https://launchpad.net/ubuntu/+source/hilive/2.0a-3build4/+build/27576556 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos03-arm64-018 5.4.0-169-generic #187-Ubuntu SMP Thu Nov 23 14:53:38 UTC 2023 aarch64 Buildd toolchain package versions: launchpad-buildd_235~645~ubuntu20.04.1 python3-lpbuildd_235~645~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.11 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1.1. Syncing the system clock with the buildd NTP service... 19 Dec 15:57:34 ntpdate[1854]: adjust time server 10.211.37.1 offset 0.000102 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27576556 --image-type chroot /home/buildd/filecache-default/59612f0fc5bae33f6226b6e60c2e882b82c04bd0 Creating target for build PACKAGEBUILD-27576556 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27576556 Starting target for build PACKAGEBUILD-27576556 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27576556 'deb http://ftpmaster.internal/ubuntu noble main universe' 'deb http://ftpmaster.internal/ubuntu noble-security main universe' 'deb http://ftpmaster.internal/ubuntu noble-updates main universe' 'deb http://ftpmaster.internal/ubuntu noble-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-27576556 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27576556 Updating target for build PACKAGEBUILD-27576556 Get:1 http://ftpmaster.internal/ubuntu noble InRelease [240 kB] Get:2 http://ftpmaster.internal/ubuntu noble-security InRelease [74.9 kB] Get:3 http://ftpmaster.internal/ubuntu noble-updates InRelease [74.9 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease [102 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main armhf Packages [1335 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main Translation-en [515 kB] Get:7 http://ftpmaster.internal/ubuntu noble/universe armhf Packages [14.5 MB] Get:8 http://ftpmaster.internal/ubuntu noble/universe Translation-en [6031 kB] Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main armhf Packages [88.3 kB] Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main Translation-en [44.9 kB] Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf Packages [1034 kB] Get:12 http://ftpmaster.internal/ubuntu noble-proposed/universe Translation-en [325 kB] Fetched 24.4 MB in 4s (5749 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libunistring2 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: libunistring5 The following packages will be upgraded: apt apt-utils base-files base-passwd bash bash-completion binutils binutils-arm-linux-gnueabihf binutils-common bsdextrautils bsdutils coreutils cpp cpp-13 debianutils diffutils dpkg dpkg-dev fakeroot g++ g++-13 gcc gcc-13 gcc-13-base grep init init-system-helpers krb5-locales libapparmor1 libapt-pkg6.0 libargon2-1 libasan8 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcc1-0 libcryptsetup12 libctf-nobfd0 libctf0 libdb5.3 libdebconfclient0 libdpkg-perl libfakeroot libfdisk1 libffi8 libgcc-13-dev libgcc-s1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error-l10n libgpg-error0 libgssapi-krb5-2 libidn2-0 libk5crypto3 libkmod2 libkrb5-3 libkrb5support0 liblzma5 libmount1 libncursesw6 libnsl-dev libnsl2 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libperl5.36 libpng16-16 libproc2-0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsframe1 libsmartcols1 libsqlite3-0 libssl3 libstdc++-13-dev libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libubsan1 libudev1 libuuid1 libxxhash0 libzstd1 linux-libc-dev login lto-disabled-list mawk mount ncurses-base ncurses-bin openssl optipng passwd perl perl-base perl-modules-5.36 pinentry-curses procps readline-common systemd systemd-dev systemd-sysv sysvinit-utils tar ubuntu-keyring util-linux uuid-runtime xz-utils zlib1g 129 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 89.8 MB of archives. After this operation, 751 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu noble/main armhf libnsl-dev armhf 1.3.0-3 [65.8 kB] Get:2 http://ftpmaster.internal/ubuntu noble/main armhf libc6-dev armhf 2.38-3ubuntu1 [1347 kB] Get:3 http://ftpmaster.internal/ubuntu noble/main armhf libc-dev-bin armhf 2.38-3ubuntu1 [18.9 kB] Get:4 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc-common all 1.3.4+ds-1 [7920 B] Get:5 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc-dev armhf 1.3.4+ds-1 [184 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main armhf libgssapi-krb5-2 armhf 1.20.1-5build1 [118 kB] Get:7 http://ftpmaster.internal/ubuntu noble/main armhf libkrb5-3 armhf 1.20.1-5build1 [320 kB] Get:8 http://ftpmaster.internal/ubuntu noble/main armhf libk5crypto3 armhf 1.20.1-5build1 [78.6 kB] Get:9 http://ftpmaster.internal/ubuntu noble/main armhf libkrb5support0 armhf 1.20.1-5build1 [31.3 kB] Get:10 http://ftpmaster.internal/ubuntu noble/main armhf libssl3 armhf 3.0.10-1ubuntu3 [1560 kB] Get:11 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc3 armhf 1.3.4+ds-1 [72.0 kB] Get:12 http://ftpmaster.internal/ubuntu noble/main armhf libnsl2 armhf 1.3.0-3 [35.9 kB] Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main armhf linux-libc-dev armhf 6.6.0-14.14 [1539 kB] Get:14 http://ftpmaster.internal/ubuntu noble/main armhf libcc1-0 armhf 13.2.0-9ubuntu1 [43.8 kB] Get:15 http://ftpmaster.internal/ubuntu noble/main armhf libctf0 armhf 2.41.50.20231214-1ubuntu1 [72.5 kB] Get:16 http://ftpmaster.internal/ubuntu noble/main armhf libctf-nobfd0 armhf 2.41.50.20231214-1ubuntu1 [75.1 kB] Get:17 http://ftpmaster.internal/ubuntu noble/main armhf binutils-arm-linux-gnueabihf armhf 2.41.50.20231214-1ubuntu1 [2871 kB] Get:18 http://ftpmaster.internal/ubuntu noble/main armhf libbinutils armhf 2.41.50.20231214-1ubuntu1 [403 kB] Get:19 http://ftpmaster.internal/ubuntu noble/main armhf binutils-common armhf 2.41.50.20231214-1ubuntu1 [230 kB] Get:20 http://ftpmaster.internal/ubuntu noble/main armhf binutils armhf 2.41.50.20231214-1ubuntu1 [3092 B] Get:21 http://ftpmaster.internal/ubuntu noble/main armhf gcc-13-base armhf 13.2.0-9ubuntu1 [45.2 kB] Get:22 http://ftpmaster.internal/ubuntu noble/main armhf libgcc-s1 armhf 13.2.0-9ubuntu1 [41.4 kB] Get:23 http://ftpmaster.internal/ubuntu noble/main armhf libgomp1 armhf 13.2.0-9ubuntu1 [120 kB] Get:24 http://ftpmaster.internal/ubuntu noble/main armhf libatomic1 armhf 13.2.0-9ubuntu1 [7794 B] Get:25 http://ftpmaster.internal/ubuntu noble/main armhf libasan8 armhf 13.2.0-9ubuntu1 [2749 kB] Get:26 http://ftpmaster.internal/ubuntu noble/main armhf libubsan1 armhf 13.2.0-9ubuntu1 [1072 kB] Get:27 http://ftpmaster.internal/ubuntu noble/main armhf g++-13 armhf 13.2.0-9ubuntu1 [9442 kB] Get:28 http://ftpmaster.internal/ubuntu noble/main armhf libstdc++-13-dev armhf 13.2.0-9ubuntu1 [2398 kB] Get:29 http://ftpmaster.internal/ubuntu noble/main armhf libgcc-13-dev armhf 13.2.0-9ubuntu1 [901 kB] Get:30 http://ftpmaster.internal/ubuntu noble/main armhf gcc-13 armhf 13.2.0-9ubuntu1 [16.5 MB] Get:31 http://ftpmaster.internal/ubuntu noble/main armhf cpp-13 armhf 13.2.0-9ubuntu1 [8249 kB] Get:32 http://ftpmaster.internal/ubuntu noble/main armhf libstdc++6 armhf 13.2.0-9ubuntu1 [698 kB] Get:33 http://ftpmaster.internal/ubuntu noble-proposed/main armhf zlib1g armhf 1:1.3.dfsg-3ubuntu1 [50.6 kB] Get:34 http://ftpmaster.internal/ubuntu noble/main armhf libsframe1 armhf 2.41.50.20231214-1ubuntu1 [11.8 kB] Get:35 http://ftpmaster.internal/ubuntu noble/main armhf libzstd1 armhf 1.5.5+dfsg2-2 [265 kB] Get:36 http://ftpmaster.internal/ubuntu noble/main armhf libc6 armhf 2.38-3ubuntu1 [2818 kB] Get:37 http://ftpmaster.internal/ubuntu noble/main armhf base-files armhf 13ubuntu5 [73.3 kB] Get:38 http://ftpmaster.internal/ubuntu noble/main armhf debianutils armhf 5.14 [88.0 kB] Get:39 http://ftpmaster.internal/ubuntu noble/main armhf bash armhf 5.2.21-2ubuntu1 [673 kB] Get:40 http://ftpmaster.internal/ubuntu noble/main armhf bsdutils armhf 1:2.39.2-6ubuntu1 [99.5 kB] Get:41 http://ftpmaster.internal/ubuntu noble/main armhf coreutils armhf 9.4-2ubuntu1 [1309 kB] Get:42 http://ftpmaster.internal/ubuntu noble/main armhf diffutils armhf 1:3.10-1 [167 kB] Get:43 http://ftpmaster.internal/ubuntu noble/main armhf liblzma5 armhf 5.4.5-0.1 [111 kB] Get:44 http://ftpmaster.internal/ubuntu noble/main armhf libapparmor1 armhf 4.0.0~alpha2-0ubuntu7 [43.8 kB] Get:45 http://ftpmaster.internal/ubuntu noble/main armhf libaudit-common all 1:3.1.2-1 [5512 B] Get:46 http://ftpmaster.internal/ubuntu noble/main armhf libcap-ng0 armhf 0.8.3-3 [13.6 kB] Get:47 http://ftpmaster.internal/ubuntu noble/main armhf libaudit1 armhf 1:3.1.2-1 [44.2 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main armhf libblkid1 armhf 2.39.2-6ubuntu1 [159 kB] Get:49 http://ftpmaster.internal/ubuntu noble/main armhf libkmod2 armhf 30+20230601-2ubuntu1 [43.9 kB] Get:50 http://ftpmaster.internal/ubuntu noble/main armhf libpcre2-8-0 armhf 10.42-4ubuntu1 [198 kB] Get:51 http://ftpmaster.internal/ubuntu noble/main armhf libselinux1 armhf 3.5-1build2 [69.6 kB] Get:52 http://ftpmaster.internal/ubuntu noble/main armhf libmount1 armhf 2.39.2-6ubuntu1 [171 kB] Get:53 http://ftpmaster.internal/ubuntu noble/main armhf libpam0g armhf 1.5.2-9.1ubuntu1 [59.9 kB] Get:54 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libseccomp2 armhf 2.5.4-2ubuntu1 [48.9 kB] Get:55 http://ftpmaster.internal/ubuntu noble-proposed/main armhf systemd-sysv armhf 255-1ubuntu1 [11.7 kB] Get:56 http://ftpmaster.internal/ubuntu noble-proposed/main armhf systemd-dev all 255-1ubuntu1 [98.5 kB] Get:57 http://ftpmaster.internal/ubuntu noble-proposed/main armhf systemd armhf 255-1ubuntu1 [3513 kB] Get:58 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsystemd-shared armhf 255-1ubuntu1 [2003 kB] Get:59 http://ftpmaster.internal/ubuntu noble/main armhf libargon2-1 armhf 0~20190702+dfsg-4 [22.3 kB] Get:60 http://ftpmaster.internal/ubuntu noble/main armhf libuuid1 armhf 2.39.2-6ubuntu1 [33.4 kB] Get:61 http://ftpmaster.internal/ubuntu noble/main armhf libcryptsetup12 armhf 2:2.6.1-5ubuntu1 [217 kB] Get:62 http://ftpmaster.internal/ubuntu noble/main armhf libfdisk1 armhf 2.39.2-6ubuntu1 [195 kB] Get:63 http://ftpmaster.internal/ubuntu noble/main armhf mount armhf 2.39.2-6ubuntu1 [132 kB] Get:64 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsystemd0 armhf 255-1ubuntu1 [401 kB] Get:65 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libudev1 armhf 255-1ubuntu1 [161 kB] Get:66 http://ftpmaster.internal/ubuntu noble/main armhf libxxhash0 armhf 0.8.2-2 [31.3 kB] Get:67 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libapt-pkg6.0 armhf 2.7.7 [962 kB] Get:68 http://ftpmaster.internal/ubuntu noble/main armhf tar armhf 1.34+dfsg-1.2ubuntu2 [269 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main armhf dpkg armhf 1.22.1ubuntu5 [1342 kB] Get:70 http://ftpmaster.internal/ubuntu noble/main armhf grep armhf 3.11-3 [157 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main armhf login armhf 1:4.13+dfsg1-3ubuntu1 [200 kB] Get:72 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-bin armhf 6.4+20231209-1 [177 kB] Get:73 http://ftpmaster.internal/ubuntu noble/main armhf libperl5.36 armhf 5.36.0-10ubuntu1 [4019 kB] Get:74 http://ftpmaster.internal/ubuntu noble/main armhf perl armhf 5.36.0-10ubuntu1 [235 kB] Get:75 http://ftpmaster.internal/ubuntu noble/main armhf perl-base armhf 5.36.0-10ubuntu1 [1617 kB] Get:76 http://ftpmaster.internal/ubuntu noble/main armhf perl-modules-5.36 all 5.36.0-10ubuntu1 [2984 kB] Get:77 http://ftpmaster.internal/ubuntu noble/main armhf libdb5.3 armhf 5.3.28+dfsg2-4 [652 kB] Get:78 http://ftpmaster.internal/ubuntu noble/main armhf libgdbm6 armhf 1.23-5 [29.8 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main armhf libgdbm-compat4 armhf 1.23-5 [5970 B] Get:80 http://ftpmaster.internal/ubuntu noble/main armhf util-linux armhf 2.39.2-6ubuntu1 [1211 kB] Get:81 http://ftpmaster.internal/ubuntu noble/main armhf libdebconfclient0 armhf 0.271ubuntu1 [10.8 kB] Get:82 http://ftpmaster.internal/ubuntu noble/main armhf base-passwd armhf 3.6.3 [51.0 kB] Get:83 http://ftpmaster.internal/ubuntu noble-proposed/main armhf init-system-helpers all 1.66ubuntu1 [39.4 kB] Get:84 http://ftpmaster.internal/ubuntu noble/main armhf libc-bin armhf 2.38-3ubuntu1 [532 kB] Get:85 http://ftpmaster.internal/ubuntu noble/main armhf ncurses-base all 6.4+20231209-1 [25.2 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main armhf sysvinit-utils armhf 3.08-3ubuntu1 [33.4 kB] Get:87 http://ftpmaster.internal/ubuntu noble-proposed/main armhf apt armhf 2.7.7 [1364 kB] Get:88 http://ftpmaster.internal/ubuntu noble-proposed/main armhf apt-utils armhf 2.7.7 [212 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main armhf ubuntu-keyring all 2023.11.28.1 [11.1 kB] Get:90 http://ftpmaster.internal/ubuntu noble/main armhf libunistring5 armhf 1.1-2 [512 kB] Get:91 http://ftpmaster.internal/ubuntu noble/main armhf libidn2-0 armhf 2.3.4-1build1 [94.2 kB] Get:92 http://ftpmaster.internal/ubuntu noble/main armhf libffi8 armhf 3.4.4-2 [20.8 kB] Get:93 http://ftpmaster.internal/ubuntu noble/main armhf libp11-kit0 armhf 0.25.3-2ubuntu2 [261 kB] Get:94 http://ftpmaster.internal/ubuntu noble/main armhf libgnutls30 armhf 3.8.1-4ubuntu6 [941 kB] Get:95 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules-bin armhf 1.5.2-9.1ubuntu1 [43.6 kB] Get:96 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules armhf 1.5.2-9.1ubuntu1 [265 kB] Get:97 http://ftpmaster.internal/ubuntu noble-proposed/main armhf init armhf 1.66ubuntu1 [6186 B] Get:98 http://ftpmaster.internal/ubuntu noble/main armhf libsmartcols1 armhf 2.39.2-6ubuntu1 [116 kB] Get:99 http://ftpmaster.internal/ubuntu noble/main armhf uuid-runtime armhf 2.39.2-6ubuntu1 [40.7 kB] Get:100 http://ftpmaster.internal/ubuntu noble/main armhf libgpg-error-l10n all 1.47-3build1 [8024 B] Get:101 http://ftpmaster.internal/ubuntu noble/main armhf libgpg-error0 armhf 1.47-3build1 [61.6 kB] Get:102 http://ftpmaster.internal/ubuntu noble/main armhf libpam-runtime all 1.5.2-9.1ubuntu1 [41.5 kB] Get:103 http://ftpmaster.internal/ubuntu noble/main armhf libsemanage-common all 3.5-1build1 [9982 B] Get:104 http://ftpmaster.internal/ubuntu noble/main armhf libsepol2 armhf 3.5-2 [262 kB] Get:105 http://ftpmaster.internal/ubuntu noble/main armhf libsemanage2 armhf 3.5-1build1 [84.1 kB] Get:106 http://ftpmaster.internal/ubuntu noble/main armhf libncursesw6 armhf 6.4+20231209-1 [118 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main armhf libtinfo6 armhf 6.4+20231209-1 [90.4 kB] Get:108 http://ftpmaster.internal/ubuntu noble/main armhf passwd armhf 1:4.13+dfsg1-3ubuntu1 [817 kB] Get:109 http://ftpmaster.internal/ubuntu noble/main armhf libproc2-0 armhf 2:4.0.4-2ubuntu1 [49.6 kB] Get:110 http://ftpmaster.internal/ubuntu noble/main armhf mawk armhf 1.3.4.20231126-1 [115 kB] Get:111 http://ftpmaster.internal/ubuntu noble/main armhf procps armhf 2:4.0.4-2ubuntu1 [699 kB] Get:112 http://ftpmaster.internal/ubuntu noble/main armhf krb5-locales all 1.20.1-5build1 [13.7 kB] Get:113 http://ftpmaster.internal/ubuntu noble/main armhf readline-common all 8.2-3 [56.2 kB] Get:114 http://ftpmaster.internal/ubuntu noble/main armhf libreadline8 armhf 8.2-3 [129 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main armhf libsqlite3-0 armhf 3.44.2-1 [593 kB] Get:116 http://ftpmaster.internal/ubuntu noble/main armhf openssl armhf 3.0.10-1ubuntu3 [1158 kB] Get:117 http://ftpmaster.internal/ubuntu noble/main armhf bash-completion all 1:2.11-8 [180 kB] Get:118 http://ftpmaster.internal/ubuntu noble/main armhf bsdextrautils armhf 2.39.2-6ubuntu1 [77.7 kB] Get:119 http://ftpmaster.internal/ubuntu noble/main armhf libpng16-16 armhf 1.6.40-2 [166 kB] Get:120 http://ftpmaster.internal/ubuntu noble/main armhf xz-utils armhf 5.4.5-0.1 [266 kB] Get:121 http://ftpmaster.internal/ubuntu noble/main armhf g++ armhf 4:13.2.0-2ubuntu1 [1108 B] Get:122 http://ftpmaster.internal/ubuntu noble/main armhf gcc armhf 4:13.2.0-2ubuntu1 [5196 B] Get:123 http://ftpmaster.internal/ubuntu noble/main armhf cpp armhf 4:13.2.0-2ubuntu1 [29.0 kB] Get:124 http://ftpmaster.internal/ubuntu noble/main armhf dpkg-dev all 1.22.1ubuntu5 [1147 kB] Get:125 http://ftpmaster.internal/ubuntu noble/main armhf libdpkg-perl all 1.22.1ubuntu5 [286 kB] Get:126 http://ftpmaster.internal/ubuntu noble/main armhf lto-disabled-list all 44 [12.4 kB] Get:127 http://ftpmaster.internal/ubuntu noble/main armhf libfakeroot armhf 1.32.2-1 [28.0 kB] Get:128 http://ftpmaster.internal/ubuntu noble/main armhf fakeroot armhf 1.32.2-1 [68.8 kB] Get:129 http://ftpmaster.internal/ubuntu noble/main armhf optipng armhf 0.7.7-3 [82.2 kB] Get:130 http://ftpmaster.internal/ubuntu noble/main armhf pinentry-curses armhf 1.2.1-3ubuntu1 [36.4 kB] Preconfiguring packages ... Fetched 89.8 MB in 4s (20.3 MB/s) (Reading database ... 13362 files and directories currently installed.) Preparing to unpack .../00-libnsl-dev_1.3.0-3_armhf.deb ... Unpacking libnsl-dev:armhf (1.3.0-3) over (1.3.0-2build2) ... Preparing to unpack .../01-libc6-dev_2.38-3ubuntu1_armhf.deb ... Unpacking libc6-dev:armhf (2.38-3ubuntu1) over (2.38-1ubuntu6) ... Preparing to unpack .../02-libc-dev-bin_2.38-3ubuntu1_armhf.deb ... Unpacking libc-dev-bin (2.38-3ubuntu1) over (2.38-1ubuntu6) ... Preparing to unpack .../03-libtirpc-common_1.3.4+ds-1_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1) over (1.3.3+ds-1) ... Preparing to unpack .../04-libtirpc-dev_1.3.4+ds-1_armhf.deb ... Unpacking libtirpc-dev:armhf (1.3.4+ds-1) over (1.3.3+ds-1) ... Preparing to unpack .../05-libgssapi-krb5-2_1.20.1-5build1_armhf.deb ... Unpacking libgssapi-krb5-2:armhf (1.20.1-5build1) over (1.20.1-3ubuntu1) ... Preparing to unpack .../06-libkrb5-3_1.20.1-5build1_armhf.deb ... 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Setting up g++-13 (13.2.0-9ubuntu1) ... Setting up g++ (4:13.2.0-2ubuntu1) ... Processing triggers for libc-bin (2.38-3ubuntu1) ... Processing triggers for debianutils (5.14) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-27576556 armhf noble-proposed -c chroot:build-PACKAGEBUILD-27576556 --arch=armhf --dist=noble-proposed --nolog hilive_2.0a-3build4.dsc Initiating build PACKAGEBUILD-27576556 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-169-generic #187-Ubuntu SMP Thu Nov 23 14:53:38 UTC 2023 armv7l sbuild (Debian sbuild) 0.79.0 (05 February 2020) on bos03-arm64-018.buildd +==============================================================================+ | hilive 2.0a-3build4 (armhf) Tue, 19 Dec 2023 15:58:03 +0000 | +==============================================================================+ Package: hilive Version: 2.0a-3build4 Source Version: 2.0a-3build4 Distribution: noble-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-27576556/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/hilive-qWhyBF/resolver-SNDR3X' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- hilive_2.0a-3build4.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/hilive-qWhyBF/hilive-2.0a' with '<>' I: NOTICE: Log filtering will replace 'build/hilive-qWhyBF' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), cmake, libboost-system-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-program-options-dev, libhts-dev, libseqan2-dev, zlib1g-dev, liblz4-dev, chrpath, markdown, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 12), cmake, libboost-system-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-program-options-dev, libhts-dev, libseqan2-dev, zlib1g-dev, liblz4-dev, chrpath, markdown, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [446 B] Get:5 copy:/<>/apt_archive ./ Packages [527 B] Fetched 1930 B in 0s (133 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: apt-utils bash-completion ca-certificates debconf-i18n krb5-locales libgpg-error-l10n libgpm2 libip4tc2 liblocale-gettext-perl libnss-nis libnss-nisplus libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libunistring2 openssl psmisc uuid-runtime Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev chrpath cmake cmake-data debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13 libboost-atomic1.83-dev libboost-atomic1.83.0 libboost-filesystem-dev libboost-filesystem1.83-dev libboost-filesystem1.83.0 libboost-iostreams-dev libboost-iostreams1.83-dev libboost-iostreams1.83.0 libboost-program-options-dev libboost-program-options1.83-dev libboost-program-options1.83.0 libboost-regex1.83-dev libboost-regex1.83.0 libboost-system-dev libboost-system1.83-dev libboost-system1.83.0 libboost1.83-dev libbrotli1 libcurl3-gnutls libcurl4 libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0 libdw1 libelf1 libexpat1 libfile-stripnondeterminism-perl libhts-dev libhts3 libhtscodecs2 libicu-dev libicu74 libjsoncpp25 libldap2 liblz4-dev liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libseqan2-dev libssh-4 libsub-override-perl libtool libuchardet0 libuv1 libxml2 m4 man-db markdown po-debconf zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc cmake-doc cmake-format elpa-cmake-mode ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libboost1.83-doc libboost-chrono1.83-dev libboost-container1.83-dev libboost-context1.83-dev libboost-contract1.83-dev libboost-coroutine1.83-dev libboost-date-time1.83-dev libboost-exception1.83-dev libboost-fiber1.83-dev libboost-graph1.83-dev libboost-graph-parallel1.83-dev libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev libboost-mpi1.83-dev libboost-mpi-python1.83-dev libboost-numpy1.83-dev libboost-python1.83-dev libboost-random1.83-dev libboost-serialization1.83-dev libboost-stacktrace1.83-dev libboost-test1.83-dev libboost-thread1.83-dev libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.83-dev libcurl4-doc libgnutls28-dev libidn-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev pkg-config icu-doc liblzma-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libldap-common publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev chrpath cmake cmake-data debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13 libboost-atomic1.83-dev libboost-atomic1.83.0 libboost-filesystem-dev libboost-filesystem1.83-dev libboost-filesystem1.83.0 libboost-iostreams-dev libboost-iostreams1.83-dev libboost-iostreams1.83.0 libboost-program-options-dev libboost-program-options1.83-dev libboost-program-options1.83.0 libboost-regex1.83-dev libboost-regex1.83.0 libboost-system-dev libboost-system1.83-dev libboost-system1.83.0 libboost1.83-dev libbrotli1 libcurl3-gnutls libcurl4 libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0 libdw1 libelf1 libexpat1 libfile-stripnondeterminism-perl libhts-dev libhts3 libhtscodecs2 libicu-dev libicu74 libjsoncpp25 libldap2 liblz4-dev liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libseqan2-dev libssh-4 libsub-override-perl libtool libuchardet0 libuv1 libxml2 m4 man-db markdown po-debconf sbuild-build-depends-main-dummy zlib1g-dev 0 upgraded, 79 newly installed, 0 to remove and 0 not upgraded. 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armhf chrpath armhf 0.16-2 [11.9 kB] Get:23 http://ftpmaster.internal/ubuntu noble/main armhf libarchive13 armhf 3.7.2-1ubuntu2 [327 kB] Get:24 http://ftpmaster.internal/ubuntu noble/main armhf libbrotli1 armhf 1.1.0-2 [318 kB] Get:25 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-4 [19.0 kB] Get:26 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-2 armhf 2.1.28+dfsg1-4 [49.8 kB] Get:27 http://ftpmaster.internal/ubuntu noble/main armhf libldap2 armhf 2.6.6+dfsg-1~exp1ubuntu1 [170 kB] Get:28 http://ftpmaster.internal/ubuntu noble/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2build4 [52.8 kB] Get:29 http://ftpmaster.internal/ubuntu noble/main armhf libssh-4 armhf 0.10.5-3ubuntu1 [166 kB] Get:30 http://ftpmaster.internal/ubuntu noble/main armhf libcurl4 armhf 8.4.0-2ubuntu1 [294 kB] Get:31 http://ftpmaster.internal/ubuntu noble/main armhf libjsoncpp25 armhf 1.9.5-6 [72.5 kB] Get:32 http://ftpmaster.internal/ubuntu noble/main armhf 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[235 kB] Get:43 http://ftpmaster.internal/ubuntu noble/main armhf debugedit armhf 1:5.0-5 [42.8 kB] Get:44 http://ftpmaster.internal/ubuntu noble/main armhf dwz armhf 0.15-1 [109 kB] Get:45 http://ftpmaster.internal/ubuntu noble/main armhf gettext armhf 0.21-14 [799 kB] Get:46 http://ftpmaster.internal/ubuntu noble/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:47 http://ftpmaster.internal/ubuntu noble/main armhf po-debconf all 1.0.21+nmu1 [233 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main armhf debhelper all 13.11.8ubuntu1 [940 kB] Get:49 http://ftpmaster.internal/ubuntu noble-proposed/main armhf icu-devtools armhf 74.2-1ubuntu1 [201 kB] Get:50 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libboost1.83-dev armhf 1.83.0-1ubuntu3 [10.7 MB] Get:51 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libboost-atomic1.83.0 armhf 1.83.0-1ubuntu3 [238 kB] Get:52 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libboost-atomic1.83-dev armhf 1.83.0-1ubuntu3 [234 kB] Get:53 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libboost-filesystem1.83.0 armhf 1.83.0-1ubuntu3 [280 kB] Get:54 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libboost-system1.83.0 armhf 1.83.0-1ubuntu3 [236 kB] Get:55 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libboost-system1.83-dev armhf 1.83.0-1ubuntu3 [231 kB] Get:56 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libboost-filesystem1.83-dev armhf 1.83.0-1ubuntu3 [291 kB] Get:57 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libboost-filesystem-dev armhf 1.83.0.1ubuntu2 [4094 B] Get:58 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libboost-regex1.83.0 armhf 1.83.0-1ubuntu3 [320 kB] Get:59 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libicu-dev armhf 74.2-1ubuntu1 [11.6 MB] Get:60 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libboost-regex1.83-dev armhf 1.83.0-1ubuntu3 [349 kB] Get:61 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libboost-iostreams1.83.0 armhf 1.83.0-1ubuntu3 [256 kB] Get:62 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libboost-iostreams1.83-dev armhf 1.83.0-1ubuntu3 [265 kB] Get:63 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libboost-iostreams-dev armhf 1.83.0.1ubuntu2 [4046 B] Get:64 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libboost-program-options1.83.0 armhf 1.83.0-1ubuntu3 [344 kB] Get:65 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libboost-program-options1.83-dev armhf 1.83.0-1ubuntu3 [389 kB] Get:66 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libboost-program-options-dev armhf 1.83.0.1ubuntu2 [4084 B] Get:67 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libboost-system-dev armhf 1.83.0.1ubuntu2 [4204 B] Get:68 http://ftpmaster.internal/ubuntu noble/main armhf libcurl3-gnutls armhf 8.4.0-2ubuntu1 [289 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main armhf libcurl4-gnutls-dev armhf 8.4.0-2ubuntu1 [407 kB] Get:70 http://ftpmaster.internal/ubuntu noble/main armhf libdeflate0 armhf 1.18-1 [40.7 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main armhf libdeflate-dev armhf 1.18-1 [47.6 kB] Get:72 http://ftpmaster.internal/ubuntu noble/universe armhf libhtscodecs2 armhf 1.6.0-1 [65.9 kB] Get:73 http://ftpmaster.internal/ubuntu noble/universe armhf libhts3 armhf 1.18+ds-1 [385 kB] Get:74 http://ftpmaster.internal/ubuntu noble/main armhf liblzma-dev armhf 5.4.5-0.1 [166 kB] Get:75 http://ftpmaster.internal/ubuntu noble-proposed/main armhf zlib1g-dev armhf 1:1.3.dfsg-3ubuntu1 [882 kB] Get:76 http://ftpmaster.internal/ubuntu noble/universe armhf libhts-dev armhf 1.18+ds-1 [1709 kB] Get:77 http://ftpmaster.internal/ubuntu noble/universe armhf libseqan2-dev all 2.4.0+dfsg-15ubuntu1 [1207 kB] Get:78 http://ftpmaster.internal/ubuntu noble/universe armhf markdown all 1.0.1-12 [17.8 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main armhf liblz4-dev armhf 1.9.4-1 [79.1 kB] Preconfiguring packages ... 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Unpacking liblz4-dev:armhf (1.9.4-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../78-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libhtscodecs2:armhf (1.6.0-1) ... Setting up libexpat1:armhf (2.5.0-2) ... Setting up libpipeline1:armhf (1.5.7-1) ... Setting up libboost-program-options1.83.0:armhf (1.83.0-1ubuntu3) ... Setting up libboost1.83-dev:armhf (1.83.0-1ubuntu3) ... Setting up libpsl5:armhf (0.21.2-1build1) ... Setting up libmagic-mgc (1:5.45-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libboost-regex1.83.0:armhf (1.83.0-1ubuntu3) ... Setting up libdebhelper-perl (13.11.8ubuntu1) ... Setting up libbrotli1:armhf (1.1.0-2) ... Setting up libboost-system1.83.0:armhf (1.83.0-1ubuntu3) ... Setting up libboost-program-options1.83-dev:armhf (1.83.0-1ubuntu3) ... Setting up libnghttp2-14:armhf (1.58.0-1) ... Setting up libmagic1:armhf (1:5.45-2) ... Setting up libdeflate0:armhf (1.18-1) ... Setting up gettext-base (0.21-14) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-2) ... Setting up libboost-filesystem1.83.0:armhf (1.83.0-1ubuntu3) ... Setting up libseqan2-dev (2.4.0+dfsg-15ubuntu1) ... Setting up libsasl2-modules-db:armhf (2.1.28+dfsg1-4) ... Setting up libboost-atomic1.83.0:armhf (1.83.0-1ubuntu3) ... Setting up autotools-dev (20220109.1) ... Setting up libuv1:armhf (1.46.0-2ubuntu1) ... Setting up libboost-program-options-dev:armhf (1.83.0.1ubuntu2) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2build4) ... Setting up libboost-iostreams1.83.0:armhf (1.83.0-1ubuntu3) ... Setting up autopoint (0.21-14) ... Setting up libjsoncpp25:armhf (1.9.5-6) ... Setting up liblz4-dev:armhf (1.9.4-1) ... Setting up libsasl2-2:armhf (2.1.28+dfsg1-4) ... Setting up libssh-4:armhf (0.10.5-3ubuntu1) ... Setting up libboost-atomic1.83-dev:armhf (1.83.0-1ubuntu3) ... Setting up autoconf (2.71-3) ... Setting up liblzma-dev:armhf (5.4.5-0.1) ... Setting up libicu74:armhf (74.2-1ubuntu1) ... Setting up zlib1g-dev:armhf (1:1.3.dfsg-3ubuntu1) ... Setting up librhash0:armhf (1.4.3-3) ... Setting up libuchardet0:armhf (0.0.8-1) ... Setting up libsub-override-perl (0.10-1) ... Setting up cmake-data (3.28.0-1) ... Setting up libboost-system1.83-dev:armhf (1.83.0-1ubuntu3) ... Setting up libdeflate-dev:armhf (1.18-1) ... Setting up libelf1:armhf (0.190-1) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3build3) ... Setting up libldap2:armhf (2.6.6+dfsg-1~exp1ubuntu1) ... Setting up chrpath (0.16-2) ... Setting up markdown (1.0.1-12) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libdw1:armhf (0.190-1) ... Setting up gettext (0.21-14) ... Setting up libtool (2.4.7-7) ... Setting up libarchive13:armhf (3.7.2-1ubuntu2) ... Setting up libboost-system-dev:armhf (1.83.0.1ubuntu2) ... Setting up libcurl3-gnutls:armhf (8.4.0-2ubuntu1) ... Setting up libboost-filesystem1.83-dev:armhf (1.83.0-1ubuntu3) ... Setting up libcurl4-gnutls-dev:armhf (8.4.0-2ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up icu-devtools (74.2-1ubuntu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up debugedit (1:5.0-5) ... Setting up libcurl4:armhf (8.4.0-2ubuntu1) ... Setting up libicu-dev:armhf (74.2-1ubuntu1) ... Setting up libboost-filesystem-dev:armhf (1.83.0.1ubuntu2) ... Setting up libhts3:armhf (1.18+ds-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhts-dev:armhf (1.18+ds-1) ... Setting up man-db (2.12.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /usr/lib/systemd/system/man-db.timer. Setting up libboost-regex1.83-dev:armhf (1.83.0-1ubuntu3) ... Setting up cmake (3.28.0-1) ... Setting up libboost-iostreams1.83-dev:armhf (1.83.0-1ubuntu3) ... Setting up debhelper (13.11.8ubuntu1) ... Setting up libboost-iostreams-dev:armhf (1.83.0.1ubuntu2) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.38-3ubuntu1) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-169-generic #187-Ubuntu SMP Thu Nov 23 14:53:38 UTC 2023 arm64 (armv7l) Toolchain package versions: binutils_2.41.50.20231214-1ubuntu1 dpkg-dev_1.22.1ubuntu5 g++-13_13.2.0-9ubuntu1 gcc-13_13.2.0-9ubuntu1 libc6-dev_2.38-3ubuntu1 libstdc++-13-dev_13.2.0-9ubuntu1 libstdc++6_13.2.0-9ubuntu1 linux-libc-dev_6.6.0-14.14 Package versions: adduser_3.137ubuntu1 advancecomp_2.5-1 apt_2.7.7 apt-utils_2.7.7 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13ubuntu5 base-passwd_3.6.3 bash_5.2.21-2ubuntu1 bash-completion_1:2.11-8 binutils_2.41.50.20231214-1ubuntu1 binutils-arm-linux-gnueabihf_2.41.50.20231214-1ubuntu1 binutils-common_2.41.50.20231214-1ubuntu1 bsdextrautils_2.39.2-6ubuntu1 bsdutils_1:2.39.2-6ubuntu1 build-essential_12.10ubuntu1 bzip2_1.0.8-5build1 ca-certificates_20230311ubuntu1 chrpath_0.16-2 cmake_3.28.0-1 cmake-data_3.28.0-1 coreutils_9.4-2ubuntu1 cpp_4:13.2.0-2ubuntu1 cpp-13_13.2.0-9ubuntu1 dash_0.5.12-6ubuntu1 debconf_1.5.82 debconf-i18n_1.5.82 debhelper_13.11.8ubuntu1 debianutils_5.14 debugedit_1:5.0-5 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.1ubuntu5 dpkg-dev_1.22.1ubuntu5 dwz_0.15-1 e2fsprogs_1.47.0-2ubuntu1 fakeroot_1.32.2-1 file_1:5.45-2 findutils_4.9.0-5 g++_4:13.2.0-2ubuntu1 g++-13_13.2.0-9ubuntu1 gcc_4:13.2.0-2ubuntu1 gcc-13_13.2.0-9ubuntu1 gcc-13-base_13.2.0-9ubuntu1 gettext_0.21-14 gettext-base_0.21-14 gpg_2.2.40-1.1ubuntu1 gpg-agent_2.2.40-1.1ubuntu1 gpgconf_2.2.40-1.1ubuntu1 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libdw1_0.190-1 libelf1_0.190-1 libexpat1_2.5.0-2 libext2fs2_1.47.0-2ubuntu1 libfakeroot_1.32.2-1 libfdisk1_2.39.2-6ubuntu1 libffi8_3.4.4-2 libfile-stripnondeterminism-perl_1.13.1-1 libgcc-13-dev_13.2.0-9ubuntu1 libgcc-s1_13.2.0-9ubuntu1 libgcrypt20_1.10.2-3ubuntu1 libgdbm-compat4_1.23-5 libgdbm6_1.23-5 libgmp10_2:6.3.0+dfsg-2ubuntu4 libgnutls30_3.8.1-4ubuntu6 libgomp1_13.2.0-9ubuntu1 libgpg-error-l10n_1.47-3build1 libgpg-error0_1.47-3build1 libgpm2_1.20.7-10build1 libgssapi-krb5-2_1.20.1-5build1 libhogweed6_3.9.1-2 libhts-dev_1.18+ds-1 libhts3_1.18+ds-1 libhtscodecs2_1.6.0-1 libicu-dev_74.2-1ubuntu1 libicu74_74.2-1ubuntu1 libidn2-0_2.3.4-1build1 libip4tc2_1.8.9-2ubuntu2 libisl23_0.26-3 libjansson4_2.14-2 libjson-c5_0.17-1 libjsoncpp25_1.9.5-6 libk5crypto3_1.20.1-5build1 libkeyutils1_1.6.3-2 libkmod2_30+20230601-2ubuntu1 libkrb5-3_1.20.1-5build1 libkrb5support0_1.20.1-5build1 libldap2_2.6.6+dfsg-1~exp1ubuntu1 liblocale-gettext-perl_1.07-6 liblockfile-bin_1.17-1build2 liblockfile1_1.17-1build2 liblz4-1_1.9.4-1 liblz4-dev_1.9.4-1 liblzma-dev_5.4.5-0.1 liblzma5_5.4.5-0.1 libmagic-mgc_1:5.45-2 libmagic1_1:5.45-2 libmd0_1.1.0-1 libmount1_2.39.2-6ubuntu1 libmpc3_1.3.1-1 libmpfr6_4.2.1-1 libncursesw6_6.4+20231209-1 libnettle8_3.9.1-2 libnghttp2-14_1.58.0-1 libnpth0_1.6-3build2 libnsl-dev_1.3.0-3 libnsl2_1.3.0-3 libnss-nis_3.1-0ubuntu6 libnss-nisplus_1.3-0ubuntu6 libp11-kit0_0.25.3-2ubuntu2 libpam-modules_1.5.2-9.1ubuntu1 libpam-modules-bin_1.5.2-9.1ubuntu1 libpam-runtime_1.5.2-9.1ubuntu1 libpam0g_1.5.2-9.1ubuntu1 libpcre2-8-0_10.42-4ubuntu1 libperl5.36_5.36.0-10ubuntu1 libpipeline1_1.5.7-1 libpng16-16_1.6.40-2 libproc2-0_2:4.0.4-2ubuntu1 libpsl5_0.21.2-1build1 libreadline8_8.2-3 librhash0_1.4.3-3 librtmp1_2.4+20151223.gitfa8646d.1-2build4 libsasl2-2_2.1.28+dfsg1-4 libsasl2-modules-db_2.1.28+dfsg1-4 libseccomp2_2.5.4-2ubuntu1 libselinux1_3.5-1build2 libsemanage-common_3.5-1build1 libsemanage2_3.5-1build1 libsepol2_3.5-2 libseqan2-dev_2.4.0+dfsg-15ubuntu1 libsframe1_2.41.50.20231214-1ubuntu1 libsmartcols1_2.39.2-6ubuntu1 libsqlite3-0_3.44.2-1 libss2_1.47.0-2ubuntu1 libssh-4_0.10.5-3ubuntu1 libssl3_3.0.10-1ubuntu3 libstdc++-13-dev_13.2.0-9ubuntu1 libstdc++6_13.2.0-9ubuntu1 libsub-override-perl_0.10-1 libsystemd-shared_255-1ubuntu1 libsystemd0_255-1ubuntu1 libtasn1-6_4.19.0-3 libtext-charwidth-perl_0.04-11 libtext-iconv-perl_1.7-8 libtext-wrapi18n-perl_0.06-10 libtinfo6_6.4+20231209-1 libtirpc-common_1.3.4+ds-1 libtirpc-dev_1.3.4+ds-1 libtirpc3_1.3.4+ds-1 libtool_2.4.7-7 libubsan1_13.2.0-9ubuntu1 libuchardet0_0.0.8-1 libudev1_255-1ubuntu1 libunistring2_1.0-2 libunistring5_1.1-2 libuuid1_2.39.2-6ubuntu1 libuv1_1.46.0-2ubuntu1 libxml2_2.9.14+dfsg-1.3build3 libxxhash0_0.8.2-2 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.6.0-14.14 lockfile-progs_0.1.19build1 login_1:4.13+dfsg1-3ubuntu1 logsave_1.47.0-2ubuntu1 lto-disabled-list_44 m4_1.4.19-4 make_4.3-4.1build1 man-db_2.12.0-1 markdown_1.0.1-12 mawk_1.3.4.20231126-1 mount_2.39.2-6ubuntu1 ncurses-base_6.4+20231209-1 ncurses-bin_6.4+20231209-1 openssl_3.0.10-1ubuntu3 optipng_0.7.7-3 passwd_1:4.13+dfsg1-3ubuntu1 patch_2.7.6-7build2 perl_5.36.0-10ubuntu1 perl-base_5.36.0-10ubuntu1 perl-modules-5.36_5.36.0-10ubuntu1 pinentry-curses_1.2.1-3ubuntu1 pkgbinarymangler_154 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3.1 procps_2:4.0.4-2ubuntu1 psmisc_23.6-1 readline-common_8.2-3 rpcsvc-proto_1.4.2-0ubuntu6 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 systemd_255-1ubuntu1 systemd-dev_255-1ubuntu1 systemd-sysv_255-1ubuntu1 sysvinit-utils_3.08-3ubuntu1 tar_1.34+dfsg-1.2ubuntu2 tzdata_2023c-9ubuntu1 ubuntu-keyring_2023.11.28.1 usrmerge_35ubuntu1 util-linux_2.39.2-6ubuntu1 uuid-runtime_2.39.2-6ubuntu1 xz-utils_5.4.5-0.1 zlib1g_1:1.3.dfsg-3ubuntu1 zlib1g-dev_1:1.3.dfsg-3ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: hilive Binary: hilive Architecture: any Version: 2.0a-3build4 Maintainer: Ubuntu Developers Uploaders: Andreas Tille Homepage: https://gitlab.com/rki_bioinformatics/HiLive2 Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/med-team/hilive Vcs-Git: https://salsa.debian.org/med-team/hilive.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), cmake, libboost-system-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-program-options-dev, libhts-dev, libseqan2-dev, zlib1g-dev, liblz4-dev, chrpath, markdown Package-List: hilive deb science optional arch=any Checksums-Sha1: 5705773f60eef87916fe3612b26df04ae3959d32 161788 hilive_2.0a.orig.tar.gz cf11eadfd1ebba08013b63a4a934c5be0a19a6f9 9212 hilive_2.0a-3build4.debian.tar.xz Checksums-Sha256: a60e7675988b35d9ebf9472ca7515b40f790654c04e67d35fabf069d91d73bf6 161788 hilive_2.0a.orig.tar.gz b2b014d003f7e6e3103e63f0850bda1e2051e518046de74a24f7ca95b99a6c82 9212 hilive_2.0a-3build4.debian.tar.xz Files: 8d393041a814071b4ac6a3db1f1f10e6 161788 hilive_2.0a.orig.tar.gz fa370722d4f87a4dd5f6ed895e87de25 9212 hilive_2.0a-3build4.debian.tar.xz Original-Maintainer: Debian Med Packaging Team -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEVovyKmYzfL/Jprm3LIPbyOm9DjcFAmWBsFEACgkQLIPbyOm9 DjdZUQ/6Ak5GS/inIm7TthEDYLreakW2TTTRDZpmD9qXdDEjoJQ/YCVa1rRpfCgL JEGG3O8fKovITe2iT//yTpOFYY9y5OnGJ+H74GBlZYbS1Fi0ZHVtwjFIrUimcjk0 X127pjGoRBvLzewXxlyZJb7hCqBFoUr0ox1TIRF2KSlIWNNcC5jsBC7hXVOvC4X6 X30hesYzxKPB+wahSyXY7btYpHAkzMS5KraUmyR1zE5Lr0lCu6+k2Tfm3qJa8umE 7ZBhvriGACnDnF0Sj7UMbV/jJhxnh21lgOfLxkeZ7aOvhOTua626IW+CcGkK1VJU I96/YVruDXbBIPgQ8cpOAJVOkhtD80eH3JvJfXl3Y/0qnBfLMkiIa3UviHXKpFm9 OGnfdIIBfDNrvGsU1GnDv3DKFL4dYV9EjesvMZVfuyedhxaCIxL57L7zZtv8Re4/ Sa6yG2KQYao758yK/NvR9hc7SfQY4glyy1OeGqxiDYTH/pO6ESTf+E2yitBSTMHW +jjF3M/wnGi8eQboXeGC9PluVj+MZ/bIInnVKSdTjNWRB0PXHTsf8pp0iQmo+anA 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DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-27576556 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-27576556 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-27576556 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package hilive dpkg-buildpackage: info: source version 2.0a-3build4 dpkg-buildpackage: info: source distribution noble dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- -DSEQAN_PATH=/usr/lib/seqan/ cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DSEQAN_PATH=/usr/lib/seqan/ .. -- The CXX compiler identification is GNU 13.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0/BoostConfig.cmake (found version "1.83.0") found components: system filesystem program_options iostreams -- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.3") -- Performing Test CXX14_BUILTIN -- Performing Test CXX14_BUILTIN - Success CMake Warning (dev) at /usr/share/cmake/seqan/seqan-config.cmake:218 (EXEC_PROGRAM): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. Call Stack (most recent call first): CMakeLists.txt:102 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Looking for C++ include execinfo.h -- Looking for C++ include execinfo.h - found -- Found Seqan: /usr/include (found version "2.4.0") -- Configuring done (0.6s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /<>/obj-arm-linux-gnueabihf make[1]: Leaving directory '/<>' dh_auto_build -a cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/<>/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<> -B/<>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabihf/CMakeFiles /<>/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-arm-linux-gnueabihf' make -f CMakeFiles/HiLiveLibs.dir/build.make CMakeFiles/HiLiveLibs.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/CMakeFiles/HiLiveLibs.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f CMakeFiles/HiLiveLibs.dir/build.make CMakeFiles/HiLiveLibs.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 6%] Building CXX object CMakeFiles/HiLiveLibs.dir/lib/tools_static.cpp.o [ 12%] Building CXX object CMakeFiles/HiLiveLibs.dir/lib/tools.cpp.o [ 25%] Building CXX object CMakeFiles/HiLiveLibs.dir/lib/alnread.cpp.o /usr/bin/c++ -DHiLive_VERSION_MAJOR=2 -DHiLive_VERSION_MINOR=0 -I/<>/obj-arm-linux-gnueabihf -I/<>/lib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -std=c++14 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_ZLIB=1 -MD -MT CMakeFiles/HiLiveLibs.dir/lib/tools.cpp.o -MF CMakeFiles/HiLiveLibs.dir/lib/tools.cpp.o.d -o CMakeFiles/HiLiveLibs.dir/lib/tools.cpp.o -c /<>/lib/tools.cpp [ 25%] Building CXX object CMakeFiles/HiLiveLibs.dir/lib/alnstream.cpp.o /usr/bin/c++ -DHiLive_VERSION_MAJOR=2 -DHiLive_VERSION_MINOR=0 -I/<>/obj-arm-linux-gnueabihf -I/<>/lib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -std=c++14 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_ZLIB=1 -MD -MT CMakeFiles/HiLiveLibs.dir/lib/tools_static.cpp.o -MF CMakeFiles/HiLiveLibs.dir/lib/tools_static.cpp.o.d -o CMakeFiles/HiLiveLibs.dir/lib/tools_static.cpp.o -c /<>/lib/tools_static.cpp /usr/bin/c++ -DHiLive_VERSION_MAJOR=2 -DHiLive_VERSION_MINOR=0 -I/<>/obj-arm-linux-gnueabihf -I/<>/lib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -std=c++14 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_ZLIB=1 -MD -MT CMakeFiles/HiLiveLibs.dir/lib/alnread.cpp.o -MF CMakeFiles/HiLiveLibs.dir/lib/alnread.cpp.o.d -o CMakeFiles/HiLiveLibs.dir/lib/alnread.cpp.o -c /<>/lib/alnread.cpp /usr/bin/c++ -DHiLive_VERSION_MAJOR=2 -DHiLive_VERSION_MINOR=0 -I/<>/obj-arm-linux-gnueabihf -I/<>/lib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -std=c++14 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_ZLIB=1 -MD -MT CMakeFiles/HiLiveLibs.dir/lib/alnstream.cpp.o -MF CMakeFiles/HiLiveLibs.dir/lib/alnstream.cpp.o.d -o CMakeFiles/HiLiveLibs.dir/lib/alnstream.cpp.o -c /<>/lib/alnstream.cpp In file included from /<>/lib/tools.h:11, from /<>/lib/tools.cpp:1: /<>/lib/tools_static.h: In function ‘void ltrim(std::string&)’: /<>/lib/tools_static.h:304:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 304 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /<>/lib/headers.h:1, from /<>/lib/tools_static.h:10: /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/lib/tools_static.h: In function ‘void rtrim(std::string&)’: /<>/lib/tools_static.h:314:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 314 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ In file included from /<>/lib/tools_static.cpp:1: /<>/lib/tools_static.h: In function ‘void ltrim(std::string&)’: /<>/lib/tools_static.h:304:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 304 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /<>/lib/headers.h:1, from /<>/lib/tools_static.h:10: /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/lib/tools_static.h: In function ‘void rtrim(std::string&)’: /<>/lib/tools_static.h:314:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 314 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ In file included from /<>/lib/tools.h:11, from /<>/lib/kindex.h:7, from /<>/lib/alnread.h:6, from /<>/lib/alnread.cpp:1: /<>/lib/tools_static.h: In function ‘void ltrim(std::string&)’: /<>/lib/tools_static.h:304:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 304 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /<>/lib/headers.h:1, from /<>/lib/alnread.h:4: /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/lib/tools_static.h: In function ‘void rtrim(std::string&)’: /<>/lib/tools_static.h:314:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 314 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ In file included from /<>/lib/tools.h:11, from /<>/lib/kindex.h:7, from /<>/lib/alnstream.h:7, from /<>/lib/alnstream.cpp:1: /<>/lib/tools_static.h: In function ‘void ltrim(std::string&)’: /<>/lib/tools_static.h:304:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 304 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /<>/lib/headers.h:1, from /<>/lib/alnstream.h:4: /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/lib/tools_static.h: In function ‘void rtrim(std::string&)’: /<>/lib/tools_static.h:314:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 314 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/lib/alnstream.cpp: In member function ‘uint64_t oAlnStream::lz4write(const char*, uint64_t)’: /<>/lib/alnstream.cpp:23:43: warning: ‘int LZ4_compress(const char*, char*, int)’ is deprecated: use LZ4_compress_default() instead [-Wdeprecated-declarations] 23 | uint32_t compressed_size = LZ4_compress (source, buf.data(), size); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/lib/headers.h:5: /usr/include/lz4.h:765:75: note: declared here 765 | LZ4_DEPRECATED("use LZ4_compress_default() instead") LZ4LIB_API int LZ4_compress (const char* src, char* dest, int srcSize); | ^~~~~~~~~~~~ [ 31%] Building CXX object CMakeFiles/HiLiveLibs.dir/lib/alnout.cpp.o /usr/bin/c++ -DHiLive_VERSION_MAJOR=2 -DHiLive_VERSION_MINOR=0 -I/<>/obj-arm-linux-gnueabihf -I/<>/lib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -std=c++14 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_ZLIB=1 -MD -MT CMakeFiles/HiLiveLibs.dir/lib/alnout.cpp.o -MF CMakeFiles/HiLiveLibs.dir/lib/alnout.cpp.o.d -o CMakeFiles/HiLiveLibs.dir/lib/alnout.cpp.o -c /<>/lib/alnout.cpp /<>/lib/alnstream.cpp: In member function ‘ReadAlignment* iAlnStream::get_alignment()’: /<>/lib/alnstream.cpp:359:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 359 | fread(buffer.data(),1,buf_size,fstream); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/lib/alnstream.cpp:389:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 389 | fread(buffer.data(),1,buf_size,fstream); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/HiLiveLibs.dir/lib/illumina_parsers.cpp.o /usr/bin/c++ -DHiLive_VERSION_MAJOR=2 -DHiLive_VERSION_MINOR=0 -I/<>/obj-arm-linux-gnueabihf -I/<>/lib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -std=c++14 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_ZLIB=1 -MD -MT CMakeFiles/HiLiveLibs.dir/lib/illumina_parsers.cpp.o -MF CMakeFiles/HiLiveLibs.dir/lib/illumina_parsers.cpp.o.d -o CMakeFiles/HiLiveLibs.dir/lib/illumina_parsers.cpp.o -c /<>/lib/illumina_parsers.cpp [ 43%] Building CXX object CMakeFiles/HiLiveLibs.dir/lib/kindex.cpp.o /usr/bin/c++ -DHiLive_VERSION_MAJOR=2 -DHiLive_VERSION_MINOR=0 -I/<>/obj-arm-linux-gnueabihf -I/<>/lib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -std=c++14 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_ZLIB=1 -MD -MT CMakeFiles/HiLiveLibs.dir/lib/kindex.cpp.o -MF CMakeFiles/HiLiveLibs.dir/lib/kindex.cpp.o.d -o CMakeFiles/HiLiveLibs.dir/lib/kindex.cpp.o -c /<>/lib/kindex.cpp In file included from /<>/lib/tools.h:11, from /<>/lib/kindex.h:7, from /<>/lib/alnout.h:7, from /<>/lib/alnout.cpp:1: /<>/lib/tools_static.h: In function ‘void ltrim(std::string&)’: /<>/lib/tools_static.h:304:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 304 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /<>/lib/headers.h:1, from /<>/lib/alnout.h:4: /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/lib/tools_static.h: In function ‘void rtrim(std::string&)’: /<>/lib/tools_static.h:314:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 314 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ In file included from /<>/lib/tools.h:11, from /<>/lib/illumina_parsers.h:6, from /<>/lib/illumina_parsers.cpp:1: /<>/lib/tools_static.h: In function ‘void ltrim(std::string&)’: /<>/lib/tools_static.h:304:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 304 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /<>/lib/headers.h:1, from /<>/lib/illumina_parsers.h:4: /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/lib/tools_static.h: In function ‘void rtrim(std::string&)’: /<>/lib/tools_static.h:314:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 314 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ In file included from /<>/lib/tools.h:11, from /<>/lib/kindex.h:7, from /<>/lib/kindex.cpp:1: /<>/lib/tools_static.h: In function ‘void ltrim(std::string&)’: /<>/lib/tools_static.h:304:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 304 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /<>/lib/headers.h:1, from /<>/lib/kindex.h:4: /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/lib/tools_static.h: In function ‘void rtrim(std::string&)’: /<>/lib/tools_static.h:314:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 314 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 50%] Building CXX object CMakeFiles/HiLiveLibs.dir/lib/parallel.cpp.o /usr/bin/c++ -DHiLive_VERSION_MAJOR=2 -DHiLive_VERSION_MINOR=0 -I/<>/obj-arm-linux-gnueabihf -I/<>/lib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -std=c++14 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_ZLIB=1 -MD -MT CMakeFiles/HiLiveLibs.dir/lib/parallel.cpp.o -MF CMakeFiles/HiLiveLibs.dir/lib/parallel.cpp.o.d -o CMakeFiles/HiLiveLibs.dir/lib/parallel.cpp.o -c /<>/lib/parallel.cpp In file included from /<>/lib/tools.h:11, from /<>/lib/parallel.h:6, from /<>/lib/parallel.cpp:1: /<>/lib/tools_static.h: In function ‘void ltrim(std::string&)’: /<>/lib/tools_static.h:304:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 304 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /<>/lib/headers.h:1, from /<>/lib/parallel.h:4: /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/lib/tools_static.h: In function ‘void rtrim(std::string&)’: /<>/lib/tools_static.h:314:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 314 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 56%] Building CXX object CMakeFiles/HiLiveLibs.dir/lib/argument_parser.cpp.o /usr/bin/c++ -DHiLive_VERSION_MAJOR=2 -DHiLive_VERSION_MINOR=0 -I/<>/obj-arm-linux-gnueabihf -I/<>/lib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -std=c++14 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_ZLIB=1 -MD -MT CMakeFiles/HiLiveLibs.dir/lib/argument_parser.cpp.o -MF CMakeFiles/HiLiveLibs.dir/lib/argument_parser.cpp.o.d -o CMakeFiles/HiLiveLibs.dir/lib/argument_parser.cpp.o -c /<>/lib/argument_parser.cpp In file included from /<>/lib/tools.h:11, from /<>/lib/parallel.h:6, from /<>/lib/argument_parser.h:5, from /<>/lib/argument_parser.cpp:1: /<>/lib/tools_static.h: In function ‘void ltrim(std::string&)’: /<>/lib/tools_static.h:304:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 304 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/boost/program_options/errors.hpp:12, from /usr/include/boost/program_options/options_description.hpp:12, from /usr/include/boost/program_options.hpp:15, from /<>/lib/argument_parser.h:1: /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/lib/tools_static.h: In function ‘void rtrim(std::string&)’: /<>/lib/tools_static.h:314:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 314 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 62%] Linking CXX static library libHiLiveLibs.a /usr/bin/cmake -P CMakeFiles/HiLiveLibs.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/HiLiveLibs.dir/link.txt --verbose=1 /usr/bin/ar qc libHiLiveLibs.a CMakeFiles/HiLiveLibs.dir/lib/tools_static.cpp.o CMakeFiles/HiLiveLibs.dir/lib/tools.cpp.o CMakeFiles/HiLiveLibs.dir/lib/alnread.cpp.o CMakeFiles/HiLiveLibs.dir/lib/alnstream.cpp.o CMakeFiles/HiLiveLibs.dir/lib/alnout.cpp.o CMakeFiles/HiLiveLibs.dir/lib/illumina_parsers.cpp.o CMakeFiles/HiLiveLibs.dir/lib/kindex.cpp.o CMakeFiles/HiLiveLibs.dir/lib/parallel.cpp.o CMakeFiles/HiLiveLibs.dir/lib/argument_parser.cpp.o /usr/bin/ranlib libHiLiveLibs.a make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 62%] Built target HiLiveLibs make -f CMakeFiles/hilive.dir/build.make CMakeFiles/hilive.dir/depend make -f CMakeFiles/hilive-build.dir/build.make CMakeFiles/hilive-build.dir/depend make -f CMakeFiles/hilive-out.dir/build.make CMakeFiles/hilive-out.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/CMakeFiles/hilive.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/CMakeFiles/hilive-build.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/CMakeFiles/hilive-out.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f CMakeFiles/hilive.dir/build.make CMakeFiles/hilive.dir/build make -f CMakeFiles/hilive-build.dir/build.make CMakeFiles/hilive-build.dir/build make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' make -f CMakeFiles/hilive-out.dir/build.make CMakeFiles/hilive-out.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 75%] Building CXX object CMakeFiles/hilive.dir/tools/hilive.cpp.o [ 75%] Building CXX object CMakeFiles/hilive-out.dir/tools/hilive_out.cpp.o [ 81%] Building CXX object CMakeFiles/hilive-build.dir/tools/build_index.cpp.o /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DHiLive_VERSION_MAJOR=2 -DHiLive_VERSION_MINOR=0 -I/<>/obj-arm-linux-gnueabihf -I/<>/lib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -std=c++14 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_ZLIB=1 -MD -MT CMakeFiles/hilive.dir/tools/hilive.cpp.o -MF CMakeFiles/hilive.dir/tools/hilive.cpp.o.d -o CMakeFiles/hilive.dir/tools/hilive.cpp.o -c /<>/tools/hilive.cpp /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DHiLive_VERSION_MAJOR=2 -DHiLive_VERSION_MINOR=0 -I/<>/obj-arm-linux-gnueabihf -I/<>/lib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -std=c++14 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_ZLIB=1 -MD -MT CMakeFiles/hilive-build.dir/tools/build_index.cpp.o -MF CMakeFiles/hilive-build.dir/tools/build_index.cpp.o.d -o CMakeFiles/hilive-build.dir/tools/build_index.cpp.o -c /<>/tools/build_index.cpp /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DHiLive_VERSION_MAJOR=2 -DHiLive_VERSION_MINOR=0 -I/<>/obj-arm-linux-gnueabihf -I/<>/lib -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -std=c++14 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_ZLIB=1 -MD -MT CMakeFiles/hilive-out.dir/tools/hilive_out.cpp.o -MF CMakeFiles/hilive-out.dir/tools/hilive_out.cpp.o.d -o CMakeFiles/hilive-out.dir/tools/hilive_out.cpp.o -c /<>/tools/hilive_out.cpp In file included from /<>/tools/../lib/tools.h:11, from /<>/tools/../lib/kindex.h:7, from /<>/tools/hilive.cpp:4: /<>/tools/../lib/tools_static.h: In function ‘void ltrim(std::string&)’: /<>/tools/../lib/tools_static.h:304:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 304 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /<>/tools/../lib/headers.h:1, from /<>/tools/hilive.cpp:1: /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/tools/../lib/tools_static.h: In function ‘void rtrim(std::string&)’: /<>/tools/../lib/tools_static.h:314:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 314 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ In file included from /<>/tools/../lib/tools.h:11, from /<>/tools/../lib/kindex.h:7, from /<>/tools/hilive_out.cpp:5: /<>/tools/../lib/tools_static.h: In function ‘void ltrim(std::string&)’: /<>/tools/../lib/tools_static.h:304:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 304 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/boost/program_options/errors.hpp:12, from /usr/include/boost/program_options/options_description.hpp:12, from /usr/include/boost/program_options.hpp:15, from /<>/tools/hilive_out.cpp:1: /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/tools/../lib/tools_static.h: In function ‘void rtrim(std::string&)’: /<>/tools/../lib/tools_static.h:314:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 314 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ In file included from /<>/tools/../lib/tools.h:11, from /<>/tools/../lib/kindex.h:7, from /<>/tools/build_index.cpp:5: /<>/tools/../lib/tools_static.h: In function ‘void ltrim(std::string&)’: /<>/tools/../lib/tools_static.h:304:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 304 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/boost/program_options/errors.hpp:12, from /usr/include/boost/program_options/options_description.hpp:12, from /usr/include/boost/program_options.hpp:15, from /<>/tools/build_index.cpp:1: /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/tools/../lib/tools_static.h: In function ‘void rtrim(std::string&)’: /<>/tools/../lib/tools_static.h:314:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 314 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1126:5: note: declared here 1126 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 87%] Linking CXX executable hilive-build /usr/bin/cmake -E cmake_link_script CMakeFiles/hilive-build.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive "CMakeFiles/hilive-build.dir/tools/build_index.cpp.o" -o hilive-build libHiLiveLibs.a /usr/lib/arm-linux-gnueabihf/libz.so -llz4 /usr/lib/arm-linux-gnueabihf/libboost_system.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_filesystem.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_program_options.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so.1.83.0 -lrt /usr/lib/arm-linux-gnueabihf/libz.so -llz4 -lrt /usr/lib/arm-linux-gnueabihf/libboost_atomic.so.1.83.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 87%] Built target hilive-build [ 93%] Linking CXX executable hilive-out /usr/bin/cmake -E cmake_link_script CMakeFiles/hilive-out.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive "CMakeFiles/hilive-out.dir/tools/hilive_out.cpp.o" -o hilive-out libHiLiveLibs.a /usr/lib/arm-linux-gnueabihf/libz.so -llz4 /usr/lib/arm-linux-gnueabihf/libboost_system.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_filesystem.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_program_options.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so.1.83.0 -lrt /usr/lib/arm-linux-gnueabihf/libz.so -llz4 -lrt /usr/lib/arm-linux-gnueabihf/libboost_atomic.so.1.83.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 93%] Built target hilive-out [100%] Linking CXX executable hilive /usr/bin/cmake -E cmake_link_script CMakeFiles/hilive.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/hilive-2.0a-3build4 -Wdate-time -D_FORTIFY_SOURCE=3 -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive CMakeFiles/hilive.dir/tools/hilive.cpp.o -o hilive libHiLiveLibs.a /usr/lib/arm-linux-gnueabihf/libz.so -llz4 /usr/lib/arm-linux-gnueabihf/libboost_system.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_filesystem.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_program_options.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so.1.83.0 -lrt /usr/lib/arm-linux-gnueabihf/libz.so -llz4 -lrt /usr/lib/arm-linux-gnueabihf/libboost_atomic.so.1.83.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [100%] Built target hilive make[2]: Leaving directory '/<>/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-arm-linux-gnueabihf' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_auto_install --destdir=debian/hilive/ -a debian/rules override_dh_install make[1]: Entering directory '/<>' chrpath --delete obj-arm-linux-gnueabihf/hilive* dh_install make[1]: Leaving directory '/<>' debian/rules override_dh_installdocs make[1]: Entering directory '/<>' markdown README.md > README.html dh_installdocs rm README.html make[1]: Leaving directory '/<>' dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a debugedit: debian/hilive/usr/bin/hilive-build: Unknown DWARF DW_FORM_0x1f21 f44febb55299b40d17ec9976d80640e9a656e664 debugedit: debian/hilive/usr/bin/hilive: Unknown DWARF DW_FORM_0x1f21 2cb66b081dfcf3e0199f11d932101a98f00c10ba dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/hilive/usr/bin/hilive contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/hilive/usr/bin/hilive-build contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 154 INFO: pkgstriptranslations version 154 pkgstriptranslations: processing hilive (in debian/hilive); do_strip: , oemstrip: pkgstriptranslations: processing hilive-dbgsym (in debian/.debhelper/hilive/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/hilive/DEBIAN/control, package hilive, directory debian/hilive pkgstripfiles: Running PNG optimization (using 4 cpus) for package hilive ... pkgstripfiles: No PNG files. dpkg-deb: building package 'hilive' in '../hilive_2.0a-3build4_armhf.deb'. pkgstripfiles: processing control file: debian/.debhelper/hilive/dbgsym-root/DEBIAN/control, package hilive-dbgsym, directory debian/.debhelper/hilive/dbgsym-root dpkg-deb: building package 'hilive-dbgsym' in 'debian/.debhelper/scratch-space/build-hilive/hilive-dbgsym_2.0a-3build4_armhf.deb'. Renaming hilive-dbgsym_2.0a-3build4_armhf.deb to hilive-dbgsym_2.0a-3build4_armhf.ddeb dpkg-genbuildinfo --build=any -O../hilive_2.0a-3build4_armhf.buildinfo dpkg-genchanges --build=any -mLaunchpad Build Daemon -O../hilive_2.0a-3build4_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-12-19T15:59:26Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ hilive_2.0a-3build4_armhf.changes: ---------------------------------- Format: 1.8 Date: Tue, 19 Dec 2023 15:50:29 +0100 Source: hilive Binary: hilive Built-For-Profiles: noudeb Architecture: armhf Version: 2.0a-3build4 Distribution: noble-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: hilive - realtime alignment of Illumina reads Changes: hilive (2.0a-3build4) noble; urgency=medium . * No-change rebuild for boost defaults change. 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/<>/hilive_2.0a-3build4_armhf.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: hilive Binary: hilive hilive-dbgsym Architecture: armhf Version: 2.0a-3build4 Checksums-Md5: ca239d326ac0234afac3d1b8d97ab4e4 9108974 hilive-dbgsym_2.0a-3build4_armhf.ddeb 82d980d1eec55b9f5681df3661befccd 529974 hilive_2.0a-3build4_armhf.deb Checksums-Sha1: 0a140fb96edc13d4dd22082da97df670701b0f23 9108974 hilive-dbgsym_2.0a-3build4_armhf.ddeb ad8306873d535a47c87a53e8b5ce1f8d120c2a79 529974 hilive_2.0a-3build4_armhf.deb Checksums-Sha256: 3c16eb5c5e61bbc1709752c9a45915386de7ca5c8522b4a62e3f347961dcf1ac 9108974 hilive-dbgsym_2.0a-3build4_armhf.ddeb d61e102e9e50b9adace46a7f8fc016c8438c72829ad5ce168162f2d6cffffe8d 529974 hilive_2.0a-3build4_armhf.deb Build-Origin: Ubuntu Build-Architecture: armhf Build-Date: Tue, 19 Dec 2023 15:59:26 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-14), autotools-dev (= 20220109.1), base-files (= 13ubuntu5), base-passwd (= 3.6.3), bash (= 5.2.21-2ubuntu1), binutils (= 2.41.50.20231214-1ubuntu1), binutils-arm-linux-gnueabihf (= 2.41.50.20231214-1ubuntu1), binutils-common (= 2.41.50.20231214-1ubuntu1), bsdextrautils (= 2.39.2-6ubuntu1), bsdutils (= 1:2.39.2-6ubuntu1), build-essential (= 12.10ubuntu1), bzip2 (= 1.0.8-5build1), chrpath (= 0.16-2), cmake (= 3.28.0-1), cmake-data (= 3.28.0-1), coreutils (= 9.4-2ubuntu1), cpp (= 4:13.2.0-2ubuntu1), cpp-13 (= 13.2.0-9ubuntu1), dash (= 0.5.12-6ubuntu1), debconf (= 1.5.82), debhelper (= 13.11.8ubuntu1), debianutils (= 5.14), debugedit (= 1:5.0-5), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.10-1), dpkg (= 1.22.1ubuntu5), dpkg-dev (= 1.22.1ubuntu5), dwz (= 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8.4.0-2ubuntu1), libcurl4-gnutls-dev (= 8.4.0-2ubuntu1), libdb5.3 (= 5.3.28+dfsg2-4), libdebconfclient0 (= 0.271ubuntu1), libdebhelper-perl (= 13.11.8ubuntu1), libdeflate-dev (= 1.18-1), libdeflate0 (= 1.18-1), libdpkg-perl (= 1.22.1ubuntu5), libdw1 (= 0.190-1), libelf1 (= 0.190-1), libexpat1 (= 2.5.0-2), libffi8 (= 3.4.4-2), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-13-dev (= 13.2.0-9ubuntu1), libgcc-s1 (= 13.2.0-9ubuntu1), libgcrypt20 (= 1.10.2-3ubuntu1), libgdbm-compat4 (= 1.23-5), libgdbm6 (= 1.23-5), libgmp10 (= 2:6.3.0+dfsg-2ubuntu4), libgnutls30 (= 3.8.1-4ubuntu6), libgomp1 (= 13.2.0-9ubuntu1), libgpg-error0 (= 1.47-3build1), libgssapi-krb5-2 (= 1.20.1-5build1), libhogweed6 (= 3.9.1-2), libhts-dev (= 1.18+ds-1), libhts3 (= 1.18+ds-1), libhtscodecs2 (= 1.6.0-1), libicu-dev (= 74.2-1ubuntu1), libicu74 (= 74.2-1ubuntu1), libidn2-0 (= 2.3.4-1build1), libisl23 (= 0.26-3), libjansson4 (= 2.14-2), libjsoncpp25 (= 1.9.5-6), libk5crypto3 (= 1.20.1-5build1), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-5build1), libkrb5support0 (= 1.20.1-5build1), libldap2 (= 2.6.6+dfsg-1~exp1ubuntu1), liblz4-1 (= 1.9.4-1), liblz4-dev (= 1.9.4-1), liblzma-dev (= 5.4.5-0.1), liblzma5 (= 5.4.5-0.1), libmagic-mgc (= 1:5.45-2), libmagic1 (= 1:5.45-2), libmd0 (= 1.1.0-1), libmount1 (= 2.39.2-6ubuntu1), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.1-1), libncursesw6 (= 6.4+20231209-1), libnettle8 (= 3.9.1-2), libnghttp2-14 (= 1.58.0-1), libnsl-dev (= 1.3.0-3), libnsl2 (= 1.3.0-3), libp11-kit0 (= 0.25.3-2ubuntu2), libpam-modules (= 1.5.2-9.1ubuntu1), libpam-modules-bin (= 1.5.2-9.1ubuntu1), libpam-runtime (= 1.5.2-9.1ubuntu1), libpam0g (= 1.5.2-9.1ubuntu1), libpcre2-8-0 (= 10.42-4ubuntu1), libperl5.36 (= 5.36.0-10ubuntu1), libpipeline1 (= 1.5.7-1), libproc2-0 (= 2:4.0.4-2ubuntu1), libpsl5 (= 0.21.2-1build1), librhash0 (= 1.4.3-3), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build4), libsasl2-2 (= 2.1.28+dfsg1-4), libsasl2-modules-db (= 2.1.28+dfsg1-4), libseccomp2 (= 2.5.4-2ubuntu1), libselinux1 (= 3.5-1build2), libseqan2-dev (= 2.4.0+dfsg-15ubuntu1), libsframe1 (= 2.41.50.20231214-1ubuntu1), libsmartcols1 (= 2.39.2-6ubuntu1), libssh-4 (= 0.10.5-3ubuntu1), libssl3 (= 3.0.10-1ubuntu3), libstdc++-13-dev (= 13.2.0-9ubuntu1), libstdc++6 (= 13.2.0-9ubuntu1), libsub-override-perl (= 0.10-1), libsystemd0 (= 255-1ubuntu1), libtasn1-6 (= 4.19.0-3), libtinfo6 (= 6.4+20231209-1), libtirpc-common (= 1.3.4+ds-1), libtirpc-dev (= 1.3.4+ds-1), libtirpc3 (= 1.3.4+ds-1), libtool (= 2.4.7-7), libubsan1 (= 13.2.0-9ubuntu1), libuchardet0 (= 0.0.8-1), libudev1 (= 255-1ubuntu1), libunistring5 (= 1.1-2), libuuid1 (= 2.39.2-6ubuntu1), libuv1 (= 1.46.0-2ubuntu1), libxml2 (= 2.9.14+dfsg-1.3build3), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.6.0-14.14), login (= 1:4.13+dfsg1-3ubuntu1), lto-disabled-list (= 44), m4 (= 1.4.19-4), make (= 4.3-4.1build1), man-db (= 2.12.0-1), markdown (= 1.0.1-12), mawk (= 1.3.4.20231126-1), ncurses-base (= 6.4+20231209-1), ncurses-bin (= 6.4+20231209-1), patch (= 2.7.6-7build2), perl (= 5.36.0-10ubuntu1), perl-base (= 5.36.0-10ubuntu1), perl-modules-5.36 (= 5.36.0-10ubuntu1), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.4-2ubuntu1), rpcsvc-proto (= 1.4.2-0ubuntu6), sed (= 4.9-1), sensible-utils (= 0.0.20), sysvinit-utils (= 3.08-3ubuntu1), tar (= 1.34+dfsg-1.2ubuntu2), util-linux (= 2.39.2-6ubuntu1), xz-utils (= 5.4.5-0.1), zlib1g (= 1:1.3.dfsg-3ubuntu1), zlib1g-dev (= 1:1.3.dfsg-3ubuntu1) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1702997429" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ hilive_2.0a-3build4_armhf.deb ----------------------------- new Debian package, version 2.0. size 529974 bytes: control archive=1050 bytes. 824 bytes, 15 lines control 891 bytes, 13 lines md5sums Package: hilive Version: 2.0a-3build4 Architecture: armhf Maintainer: Ubuntu Developers Installed-Size: 1521 Depends: libboost-filesystem1.83.0 (>= 1.83.0), libboost-program-options1.83.0 (>= 1.83.0), libc6 (>= 2.38), libgcc-s1 (>= 3.5), liblz4-1 (>= 0.0~r113), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.3.3) Section: science Priority: optional Homepage: https://gitlab.com/rki_bioinformatics/HiLive2 Description: realtime alignment of Illumina reads HiLive is a read mapping tool that maps Illumina HiSeq (or comparable) reads to a reference genome right in the moment when they are produced. This means, read mapping is finished as soon as the sequencer is finished generating the data. Original-Maintainer: Debian Med Packaging Team drwxr-xr-x root/root 0 2023-12-19 14:50 ./ drwxr-xr-x root/root 0 2023-12-19 14:50 ./usr/ drwxr-xr-x root/root 0 2023-12-19 14:50 ./usr/bin/ -rwxr-xr-x root/root 878280 2023-12-19 14:50 ./usr/bin/hilive -rwxr-xr-x root/root 620176 2023-12-19 14:50 ./usr/bin/hilive-build drwxr-xr-x root/root 0 2023-12-19 14:50 ./usr/share/ drwxr-xr-x root/root 0 2023-12-19 14:50 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-12-19 14:50 ./usr/share/doc/hilive/ -rw-r--r-- root/root 4376 2023-12-19 14:50 ./usr/share/doc/hilive/README.html -rw-r--r-- root/root 278 2020-01-16 10:56 ./usr/share/doc/hilive/README.test -rw-r--r-- root/root 823 2023-12-19 14:50 ./usr/share/doc/hilive/changelog.Debian.gz -rw-r--r-- root/root 1898 2020-01-16 10:56 ./usr/share/doc/hilive/copyright -rw-r--r-- root/root 590 2020-01-16 10:56 ./usr/share/doc/hilive/run-unit-test drwxr-xr-x root/root 0 2023-12-19 14:50 ./usr/share/doc/hilive/tutorial/ -rw-r--r-- root/root 20068 2023-12-19 14:50 ./usr/share/doc/hilive/tutorial/BaseCalls.tar.gz -rw-r--r-- root/root 6290 2019-09-13 08:25 ./usr/share/doc/hilive/tutorial/README.md.gz -rw-r--r-- root/root 201 2019-09-13 08:25 ./usr/share/doc/hilive/tutorial/config.ini -rw-r--r-- root/root 3085 2019-09-13 08:25 ./usr/share/doc/hilive/tutorial/hiv1.fa.gz drwxr-xr-x root/root 0 2023-12-19 14:50 ./usr/share/man/ drwxr-xr-x root/root 0 2023-12-19 14:50 ./usr/share/man/man1/ -rw-r--r-- root/root 648 2023-12-19 14:50 ./usr/share/man/man1/hilive-build.1.gz -rw-r--r-- root/root 3881 2023-12-19 14:50 ./usr/share/man/man1/hilive.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: 164668 Build-Time: 70 Distribution: noble-proposed Host Architecture: armhf Install-Time: 12 Job: hilive_2.0a-3build4.dsc Machine Architecture: arm64 Package: hilive Package-Time: 83 Source-Version: 2.0a-3build4 Space: 164668 Status: successful Version: 2.0a-3build4 -------------------------------------------------------------------------------- Finished at 2023-12-19T15:59:26Z Build needed 00:01:23, 164668k disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27576556 Scanning for processes to kill in build PACKAGEBUILD-27576556