RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '1093057-2369693', '/home/buildd/filecache-default/a41bfa4400299c761e51ea25115e36344dadece3'] Synching the system clock with the buildd NTP service... 25 Jun 10:07:06 ntpdate[1890]: adjust time server 10.122.37.1 offset 0.000091 sec Unpacking chroot for build 1093057-2369693 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '1093057-2369693'] Mounting chroot for build 1093057-2369693 RUN: /usr/share/launchpad-buildd/slavebin/apply-ogre-model ['apply-ogre-model', '1093057-2369693', 'universe'] Attempting OGRE for universe in build-1093057-2369693 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '1093057-2369693', 'deb http://ftpmaster.internal/ubuntu karmic main universe'] Overriding sources.list in build-1093057-2369693 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '1093057-2369693'] Updating debian chroot for build 1093057-2369693 Get:1 http://ftpmaster.internal karmic Release.gpg [189B] Get:2 http://ftpmaster.internal karmic Release [74.6kB] Get:3 http://ftpmaster.internal karmic/main Packages [1282kB] Get:4 http://ftpmaster.internal karmic/universe Packages [5067kB] Fetched 6423kB in 3s (1708kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: apt base-files bash-completion binutils bsdutils bzip2 coreutils cpio cpp-4.4 diff e2fslibs e2fsprogs fakeroot findutils g++-4.4 gcc-4.4 gcc-4.4-base initscripts libblkid1 libbz2-1.0 libc6 libc6-dev libcomerr2 libdb4.6 libgcc1 libgmp3c2 libgmpxx4ldbl libgomp1 libmpfr1ldbl libncurses5 libppl-c2 libppl7 libselinux1 libsepol1 libslang2 libss2 libstdc++6 libstdc++6-4.4-dev libuuid1 libvolume-id1 linux-libc-dev login lsb-base make mktemp mount ncurses-base ncurses-bin passwd perl perl-base perl-modules pkg-create-dbgsym pkgbinarymangler python2.6-minimal sed sysv-rc sysvinit-utils tar tzdata upstart upstart-compat-sysv util-linux zlib1g 64 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 0B/51.1MB of archives. After this operation, 106kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! base-files coreutils diff linux-libc-dev libc6-dev libgomp1 cpp-4.4 gcc-4.4-base libgcc1 gcc-4.4 g++-4.4 libstdc++6-4.4-dev libstdc++6 libgmp3c2 libgmpxx4ldbl libmpfr1ldbl libppl-c2 libppl7 zlib1g binutils findutils libc6 libselinux1 passwd libuuid1 libblkid1 e2fsprogs login libsepol1 mount ncurses-bin perl-modules libdb4.6 perl perl-base sed tar lsb-base tzdata util-linux mktemp bsdutils libncurses5 ncurses-base sysvinit-utils sysv-rc initscripts upstart-compat-sysv upstart apt libcomerr2 e2fslibs libslang2 libss2 python2.6-minimal libvolume-id1 bzip2 libbz2-1.0 cpio make bash-completion fakeroot pkg-create-dbgsym pkgbinarymangler Extracting templates from packages: 46% Extracting templates from packages: 93% Extracting templates from packages: 100% Preconfiguring packages ... Authentication warning overridden. (Reading database ... 9292 files and directories currently installed.) Preparing to replace base-files 5.0.0ubuntu1 (using .../base-files_5.0.0ubuntu2_amd64.deb) ... Unpacking replacement base-files ... Setting up base-files (5.0.0ubuntu2) ... Installing new version of config file /etc/dpkg/origins/ubuntu ... (Reading database ... 9292 files and directories currently installed.) Preparing to replace coreutils 7.2-1 (using .../coreutils_7.4-2_amd64.deb) ... Unpacking replacement coreutils ... Replacing files in old package mktemp ... Setting up coreutils (7.4-2) ... (Reading database ... 9294 files and directories currently installed.) Preparing to replace diff 2.8.1-12ubuntu1 (using .../diff_2.8.1-13_amd64.deb) ... Unpacking replacement diff ... Setting up diff (2.8.1-13) ... (Reading database ... 9294 files and directories currently installed.) Preparing to replace linux-libc-dev 2.6.30-1.2 (using .../linux-libc-dev_2.6.30-10.12_amd64.deb) ... Unpacking replacement linux-libc-dev ... 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Preparing to replace binutils 2.19.51.20090423-0ubuntu2 (using .../binutils_2.19.51.20090622-0ubuntu1_amd64.deb) ... Unpacking replacement binutils ... Preparing to replace findutils 4.4.0-2ubuntu4 (using .../findutils_4.4.2-1_amd64.deb) ... Unpacking replacement findutils ... Setting up findutils (4.4.2-1) ... (Reading database ... 9294 files and directories currently installed.) Preparing to replace libc6 2.9-4ubuntu6 (using .../libc6_2.9-9ubuntu2_amd64.deb) ... Checking for services that may need to be restarted... Checking init scripts... Unpacking replacement libc6 ... Setting up libc6 (2.9-9ubuntu2) ... Installing new version of config file /etc/init.d/glibc.sh ... Checking for services that may need to be restarted... Checking init scripts... Nothing to restart. Processing triggers for libc6 ... ldconfig deferred processing now taking place (Reading database ... 9294 files and directories currently installed.) Preparing to replace libselinux1 2.0.65-5build1 (using .../libselinux1_2.0.71-1_amd64.deb) ... Unpacking replacement libselinux1 ... Setting up libselinux1 (2.0.71-1) ... Processing triggers for libc6 ... ldconfig deferred processing now taking place (Reading database ... 9294 files and directories currently installed.) Preparing to replace passwd 1:4.1.1-6ubuntu6 (using .../passwd_1%3a4.1.4.1-1ubuntu1_amd64.deb) ... Unpacking replacement passwd ... Setting up passwd (1:4.1.4.1-1ubuntu1) ... Installing new version of config file /etc/pam.d/newusers ... (Reading database ... 9290 files and directories currently installed.) Preparing to replace libuuid1 1.41.5-1ubuntu1 (using .../libuuid1_1.41.5-1ubuntu3_amd64.deb) ... Unpacking replacement libuuid1 ... Setting up libuuid1 (1.41.5-1ubuntu3) ... Processing triggers for libc6 ... ldconfig deferred processing now taking place (Reading database ... 9290 files and directories currently installed.) 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(Reading database ... 9283 files and directories currently installed.) Preparing to replace libsepol1 2.0.30-2ubuntu1 (using .../libsepol1_2.0.32-1ubuntu1_amd64.deb) ... Unpacking replacement libsepol1 ... Setting up libsepol1 (2.0.32-1ubuntu1) ... Processing triggers for libc6 ... ldconfig deferred processing now taking place (Reading database ... 9283 files and directories currently installed.) Preparing to replace mount 2.14.2-1ubuntu4 (using .../mount_2.15.1~rc1-1ubuntu2_amd64.deb) ... Unpacking replacement mount ... Setting up mount (2.15.1~rc1-1ubuntu2) ... (Reading database ... 9283 files and directories currently installed.) Preparing to replace ncurses-bin 5.7+20090207-1ubuntu1 (using .../ncurses-bin_5.7+20090523-1ubuntu1_amd64.deb) ... Unpacking replacement ncurses-bin ... Setting up ncurses-bin (5.7+20090523-1ubuntu1) ... (Reading database ... 9283 files and directories currently installed.) 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(Reading database ... 9286 files and directories currently installed.) Preparing to replace lsb-base 3.2-20ubuntu4 (using .../lsb-base_4.0-0ubuntu2_all.deb) ... Unpacking replacement lsb-base ... Setting up lsb-base (4.0-0ubuntu2) ... (Reading database ... 9286 files and directories currently installed.) Preparing to replace tzdata 2009g-1ubuntu1 (using .../tzdata_2009j-0ubuntu1_all.deb) ... Unpacking replacement tzdata ... Setting up tzdata (2009j-0ubuntu1) ... Current default timezone: 'Etc/UTC' Local time is now: Thu Jun 25 09:08:29 UTC 2009. Universal Time is now: Thu Jun 25 09:08:29 UTC 2009. Run 'dpkg-reconfigure tzdata' if you wish to change it. (Reading database ... 9286 files and directories currently installed.) Preparing to replace util-linux 2.14.2-1ubuntu4 (using .../util-linux_2.15.1~rc1-1ubuntu2_amd64.deb) ... Unpacking replacement util-linux ... Setting up util-linux (2.15.1~rc1-1ubuntu2) ... (Reading database ... 9295 files and directories currently installed.) 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Setting up ncurses-base (5.7+20090523-1ubuntu1) ... (Reading database ... 9295 files and directories currently installed.) Preparing to replace sysvinit-utils 2.86.ds1-61ubuntu11 (using .../sysvinit-utils_2.86.ds1-61ubuntu12_amd64.deb) ... Unpacking replacement sysvinit-utils ... Setting up sysvinit-utils (2.86.ds1-61ubuntu12) ... (Reading database ... 9295 files and directories currently installed.) Preparing to replace sysv-rc 2.86.ds1-61ubuntu11 (using .../sysv-rc_2.86.ds1-61ubuntu12_all.deb) ... Unpacking replacement sysv-rc ... Preparing to replace initscripts 2.86.ds1-61ubuntu11 (using .../initscripts_2.86.ds1-61ubuntu12_amd64.deb) ... Unpacking replacement initscripts ... Preparing to replace upstart-compat-sysv 0.3.9-8 (using .../upstart-compat-sysv_0.3.10-2_amd64.deb) ... Unpacking replacement upstart-compat-sysv ... Preparing to replace upstart 0.3.9-8 (using .../upstart_0.3.10-2_amd64.deb) ... Unpacking replacement upstart ... 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Unpacking replacement pkg-create-dbgsym ... Preparing to replace pkgbinarymangler 57 (using .../pkgbinarymangler_59_all.deb) ... Unpacking replacement pkgbinarymangler ... Setting up linux-libc-dev (2.6.30-10.12) ... Setting up libc6-dev (2.9-9ubuntu2) ... Setting up libgomp1 (4.4.0-8ubuntu2) ... Setting up libgmp3c2 (2:4.3.1+dfsg-1ubuntu2) ... Setting up libgmpxx4ldbl (2:4.3.1+dfsg-1ubuntu2) ... Setting up libmpfr1ldbl (2.4.1-1ubuntu1) ... Setting up libppl7 (0.10.2-2) ... Setting up libppl-c2 (0.10.2-2) ... Setting up cpp-4.4 (4.4.0-8ubuntu2) ... Setting up binutils (2.19.51.20090622-0ubuntu1) ... Setting up gcc-4.4 (4.4.0-8ubuntu2) ... Setting up libdb4.6 (4.6.21-13ubuntu2) ... Setting up sysv-rc (2.86.ds1-61ubuntu12) ... Setting up initscripts (2.86.ds1-61ubuntu12) ... Setting up upstart (0.3.10-2) ... Setting up upstart-compat-sysv (0.3.10-2) ... Installing new version of config file /etc/event.d/rc-default ... Installing new version of config file /etc/event.d/rcS ... Installing new version of config file /etc/event.d/rcS-sulogin ... Setting up libbz2-1.0 (1.0.5-2ubuntu1) ... Setting up bzip2 (1.0.5-2ubuntu1) ... Setting up cpio (2.10-1ubuntu1) ... Setting up make (3.81-6) ... Setting up bash-completion (1:1.0-3) ... Installing new version of config file /etc/bash_completion ... Setting up fakeroot (1.12.4ubuntu1) ... Setting up pkg-create-dbgsym (0.29) ... Setting up pkgbinarymangler (59) ... Installing new version of config file /etc/pkgbinarymangler/maintainermangler.overrides ... Setting up perl-modules (5.10.0-23ubuntu1) ... Setting up libstdc++6-4.4-dev (4.4.0-8ubuntu2) ... Setting up g++-4.4 (4.4.0-8ubuntu2) ... Setting up perl (5.10.0-23ubuntu1) ... Processing triggers for libc6 ... ldconfig deferred processing now taking place RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '1093057-2369693', '--nolog', '--batch', '--archive=ubuntu', '--purpose=PRIMARY', '--dist=karmic', '--comp=universe', 'h5utils_1.12-1.dsc'] Initiating build Automatic build of h5utils_1.12-1 on yellow by sbuild/amd64 1.170.5 Build started at 20090625-1009 ****************************************************************************** h5utils_1.12-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 7), libhdf5-serial-dev (>= 1.6.5), libz-dev, libpng-dev, hdf5-tools, libhdf4g-dev, libmatheval1-dev, octave3.0-headers, quilt Checking for already installed source dependencies... debhelper: missing libhdf5-serial-dev: missing libz-dev: missing libpng-dev: missing hdf5-tools: missing libhdf4g-dev: missing libmatheval1-dev: missing octave3.0-headers: missing quilt: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper libhdf5-serial-dev libz-dev libpng-dev hdf5-tools libhdf4g-dev libmatheval1-dev octave3.0-headers quilt Reading package lists... Building dependency tree... Reading state information... Note, selecting zlib1g-dev instead of libz-dev Note, selecting libpng12-dev instead of libpng-dev The following packages were automatically installed and are no longer required: libvolume-id1 Use 'apt-get autoremove' to remove them. The following extra packages will be installed: bsdmainutils ca-certificates diffstat file gettext gettext-base gfortran gfortran-4.4 groff-base html2text intltool-debian libblas-dev libblas3gf libcolamd-3.2.0 libcroco3 libcurl3-gnutls libfftw3-3 libfftw3-dev libgcrypt11 libgfortran3 libglib2.0-0 libglpk0 libgnutls26 libgpg-error0 libgssapi-krb5-2 libhdf4g libhdf5-serial-1.6.6-0 libidn11 libjpeg62 libjpeg62-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3gf libldap-2.4-2 libltdl7 libmagic1 libmatheval1 libncurses5-dev libpng12-0 libpng12-dev libqhull5 libreadline5 libreadline5-dev libsasl2-2 libsasl2-modules libssl0.9.8 libsuitesparse-3.2.0 libtasn1-3 libxml2 man-db octave3.0 octave3.0-common openssl po-debconf readline-common texinfo zlib1g-dev Suggested packages: wamerican wordlist whois vacation dh-make cvs gettext-doc gfortran-multilib gfortran-doc gfortran-4.4-multilib gfortran-4.4-doc libgfortran3-dbg groff rng-tools libiodbc2-dev libmysqlclient15-dev gnutls-bin krb5-doc krb5-user libhdf4g-doc hdf4-tools libhdf5-doc libsasl2-modules-otp libsasl2-modules-ldap libsasl2-modules-sql libsasl2-modules-gssapi-mit libsasl2-modules-gssapi-heimdal less www-browser octave3.0-info octave3.0-doc octave3.0-htmldoc octave3.0-emacsen openssl-doc libmail-box-perl procmail graphviz texlive-base texlive-latex-base texlive-generic-recommended texinfo-doc-nonfree Recommended packages: curl wget lynx libglib2.0-data shared-mime-info xml-core gnuplot libatlas3gf-base libmail-sendmail-perl The following NEW packages will be installed: bsdmainutils ca-certificates debhelper diffstat file gettext gettext-base gfortran gfortran-4.4 groff-base hdf5-tools html2text intltool-debian libblas-dev libblas3gf libcolamd-3.2.0 libcroco3 libcurl3-gnutls libfftw3-3 libfftw3-dev libgcrypt11 libgfortran3 libglib2.0-0 libglpk0 libgnutls26 libgpg-error0 libgssapi-krb5-2 libhdf4g libhdf4g-dev libhdf5-serial-1.6.6-0 libhdf5-serial-dev libidn11 libjpeg62 libjpeg62-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3gf libldap-2.4-2 libltdl7 libmagic1 libmatheval1 libmatheval1-dev libncurses5-dev libpng12-0 libpng12-dev libqhull5 libreadline5 libreadline5-dev libsasl2-2 libsasl2-modules libssl0.9.8 libsuitesparse-3.2.0 libtasn1-3 libxml2 man-db octave3.0 octave3.0-common octave3.0-headers openssl po-debconf quilt readline-common texinfo zlib1g-dev 0 upgraded, 67 newly installed, 0 to remove and 0 not upgraded. Need to get 11.6MB/46.7MB of archives. After this operation, 144MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libssl0.9.8 openssl ca-certificates libmagic1 file libgpg-error0 libgcrypt11 libtasn1-3 libgnutls26 libkeyutils1 libkrb5support0 libk5crypto3 libkrb5-3 libgssapi-krb5-2 libidn11 libsasl2-modules libsasl2-2 libldap-2.4-2 libcurl3-gnutls readline-common libreadline5 bsdmainutils gettext-base groff-base libxml2 man-db html2text libglib2.0-0 libcroco3 gettext intltool-debian po-debconf debhelper diffstat libgfortran3 gfortran-4.4 gfortran libhdf5-serial-1.6.6-0 hdf5-tools libblas3gf libblas-dev libcolamd-3.2.0 libfftw3-3 libfftw3-dev libltdl7 libglpk0 libjpeg62 libhdf4g zlib1g-dev libjpeg62-dev libhdf4g-dev libhdf5-serial-dev liblapack3gf liblapack-dev libmatheval1 libmatheval1-dev libncurses5-dev libpng12-0 libpng12-dev libqhull5 libreadline5-dev libsuitesparse-3.2.0 texinfo octave3.0-common octave3.0 octave3.0-headers quilt Authentication warning overridden. Get:1 http://ftpmaster.internal karmic/main ca-certificates 20090624 [146kB] Get:2 http://ftpmaster.internal karmic/universe hdf5-tools 1.6.6-4ubuntu2 [263kB] Get:3 http://ftpmaster.internal karmic/main libcolamd-3.2.0 1:3.2.0-4ubuntu2 [23.6kB] Get:4 http://ftpmaster.internal karmic/universe libglpk0 4.38-1 [410kB] Get:5 http://ftpmaster.internal karmic/universe libhdf4g 4.1r4-22 [327kB] Get:6 http://ftpmaster.internal karmic/universe libhdf4g-dev 4.1r4-22 [494kB] Get:7 http://ftpmaster.internal karmic/universe libmatheval1 1.1.7-1 [22.4kB] Get:8 http://ftpmaster.internal karmic/universe libmatheval1-dev 1.1.7-1 [48.5kB] Get:9 http://ftpmaster.internal karmic/universe libqhull5 2009.1-1 [158kB] Get:10 http://ftpmaster.internal karmic/main libsuitesparse-3.2.0 1:3.2.0-4ubuntu2 [1089kB] Get:11 http://ftpmaster.internal karmic/universe octave3.0-common 1:3.0.5-6ubuntu1 [668kB] Get:12 http://ftpmaster.internal karmic/universe octave3.0 1:3.0.5-6ubuntu1 [7530kB] Get:13 http://ftpmaster.internal karmic/universe octave3.0-headers 1:3.0.5-6ubuntu1 [416kB] dpkg-preconfigure: unable to re-open stdin: Fetched 11.6MB in 0s (17.5MB/s) Selecting previously deselected package libssl0.9.8. (Reading database ... 9301 files and directories currently installed.) Unpacking libssl0.9.8 (from .../libssl0.9.8_0.9.8g-16ubuntu1_amd64.deb) ... Selecting previously deselected package openssl. Unpacking openssl (from .../openssl_0.9.8g-16ubuntu1_amd64.deb) ... Selecting previously deselected package ca-certificates. Unpacking ca-certificates (from .../ca-certificates_20090624_all.deb) ... Selecting previously deselected package libmagic1. Unpacking libmagic1 (from .../libmagic1_5.03-1ubuntu1_amd64.deb) ... Selecting previously deselected package file. Unpacking file (from .../file_5.03-1ubuntu1_amd64.deb) ... Selecting previously deselected package libgpg-error0. Unpacking libgpg-error0 (from .../libgpg-error0_1.6-1ubuntu1_amd64.deb) ... Selecting previously deselected package libgcrypt11. Unpacking libgcrypt11 (from .../libgcrypt11_1.4.4-2ubuntu1_amd64.deb) ... Selecting previously deselected package libtasn1-3. Unpacking libtasn1-3 (from .../libtasn1-3_2.2-1_amd64.deb) ... Selecting previously deselected package libgnutls26. Unpacking libgnutls26 (from .../libgnutls26_2.6.6-1_amd64.deb) ... Selecting previously deselected package libkeyutils1. Unpacking libkeyutils1 (from .../libkeyutils1_1.2-10_amd64.deb) ... Selecting previously deselected package libkrb5support0. Unpacking libkrb5support0 (from .../libkrb5support0_1.7dfsg~beta3-1_amd64.deb) ... Selecting previously deselected package libk5crypto3. Unpacking libk5crypto3 (from .../libk5crypto3_1.7dfsg~beta3-1_amd64.deb) ... Selecting previously deselected package libkrb5-3. Unpacking libkrb5-3 (from .../libkrb5-3_1.7dfsg~beta3-1_amd64.deb) ... Selecting previously deselected package libgssapi-krb5-2. Unpacking libgssapi-krb5-2 (from .../libgssapi-krb5-2_1.7dfsg~beta3-1_amd64.deb) ... Selecting previously deselected package libidn11. Unpacking libidn11 (from .../libidn11_1.15-1_amd64.deb) ... Selecting previously deselected package libsasl2-modules. Unpacking libsasl2-modules (from .../libsasl2-modules_2.1.23.dfsg1-1ubuntu1_amd64.deb) ... Selecting previously deselected package libsasl2-2. Unpacking libsasl2-2 (from .../libsasl2-2_2.1.23.dfsg1-1ubuntu1_amd64.deb) ... Selecting previously deselected package libldap-2.4-2. Unpacking libldap-2.4-2 (from .../libldap-2.4-2_2.4.15-1.1ubuntu1_amd64.deb) ... Selecting previously deselected package libcurl3-gnutls. Unpacking libcurl3-gnutls (from .../libcurl3-gnutls_7.19.5-1ubuntu1_amd64.deb) ... Selecting previously deselected package readline-common. Unpacking readline-common (from .../readline-common_5.2-4_all.deb) ... Selecting previously deselected package libreadline5. Unpacking libreadline5 (from .../libreadline5_5.2-4_amd64.deb) ... Selecting previously deselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_6.1.10ubuntu4_amd64.deb) ... Selecting previously deselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.17-6ubuntu2_amd64.deb) ... Selecting previously deselected package groff-base. Unpacking groff-base (from .../groff-base_1.18.1.1-22build1_amd64.deb) ... Selecting previously deselected package libxml2. Unpacking libxml2 (from .../libxml2_2.7.3.dfsg-1ubuntu1_amd64.deb) ... Selecting previously deselected package man-db. Unpacking man-db (from .../man-db_2.5.5-2_amd64.deb) ... Selecting previously deselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-14_amd64.deb) ... Selecting previously deselected package libglib2.0-0. Unpacking libglib2.0-0 (from .../libglib2.0-0_2.21.2-0ubuntu1_amd64.deb) ... Selecting previously deselected package libcroco3. Unpacking libcroco3 (from .../libcroco3_0.6.1-2_amd64.deb) ... Selecting previously deselected package gettext. Unpacking gettext (from .../gettext_0.17-6ubuntu2_amd64.deb) ... Selecting previously deselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously deselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.16_all.deb) ... Selecting previously deselected package debhelper. Unpacking debhelper (from .../debhelper_7.2.14ubuntu1_all.deb) ... Selecting previously deselected package diffstat. Unpacking diffstat (from .../diffstat_1.47-1_amd64.deb) ... Selecting previously deselected package libgfortran3. Unpacking libgfortran3 (from .../libgfortran3_4.4.0-8ubuntu2_amd64.deb) ... Selecting previously deselected package gfortran-4.4. Unpacking gfortran-4.4 (from .../gfortran-4.4_4.4.0-8ubuntu2_amd64.deb) ... Selecting previously deselected package gfortran. Unpacking gfortran (from .../gfortran_4%3a4.4.0-3ubuntu1_amd64.deb) ... Selecting previously deselected package libhdf5-serial-1.6.6-0. Unpacking libhdf5-serial-1.6.6-0 (from .../libhdf5-serial-1.6.6-0_1.6.6-4ubuntu2_amd64.deb) ... Selecting previously deselected package hdf5-tools. Unpacking hdf5-tools (from .../hdf5-tools_1.6.6-4ubuntu2_amd64.deb) ... Selecting previously deselected package libblas3gf. Unpacking libblas3gf (from .../libblas3gf_1.2-2_amd64.deb) ... Selecting previously deselected package libblas-dev. Unpacking libblas-dev (from .../libblas-dev_1.2-2_amd64.deb) ... Selecting previously deselected package libcolamd-3.2.0. Unpacking libcolamd-3.2.0 (from .../libcolamd-3.2.0_1%3a3.2.0-4ubuntu2_amd64.deb) ... Selecting previously deselected package libfftw3-3. Unpacking libfftw3-3 (from .../libfftw3-3_3.2.1-2ubuntu1_amd64.deb) ... Selecting previously deselected package libfftw3-dev. Unpacking libfftw3-dev (from .../libfftw3-dev_3.2.1-2ubuntu1_amd64.deb) ... Selecting previously deselected package libltdl7. Unpacking libltdl7 (from .../libltdl7_2.2.6a-4_amd64.deb) ... Selecting previously deselected package libglpk0. Unpacking libglpk0 (from .../libglpk0_4.38-1_amd64.deb) ... Selecting previously deselected package libjpeg62. Unpacking libjpeg62 (from .../libjpeg62_6b-14build1_amd64.deb) ... Selecting previously deselected package libhdf4g. Unpacking libhdf4g (from .../libhdf4g_4.1r4-22_amd64.deb) ... Selecting previously deselected package zlib1g-dev. Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.3.dfsg-13ubuntu1_amd64.deb) ... Selecting previously deselected package libjpeg62-dev. Unpacking libjpeg62-dev (from .../libjpeg62-dev_6b-14build1_amd64.deb) ... Selecting previously deselected package libhdf4g-dev. Unpacking libhdf4g-dev (from .../libhdf4g-dev_4.1r4-22_amd64.deb) ... Selecting previously deselected package libhdf5-serial-dev. Unpacking libhdf5-serial-dev (from .../libhdf5-serial-dev_1.6.6-4ubuntu2_amd64.deb) ... Selecting previously deselected package liblapack3gf. Unpacking liblapack3gf (from .../liblapack3gf_3.2.1-1_amd64.deb) ... Selecting previously deselected package liblapack-dev. Unpacking liblapack-dev (from .../liblapack-dev_3.2.1-1_amd64.deb) ... Selecting previously deselected package libmatheval1. Unpacking libmatheval1 (from .../libmatheval1_1.1.7-1_amd64.deb) ... Selecting previously deselected package libmatheval1-dev. Unpacking libmatheval1-dev (from .../libmatheval1-dev_1.1.7-1_amd64.deb) ... Selecting previously deselected package libncurses5-dev. Unpacking libncurses5-dev (from .../libncurses5-dev_5.7+20090523-1ubuntu1_amd64.deb) ... Selecting previously deselected package libpng12-0. Unpacking libpng12-0 (from .../libpng12-0_1.2.37-1_amd64.deb) ... Selecting previously deselected package libpng12-dev. Unpacking libpng12-dev (from .../libpng12-dev_1.2.37-1_amd64.deb) ... Selecting previously deselected package libqhull5. Unpacking libqhull5 (from .../libqhull5_2009.1-1_amd64.deb) ... Selecting previously deselected package libreadline5-dev. Unpacking libreadline5-dev (from .../libreadline5-dev_5.2-4_amd64.deb) ... Selecting previously deselected package libsuitesparse-3.2.0. Unpacking libsuitesparse-3.2.0 (from .../libsuitesparse-3.2.0_1%3a3.2.0-4ubuntu2_amd64.deb) ... Selecting previously deselected package texinfo. Unpacking texinfo (from .../texinfo_4.13a.dfsg.1-4_amd64.deb) ... Selecting previously deselected package octave3.0-common. Unpacking octave3.0-common (from .../octave3.0-common_1%3a3.0.5-6ubuntu1_all.deb) ... Selecting previously deselected package octave3.0. Unpacking octave3.0 (from .../octave3.0_1%3a3.0.5-6ubuntu1_amd64.deb) ... Selecting previously deselected package octave3.0-headers. Unpacking octave3.0-headers (from .../octave3.0-headers_1%3a3.0.5-6ubuntu1_amd64.deb) ... Selecting previously deselected package quilt. Unpacking quilt (from .../archives/quilt_0.46-7_all.deb) ... Setting up libssl0.9.8 (0.9.8g-16ubuntu1) ... Setting up openssl (0.9.8g-16ubuntu1) ... Setting up ca-certificates (20090624) ... Updating certificates in /etc/ssl/certs... 143 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d....done. Setting up libmagic1 (5.03-1ubuntu1) ... Setting up file (5.03-1ubuntu1) ... Setting up libgpg-error0 (1.6-1ubuntu1) ... Setting up libgcrypt11 (1.4.4-2ubuntu1) ... Setting up libtasn1-3 (2.2-1) ... Setting up libgnutls26 (2.6.6-1) ... Setting up libkeyutils1 (1.2-10) ... Setting up libkrb5support0 (1.7dfsg~beta3-1) ... Setting up libk5crypto3 (1.7dfsg~beta3-1) ... Setting up libkrb5-3 (1.7dfsg~beta3-1) ... Setting up libgssapi-krb5-2 (1.7dfsg~beta3-1) ... Setting up libidn11 (1.15-1) ... Setting up readline-common (5.2-4) ... Setting up libreadline5 (5.2-4) ... Setting up bsdmainutils (6.1.10ubuntu4) ... Setting up gettext-base (0.17-6ubuntu2) ... Setting up groff-base (1.18.1.1-22build1) ... Setting up libxml2 (2.7.3.dfsg-1ubuntu1) ... Setting up man-db (2.5.5-2) ... Building database of manual pages ... ... skipping, since this is a buildd Setting up html2text (1.3.2a-14) ... Setting up libglib2.0-0 (2.21.2-0ubuntu1) ... Setting up libcroco3 (0.6.1-2) ... Setting up gettext (0.17-6ubuntu2) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16) ... Setting up debhelper (7.2.14ubuntu1) ... Setting up diffstat (1.47-1) ... Setting up libgfortran3 (4.4.0-8ubuntu2) ... Setting up gfortran-4.4 (4.4.0-8ubuntu2) ... Setting up gfortran (4:4.4.0-3ubuntu1) ... Setting up libhdf5-serial-1.6.6-0 (1.6.6-4ubuntu2) ... Setting up hdf5-tools (1.6.6-4ubuntu2) ... Setting up libblas3gf (1.2-2) ... Setting up libblas-dev (1.2-2) ... Setting up libcolamd-3.2.0 (1:3.2.0-4ubuntu2) ... Setting up libfftw3-3 (3.2.1-2ubuntu1) ... Setting up libfftw3-dev (3.2.1-2ubuntu1) ... Setting up libltdl7 (2.2.6a-4) ... Setting up libglpk0 (4.38-1) ... Setting up libjpeg62 (6b-14build1) ... Setting up libhdf4g (4.1r4-22) ... Setting up zlib1g-dev (1:1.2.3.3.dfsg-13ubuntu1) ... Setting up libjpeg62-dev (6b-14build1) ... Setting up libhdf4g-dev (4.1r4-22) ... Setting up libhdf5-serial-dev (1.6.6-4ubuntu2) ... Setting up liblapack3gf (3.2.1-1) ... Setting up liblapack-dev (3.2.1-1) ... Setting up libmatheval1 (1.1.7-1) ... Setting up libmatheval1-dev (1.1.7-1) ... Setting up libncurses5-dev (5.7+20090523-1ubuntu1) ... Setting up libpng12-0 (1.2.37-1) ... Setting up libpng12-dev (1.2.37-1) ... Setting up libqhull5 (2009.1-1) ... Setting up libreadline5-dev (5.2-4) ... Setting up libsuitesparse-3.2.0 (1:3.2.0-4ubuntu2) ... Setting up texinfo (4.13a.dfsg.1-4) ... Setting up octave3.0-common (1:3.0.5-6ubuntu1) ... Setting up quilt (0.46-7) ... Setting up libsasl2-modules (2.1.23.dfsg1-1ubuntu1) ... Setting up libsasl2-2 (2.1.23.dfsg1-1ubuntu1) ... Setting up libldap-2.4-2 (2.4.15-1.1ubuntu1) ... Setting up libcurl3-gnutls (7.19.5-1ubuntu1) ... Setting up octave3.0 (1:3.0.5-6ubuntu1) ... recreating package description from octave_packages warning: directory octave_packages is not a valid package Setting up octave3.0-headers (1:3.0.5-6ubuntu1) ... Processing triggers for libc6 ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.9-9ubuntu2 make_3.81-6 dpkg-dev_1.14.24ubuntu2 g++-4.4_4.4.0-8ubuntu2 gcc-4.4_4.4.0-8ubuntu2 binutils_2.19.51.20090622-0ubuntu1 libstdc++6_4.4.0-8ubuntu2 libstdc++6-4.4-dev_4.4.0-8ubuntu2 ------------------------------------------------------------------------------ sh: gcc: not found dpkg-source: warning: Couldn't determine gcc system type, falling back to default (native compilation) gpg: Signature made Wed Jun 24 14:52:08 2009 BST using DSA key ID E9F2C747 gpg: Can't check signature: public key not found dpkg-source: extracting h5utils in h5utils-1.12 dpkg-source: unpacking h5utils_1.12.orig.tar.gz dpkg-source: applying /home/buildd/build-1093057-2369693/h5utils_1.12-1.diff.gz dpkg-buildpackage: set CFLAGS to default value: -g -O2 dpkg-buildpackage: set CPPFLAGS to default value: dpkg-buildpackage: set LDFLAGS to default value: -Wl,-Bsymbolic-functions dpkg-buildpackage: set FFLAGS to default value: -g -O2 dpkg-buildpackage: set CXXFLAGS to default value: -g -O2 dpkg-buildpackage: source package h5utils dpkg-buildpackage: source version 1.12-1 dpkg-buildpackage: host architecture amd64 /usr/bin/fakeroot debian/rules clean QUILT_PATCHES=debian/patches quilt pop -a || true No patch removed rm -rf .pc patch-stamp dh_testdir dh_testroot [ ! -f Makefile ] || /usr/bin/make distclean dh_clean h5read.oct debian/rules build QUILT_PATCHES=debian/patches quilt push --color=auto -a Applying patch octave.diff patching file aclocal.m4 patching file compile patching file config.h.in~ patching file configure patching file configure.ac patching file depcomp patching file INSTALL patching file install-sh patching file Makefile.in patching file missing Now at patch octave.diff touch patch-stamp dh_testdir ./configure --prefix=/usr --mandir=\${prefix}/share/man \ --host=x86_64-linux-gnu --build=x86_64-linux-gnu \ --with-octave --with-hdf4 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of x86_64-linux-gnu-gcc... gcc3 checking whether x86_64-linux-gnu-gcc and cc understand -c and -o together... yes checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sin in -lm... yes checking for snprintf... yes checking for inflate in -lz... yes checking for png_create_write_struct in -lpng... yes checking for evaluator_get_variables in -lmatheval... yes checking for h4toh5... no checking for h5toh4... no checking for jpeg_start_compress in -ljpeg... yes checking for DFSDgetdata in -ldf... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking hdf.h usability... no checking hdf.h presence... no checking for hdf.h... no checking hdf/hdf.h usability... yes checking hdf/hdf.h presence... yes checking for hdf/hdf.h... yes checking for H5Fopen in -lhdf5... yes checking for mkoctfile... mkoctfile checking for octave... octave checking where octave plugins go... /usr/lib/octave/3.0.5/oct/x86_64-pc-linux-gnu checking for v5dCreate in -lv5d... no checking vis5d/v5d.h usability... no checking vis5d/v5d.h presence... no checking for vis5d/v5d.h... no checking vis5d+/v5d.h usability... no checking vis5d+/v5d.h presence... no checking for vis5d+/v5d.h... no checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking for stdint.h... (cached) yes checking for inttypes.h... (cached) yes checking for uint16_t... yes checking for uint32_t... yes checking for htons... yes checking size of float... 4 checking for htonl... yes configure: creating ./config.status config.status: creating Makefile config.status: creating h5topng.1 config.status: creating config.h config.status: executing depfiles commands dh_testdir /usr/bin/make make[1]: Entering directory `/build/buildd/h5utils-1.12' /usr/bin/make all-am make[2]: Entering directory `/build/buildd/h5utils-1.12' x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE -g -O2 -MT h5totxt.o -MD -MP -MF .deps/h5totxt.Tpo -c -o h5totxt.o h5totxt.c mv -f .deps/h5totxt.Tpo .deps/h5totxt.Po x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE -g -O2 -MT arrayh5.o -MD -MP -MF .deps/arrayh5.Tpo -c -o arrayh5.o arrayh5.c mv -f .deps/arrayh5.Tpo .deps/arrayh5.Po x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE -g -O2 -MT h5utils.o -MD -MP -MF .deps/h5utils.Tpo -c -o h5utils.o h5utils.c mv -f .deps/h5utils.Tpo .deps/h5utils.Po x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5totxt h5totxt.o arrayh5.o h5utils.o -lhdf5 -lz -lm x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE -g -O2 -MT h5fromtxt.o -MD -MP -MF .deps/h5fromtxt.Tpo -c -o h5fromtxt.o h5fromtxt.c mv -f .deps/h5fromtxt.Tpo .deps/h5fromtxt.Po x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5fromtxt h5fromtxt.o arrayh5.o h5utils.o -lhdf5 -lz -lm x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE -g -O2 -MT h5tovtk.o -MD -MP -MF .deps/h5tovtk.Tpo -c -o h5tovtk.o h5tovtk.c mv -f .deps/h5tovtk.Tpo .deps/h5tovtk.Po x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5tovtk h5tovtk.o arrayh5.o h5utils.o -lhdf5 -lz -lm x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE -g -O2 -MT h4fromh5.o -MD -MP -MF .deps/h4fromh5.Tpo -c -o h4fromh5.o h4fromh5.c mv -f .deps/h4fromh5.Tpo .deps/h4fromh5.Po x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE -g -O2 -MT arrayh4.o -MD -MP -MF .deps/arrayh4.Tpo -c -o arrayh4.o arrayh4.c mv -f .deps/arrayh4.Tpo .deps/arrayh4.Po x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h4fromh5 h4fromh5.o arrayh4.o arrayh5.o h5utils.o -ldf -ljpeg -lhdf5 -lz -lm x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE -g -O2 -MT h5fromh4.o -MD -MP -MF .deps/h5fromh4.Tpo -c -o h5fromh4.o h5fromh4.c mv -f .deps/h5fromh4.Tpo .deps/h5fromh4.Po x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5fromh4 h5fromh4.o arrayh4.o arrayh5.o h5utils.o -ldf -ljpeg -lhdf5 -lz -lm x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE -g -O2 -MT h5math.o -MD -MP -MF .deps/h5math.Tpo -c -o h5math.o h5math.c h5math.c: In function 'main': h5math.c:260: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result mv -f .deps/h5math.Tpo .deps/h5math.Po x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5math h5math.o arrayh5.o h5utils.o -lmatheval -lhdf5 -lz -lm x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE -g -O2 -MT h5topng.o -MD -MP -MF .deps/h5topng.Tpo -c -o h5topng.o h5topng.c mv -f .deps/h5topng.Tpo .deps/h5topng.Po x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE -g -O2 -MT writepng.o -MD -MP -MF .deps/writepng.Tpo -c -o writepng.o writepng.c mv -f .deps/writepng.Tpo .deps/writepng.Po x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5topng h5topng.o writepng.o arrayh5.o h5utils.o -lpng -lhdf5 -lz -lm x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE -g -O2 -MT h5fromitxt.o -MD -MP -MF .deps/h5fromitxt.Tpo -c -o h5fromitxt.o h5fromitxt.c mv -f .deps/h5fromitxt.Tpo .deps/h5fromitxt.Po x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5fromitxt h5fromitxt.o arrayh5.o h5utils.o -lhdf5 -lz -lm mkoctfile -DHAVE_CONFIG_H -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE ./h5read.cc ./arrayh5.c -Wl,-Bsymbolic-functions -lhdf5 -lz -lm ./h5read.cc: In function 'octave_value_list Fh5read(const octave_value_list&, int)': ./h5read.cc:52: warning: 'void print_usage(const std::string&)' is deprecated (declared at /usr/include/octave-3.0.5/octave/defun-int.h:38) make[2]: Leaving directory `/build/buildd/h5utils-1.12' make[1]: Leaving directory `/build/buildd/h5utils-1.12' touch build-stamp /usr/bin/fakeroot debian/rules binary-arch dh_testdir dh_testroot dh_prep dh_installdirs /usr/bin/make install DESTDIR=/build/buildd/h5utils-1.12/debian/h5utils make[1]: Entering directory `/build/buildd/h5utils-1.12' x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5totxt h5totxt.o arrayh5.o h5utils.o -lhdf5 -lz -lm x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5fromtxt h5fromtxt.o arrayh5.o h5utils.o -lhdf5 -lz -lm x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5tovtk h5tovtk.o arrayh5.o h5utils.o -lhdf5 -lz -lm x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h4fromh5 h4fromh5.o arrayh4.o arrayh5.o h5utils.o -ldf -ljpeg -lhdf5 -lz -lm x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5fromh4 h5fromh4.o arrayh4.o arrayh5.o h5utils.o -ldf -ljpeg -lhdf5 -lz -lm x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5math h5math.o arrayh5.o h5utils.o -lmatheval -lhdf5 -lz -lm x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5topng h5topng.o writepng.o arrayh5.o h5utils.o -lpng -lhdf5 -lz -lm x86_64-linux-gnu-gcc -g -O2 -Wl,-Bsymbolic-functions -o h5fromitxt h5fromitxt.o arrayh5.o h5utils.o -lhdf5 -lz -lm make[2]: Entering directory `/build/buildd/h5utils-1.12' test -z "/usr/bin" || /bin/mkdir -p "/build/buildd/h5utils-1.12/debian/h5utils/usr/bin" /usr/bin/install -c 'h5totxt' '/build/buildd/h5utils-1.12/debian/h5utils/usr/bin/h5totxt' /usr/bin/install -c 'h5fromtxt' '/build/buildd/h5utils-1.12/debian/h5utils/usr/bin/h5fromtxt' /usr/bin/install -c 'h5tovtk' '/build/buildd/h5utils-1.12/debian/h5utils/usr/bin/h5tovtk' /usr/bin/install -c 'h4fromh5' '/build/buildd/h5utils-1.12/debian/h5utils/usr/bin/h4fromh5' /usr/bin/install -c 'h5fromh4' '/build/buildd/h5utils-1.12/debian/h5utils/usr/bin/h5fromh4' /usr/bin/install -c 'h5math' '/build/buildd/h5utils-1.12/debian/h5utils/usr/bin/h5math' /usr/bin/install -c 'h5topng' '/build/buildd/h5utils-1.12/debian/h5utils/usr/bin/h5topng' test -z "/usr/share/man/man1" || /bin/mkdir -p "/build/buildd/h5utils-1.12/debian/h5utils/usr/share/man/man1" /usr/bin/install -c -m 644 'h5totxt.1' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/man/man1/h5totxt.1' /usr/bin/install -c -m 644 'h5fromtxt.1' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/man/man1/h5fromtxt.1' /usr/bin/install -c -m 644 'h5tovtk.1' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/man/man1/h5tovtk.1' /usr/bin/install -c -m 644 'h5fromh4.1' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/man/man1/h5fromh4.1' /usr/bin/install -c -m 644 'h5math.1' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/man/man1/h5math.1' /usr/bin/install -c -m 644 'h5topng.1' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/man/man1/h5topng.1' test -z "/usr/share/h5utils" || /bin/mkdir -p "/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils" /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/autumn' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/autumn' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/bluered' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/bluered' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/bone' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/bone' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/colorcube' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/colorcube' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/cool' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/cool' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/copper' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/copper' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/flag' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/flag' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/gray' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/gray' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/green' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/green' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/hot' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/hot' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/hsv' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/hsv' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/jet' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/jet' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/lines' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/lines' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/pink' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/pink' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/prism' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/prism' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/spring' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/spring' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/summer' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/summer' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/vga' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/vga' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/winter' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/winter' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/yarg' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/yarg' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/yellow' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/yellow' /bin/bash /build/buildd/h5utils-1.12/install-sh -c -m 644 'colormaps/dkbluered' '/build/buildd/h5utils-1.12/debian/h5utils/usr/share/h5utils/colormaps/dkbluered' test -z "/usr/lib/octave/3.0.5/oct/x86_64-pc-linux-gnu" || /bin/mkdir -p "/build/buildd/h5utils-1.12/debian/h5utils/usr/lib/octave/3.0.5/oct/x86_64-pc-linux-gnu" /usr/bin/install -c -m 644 'h5read.oct' '/build/buildd/h5utils-1.12/debian/h5utils/usr/lib/octave/3.0.5/oct/x86_64-pc-linux-gnu/h5read.oct' make[2]: Leaving directory `/build/buildd/h5utils-1.12' make[1]: Leaving directory `/build/buildd/h5utils-1.12' dh_testdir dh_testroot dh_installdocs dh_installexamples dh_installmenu dh_installman dh_installchangelogs ChangeLog dh_link dh_strip dh_strip debug symbol extraction: all non-arch-all packages for this build platform amd64: h5utils dh_strip debug symbol extraction: packages to act on: h5utils dh_strip debug symbol extraction: ignored packages: pkgstriptranslations: processing control file: ./debian/h5utils-dbgsym/DEBIAN/control, package h5utils-dbgsym, directory ./debian/h5utils-dbgsym pkgstriptranslations: h5utils-dbgsym does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " warning, `/build/buildd/h5utils-1.12/debian/h5utils-dbgsym/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `h5utils-dbgsym' in `../h5utils-dbgsym_1.12-1_amd64.ddeb'. dh_compress dh_fixperms dh_installdeb dh_shlibdeps dpkg-shlibdeps: warning: dependency on libz.so.1 could be avoided if "debian/h5utils/usr/bin/h5tovtk debian/h5utils/usr/bin/h5topng debian/h5utils/usr/bin/h5math debian/h5utils/usr/bin/h5fromh4 debian/h5utils/usr/bin/h5fromtxt debian/h5utils/usr/bin/h5totxt debian/h5utils/usr/bin/h4fromh5" were not uselessly linked against it (they use none of its symbols). dpkg-shlibdeps: warning: dependency on libjpeg.so.62 could be avoided if "debian/h5utils/usr/bin/h5fromh4 debian/h5utils/usr/bin/h4fromh5" were not uselessly linked against it (they use none of its symbols). dh_gencontrol dh_md5sums dh_builddeb pkgstriptranslations: processing control file: ./debian/h5utils/DEBIAN/control, package h5utils, directory ./debian/h5utils pkgstriptranslations: h5utils does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " warning, `debian/h5utils/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `h5utils' in `../h5utils_1.12-1_amd64.deb'. dpkg-genchanges -B -mUbuntu/amd64 Build Daemon >../h5utils_1.12-1_amd64.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20090625-1010 Publishing debug debs. chroot-autobuild/build/buildd/h5utils_1.12-1_amd64.deb: new debian package, version 2.0. size 247342 bytes: control archive= 2033 bytes. 1234 bytes, 25 lines control 2684 bytes, 41 lines md5sums Package: h5utils Version: 1.12-1 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian GIS Project Installed-Size: 980 Depends: libc6 (>= 2.4), libhdf4g (>= 4.1r4), libhdf5-serial-1.6.6-0 | libhdf5-1.6.6-0, libjpeg62, libmatheval1, libpng12-0 (>= 1.2.13-4), zlib1g (>= 1:1.1.4) Recommends: hdf5-tools Section: science Priority: optional Homepage: http://ab-initio.mit.edu/h5utils/ Description: HDF5 files visualization tools HDF5 (Hierarchical Data Format 5) is a file format for storing scientific data. These tools allow to convert other formats to HDF5 and to visualize HDF5 files. They include: - h5topng, which extracts a 2d slice of an HDF5 file and outputs a corresponding image in PNG format; - h5totxt, which extracts 2d slices and outputs comma-delimited text (suitable for import into a spreadsheet); - h5fromtxt, which converts simple text input into multi-dimensional numeric HDF5 datasets; - h5fromh4, which converts HDF4 data to HDF5; - h5tovtk, which converts HDF5 files to VTK files for visualization with VTK-aware programs; - h5read, a plugin for the Octave numerical language. chroot-autobuild/build/buildd/h5utils_1.12-1_amd64.deb: drwxr-xr-x root/root 0 2009-06-25 10:10 ./ drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/ drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/bin/ -rwxr-xr-x root/root 22832 2009-06-25 10:10 ./usr/bin/h5totxt -rwxr-xr-x root/root 22864 2009-06-25 10:10 ./usr/bin/h5fromtxt -rwxr-xr-x root/root 22864 2009-06-25 10:10 ./usr/bin/h5tovtk -rwxr-xr-x root/root 22896 2009-06-25 10:10 ./usr/bin/h4fromh5 -rwxr-xr-x root/root 22896 2009-06-25 10:10 ./usr/bin/h5fromh4 -rwxr-xr-x root/root 27008 2009-06-25 10:10 ./usr/bin/h5math -rwxr-xr-x root/root 39552 2009-06-25 10:10 ./usr/bin/h5topng drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/share/ drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/share/man/ drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/share/man/man1/ -rw-r--r-- root/root 2920 2009-06-25 10:10 ./usr/share/man/man1/h5tovtk.1.gz -rw-r--r-- root/root 1746 2009-06-25 10:10 ./usr/share/man/man1/h5fromh4.1.gz -rw-r--r-- root/root 3073 2009-06-25 10:10 ./usr/share/man/man1/h5math.1.gz -rw-r--r-- root/root 3952 2009-06-25 10:10 ./usr/share/man/man1/h5topng.1.gz -rw-r--r-- root/root 2276 2009-06-25 10:10 ./usr/share/man/man1/h5totxt.1.gz -rw-r--r-- root/root 2069 2009-06-25 10:10 ./usr/share/man/man1/h5fromtxt.1.gz drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/share/h5utils/ drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/share/h5utils/colormaps/ -rw-r--r-- root/root 156 2009-06-25 10:10 ./usr/share/h5utils/colormaps/autumn -rw-r--r-- root/root 57 2009-06-25 10:10 ./usr/share/h5utils/colormaps/bluered -rw-r--r-- root/root 3469 2009-06-25 10:10 ./usr/share/h5utils/colormaps/bone -rw-r--r-- root/root 3438 2009-06-25 10:10 ./usr/share/h5utils/colormaps/colorcube -rw-r--r-- root/root 158 2009-06-25 10:10 ./usr/share/h5utils/colormaps/cool -rw-r--r-- root/root 3455 2009-06-25 10:10 ./usr/share/h5utils/colormaps/copper -rw-r--r-- root/root 3458 2009-06-25 10:10 ./usr/share/h5utils/colormaps/flag -rw-r--r-- root/root 59 2009-06-25 10:10 ./usr/share/h5utils/colormaps/gray -rw-r--r-- root/root 55 2009-06-25 10:10 ./usr/share/h5utils/colormaps/green -rw-r--r-- root/root 3441 2009-06-25 10:10 ./usr/share/h5utils/colormaps/hot -rw-r--r-- root/root 3481 2009-06-25 10:10 ./usr/share/h5utils/colormaps/hsv -rw-r--r-- root/root 902 2009-06-25 10:10 ./usr/share/h5utils/colormaps/jet -rw-r--r-- root/root 3426 2009-06-25 10:10 ./usr/share/h5utils/colormaps/lines -rw-r--r-- root/root 3459 2009-06-25 10:10 ./usr/share/h5utils/colormaps/pink -rw-r--r-- root/root 926 2009-06-25 10:10 ./usr/share/h5utils/colormaps/prism -rw-r--r-- root/root 889 2009-06-25 10:10 ./usr/share/h5utils/colormaps/spring -rw-r--r-- root/root 887 2009-06-25 10:10 ./usr/share/h5utils/colormaps/summer -rw-r--r-- root/root 887 2009-06-25 10:10 ./usr/share/h5utils/colormaps/vga -rw-r--r-- root/root 156 2009-06-25 10:10 ./usr/share/h5utils/colormaps/winter -rw-r--r-- root/root 90 2009-06-25 10:10 ./usr/share/h5utils/colormaps/yarg -rw-r--r-- root/root 57 2009-06-25 10:10 ./usr/share/h5utils/colormaps/yellow -rw-r--r-- root/root 761 2009-06-25 10:10 ./usr/share/h5utils/colormaps/dkbluered drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/share/doc/ drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/share/doc/h5utils/ -rw-r--r-- root/root 178 2009-06-25 10:10 ./usr/share/doc/h5utils/README.Debian -rw-r--r-- root/root 2138 2009-06-25 10:10 ./usr/share/doc/h5utils/copyright -rw-r--r-- root/root 6323 2009-06-12 22:34 ./usr/share/doc/h5utils/changelog.gz -rw-r--r-- root/root 2601 2009-06-12 22:26 ./usr/share/doc/h5utils/NEWS.gz -rw-r--r-- root/root 2114 2009-06-25 10:10 ./usr/share/doc/h5utils/changelog.Debian.gz drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/lib/ drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/lib/octave/ drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/lib/octave/3.0.5/ drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/lib/octave/3.0.5/oct/ drwxr-xr-x root/root 0 2009-06-25 10:10 ./usr/lib/octave/3.0.5/oct/x86_64-pc-linux-gnu/ -rw-r--r-- root/root 598465 2009-06-25 10:10 ./usr/lib/octave/3.0.5/oct/x86_64-pc-linux-gnu/h5read.oct h5utils_1.12-1_amd64.changes: Format: 1.8 Date: Wed, 24 Jun 2009 15:25:38 +0200 Source: h5utils Binary: h5utils Architecture: amd64 Version: 1.12-1 Distribution: karmic Urgency: low Maintainer: Ubuntu/amd64 Build Daemon Changed-By: Francesco Paolo Lovergine Description: h5utils - HDF5 files visualization tools Closes: 491579 516453 525176 532934 Changes: h5utils (1.12-1) unstable; urgency=low . * New upstream release. (closes: #532934, #525176, #491579) * Added quilt build-dep to provide patches to upstream stuff. * Partially ack NMU 1.10-7.1 to fix obsolete octave dependency and depend on octave-config instead of running octave at building time. Autotools stuff is properly regenerated to updated in respect with the new configure.ac. Resulting quilt patch is patches/octave.diff. (closes: #516453) * Added Homepage and Vcs-* fields in debian/control. * Policy bumped to 3.8.2. * [Lintian] debian-rules-ignores-make-clean-error fixed. Checksums-Sha1: ada5b192ed442c72fdf62993c08ed0ad5f7ada62 247342 h5utils_1.12-1_amd64.deb Checksums-Sha256: 59e9f0615c84acfad8ec4d66cc8ada4a0b7b35d301c047a05a2db1d223b3cde0 247342 h5utils_1.12-1_amd64.deb Files: e6fd38dbe7239ea2504ca7ed0e703784 247342 science optional h5utils_1.12-1_amd64.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/h5utils-1.12 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --root=/home/buildd/build-1093057-2369693/chroot-autobuild --purge groff-base readline-common gettext file zlib1g-dev openssl libfftw3-dev octave3.0-common libcroco3 gfortran octave3.0 libmatheval1-dev liblapack-dev libqhull5 libjpeg62 libssl0.9.8 liblapack3gf libldap-2.4-2 libhdf5-serial-1.6.6-0 diffstat html2text libgcrypt11 libjpeg62-dev debhelper libkeyutils1 libidn11 libhdf5-serial-dev libncurses5-dev libgnutls26 libmagic1 libblas3gf libcolamd-3.2.0 libgfortran3 libsasl2-modules bsdmainutils libfftw3-3 libglib2.0-0 octave3.0-headers libsasl2-2 libtasn1-3 libhdf4g po-debconf libk5crypto3 quilt libxml2 hdf5-tools libglpk0 libcurl3-gnutls libkrb5support0 libpng12-0 man-db texinfo libsuitesparse-3.2.0 intltool-debian libgpg-error0 ca-certificates gettext-base libpng12-dev gfortran-4.4 libreadline5 libreadline5-dev libltdl7 libgssapi-krb5-2 libkrb5-3 libhdf4g-dev libblas-dev libmatheval1 (Reading database ... 14271 files and directories currently installed.) Removing libmatheval1-dev ... Removing debhelper ... Removing octave3.0-headers ... Removing po-debconf ... Removing quilt ... Purging configuration files for quilt ... Removing hdf5-tools ... Removing man-db ... Purging configuration files for man-db ... Removing catpages as well as /var/cache/man hierarchy. dpkg - warning: while removing man-db, directory `/usr/share/doc/man-db/examples' not empty so not removed. dpkg - warning: while removing man-db, directory `/usr/share/doc/man-db' not empty so not removed. dpkg - warning: while removing man-db, directory `/usr/share/man/id/man5' not empty so not removed. dpkg - warning: while removing man-db, directory `/usr/share/man-db' not empty so not removed. dpkg - warning: while removing man-db, directory `/usr/share/bug/man-db' not empty so not removed. dpkg - warning: while removing man-db, directory `/usr/lib/man-db' not empty so not removed. Removing intltool-debian ... Removing libpng12-dev ... Removing libreadline5-dev ... 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Processing triggers for libc6 ... ldconfig deferred processing now taking place ****************************************************************************** Finished at 20090625-1010 Build needed 00:00:23, 5196k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '1093057-2369693'] Scanning for processes to kill in build 1093057-2369693... Scanning for processes to kill in build /home/buildd/build-1093057-2369693/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '1093057-2369693'] Unmounting chroot for build 1093057-2369693... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '1093057-2369693'] Removing build 1093057-2369693