https://launchpad.net/ubuntu/+source/gff2aplot/2.0-14/+build/22295148 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-ppc64el-016 4.15.0-159-generic #167-Ubuntu SMP Mon Sep 20 23:05:55 UTC 2021 ppc64le Buildd toolchain package versions: launchpad-buildd_203~505~ubuntu18.04.1 python3-lpbuildd_203~505~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.9 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 21 Oct 03:51:21 ntpdate[1977]: adjust time server 10.211.37.1 offset 0.002261 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=jammy --arch=ppc64el PACKAGEBUILD-22295148 --image-type chroot /home/buildd/filecache-default/ae829e8dfbc5e66178717d1638ae19da3b16614e Creating target for build PACKAGEBUILD-22295148 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=jammy --arch=ppc64el PACKAGEBUILD-22295148 Starting target for build PACKAGEBUILD-22295148 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=jammy --arch=ppc64el PACKAGEBUILD-22295148 'deb http://ftpmaster.internal/ubuntu jammy main universe' 'deb http://ftpmaster.internal/ubuntu jammy-security main universe' 'deb http://ftpmaster.internal/ubuntu jammy-updates main universe' 'deb http://ftpmaster.internal/ubuntu jammy-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-22295148 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=jammy --arch=ppc64el PACKAGEBUILD-22295148 Updating target for build PACKAGEBUILD-22295148 Get:1 http://ftpmaster.internal/ubuntu jammy InRelease [224 kB] Get:2 http://ftpmaster.internal/ubuntu jammy-security InRelease [74.9 kB] Get:3 http://ftpmaster.internal/ubuntu jammy-updates InRelease [74.9 kB] Get:4 http://ftpmaster.internal/ubuntu jammy-proposed InRelease [74.9 kB] Get:5 http://ftpmaster.internal/ubuntu jammy/main ppc64el Packages [1356 kB] Get:6 http://ftpmaster.internal/ubuntu jammy/main Translation-en [512 kB] Get:7 http://ftpmaster.internal/ubuntu jammy/universe ppc64el Packages [12.9 MB] Get:8 http://ftpmaster.internal/ubuntu jammy/universe Translation-en [5500 kB] Get:9 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el Packages [248 kB] Get:10 http://ftpmaster.internal/ubuntu jammy-proposed/main Translation-en [97.7 kB] Get:11 http://ftpmaster.internal/ubuntu jammy-proposed/universe ppc64el Packages [1091 kB] Get:12 http://ftpmaster.internal/ubuntu jammy-proposed/universe Translation-en [1012 kB] Fetched 23.2 MB in 5s (4581 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt base-files base-passwd bsdutils bzip2 ca-certificates coreutils debianutils fakeroot gzip libapparmor1 libapt-pkg6.0 libargon2-1 libattr1 libaudit-common libaudit1 libblkid1 libbz2-1.0 libcap-ng0 libcap2 libcrypt-dev libcrypt1 libdb5.3 libdebconfclient0 libfakeroot libgdbm-compat4 libgdbm6 libgmp10 libgpg-error0 libgssapi-krb5-2 libhogweed6 libidn2-0 libip4tc2 libisl23 libjson-c5 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblz4-1 liblzma5 libmount1 libmpc3 libmpfr6 libncurses6 libncursesw6 libnettle8 libnpth0 libp11-kit0 libpcre3 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libtasn1-6 libtinfo6 libuuid1 libzstd1 lockfile-progs make mawk mount ncurses-base ncurses-bin optipng patch pinentry-curses readline-common sed sensible-utils sysvinit-utils tar util-linux xz-utils 77 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 15.0 MB of archives. After this operation, 487 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu jammy/main ppc64el libcrypt-dev ppc64el 1:4.4.18-4ubuntu2 [145 kB] Get:2 http://ftpmaster.internal/ubuntu jammy/main ppc64el libcrypt1 ppc64el 1:4.4.18-4ubuntu2 [111 kB] Get:3 http://ftpmaster.internal/ubuntu jammy/main ppc64el base-files ppc64el 12ubuntu1 [63.4 kB] Get:4 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el bsdutils ppc64el 1:2.36.1-8ubuntu2 [86.1 kB] Get:5 http://ftpmaster.internal/ubuntu jammy/main ppc64el coreutils ppc64el 8.32-4ubuntu3 [1587 kB] Get:6 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el debianutils ppc64el 5.5-1 [78.2 kB] Get:7 http://ftpmaster.internal/ubuntu jammy/main ppc64el gzip ppc64el 1.10-4ubuntu2 [112 kB] Get:8 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libncurses6 ppc64el 6.2+20210905-1 [144 kB] Get:9 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libncursesw6 ppc64el 6.2+20210905-1 [183 kB] Get:10 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libtinfo6 ppc64el 6.2+20210905-1 [129 kB] Get:11 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el ncurses-bin ppc64el 6.2+20210905-1 [193 kB] Get:12 http://ftpmaster.internal/ubuntu jammy/main ppc64el sed ppc64el 4.7-1ubuntu2 [204 kB] Get:13 http://ftpmaster.internal/ubuntu jammy/main ppc64el tar ppc64el 1.34+dfsg-1build2 [364 kB] Get:14 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el util-linux ppc64el 2.36.1-8ubuntu2 [1080 kB] Get:15 http://ftpmaster.internal/ubuntu jammy/main ppc64el libdebconfclient0 ppc64el 0.256ubuntu4 [6250 B] Get:16 http://ftpmaster.internal/ubuntu jammy/main ppc64el base-passwd ppc64el 3.5.52 [50.8 kB] Get:17 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el ncurses-base all 6.2+20210905-1 [19.9 kB] Get:18 http://ftpmaster.internal/ubuntu jammy/main ppc64el sysvinit-utils ppc64el 2.96-7ubuntu2 [22.4 kB] Get:19 http://ftpmaster.internal/ubuntu jammy/main ppc64el bzip2 ppc64el 1.0.8-4ubuntu4 [37.4 kB] Get:20 http://ftpmaster.internal/ubuntu jammy/main ppc64el libbz2-1.0 ppc64el 1.0.8-4ubuntu4 [49.1 kB] Get:21 http://ftpmaster.internal/ubuntu jammy/main ppc64el liblz4-1 ppc64el 1.9.3-2build1 [75.9 kB] Get:22 http://ftpmaster.internal/ubuntu jammy/main ppc64el liblzma5 ppc64el 5.2.5-2build1 [125 kB] Get:23 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libzstd1 ppc64el 1.4.8+dfsg-3 [364 kB] Get:24 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libapt-pkg6.0 ppc64el 2.3.10 [1029 kB] Get:25 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libseccomp2 ppc64el 2.5.1-1ubuntu2 [59.8 kB] Get:26 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el apt ppc64el 2.3.10 [1436 kB] Get:27 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el mount ppc64el 2.36.1-8ubuntu2 [117 kB] Get:28 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libattr1 ppc64el 1:2.5.1-1 [14.3 kB] Get:29 http://ftpmaster.internal/ubuntu jammy/main ppc64el libaudit-common all 1:3.0-2ubuntu3 [4688 B] Get:30 http://ftpmaster.internal/ubuntu jammy/main ppc64el libcap-ng0 ppc64el 0.7.9-2.2build2 [12.4 kB] Get:31 http://ftpmaster.internal/ubuntu jammy/main ppc64el libaudit1 ppc64el 1:3.0-2ubuntu3 [50.3 kB] Get:32 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libblkid1 ppc64el 2.36.1-8ubuntu2 [123 kB] Get:33 http://ftpmaster.internal/ubuntu jammy/main ppc64el libcap2 ppc64el 1:2.44-1build2 [21.0 kB] Get:34 http://ftpmaster.internal/ubuntu jammy/main ppc64el libdb5.3 ppc64el 5.3.28+dfsg1-0.8ubuntu2 [840 kB] Get:35 http://ftpmaster.internal/ubuntu jammy/main ppc64el libgmp10 ppc64el 2:6.2.1+dfsg-1ubuntu3 [276 kB] Get:36 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libgpg-error0 ppc64el 1.42-3 [84.4 kB] Get:37 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libk5crypto3 ppc64el 1.18.3-7 [117 kB] Get:38 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libkrb5support0 ppc64el 1.18.3-7 [37.6 kB] Get:39 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libkrb5-3 ppc64el 1.18.3-7 [436 kB] Get:40 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libgssapi-krb5-2 ppc64el 1.18.3-7 [183 kB] Get:41 http://ftpmaster.internal/ubuntu jammy/main ppc64el libkeyutils1 ppc64el 1.6.1-2ubuntu2 [11.6 kB] Get:42 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libselinux1 ppc64el 3.1-3build3 [93.8 kB] Get:43 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libmount1 ppc64el 2.36.1-8ubuntu2 [140 kB] Get:44 http://ftpmaster.internal/ubuntu jammy/main ppc64el libpcre3 ppc64el 2:8.39-13build4 [274 kB] Get:45 http://ftpmaster.internal/ubuntu jammy/main ppc64el libsemanage-common all 3.1-1ubuntu3 [9606 B] Get:46 http://ftpmaster.internal/ubuntu jammy/main ppc64el libsemanage1 ppc64el 3.1-1ubuntu3 [112 kB] Get:47 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libsmartcols1 ppc64el 2.36.1-8ubuntu2 [59.5 kB] Get:48 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libuuid1 ppc64el 2.36.1-8ubuntu2 [26.5 kB] Get:49 http://ftpmaster.internal/ubuntu jammy/main ppc64el libnettle8 ppc64el 3.7.3-1build1 [202 kB] Get:50 http://ftpmaster.internal/ubuntu jammy/main ppc64el libhogweed6 ppc64el 3.7.3-1build1 [206 kB] Get:51 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libidn2-0 ppc64el 2.3.2-2 [70.4 kB] Get:52 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libp11-kit0 ppc64el 0.24.0-5 [264 kB] Get:53 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libtasn1-6 ppc64el 4.17.0-2 [56.1 kB] Get:54 http://ftpmaster.internal/ubuntu jammy/main ppc64el mawk ppc64el 1.3.4.20200120-2build1 [115 kB] Get:55 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el sensible-utils all 0.0.17 [20.1 kB] Get:56 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el ca-certificates all 20211016 [148 kB] Get:57 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libapparmor1 ppc64el 3.0.3-0ubuntu2 [43.8 kB] Get:58 http://ftpmaster.internal/ubuntu jammy/main ppc64el libargon2-1 ppc64el 0~20171227-0.2build22 [21.9 kB] Get:59 http://ftpmaster.internal/ubuntu jammy/main ppc64el libip4tc2 ppc64el 1.8.7-1ubuntu3 [23.9 kB] Get:60 http://ftpmaster.internal/ubuntu jammy/main ppc64el libjson-c5 ppc64el 0.15-2build3 [39.1 kB] Get:61 http://ftpmaster.internal/ubuntu jammy/main ppc64el readline-common all 8.1-2build1 [53.6 kB] Get:62 http://ftpmaster.internal/ubuntu jammy/main ppc64el libreadline8 ppc64el 8.1-2build1 [177 kB] Get:63 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libsqlite3-0 ppc64el 3.36.0-2 [744 kB] Get:64 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libgdbm6 ppc64el 1.22-1 [43.1 kB] Get:65 http://ftpmaster.internal/ubuntu jammy/main ppc64el xz-utils ppc64el 5.2.5-2build1 [91.7 kB] Get:66 http://ftpmaster.internal/ubuntu jammy/main ppc64el libfakeroot ppc64el 1.25.3-1.1ubuntu3 [33.7 kB] Get:67 http://ftpmaster.internal/ubuntu jammy/main ppc64el fakeroot ppc64el 1.25.3-1.1ubuntu3 [62.8 kB] Get:68 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libgdbm-compat4 ppc64el 1.22-1 [6864 B] Get:69 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libisl23 ppc64el 0.24-2 [835 kB] Get:70 http://ftpmaster.internal/ubuntu jammy/main ppc64el libmpfr6 ppc64el 4.1.0-3build2 [355 kB] Get:71 http://ftpmaster.internal/ubuntu jammy/main ppc64el libnpth0 ppc64el 1.6-3build1 [9072 B] Get:72 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el lockfile-progs ppc64el 0.1.19 [10.2 kB] Get:73 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el make ppc64el 4.3-4ubuntu2 [211 kB] Get:74 http://ftpmaster.internal/ubuntu jammy/main ppc64el optipng ppc64el 0.7.7-2 [90.6 kB] Get:75 http://ftpmaster.internal/ubuntu jammy/main ppc64el patch ppc64el 2.7.6-7build1 [128 kB] Get:76 http://ftpmaster.internal/ubuntu jammy/main ppc64el pinentry-curses ppc64el 1.1.1-1build1 [38.0 kB] Get:77 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libmpc3 ppc64el 1.2.1-1 [52.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 15.0 MB in 1s (24.7 MB/s) (Reading database ... 13185 files and directories currently installed.) 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Setting up bzip2 (1.0.8-4ubuntu4) ... Setting up libfakeroot:ppc64el (1.25.3-1.1ubuntu3) ... Setting up fakeroot (1.25.3-1.1ubuntu3) ... Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... rehash: warning: skipping ca-certificates.crt,it does not contain exactly one certificate or CRL 7 added, 8 removed; done. Setting up make (4.3-4ubuntu2) ... Setting up libmpfr6:ppc64el (4.1.0-3build2) ... Setting up optipng (0.7.7-2) ... Setting up libncurses6:ppc64el (6.2+20210905-1) ... Setting up xz-utils (5.2.5-2build1) ... Setting up libmpc3:ppc64el (1.2.1-1) ... Setting up lockfile-progs (0.1.19) ... Setting up patch (2.7.6-7build1) ... Setting up libncursesw6:ppc64el (6.2+20210905-1) ... Setting up mount (2.36.1-8ubuntu2) ... Setting up sensible-utils (0.0.17) ... Setting up libcrypt-dev:ppc64el (1:4.4.18-4ubuntu2) ... Setting up mawk (1.3.4.20200120-2build1) ... Setting up libisl23:ppc64el (0.24-2) ... Setting up libjson-c5:ppc64el (0.15-2build3) ... Setting up readline-common (8.1-2build1) ... Setting up libgdbm6:ppc64el (1.22-1) ... Setting up pinentry-curses (1.1.1-1build1) ... Setting up libreadline8:ppc64el (8.1-2build1) ... Setting up libgdbm-compat4:ppc64el (1.22-1) ... Processing triggers for libc-bin (2.34-0ubuntu3) ... Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-22295148 ppc64el jammy-proposed -c chroot:build-PACKAGEBUILD-22295148 --arch=ppc64el --dist=jammy-proposed --nolog gff2aplot_2.0-14.dsc Initiating build PACKAGEBUILD-22295148 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-159-generic #167-Ubuntu SMP Mon Sep 20 23:05:55 UTC 2021 ppc64le sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-ppc64el-016.buildd +==============================================================================+ | gff2aplot 2.0-14 (ppc64el) Thu, 21 Oct 2021 03:51:52 +0000 | +==============================================================================+ Package: gff2aplot Version: 2.0-14 Source Version: 2.0-14 Distribution: jammy-proposed Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-22295148/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- gff2aplot_2.0-14.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/gff2aplot-gyw3dC/gff2aplot-2.0' with '<>' I: NOTICE: Log filtering will replace 'build/gff2aplot-gyw3dC' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-KzDRQ0/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-KzDRQ0/apt_archive ./ InRelease Get:2 copy:/<>/resolver-KzDRQ0/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-KzDRQ0/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-KzDRQ0/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-KzDRQ0/apt_archive ./ Packages [435 B] Fetched 1741 B in 0s (63.6 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 654 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-KzDRQ0/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [654 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 654 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 13187 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13) Filtered Build-Depends: debhelper-compat (= 13) dpkg-deb: building package 'sbuild-build-depends-gff2aplot-dummy' in '/<>/resolver-KzDRQ0/apt_archive/sbuild-build-depends-gff2aplot-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-gff2aplot-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-KzDRQ0/apt_archive ./ InRelease Get:2 copy:/<>/resolver-KzDRQ0/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-KzDRQ0/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-KzDRQ0/apt_archive ./ Sources [493 B] Get:5 copy:/<>/resolver-KzDRQ0/apt_archive ./ Packages [576 B] Fetched 2032 B in 0s (129 kB/s) Reading package lists... Reading package lists... Install gff2aplot build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libdw1 libelf1 libfile-stripnondeterminism-perl libicu67 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libdw1 libelf1 libfile-stripnondeterminism-perl libicu67 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf sbuild-build-depends-gff2aplot-dummy 0 upgraded, 33 newly installed, 0 to remove and 0 not upgraded. Need to get 18.7 MB of archives. After this operation, 69.9 MB of additional disk space will be used. Get:1 copy:/<>/resolver-KzDRQ0/apt_archive ./ sbuild-build-depends-gff2aplot-dummy 0.invalid.0 [662 B] Get:2 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el bsdextrautils ppc64el 2.36.1-8ubuntu2 [81.1 kB] Get:3 http://ftpmaster.internal/ubuntu jammy/main ppc64el libuchardet0 ppc64el 0.0.7-1build1 [80.3 kB] Get:4 http://ftpmaster.internal/ubuntu jammy/main ppc64el groff-base ppc64el 1.22.4-7 [1033 kB] Get:5 http://ftpmaster.internal/ubuntu jammy/main ppc64el libpipeline1 ppc64el 1.5.3-1build1 [27.0 kB] Get:6 http://ftpmaster.internal/ubuntu jammy/main ppc64el man-db ppc64el 2.9.4-2build1 [1231 kB] Get:7 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libelf1 ppc64el 0.185-2 [62.6 kB] Get:8 http://ftpmaster.internal/ubuntu jammy/main ppc64el libicu67 ppc64el 67.1-7ubuntu1 [10.4 MB] Get:9 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libxml2 ppc64el 2.9.12+dfsg-5 [838 kB] Get:10 http://ftpmaster.internal/ubuntu jammy/main ppc64el libmagic-mgc ppc64el 1:5.39-3build1 [236 kB] Get:11 http://ftpmaster.internal/ubuntu jammy/main ppc64el libmagic1 ppc64el 1:5.39-3build1 [105 kB] Get:12 http://ftpmaster.internal/ubuntu jammy/main ppc64el file ppc64el 1:5.39-3build1 [25.6 kB] Get:13 http://ftpmaster.internal/ubuntu jammy/main ppc64el gettext-base ppc64el 0.21-4ubuntu3 [40.5 kB] Get:14 http://ftpmaster.internal/ubuntu jammy/main ppc64el libsigsegv2 ppc64el 2.13-1ubuntu2 [15.3 kB] Get:15 http://ftpmaster.internal/ubuntu jammy/main ppc64el m4 ppc64el 1.4.18-5ubuntu1 [213 kB] Get:16 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el autoconf all 2.71-2 [338 kB] Get:17 http://ftpmaster.internal/ubuntu jammy/main ppc64el autotools-dev all 20180224.1+nmu1 [39.4 kB] Get:18 http://ftpmaster.internal/ubuntu jammy/main ppc64el automake all 1:1.16.4-2 [557 kB] Get:19 http://ftpmaster.internal/ubuntu jammy/main ppc64el autopoint all 0.21-4ubuntu3 [422 kB] Get:20 http://ftpmaster.internal/ubuntu jammy/main ppc64el libdebhelper-perl all 13.3.4ubuntu2 [62.5 kB] Get:21 http://ftpmaster.internal/ubuntu jammy/main ppc64el libtool all 2.4.6-15build1 [164 kB] Get:22 http://ftpmaster.internal/ubuntu jammy/main ppc64el dh-autoreconf all 20 [16.1 kB] Get:23 http://ftpmaster.internal/ubuntu jammy/main ppc64el libarchive-zip-perl all 1.68-1 [90.2 kB] Get:24 http://ftpmaster.internal/ubuntu jammy/main ppc64el libsub-override-perl all 0.09-2 [9532 B] Get:25 http://ftpmaster.internal/ubuntu jammy/main ppc64el libfile-stripnondeterminism-perl all 1.12.0-1 [17.5 kB] Get:26 http://ftpmaster.internal/ubuntu jammy/main ppc64el dh-strip-nondeterminism all 1.12.0-1 [5228 B] Get:27 http://ftpmaster.internal/ubuntu jammy-proposed/main ppc64el libdw1 ppc64el 0.185-2 [289 kB] Get:28 http://ftpmaster.internal/ubuntu jammy/main ppc64el debugedit ppc64el 1:5.0-0ubuntu2 [52.4 kB] Get:29 http://ftpmaster.internal/ubuntu jammy/main ppc64el dwz ppc64el 0.14-1build1 [125 kB] Get:30 http://ftpmaster.internal/ubuntu jammy/main ppc64el gettext ppc64el 0.21-4ubuntu3 [895 kB] Get:31 http://ftpmaster.internal/ubuntu jammy/main ppc64el intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:32 http://ftpmaster.internal/ubuntu jammy/main ppc64el po-debconf all 1.0.21+nmu1 [233 kB] Get:33 http://ftpmaster.internal/ubuntu jammy/main ppc64el debhelper all 13.3.4ubuntu2 [921 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.7 MB in 0s (41.8 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 13187 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8ubuntu2_ppc64el.deb ... Unpacking bsdextrautils (2.36.1-8ubuntu2) ... Selecting previously unselected package libuchardet0:ppc64el. Preparing to unpack .../01-libuchardet0_0.0.7-1build1_ppc64el.deb ... Unpacking libuchardet0:ppc64el (0.0.7-1build1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-7_ppc64el.deb ... Unpacking groff-base (1.22.4-7) ... Selecting previously unselected package libpipeline1:ppc64el. Preparing to unpack .../03-libpipeline1_1.5.3-1build1_ppc64el.deb ... Unpacking libpipeline1:ppc64el (1.5.3-1build1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2build1_ppc64el.deb ... Unpacking man-db (2.9.4-2build1) ... Selecting previously unselected package libelf1:ppc64el. Preparing to unpack .../05-libelf1_0.185-2_ppc64el.deb ... 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Setting up libmagic1:ppc64el (1:5.39-3build1) ... Setting up gettext-base (0.21-4ubuntu3) ... Setting up file (1:5.39-3build1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libsigsegv2:ppc64el (2.13-1ubuntu2) ... Setting up autopoint (0.21-4ubuntu3) ... Setting up libuchardet0:ppc64el (0.0.7-1build1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libelf1:ppc64el (0.185-2) ... Setting up libxml2:ppc64el (2.9.12+dfsg-5) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libdw1:ppc64el (0.185-2) ... Setting up gettext (0.21-4ubuntu3) ... Setting up libtool (2.4.6-15build1) ... Setting up m4 (1.4.18-5ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up autoconf (2.71-2) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.14-1build1) ... Setting up groff-base (1.22.4-7) ... Setting up debugedit (1:5.0-0ubuntu2) ... Setting up automake (1:1.16.4-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2build1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up dh-autoreconf (20) ... Setting up debhelper (13.3.4ubuntu2) ... Setting up sbuild-build-depends-gff2aplot-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.34-0ubuntu3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-159-generic ppc64el (ppc64le) Toolchain package versions: binutils_2.37-7ubuntu1 dpkg-dev_1.20.9ubuntu2 g++-11_11.2.0-7ubuntu2 gcc-11_11.2.0-7ubuntu2 libc6-dev_2.34-0ubuntu3 libstdc++-11-dev_11.2.0-7ubuntu2 libstdc++6_11.2.0-7ubuntu2 linux-libc-dev_5.13.0-19.19 Package versions: adduser_3.118ubuntu5 advancecomp_2.1-2.1ubuntu1 apt_2.3.10 autoconf_2.71-2 automake_1:1.16.4-2 autopoint_0.21-4ubuntu3 autotools-dev_20180224.1+nmu1 base-files_12ubuntu1 base-passwd_3.5.52 bash_5.1-3ubuntu2 binutils_2.37-7ubuntu1 binutils-common_2.37-7ubuntu1 binutils-powerpc64le-linux-gnu_2.37-7ubuntu1 bsdextrautils_2.36.1-8ubuntu2 bsdutils_1:2.36.1-8ubuntu2 build-essential_12.9ubuntu2 bzip2_1.0.8-4ubuntu4 ca-certificates_20211016 coreutils_8.32-4ubuntu3 cpp_4:11.2.0-1ubuntu1 cpp-11_11.2.0-7ubuntu2 dash_0.5.11+git20210120+802ebd4-1build1 debconf_1.5.77 debhelper_13.3.4ubuntu2 debianutils_5.5-1 debugedit_1:5.0-0ubuntu2 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.8-0ubuntu1 dpkg_1.20.9ubuntu2 dpkg-dev_1.20.9ubuntu2 dwz_0.14-1build1 e2fsprogs_1.46.3-1ubuntu3 fakeroot_1.25.3-1.1ubuntu3 file_1:5.39-3build1 findutils_4.8.0-1ubuntu2 g++_4:11.2.0-1ubuntu1 g++-11_11.2.0-7ubuntu2 gcc_4:11.2.0-1ubuntu1 gcc-11_11.2.0-7ubuntu2 gcc-11-base_11.2.0-7ubuntu2 gettext_0.21-4ubuntu3 gettext-base_0.21-4ubuntu3 gpg_2.2.20-1ubuntu4 gpg-agent_2.2.20-1ubuntu4 gpgconf_2.2.20-1ubuntu4 gpgv_2.2.20-1ubuntu4 grep_3.7-0ubuntu1 groff-base_1.22.4-7 gzip_1.10-4ubuntu2 hostname_3.23ubuntu1 init_1.60build1 init-system-helpers_1.60build1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-10ubuntu2 libapparmor1_3.0.3-0ubuntu2 libapt-pkg6.0_2.3.10 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2build22 libasan6_11.2.0-7ubuntu2 libassuan0_2.5.5-1 libatomic1_11.2.0-7ubuntu2 libattr1_1:2.5.1-1 libaudit-common_1:3.0-2ubuntu3 libaudit1_1:3.0-2ubuntu3 libbinutils_2.37-7ubuntu1 libblkid1_2.36.1-8ubuntu2 libbz2-1.0_1.0.8-4ubuntu4 libc-bin_2.34-0ubuntu3 libc-dev-bin_2.34-0ubuntu3 libc6_2.34-0ubuntu3 libc6-dev_2.34-0ubuntu3 libcap-ng0_0.7.9-2.2build2 libcap2_1:2.44-1build2 libcc1-0_11.2.0-7ubuntu2 libcom-err2_1.46.3-1ubuntu3 libcrypt-dev_1:4.4.18-4ubuntu2 libcrypt1_1:4.4.18-4ubuntu2 libcryptsetup12_2:2.3.6-0ubuntu1 libctf-nobfd0_2.37-7ubuntu1 libctf0_2.37-7ubuntu1 libdb5.3_5.3.28+dfsg1-0.8ubuntu2 libdebconfclient0_0.256ubuntu4 libdebhelper-perl_13.3.4ubuntu2 libdevmapper1.02.1_2:1.02.175-2.1ubuntu3 libdpkg-perl_1.20.9ubuntu2 libdw1_0.185-2 libelf1_0.185-2 libext2fs2_1.46.3-1ubuntu3 libfakeroot_1.25.3-1.1ubuntu3 libffi8_3.4.2-1ubuntu5 libfile-stripnondeterminism-perl_1.12.0-1 libgcc-11-dev_11.2.0-7ubuntu2 libgcc-s1_11.2.0-7ubuntu2 libgcrypt20_1.8.7-5ubuntu2 libgdbm-compat4_1.22-1 libgdbm6_1.22-1 libgmp10_2:6.2.1+dfsg-1ubuntu3 libgnutls30_3.7.1-5ubuntu1 libgomp1_11.2.0-7ubuntu2 libgpg-error0_1.42-3 libgssapi-krb5-2_1.18.3-7 libhogweed6_3.7.3-1build1 libicu67_67.1-7ubuntu1 libidn2-0_2.3.2-2 libip4tc2_1.8.7-1ubuntu3 libisl23_0.24-2 libitm1_11.2.0-7ubuntu2 libjson-c5_0.15-2build3 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2ubuntu2 libkmod2_28-1ubuntu4 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 liblockfile-bin_1.17-1build1 liblockfile1_1.17-1build1 liblsan0_11.2.0-7ubuntu2 liblz4-1_1.9.3-2build1 liblzma5_5.2.5-2build1 libmagic-mgc_1:5.39-3build1 libmagic1_1:5.39-3build1 libmount1_2.36.1-8ubuntu2 libmpc3_1.2.1-1 libmpfr6_4.1.0-3build2 libncurses6_6.2+20210905-1 libncursesw6_6.2+20210905-1 libnettle8_3.7.3-1build1 libnpth0_1.6-3build1 libnsl-dev_1.3.0-2build1 libnsl2_1.3.0-2build1 libp11-kit0_0.24.0-5 libpam-modules_1.3.1-5ubuntu11 libpam-modules-bin_1.3.1-5ubuntu11 libpam-runtime_1.3.1-5ubuntu11 libpam0g_1.3.1-5ubuntu11 libpcre2-8-0_10.37-0ubuntu2 libpcre3_2:8.39-13build4 libperl5.32_5.32.1-3ubuntu3 libpipeline1_1.5.3-1build1 libpng16-16_1.6.37-3build4 libprocps8_2:3.3.17-5ubuntu3 libquadmath0_11.2.0-7ubuntu2 libreadline8_8.1-2build1 libseccomp2_2.5.1-1ubuntu2 libselinux1_3.1-3build3 libsemanage-common_3.1-1ubuntu3 libsemanage1_3.1-1ubuntu3 libsepol1_3.1-1ubuntu2 libsigsegv2_2.13-1ubuntu2 libsmartcols1_2.36.1-8ubuntu2 libsqlite3-0_3.36.0-2 libss2_1.46.3-1ubuntu3 libssl1.1_1.1.1l-1ubuntu1 libstdc++-11-dev_11.2.0-7ubuntu2 libstdc++6_11.2.0-7ubuntu2 libsub-override-perl_0.09-2 libsystemd0_248.3-1ubuntu8 libtasn1-6_4.17.0-2 libtinfo6_6.2+20210905-1 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15build1 libtsan0_11.2.0-7ubuntu2 libubsan1_11.2.0-7ubuntu2 libuchardet0_0.0.7-1build1 libudev1_248.3-1ubuntu8 libunistring2_0.9.10-6 libuuid1_2.36.1-8ubuntu2 libxml2_2.9.12+dfsg-5 libxxhash0_0.8.0-2build1 libzstd1_1.4.8+dfsg-3 linux-libc-dev_5.13.0-19.19 lockfile-progs_0.1.19 login_1:4.8.1-1ubuntu9 logsave_1.46.3-1ubuntu3 lsb-base_11.1.0ubuntu3 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+------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Thu Sep 9 05:00:38 2021 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./gff2aplot_2.0-14.dsc dpkg-source: info: extracting gff2aplot in /<> dpkg-source: info: unpacking gff2aplot_2.0.orig.tar.gz dpkg-source: info: unpacking gff2aplot_2.0-14.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying non_lexical_loop_iterator.patch dpkg-source: info: applying 02-blat2gff.diff dpkg-source: info: applying 03-parseblast.diff dpkg-source: info: applying use-dpkg-buildflags.patch dpkg-source: info: applying mayhem.patch dpkg-source: info: applying fis-privacy-breach.patch dpkg-source: info: applying perl_5.28.patch dpkg-source: info: applying fix_install_ali2gff.patch dpkg-source: info: applying enhance_sprintf_buffer.patch dpkg-source: info: applying fix_README_used_for_test.patch dpkg-source: info: applying fix_gff_comments.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-22295148 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-22295148 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-22295148 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package gff2aplot dpkg-buildpackage: info: source version 2.0-14 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -f src/ali2gff/ali2gff bin/ali2gff make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>' ### /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. ### RUNNING MAKEFILE ### ### Finishing PERL script from "src/gff2aplot.pl" -> "bin/gff2aplot.pl" /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. ### Thu Oct 21 03:52:03 UTC 2021 -- buildd ### ### Finishing PERL script from "src/parseblast.pl" -> "bin/parseblast.pl" /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. ### Finishing PERL script from "src/blat2gff.pl" -> "bin/blat2gff.pl" /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. ### Finishing PERL script from "src/sim2gff.pl" -> "bin/sim2gff.pl" ### Making ALI2GFF... ### ### MAKEFILE DONE... make[2]: Entering directory '/<>/src/ali2gff' ### ali2gff.c: In function ‘main’: ali2gff.c:88:15: warning: variable ‘ptr’ set but not used [-Wunused-but-set-variable] 88 | char *ptr; | ^~~ ali2gff.c: In function ‘processMumfile’: ali2gff.c:527:86: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 527 | if (DEBUG) fprintf(stderr,"gap data: length %d-20=%d\n%s\n%s\n%s\n",strlen(seq1),strlen(seq1)-20,seq1,seq2,err); | ~^ ~~~~~~~~~~~~ | | | | int size_t {aka long unsigned int} | %ld ali2gff.c:527:92: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 527 | if (DEBUG) fprintf(stderr,"gap data: length %d-20=%d\n%s\n%s\n%s\n",strlen(seq1),strlen(seq1)-20,seq1,seq2,err); | ~^ ~~~~~~~~~~~~~~~ | | | | int size_t {aka long unsigned int} | %ld ali2gff.c:768:86: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 768 | if (DEBUG) fprintf(stderr,"gap data: length %d-20=%d\n%s\n%s\n%s\n",strlen(seq1),strlen(seq1)-20,seq1,seq2,err); | ~^ ~~~~~~~~~~~~ | | | | int size_t {aka long unsigned int} | %ld ali2gff.c:768:92: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 768 | if (DEBUG) fprintf(stderr,"gap data: length %d-20=%d\n%s\n%s\n%s\n",strlen(seq1),strlen(seq1)-20,seq1,seq2,err); | ~^ ~~~~~~~~~~~~~~~ | | | | int size_t {aka long unsigned int} | %ld ali2gff.c: In function ‘processGFFfile’: ali2gff.c:355:113: warning: ‘%s’ directive writing up to 999 bytes into a region of size between 0 and 999 [-Wformat-overflow=] 355 | else sprintf(aliPrintString,"%s:%s\t%s\talignment\t%lu:%lu\t%lu:%lu\t%s\t%s\t%s\n", xName,yName,source,xb,yb,xe,ye,scores,strands,frames); | ^~ ~~~~~ In file included from /usr/include/stdio.h:888, from ali2gff.h:20, from ali2gff.c:64: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:38:10: note: ‘__sprintf_chk’ output 25 or more bytes (assuming 4028) into a destination of size 1000 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ali2gff.c:354:113: warning: ‘%s’ directive writing up to 999 bytes into a region of size between 0 and 999 [-Wformat-overflow=] 354 | if (sscanf(scores,"%f",&score) == 1) sprintf(aliPrintString,"%s:%s\t%s\talignment\t%lu:%lu\t%lu:%lu\t%5.3f\t%s\t%s\n",xName,yName,source,xb,yb,xe,ye,score ,strands,frames); | ^~ ~~~~~ In file included from /usr/include/stdio.h:888, from ali2gff.h:20, from ali2gff.c:64: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:38:10: note: ‘__sprintf_chk’ output 30 or more bytes (assuming 2034) into a destination of size 1000 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ali2gff.c:351:113: warning: ‘%s’ directive writing up to 999 bytes into a region of size between 0 and 999 [-Wformat-overflow=] 351 | else sprintf(aliPrintString,"%s:%s\t%s\talignment\t%lu:%lu\t%lu:%lu\t%s\t%s\t%s\t%s", xName,yName,source,xb,yb,xe,ye,scores,strands,frames,cptr); | ^~ ~~~~~ In file included from /usr/include/stdio.h:888, from ali2gff.h:20, from ali2gff.c:64: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:38:10: note: ‘__sprintf_chk’ output 25 or more bytes (assuming 4028) into a destination of size 1000 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ali2gff.c:350:113: warning: ‘%s’ directive writing up to 999 bytes into a region of size between 0 and 999 [-Wformat-overflow=] 350 | if (sscanf(scores,"%f",&score) == 1) sprintf(aliPrintString,"%s:%s\t%s\talignment\t%lu:%lu\t%lu:%lu\t%5.3f\t%s\t%s\t%s",xName,yName,source,xb,yb,xe,ye,score ,strands,frames,cptr); | ^~ ~~~~~ In file included from /usr/include/stdio.h:888, from ali2gff.h:20, from ali2gff.c:64: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:38:10: note: ‘__sprintf_chk’ output 30 or more bytes (assuming 2034) into a destination of size 1000 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ali2gff.c:300:113: warning: ‘%s’ directive writing up to 999 bytes into a region of size between 0 and 999 [-Wformat-overflow=] 300 | else sprintf(aliPrintString,"%s:%s\t%s\talignment\t%lu:%lu\t%lu:%lu\t%s\t%s\t%s\n", yName,xName,source,yb,xb,ye,xe,scores,strands,frames); | ^~ ~~~~~ In file included from /usr/include/stdio.h:888, from ali2gff.h:20, from ali2gff.c:64: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:38:10: note: ‘__sprintf_chk’ output 25 or more bytes (assuming 4028) into a destination of size 1000 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ali2gff.c:299:113: warning: ‘%s’ directive writing up to 999 bytes into a region of size between 0 and 999 [-Wformat-overflow=] 299 | if (sscanf(scores,"%f",&score) == 1) sprintf(aliPrintString,"%s:%s\t%s\talignment\t%lu:%lu\t%lu:%lu\t%5.3f\t%s\t%s\n",yName,xName,source,yb,xb,ye,xe,score,strands,frames); | ^~ ~~~~~ In file included from /usr/include/stdio.h:888, from ali2gff.h:20, from ali2gff.c:64: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:38:10: note: ‘__sprintf_chk’ output 30 or more bytes (assuming 2034) into a destination of size 1000 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ali2gff.c:296:113: warning: ‘%s’ directive writing up to 999 bytes into a region of size between 0 and 999 [-Wformat-overflow=] 296 | else sprintf(aliPrintString,"%s:%s\t%s\talignment\t%lu:%lu\t%lu:%lu\t%s\t%s\t%s\t%s", yName,xName,source,yb,xb,ye,xe,scores,strands,frames,cptr); | ^~ ~~~~~ In file included from /usr/include/stdio.h:888, from ali2gff.h:20, from ali2gff.c:64: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:38:10: note: ‘__sprintf_chk’ output 25 or more bytes (assuming 4028) into a destination of size 1000 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ali2gff.c:295:113: warning: ‘%s’ directive writing up to 999 bytes into a region of size between 0 and 999 [-Wformat-overflow=] 295 | if (sscanf(scores,"%f",&score) == 1) sprintf(aliPrintString,"%s:%s\t%s\talignment\t%lu:%lu\t%lu:%lu\t%5.3f\t%s\t%s\t%s",yName,xName,source,yb,xb,ye,xe,score,strands,frames,cptr); | ^~ ~~~~~ In file included from /usr/include/stdio.h:888, from ali2gff.h:20, from ali2gff.c:64: /usr/include/powerpc64le-linux-gnu/bits/stdio2.h:38:10: note: ‘__sprintf_chk’ output 30 or more bytes (assuming 2034) into a destination of size 1000 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ali2gff.c: In function ‘processMumfile’: ali2gff.c:732:40: warning: ‘score’ may be used uninitialized in this function [-Wmaybe-uninitialized] 732 | score = (score - errCount)/score; // match percentage | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ali2gff.c: In function ‘processSimfile’: ali2gff.c:1073:50: warning: ‘yrev’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1073 | ye = yrev-ye; | ~~~~^~~ ali2gff.c:1064:62: warning: ‘yseqLen_4’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1064 | if (!opt_i || ((xe - xb < xseqLen_4) && (ye - yb < yseqLen_4))) { | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ ali2gff.c:1064:36: warning: ‘xseqLen_4’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1064 | if (!opt_i || ((xe - xb < xseqLen_4) && (ye - yb < yseqLen_4))) { | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:519, from ali2gff.h:22, from ali2gff.c:64: In function ‘strncpy’, inlined from ‘main’ at ali2gff.c:135:2: /usr/include/powerpc64le-linux-gnu/bits/string_fortified.h:95:10: warning: ‘strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/<>/src/ali2gff' mkdir -p ./bin cp ./src/ali2gff/ali2gff \ ./bin/ali2gff /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. mode of 'bin/gff2aplot.pl' changed from 0644 (rw-r--r--) to 0755 (rwxr-xr-x) mode of 'bin/parseblast.pl' changed from 0644 (rw-r--r--) to 0755 (rwxr-xr-x) mode of 'bin/blat2gff.pl' changed from 0644 (rw-r--r--) to 0755 (rwxr-xr-x) mode of 'bin/sim2gff.pl' changed from 0644 (rw-r--r--) to 0755 (rwxr-xr-x) make[1]: Leaving directory '/<>' dh_auto_test -a make -j4 test make[1]: Entering directory '/<>' ### SORRY !!! Tests were not implemented yet... make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a dh_installdirs -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' for script in `find bin -name "*.pl"` ; do mv $script bin/`basename $script .pl` ; done make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a dh_installchangelogs -a debian/rules override_dh_installexamples make[1]: Entering directory '/<>' dh_installexamples # Fix path names, silence GS find debian/*/usr/share/doc/*/examples -name README -exec sed -i \ -e 's?^$BIN/\([0-9a-z]\+\)\.pl?\1?' \ -e 's?^$BIN/\([0-9a-z]\+\) ?\1 ?' \ -e 's?^GS=.*;?GS="gs -q" ;?' \{\} \; make[1]: Leaving directory '/<>' dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a -a dh_strip -a -a d180f4d1608b1305c768ffe1f9b2ed9933bdc479 dh_makeshlibs -a -a dh_shlibdeps -a -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. INFO: pkgstriptranslations version 148 INFO: pkgstriptranslations version 148 pkgstriptranslations: processing gff2aplot (in debian/gff2aplot); do_strip: , oemstrip: pkgstriptranslations: processing gff2aplot-dbgsym (in debian/.debhelper/gff2aplot/dbgsym-root); do_strip: , oemstrip: /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgstripfiles: processing control file: debian/gff2aplot/DEBIAN/control, package gff2aplot, directory debian/gff2aplot pkgstripfiles: Truncating usr/share/doc/gff2aplot/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package gff2aplot ... pkgstripfiles: No PNG files. dpkg-deb: building package 'gff2aplot' in '../gff2aplot_2.0-14_ppc64el.deb'. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgstripfiles: processing control file: debian/.debhelper/gff2aplot/dbgsym-root/DEBIAN/control, package gff2aplot-dbgsym, directory debian/.debhelper/gff2aplot/dbgsym-root dpkg-deb: building package 'gff2aplot-dbgsym' in 'debian/.debhelper/scratch-space/build-gff2aplot/gff2aplot-dbgsym_2.0-14_ppc64el.deb'. Renaming gff2aplot-dbgsym_2.0-14_ppc64el.deb to gff2aplot-dbgsym_2.0-14_ppc64el.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../gff2aplot_2.0-14_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-10-21T03:52:14Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ gff2aplot_2.0-14_ppc64el.changes: --------------------------------- Format: 1.8 Date: Thu, 09 Sep 2021 06:58:51 +0200 Source: gff2aplot Binary: gff2aplot Built-For-Profiles: noudeb Architecture: ppc64el Version: 2.0-14 Distribution: jammy-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: gff2aplot - pair-wise alignment-plots for genomic sequences in PostScript Changes: gff2aplot (2.0-14) unstable; urgency=medium . [ Andreas Tille ] * Fix homepage * Define HOME=/tmp to enable salsa-ci building this package . [ Diane Trout ] * Update watch file to new upsream location . [ Andreas Tille ] * Standards-Version: 4.6.0 (routine-update) * No tab in license text (routine-update) Checksums-Sha1: 25bc15e3e2482b03259b5ad9bd8d7b6d4c200f56 25290 gff2aplot-dbgsym_2.0-14_ppc64el.ddeb 7f22129e1479987f5d86eceec55c0c14c9ce1c51 5742 gff2aplot_2.0-14_ppc64el.buildinfo f1c8830e8d56a92ee640569bd1deb555fe4038f4 261740 gff2aplot_2.0-14_ppc64el.deb Checksums-Sha256: 0f1883eda834b8168f209749925581484176d485b3d2876a0b41ca6b389e4cf6 25290 gff2aplot-dbgsym_2.0-14_ppc64el.ddeb 387cfb27f8557c6d49aaad43d846adf10193261e9d00a5dd321f2b2f7bfa948c 5742 gff2aplot_2.0-14_ppc64el.buildinfo 62d95716638c64093fb9ff153da11fe0d45830e4385577426307d537a016b3c1 261740 gff2aplot_2.0-14_ppc64el.deb Files: 131f3799fbd3c834bfdae3884a916789 25290 debug optional gff2aplot-dbgsym_2.0-14_ppc64el.ddeb 4b83a6f2483a6be6b6019cebcd632d47 5742 science optional gff2aplot_2.0-14_ppc64el.buildinfo a968303f1dd5bac6bb54a1c9cc94e47c 261740 science optional gff2aplot_2.0-14_ppc64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: gff2aplot Binary: gff2aplot gff2aplot-dbgsym Architecture: ppc64el Version: 2.0-14 Checksums-Md5: 131f3799fbd3c834bfdae3884a916789 25290 gff2aplot-dbgsym_2.0-14_ppc64el.ddeb a968303f1dd5bac6bb54a1c9cc94e47c 261740 gff2aplot_2.0-14_ppc64el.deb Checksums-Sha1: 25bc15e3e2482b03259b5ad9bd8d7b6d4c200f56 25290 gff2aplot-dbgsym_2.0-14_ppc64el.ddeb f1c8830e8d56a92ee640569bd1deb555fe4038f4 261740 gff2aplot_2.0-14_ppc64el.deb Checksums-Sha256: 0f1883eda834b8168f209749925581484176d485b3d2876a0b41ca6b389e4cf6 25290 gff2aplot-dbgsym_2.0-14_ppc64el.ddeb 62d95716638c64093fb9ff153da11fe0d45830e4385577426307d537a016b3c1 261740 gff2aplot_2.0-14_ppc64el.deb Build-Origin: Ubuntu Build-Architecture: ppc64el Build-Date: Thu, 21 Oct 2021 03:52:13 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.4-2), autopoint (= 0.21-4ubuntu3), autotools-dev (= 20180224.1+nmu1), base-files (= 12ubuntu1), base-passwd (= 3.5.52), bash (= 5.1-3ubuntu2), binutils (= 2.37-7ubuntu1), binutils-common (= 2.37-7ubuntu1), binutils-powerpc64le-linux-gnu (= 2.37-7ubuntu1), bsdextrautils (= 2.36.1-8ubuntu2), bsdutils (= 1:2.36.1-8ubuntu2), build-essential (= 12.9ubuntu2), bzip2 (= 1.0.8-4ubuntu4), coreutils (= 8.32-4ubuntu3), cpp (= 4:11.2.0-1ubuntu1), cpp-11 (= 11.2.0-7ubuntu2), dash (= 0.5.11+git20210120+802ebd4-1build1), debconf (= 1.5.77), debhelper (= 13.3.4ubuntu2), debianutils (= 5.5-1), debugedit (= 1:5.0-0ubuntu2), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.12.0-1), diffutils (= 1:3.8-0ubuntu1), dpkg (= 1.20.9ubuntu2), dpkg-dev (= 1.20.9ubuntu2), dwz (= 0.14-1build1), file (= 1:5.39-3build1), findutils (= 4.8.0-1ubuntu2), g++ (= 4:11.2.0-1ubuntu1), g++-11 (= 11.2.0-7ubuntu2), gcc (= 4:11.2.0-1ubuntu1), gcc-11 (= 11.2.0-7ubuntu2), gcc-11-base (= 11.2.0-7ubuntu2), gettext (= 0.21-4ubuntu3), gettext-base (= 0.21-4ubuntu3), grep (= 3.7-0ubuntu1), groff-base (= 1.22.4-7), gzip (= 1.10-4ubuntu2), hostname (= 3.23ubuntu1), init-system-helpers (= 1.60build1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-10ubuntu2), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.2.0-7ubuntu2), libatomic1 (= 11.2.0-7ubuntu2), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0-2ubuntu3), libaudit1 (= 1:3.0-2ubuntu3), libbinutils (= 2.37-7ubuntu1), libblkid1 (= 2.36.1-8ubuntu2), libbz2-1.0 (= 1.0.8-4ubuntu4), libc-bin (= 2.34-0ubuntu3), libc-dev-bin (= 2.34-0ubuntu3), libc6 (= 2.34-0ubuntu3), libc6-dev (= 2.34-0ubuntu3), libcap-ng0 (= 0.7.9-2.2build2), libcap2 (= 1:2.44-1build2), libcc1-0 (= 11.2.0-7ubuntu2), libcom-err2 (= 1.46.3-1ubuntu3), libcrypt-dev (= 1:4.4.18-4ubuntu2), libcrypt1 (= 1:4.4.18-4ubuntu2), libctf-nobfd0 (= 2.37-7ubuntu1), libctf0 (= 2.37-7ubuntu1), libdb5.3 (= 5.3.28+dfsg1-0.8ubuntu2), libdebconfclient0 (= 0.256ubuntu4), libdebhelper-perl (= 13.3.4ubuntu2), libdpkg-perl (= 1.20.9ubuntu2), libdw1 (= 0.185-2), libelf1 (= 0.185-2), libfile-stripnondeterminism-perl (= 1.12.0-1), libgcc-11-dev (= 11.2.0-7ubuntu2), libgcc-s1 (= 11.2.0-7ubuntu2), libgcrypt20 (= 1.8.7-5ubuntu2), libgdbm-compat4 (= 1.22-1), libgdbm6 (= 1.22-1), libgmp10 (= 2:6.2.1+dfsg-1ubuntu3), libgomp1 (= 11.2.0-7ubuntu2), libgpg-error0 (= 1.42-3), libgssapi-krb5-2 (= 1.18.3-7), libicu67 (= 67.1-7ubuntu1), libisl23 (= 0.24-2), libitm1 (= 11.2.0-7ubuntu2), libk5crypto3 (= 1.18.3-7), libkeyutils1 (= 1.6.1-2ubuntu2), libkrb5-3 (= 1.18.3-7), libkrb5support0 (= 1.18.3-7), liblsan0 (= 11.2.0-7ubuntu2), liblz4-1 (= 1.9.3-2build1), liblzma5 (= 5.2.5-2build1), libmagic-mgc (= 1:5.39-3build1), libmagic1 (= 1:5.39-3build1), libmount1 (= 2.36.1-8ubuntu2), libmpc3 (= 1.2.1-1), libmpfr6 (= 4.1.0-3build2), libnsl-dev (= 1.3.0-2build1), libnsl2 (= 1.3.0-2build1), libpam-modules (= 1.3.1-5ubuntu11), libpam-modules-bin (= 1.3.1-5ubuntu11), libpam-runtime (= 1.3.1-5ubuntu11), libpam0g (= 1.3.1-5ubuntu11), libpcre2-8-0 (= 10.37-0ubuntu2), libpcre3 (= 2:8.39-13build4), libperl5.32 (= 5.32.1-3ubuntu3), libpipeline1 (= 1.5.3-1build1), libquadmath0 (= 11.2.0-7ubuntu2), libseccomp2 (= 2.5.1-1ubuntu2), libselinux1 (= 3.1-3build3), libsigsegv2 (= 2.13-1ubuntu2), libsmartcols1 (= 2.36.1-8ubuntu2), libssl1.1 (= 1.1.1l-1ubuntu1), libstdc++-11-dev (= 11.2.0-7ubuntu2), libstdc++6 (= 11.2.0-7ubuntu2), libsub-override-perl (= 0.09-2), libsystemd0 (= 248.3-1ubuntu8), libtinfo6 (= 6.2+20210905-1), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15build1), libtsan0 (= 11.2.0-7ubuntu2), libubsan1 (= 11.2.0-7ubuntu2), libuchardet0 (= 0.0.7-1build1), libudev1 (= 248.3-1ubuntu8), libunistring2 (= 0.9.10-6), libuuid1 (= 2.36.1-8ubuntu2), libxml2 (= 2.9.12+dfsg-5), libzstd1 (= 1.4.8+dfsg-3), linux-libc-dev (= 5.13.0-19.19), login (= 1:4.8.1-1ubuntu9), lsb-base (= 11.1.0ubuntu3), lto-disabled-list (= 16), m4 (= 1.4.18-5ubuntu1), make (= 4.3-4ubuntu2), man-db (= 2.9.4-2build1), mawk (= 1.3.4.20200120-2build1), ncurses-base (= 6.2+20210905-1), ncurses-bin (= 6.2+20210905-1), patch (= 2.7.6-7build1), perl (= 5.32.1-3ubuntu3), perl-base (= 5.32.1-3ubuntu3), perl-modules-5.32 (= 5.32.1-3ubuntu3), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.2-0ubuntu5), sed (= 4.7-1ubuntu2), sensible-utils (= 0.0.17), sysvinit-utils (= 2.96-7ubuntu2), tar (= 1.34+dfsg-1build2), util-linux (= 2.36.1-8ubuntu2), xz-utils (= 5.2.5-2build1), zlib1g (= 1:1.2.11.dfsg-2ubuntu7) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1631163531" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ gff2aplot_2.0-14_ppc64el.deb ---------------------------- new Debian package, version 2.0. size 261740 bytes: control archive=3466 bytes. 2924 bytes, 50 lines control 5626 bytes, 66 lines md5sums Package: gff2aplot Version: 2.0-14 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1484 Depends: libc6 (>= 2.34), perl:any Recommends: graphicsmagick | imagemagick, ghostscript Suggests: postscript-viewer, gff2ps Section: science Priority: optional Homepage: https://genome.crg.es/software/gfftools/GFF2APLOT.html Description: pair-wise alignment-plots for genomic sequences in PostScript A program to visualize the alignment of two genomic sequences together with their annotations. From GFF-format input files it produces PostScript figures for that alignment. The following menu lists many features of gff2aplot: * Comprehensive alignment plots for any GFF-feature. Attributes are defined separately so you can modify only whatsoever attributes for a given file or share same customization across different data-sets. * All parameters are set by default within the program, but it can be also fully configured via gff2ps-like flexible customization files. Program can handle several of such files, summarizing all the settings before producing the corresponding figure. Moreover, all customization parameters can be set via command-line switches, which allows users to play with those parameters before adding any to a customization file. * Source order is taken from input files, if you swap file order you can visualize alignment and its annotation with the new input arrangement. * All alignment scores can be visualized in a PiP box below gff2aplot area, using grey-color scale, user-defined color scale or score-dependent gradients. * Scalable fonts, which can also be chosen among the basic PostScript default fonts. Feature and group labels can be rotated to improve readability in both annotation axes. * The program is still defined as a Unix filter so it can handle data from files, redirections and pipes, writing output to standard-output and warnings to standard error. * gff2aplot is able to manage many physical page formats (from A0 to A10, and more -see available page sizes in its manual-), including user-defined ones. This allows, for instance, the generation of poster size genomic maps, or the use of a continuous-paper supporting plotting device, either in portrait or landscape. * You can draw different alignments on same alignment plot and distinguish them by using different colors for each. * Shape dictionary has been expanded, so that further feature shapes are now available (see manual). * Annotation projections through alignment plots (so called ribbons) emulate transparencies via complementary color fill patterns. 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Build-Space: n/a Build-Time: 12 Distribution: jammy-proposed Host Architecture: ppc64el Install-Time: 9 Job: gff2aplot_2.0-14.dsc Machine Architecture: ppc64el Package: gff2aplot Package-Time: 22 Source-Version: 2.0-14 Space: n/a Status: successful Version: 2.0-14 -------------------------------------------------------------------------------- Finished at 2021-10-21T03:52:14Z Build needed 00:00:22, no disk space Adding user buildd to group lxd RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=jammy --arch=ppc64el PACKAGEBUILD-22295148 Scanning for processes to kill in build PACKAGEBUILD-22295148