gatb::core::debruijn::impl::BranchingTerminatorTemplate::AssocSet::get(const Key&, Value&) const [with Key = gatb::core::tools::math::LargeInt<3>; Value = short unsigned int; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Edge&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algobase.h: In member function ‘void gatb::core::debruijn::impl::BranchingTerminatorTemplate::mark(Node&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_algobase.h:993:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 return std::__lower_bound(__first, __last, __val, ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ __gnu_cxx::__ops::__iter_less_val()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<>::Count}; _Tp = gatb::core::kmer::impl::Kmer<>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<64>::Count}; _Tp = gatb::core::kmer::impl::Kmer<64>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 copy(_Deque_iterator<_Tp, const _Tp&, const _Tp*> __first, ^~~~ /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gatb::core::kmer::impl::Kmer<128>::Count}; _Tp = gatb::core::kmer::impl::Kmer<128>::Count; _Alloc = std::allocator::Count>]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::Count, std::allocator::Count> >::iterator’ {aka ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<1> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<1> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<1> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<1> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<1> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<1> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<>::Count; Type = gatb::core::tools::math::LargeInt<1>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<2> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc: In function ‘std::_Deque_iterator<_Tp, _Tp&, _Tp*> std::copy(std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, const _Tp&, const _Tp*>, std::_Deque_iterator<_Tp, _Tp&, _Tp*>) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:986:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<2> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<2> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<2> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<2> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<2> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<64>::Count; Type = gatb::core::tools::math::LargeInt<2>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair::Count, gatb::core::tools::math::LargeInt<4> >*>; _KeyOfValue = std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >; _Compare = std::less; _Alloc = std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_map.h: In member function ‘T& gatb::core::system::impl::ThreadObject::operator()() [with T = gatb::core::debruijn::impl::FunctorData::Count, gatb::core::tools::math::LargeInt<4> >]’: /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type ‘std::_Rb_tree::Count, gatb::core::tools::math::LargeInt<4> >*>, std::_Select1st::Count, gatb::core::tools::math::LargeInt<4> >*> >, std::less, std::allocator::Count, gatb::core::tools::math::LargeInt<4> >*> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator::Count, gatb::core::tools::math::LargeInt<4> >*> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/api/types.hpp:44, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/api/ICommand.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::FunctorNodes::operator()(Node&) [with Count = gatb::core::kmer::impl::Kmer<128>::Count; Type = gatb::core::tools::math::LargeInt<4>; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/impl/Algorithm.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<64>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘void gatb::core::debruijn::impl::SortCmd::execute() [with Count = gatb::core::kmer::impl::Kmer<128>::Count]’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Count*, std::vector::Count, std::allocator::Count> > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >&}; _Tp = gatb::core::tools::math::IntegerTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::tools::math::LargeInt<3>&}; _Tp = gatb::core::tools::math::LargeInt<3>; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In constructor ‘gatb::core::debruijn::impl::BranchingTerminatorTemplate::BranchingTerminatorTemplate(const Graph&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Key = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::Path_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 _Rb_tree<_Key, _Val, _KoV, _Cmp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_insert_unique(_II, _II) [with _InputIterator = std::_Rb_tree_const_iterator > > >; _Key = gatb::core::debruijn::impl::Path_t > >; _Val = gatb::core::debruijn::impl::Path_t > >; _KeyOfValue = std::_Identity > > >; _Compare = std::less > > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h:2463:7: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; Graph = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>; _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&, const gatb::core::debruijn::impl::NodeNt, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘void std::deque<_Tp, _Alloc>::_M_insert_aux(std::deque<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::deque<_Tp, _Alloc>::size_type) [with _ForwardIterator = std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>; _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 deque<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:758:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos - difference_type(__n)); ^~~ /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:781:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 return std::__uninitialized_copy_a(__first2, __last2, __mid, __alloc); ^ /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:421:72: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__mid, __last, __old_start); ^~~ /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:792:7: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __last, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:821:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:63, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _ForwardIterator __mid = std::__uninitialized_copy_a(__first1, __last1, ^~~~~ /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_uninitialized.h:388:24: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/deque:66, from /usr/include/boost/detail/container_fwd.hpp:91, from /usr/include/boost/container_hash/extensions.hpp:22, from /usr/include/boost/container_hash/hash.hpp:760, from /usr/include/boost/type_index/stl_type_index.hpp:43, from /usr/include/boost/type_index.hpp:29, from /usr/include/boost/variant/variant.hpp:21, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__first, __mid, __pos); ^~~ /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:832:5: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc: In member function ‘std::deque<_Tp, _Alloc>& std::deque<_Tp, _Alloc>::operator=(const std::deque<_Tp, _Alloc>&) [with _Tp = gatb::core::debruijn::impl::NodeNt > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 _M_erase_at_end(std::copy(__x.begin(), __x.end(), ^~~~~~~~~~~~~~~ /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:117:6: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::copy(__x.begin(), __mid, this->_M_impl._M_start); ^~~ /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:122:8: note: parameter passing for argument of type ‘std::deque > >, std::allocator > > > >::const_iterator’ {aka ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’} changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, __new_start, ^~~ /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:596:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 std::__uninitialized_copy_a(__first, __last, ^~~ /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 /usr/include/c++/8/bits/deque.tcc:612:3: note: parameter passing for argument of type ‘std::_Deque_iterator > >, const gatb::core::debruijn::impl::NodeNt > >&, const gatb::core::debruijn::impl::NodeNt > >*>’ changed in GCC 7.1 In file included from /usr/include/c++/8/set:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /usr/include/c++/8/bits/stl_set.h: In member function ‘std::set > gatb::core::debruijn::impl::MonumentTraversalTemplate::all_consensuses_between(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set, gatb::core::debruijn::impl::Path_t, bool&) [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; Graph = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >]’: /usr/include/c++/8/bits/stl_set.h:567:4: note: parameter passing for argument of type ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’ changed in GCC 7.1 { _M_t._M_insert_unique(__first, __last); } ^~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ [ 82%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ [ 82%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<128>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<128>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<96>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<96>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<64>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<64>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:34, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:509, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:666, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp: In instantiation of ‘gatb::core::tools::storage::impl::HDF5IteratorPatch::HDF5IteratorPatch(gatb::core::tools::storage::impl::IterableHDF5Patch*, size_t) [with Item = gatb::core::kmer::impl::Kmer<>::Count; size_t = unsigned int]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:48: required from ‘gatb::core::tools::dp::Iterator* gatb::core::tools::storage::impl::IterableHDF5Patch::iterator() [with Item = gatb::core::kmer::impl::Kmer<>::Count]’ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:335:25: required from here /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5Patch.hpp:436:16: warning: ‘void* memset(void*, int, size_t)’ clearing an object of type ‘struct gatb::core::kmer::impl::Kmer<>::Count’ with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] memset (_data, 0, _blockSize*sizeof(Item)); ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:1568:12: note: ‘struct gatb::core::kmer::impl::Kmer<>::Count’ declared here struct Count : tools::misc::Abundance ^~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<128>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<128>::KmerCanonical; unsigned int span = 128]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 128; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<128>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<128>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Distance = int; _Tp = std::pair > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<64>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<64>::KmerCanonical; unsigned int span = 64]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 64; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<64>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<64>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t > >; _Alloc = std::allocator > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > >, std::allocator > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, json::JSON>; _KeyOfValue = std::_Select1st, json::JSON> >; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/system/impl/System.hpp:39, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = json::JSON; _Compare = std::less >; _Alloc = std::allocator, json::JSON> >]’: /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, json::JSON>, std::_Select1st, json::JSON> >, std::less >, std::allocator, json::JSON> > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, json::JSON> >’} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >&}; _Tp = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair > > >}; _Tp = std::pair > > >; _Alloc = std::allocator > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector > > >, std::allocator > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/set:60, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:31, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _Val = gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; _KeyOfValue = std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >]’: /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, gatb::core::debruijn::impl::BranchingNode_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::_Identity, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:37, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘typename Functor::Result gatb::core::kmer::impl::Kmer::ModelAbstract::execute(gatb::core::tools::misc::Data::Encoding_e, Functor) const [with Functor = gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed; ModelImpl = gatb::core::kmer::impl::Kmer<96>::ModelCanonical; T = gatb::core::kmer::impl::Kmer<96>::KmerCanonical; unsigned int span = 96]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:664:34: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 typename Functor::Result execute (tools::misc::Data::Encoding_e encoding, Functor action) const ^~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::buildNode_visitor::operator()(const gatb::core::debruijn::impl::GraphData&) const [with unsigned int span = 96; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const char*) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp: In member function ‘Node gatb::core::debruijn::impl::GraphTemplate::buildNode(const gatb::core::tools::misc::Data&, size_t) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 return execute (encoding, Functor_codeSeed(seq, startIndex)); ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/Model.hpp:480:46: note: parameter passing for argument of type ‘gatb::core::kmer::impl::Kmer<96>::ModelAbstract::ModelCanonical, gatb::core::kmer::impl::Kmer<96>::KmerCanonical>::Functor_codeSeed’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<1>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<2>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<3>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = gatb::core::tools::math::LargeInt<4>; _Value = std::pair, std::pair > >; _Alloc = std::allocator, std::pair > > >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to >; _H1 = gatb::core::debruijn::impl::NodeHasher >; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits]’: /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ _H1, _H2, _Hash, _RehashPolicy, _Traits>:: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/hashtable.h:1871:5: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >*, std::vector > >, std::allocator > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >; GraphDataVariant = boost::variant >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set > >, std::less > > >, std::allocator > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate >, gatb::core::debruijn::impl::Edge_t > >, boost::variant > >; Node = gatb::core::debruijn::impl::Node_t >; Edge = gatb::core::debruijn::impl::Edge_t > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const::Cmd::execute() [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:2: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In member function ‘std::set > gatb::core::debruijn::impl::GraphTemplate::neighbors(typename std::set >::iterator, typename std::set >::iterator) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 std::set > GraphTemplate::neighbors (typename std::set >::iterator first, typename std::set >::iterator last) const ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.cpp:2935:34: note: parameter passing for argument of type ‘std::set, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, std::less, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >::iterator’ {aka ‘std::_Rb_tree_const_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/unordered_map:46, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /usr/include/c++/8/bits/hashtable.h: In member function ‘void gatb::core::debruijn::impl::GraphTemplate::cacheNonSimpleNodeDelete(const Node&) const [with Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >; GraphDataVariant = boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > >]’: /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ /usr/include/c++/8/bits/hashtable.h:767:42: note: parameter passing for argument of type ‘std::_Hashtable, std::pair, std::pair > >, std::allocator, std::pair > > >, std::__detail::_Select1st, std::equal_to >, gatb::core::debruijn::impl::NodeHasher >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::const_iterator’ {aka ‘std::__detail::_Node_const_iterator, std::pair > >, false, true>’} changed in GCC 7.1 { return erase(const_iterator(__it)); } ^ [ 82%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp [ 83%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ [ 83%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 128]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 32]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<128>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<32>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 [ 84%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 64]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 84%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 84%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 85%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 85%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/usr/include/hdf5/serial -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src -I/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -DNDEBUG -Wall -Wno-unused-function -Wno-unknown-pragmas -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/include/None/BooPHF/BooPHF.h:545:11: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wformat=] printf("rank array : size %lu \n",_ranks.size()); ^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<64>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gatb::core::debruijn::impl::NodeGU&}; _Tp = gatb::core::debruijn::impl::NodeGU; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void gatb::core::debruijn::impl::GraphUnitigsTemplate::simplePathLongest_avance(const gatb::core::debruijn::impl::NodeGU&, gatb::core::debruijn::impl::Direction, int&, int&, bool, float&, std::__cxx11::string*, std::vector*) [with unsigned int span = 96]’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >}; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Alloc = std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’} changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphUnitigsTemplate<96>; Node = gatb::core::debruijn::impl::NodeGU; Edge = gatb::core::debruijn::impl::EdgeGU]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Distance = int; _Tp = std::pair, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~~~~~~ /usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__pop_heap(__first, __last, __last, __comp); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__make_heap(__first, __middle, __comp); ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/vector.tcc: In member function ‘void gatb::core::debruijn::impl::Simplifications::heuristic_most_covered_path_unitigs(gatb::core::debruijn::impl::Direction, Node&, Node&, int, std::set&, int&, std::vector&, std::vector&, double&, unsigned int, Node*, bool, long unsigned int&) [with GraphType = gatb::core::debruijn::impl::GraphTemplate, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >, gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >, boost::variant, gatb::core::debruijn::impl::GraphData<32>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<64>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<96>, boost::mpl::l_item, gatb::core::debruijn::impl::GraphData<128>, boost::mpl::l_end> > > > > > >; Node = gatb::core::debruijn::impl::Node_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > >; Edge = gatb::core::debruijn::impl::Edge_t, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > >]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /usr/include/boost/move/algorithm.hpp:32, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/variant/detail/move.hpp:28, from /usr/include/boost/variant/detail/initializer.hpp:23, from /usr/include/boost/variant/variant.hpp:30, from /usr/include/boost/variant.hpp:17, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/tools/designpattern/impl/IteratorHelpers.hpp:32, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/Sequence.hpp:183, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Graph.hpp:36, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >*, std::vector, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > >, std::allocator, mpl_::int_<64>, mpl_::int_<96>, mpl_::int_<128> > > > > > > > >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 86%] Linking CXX static library ../lib/None/libgatbcore.a cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -P CMakeFiles/gatbcore-static.dir/cmake_clean_target.cmake cd /<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatbcore-static.dir/link.txt --verbose=1 /usr/bin/ar qc ../lib/None/libgatbcore.a CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/api/Data.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o /usr/bin/ranlib ../lib/None/libgatbcore.a make[4]: Leaving directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' [ 86%] Built target gatbcore-static make[3]: Leaving directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' make[2]: *** [Makefile:155: all] Error 2 make[2]: Leaving directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg/obj-arm-linux-gnueabihf' dh_auto_build: cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" returned exit code 2 make[1]: *** [debian/rules:13: override_dh_auto_build-arch] Error 2 make[1]: Leaving directory '/<>/gatb-core-1.4.1+git20181225.44d5a44+dfsg' make: *** [debian/rules:10: build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 20190421-1149 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build-Space: 1289956 Build-Time: 1622 Distribution: eoan Fail-Stage: build Host Architecture: armhf Install-Time: 44 Job: gatb-core_1.4.1+git20181225.44d5a44+dfsg-1.dsc Machine Architecture: arm64 Package: gatb-core Package-Time: 1668 Source-Version: 1.4.1+git20181225.44d5a44+dfsg-1 Space: 1289956 Status: attempted Version: 1.4.1+git20181225.44d5a44+dfsg-1 -------------------------------------------------------------------------------- Finished at 20190421-1149 Build needed 00:27:48, 1289956k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=eoan --arch=armhf PACKAGEBUILD-16663214 Scanning for processes to kill in build PACKAGEBUILD-16663214