gmap 2019-01-24-1 source package in Ubuntu

Changelog

gmap (2019-01-24-1) unstable; urgency=medium

  [ Andreas Tille ]
  * New upstream version
  * debhelper 12
  * Standards-Version: 4.3.0
  * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target

  [ Alexandre Mestiashvili ]
  * Drop bigendian.patch, as gmap is build for amd64 only
  * Set Architecture to amd64 in d/control
  * Remove overrides for gmapl* and gsnapl*

 -- Alexandre Mestiashvili <email address hidden>  Thu, 31 Jan 2019 19:39:59 +0100

Upload details

Uploaded by:
Debian Med on 2019-01-31
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
amd64
Section:
science
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Eoan release on 2019-04-18 multiverse science
Disco release on 2019-02-01 multiverse science

Builds

Disco: [FULLYBUILT] amd64

Downloads

File Size SHA-256 Checksum
gmap_2019-01-24-1.dsc 2.0 KiB d14a298d3ad78b6917c129868785cf4e58f162d70797e3f8dbecc68c0e26de64
gmap_2019-01-24.orig.tar.xz 2.8 MiB 9ddc500575040fc7de8648adcea4952ed757023249c3d1127671c2b56986f613
gmap_2019-01-24-1.debian.tar.xz 8.9 KiB 43c10caca9bbb1225c0957517ee945702e33f3d67df37cd5c1094dd0a19df9b4

No changes file available.

Binary packages built by this source

gmap: spliced and SNP-tolerant alignment for mRNA and short reads

 This package contains the programs GMAP and GSNAP as well as
 utilities to manage genome databases in GMAP/GSNAP format.
 GMAP (Genomic Mapping and Alignment Program) is a tool for aligning
 EST, mRNA and cDNA sequences.
 GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for
 aligning single-end and paired-end transcriptome reads.
 Both tools can use a database of
  * known splice sites and identify novel splice sites.
  * known single-nucleotide polymorphisms (SNPs).
 GSNAP can align bisulfite-treated DNA.

gmap-dbgsym: debug symbols for gmap