gubbins 2.3.1-1 source package in Ubuntu


gubbins (2.3.1-1) unstable; urgency=medium

  * Team upload.
  * New upstream release.
  * Bump Standards-Version.

 -- Sascha Steinbiss <email address hidden>  Sun, 01 Oct 2017 11:59:00 +0100

Upload details

Uploaded by:
Debian Med on 2017-10-01
Uploaded to:
Original maintainer:
Debian Med
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Cosmic release on 2018-05-01 universe misc
Bionic release on 2017-11-02 universe misc


File Size SHA-256 Checksum
gubbins_2.3.1-1.dsc 1.8 KiB 5b7e6778b7059ba3d26f192d04f120b4574c861136ad664f356aa287ec506566
gubbins_2.3.1.orig.tar.gz 635.4 KiB 61ff6ffd1612d4ecaaba4e1d0f2f6c7a30cde1635068b3a15f8c619426daf9c3
gubbins_2.3.1-1.debian.tar.xz 5.9 KiB 303fe7e20ffa8080ee0a648c0e05542683979508a193ddcaaefb9d02641e79fc

Available diffs

No changes file available.

Binary packages built by this source

gubbins: phylogenetic analysis of genome sequences

 Gubbins supports rapid phylogenetic analysis of large samples of
 recombinant bacterial whole genome sequences.
 Gubbins (Genealogies Unbiased By recomBinations In Nucleotide
 Sequences) is an algorithm that iteratively identifies loci containing
 elevated densities of base substitutions while concurrently constructing
 a phylogeny based on the putative point mutations outside of these
 regions. Simulations demonstrate the algorithm generates highly accurate
 reconstructions under realistic models of short-term bacterial
 evolution, and can be run in only a few hours on alignments of hundreds
 of bacterial genome sequences.

gubbins-dbgsym: debug symbols for gubbins