RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '1372900-2843896', '/home/buildd/filecache-default/6ca4616cb59ac2e24a82677a760ccbeb9269ee12'] Synching the system clock with the buildd NTP service... 1 Dec 00:57:03 ntpdate[13014]: adjust time server 10.211.37.1 offset 0.000233 sec Unpacking chroot for build 1372900-2843896 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '1372900-2843896'] Mounting chroot for build 1372900-2843896 RUN: /usr/share/launchpad-buildd/slavebin/apply-ogre-model ['apply-ogre-model', '1372900-2843896', 'universe'] Attempting OGRE for universe in build-1372900-2843896 No OGRE sources.list found. RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '1372900-2843896', 'deb http://ftpmaster.internal/ubuntu lucid main universe'] Overriding sources.list in build-1372900-2843896 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '1372900-2843896'] Updating debian chroot for build 1372900-2843896 Get:1 http://ftpmaster.internal lucid Release.gpg [189B] Get:2 http://ftpmaster.internal lucid Release [65.9kB] Get:3 http://ftpmaster.internal lucid/main Packages [1342kB] Get:4 http://ftpmaster.internal lucid/universe Packages [5091kB] Fetched 6499kB in 19s (342kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: diffutils libnih-dbus1 libnih1 The following packages have been kept back: pkg-create-dbgsym The following packages will be upgraded: base-files base-passwd binutils cpp-4.4 debconf debconf-i18n diff dpkg dpkg-dev g++-4.4 gcc-4.4 gcc-4.4-base initscripts insserv libacl1 libattr1 libc-bin libc-dev-bin libc6 libc6-dev libgcc1 libgcrypt11 libgdbm3 libgmp3c2 libgnutls26 libgomp1 libidn11 libkeyutils1 libsasl2-2 libsasl2-modules libselinux1 libsepol1 libstdc++6 libstdc++6-4.4-dev libtasn1-3 libtext-charwidth-perl libtext-iconv-perl libtimedate-perl libudev0 linux-libc-dev login make makedev mountall passwd pkgbinarymangler python-minimal python2.6-minimal sed sysv-rc sysvinit-utils tar tzdata zlib1g 54 upgraded, 3 newly installed, 0 to remove and 1 not upgraded. Need to get 260kB/29.0MB of archives. After this operation, 4911kB disk space will be freed. WARNING: The following packages cannot be authenticated! libc-dev-bin libc6-dev libc-bin libc6 linux-libc-dev libgomp1 cpp-4.4 gcc-4.4-base libgcc1 gcc-4.4 g++-4.4 libstdc++6-4.4-dev libstdc++6 libgmp3c2 zlib1g binutils libtext-iconv-perl libtext-charwidth-perl debconf-i18n debconf tzdata base-passwd base-files diffutils diff dpkg login sed tar python2.6-minimal python-minimal libnih1 libnih-dbus1 mountall insserv libselinux1 libsepol1 sysvinit-utils sysv-rc passwd initscripts libattr1 libacl1 libudev0 libgcrypt11 libgdbm3 libtasn1-3 libgnutls26 libidn11 libkeyutils1 libsasl2-2 libsasl2-modules libtimedate-perl make makedev dpkg-dev pkgbinarymangler Authentication warning overridden. Get:1 http://ftpmaster.internal lucid/main sysvinit-utils 2.87dsf-4ubuntu13 [109kB] Get:2 http://ftpmaster.internal lucid/main sysv-rc 2.87dsf-4ubuntu13 [78.7kB] Get:3 http://ftpmaster.internal lucid/main initscripts 2.87dsf-4ubuntu13 [71.8kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 260kB in 0s (3199kB/s) (Reading database ... 10424 files and directories currently installed.) Preparing to replace libc-dev-bin 2.10.1-0ubuntu15 (using .../libc-dev-bin_2.10.1-3ubuntu1_armel.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace libc6-dev 2.10.1-0ubuntu15 (using .../libc6-dev_2.10.1-3ubuntu1_armel.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc-bin 2.10.1-0ubuntu15 (using .../libc-bin_2.10.1-3ubuntu1_armel.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.10.1-3ubuntu1) ... (Reading database ... 10424 files and directories currently installed.) Preparing to replace libc6 2.10.1-0ubuntu15 (using .../libc6_2.10.1-3ubuntu1_armel.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.10.1-3ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 10424 files and directories currently installed.) Preparing to replace linux-libc-dev 2.6.31-14.48 (using .../linux-libc-dev_2.6.32-6.8_armel.deb) ... Unpacking replacement linux-libc-dev ... Preparing to replace libgomp1 4.4.1-4ubuntu8 (using .../libgomp1_4.4.2-3ubuntu1_armel.deb) ... Unpacking replacement libgomp1 ... Preparing to replace cpp-4.4 4.4.1-4ubuntu8 (using .../cpp-4.4_4.4.2-3ubuntu1_armel.deb) ... Unpacking replacement cpp-4.4 ... Preparing to replace gcc-4.4-base 4.4.1-4ubuntu8 (using .../gcc-4.4-base_4.4.2-3ubuntu1_armel.deb) ... Unpacking replacement gcc-4.4-base ... Setting up gcc-4.4-base (4.4.2-3ubuntu1) ... (Reading database ... 10384 files and directories currently installed.) Preparing to replace libgcc1 1:4.4.1-4ubuntu8 (using .../libgcc1_1%3a4.4.2-3ubuntu1_armel.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.4.2-3ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 10384 files and directories currently installed.) Preparing to replace gcc-4.4 4.4.1-4ubuntu8 (using .../gcc-4.4_4.4.2-3ubuntu1_armel.deb) ... Unpacking replacement gcc-4.4 ... Preparing to replace g++-4.4 4.4.1-4ubuntu8 (using .../g++-4.4_4.4.2-3ubuntu1_armel.deb) ... Unpacking replacement g++-4.4 ... Preparing to replace libstdc++6-4.4-dev 4.4.1-4ubuntu8 (using .../libstdc++6-4.4-dev_4.4.2-3ubuntu1_armel.deb) ... Unpacking replacement libstdc++6-4.4-dev ... Preparing to replace libstdc++6 4.4.1-4ubuntu8 (using .../libstdc++6_4.4.2-3ubuntu1_armel.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.4.2-3ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 10394 files and directories currently installed.) Preparing to replace libgmp3c2 2:4.3.1+dfsg-1ubuntu3 (using .../libgmp3c2_2%3a4.3.1+dfsg-3_armel.deb) ... Unpacking replacement libgmp3c2 ... Preparing to replace zlib1g 1:1.2.3.3.dfsg-13ubuntu3 (using .../zlib1g_1%3a1.2.3.3.dfsg-15ubuntu1_armel.deb) ... Unpacking replacement zlib1g ... Setting up zlib1g (1:1.2.3.3.dfsg-15ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 10394 files and directories currently installed.) Preparing to replace binutils 2.20-0ubuntu1 (using .../binutils_2.20-4ubuntu3_armel.deb) ... Unpacking replacement binutils ... Preparing to replace libtext-iconv-perl 1.7-1build1 (using .../libtext-iconv-perl_1.7-2_armel.deb) ... Unpacking replacement libtext-iconv-perl ... Setting up libtext-iconv-perl (1.7-2) ... (Reading database ... 10396 files and directories currently installed.) Preparing to replace libtext-charwidth-perl 0.04-5build1 (using .../libtext-charwidth-perl_0.04-6_armel.deb) ... Unpacking replacement libtext-charwidth-perl ... Setting up libtext-charwidth-perl (0.04-6) ... (Reading database ... 10396 files and directories currently installed.) Preparing to replace debconf-i18n 1.5.27ubuntu2 (using .../debconf-i18n_1.5.28ubuntu1_all.deb) ... Unpacking replacement debconf-i18n ... Setting up debconf-i18n (1.5.28ubuntu1) ... (Reading database ... 10396 files and directories currently installed.) Preparing to replace debconf 1.5.27ubuntu2 (using .../debconf_1.5.28ubuntu1_all.deb) ... Unpacking replacement debconf ... Setting up debconf (1.5.28ubuntu1) ... (Reading database ... 10382 files and directories currently installed.) Preparing to replace tzdata 2009o-1ubuntu2 (using .../tzdata_2009s-0ubuntu1_all.deb) ... Unpacking replacement tzdata ... Setting up tzdata (2009s-0ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Dec 1 00:58:25 UTC 2009. Universal Time is now: Tue Dec 1 00:58:25 UTC 2009. Run 'dpkg-reconfigure tzdata' if you wish to change it. (Reading database ... 10385 files and directories currently installed.) Preparing to replace base-passwd 3.5.21 (using .../base-passwd_3.5.22_armel.deb) ... Unpacking replacement base-passwd ... Setting up base-passwd (3.5.22) ... (Reading database ... 10385 files and directories currently installed.) Preparing to replace base-files 5.0.0ubuntu7 (using .../base-files_5.0.0ubuntu8_armel.deb) ... Unpacking replacement base-files ... Setting up base-files (5.0.0ubuntu8) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Selecting previously deselected package diffutils. (Reading database ... 10385 files and directories currently installed.) Unpacking diffutils (from .../diffutils_1%3a2.8.1-18_armel.deb) ... Replacing files in old package diff ... Setting up diffutils (1:2.8.1-18) ... (Reading database ... 10390 files and directories currently installed.) Preparing to replace diff 2.8.1-13 (using .../diff_1%3a2.8.1-18_all.deb) ... Unpacking replacement diff ... Setting up diff (1:2.8.1-18) ... (Reading database ... 10388 files and directories currently installed.) Preparing to replace dpkg 1.15.4ubuntu2 (using .../dpkg_1.15.4.1ubuntu1_armel.deb) ... Unpacking replacement dpkg ... Setting up dpkg (1.15.4.1ubuntu1) ... (Reading database ... 10388 files and directories currently installed.) Preparing to replace login 1:4.1.4.1-1ubuntu2 (using .../login_1%3a4.1.4.2-1ubuntu1_armel.deb) ... Unpacking replacement login ... Setting up login (1:4.1.4.2-1ubuntu1) ... Installing new version of config file /etc/pam.d/login ... Installing new version of config file /etc/securetty ... (Reading database ... 10388 files and directories currently installed.) Preparing to replace sed 4.2.1-1 (using .../archives/sed_4.2.1-4_armel.deb) ... Unpacking replacement sed ... Setting up sed (4.2.1-4) ... (Reading database ... 10388 files and directories currently installed.) Preparing to replace tar 1.22-1 (using .../archives/tar_1.22-2_armel.deb) ... Unpacking replacement tar ... Setting up tar (1.22-2) ... (Reading database ... 10388 files and directories currently installed.) Preparing to replace python2.6-minimal 2.6.4~rc2-0ubuntu1 (using .../python2.6-minimal_2.6.4-1ubuntu1_armel.deb) ... Unpacking replacement python2.6-minimal ... Setting up python2.6-minimal (2.6.4-1ubuntu1) ... (Reading database ... 10386 files and directories currently installed.) Preparing to replace python-minimal 2.6.4~rc1-0ubuntu1 (using .../python-minimal_2.6.4-0ubuntu2_all.deb) ... Unpacking replacement python-minimal ... Setting up python-minimal (2.6.4-0ubuntu2) ... Selecting previously deselected package libnih1. (Reading database ... 10386 files and directories currently installed.) Unpacking libnih1 (from .../libnih1_1.0.0-2_armel.deb) ... Setting up libnih1 (1.0.0-2) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Selecting previously deselected package libnih-dbus1. (Reading database ... 10395 files and directories currently installed.) Unpacking libnih-dbus1 (from .../libnih-dbus1_1.0.0-2_armel.deb) ... Setting up libnih-dbus1 (1.0.0-2) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 10398 files and directories currently installed.) Preparing to replace mountall 1.0 (using .../mountall_1.1_armel.deb) ... Unpacking replacement mountall ... Setting up mountall (1.1) ... Installing new version of config file /etc/init/mountall.conf ... (Reading database ... 10398 files and directories currently installed.) Preparing to replace insserv 1.12.0-11 (using .../insserv_1.12.0-14_armel.deb) ... Unpacking replacement insserv ... Setting up insserv (1.12.0-14) ... (Reading database ... 10399 files and directories currently installed.) Preparing to replace libselinux1 2.0.85-2ubuntu2 (using .../libselinux1_2.0.88-1_armel.deb) ... Unpacking replacement libselinux1 ... Setting up libselinux1 (2.0.88-1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 10399 files and directories currently installed.) Preparing to replace libsepol1 2.0.37-1 (using .../libsepol1_2.0.39-1_armel.deb) ... Unpacking replacement libsepol1 ... Setting up libsepol1 (2.0.39-1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 10399 files and directories currently installed.) Preparing to replace sysvinit-utils 2.87dsf-4ubuntu11 (using .../sysvinit-utils_2.87dsf-4ubuntu13_armel.deb) ... Unpacking replacement sysvinit-utils ... Setting up sysvinit-utils (2.87dsf-4ubuntu13) ... (Reading database ... 10399 files and directories currently installed.) Preparing to replace sysv-rc 2.87dsf-4ubuntu11 (using .../sysv-rc_2.87dsf-4ubuntu13_all.deb) ... Unpacking replacement sysv-rc ... Setting up sysv-rc (2.87dsf-4ubuntu13) ... (Reading database ... 10399 files and directories currently installed.) Preparing to replace passwd 1:4.1.4.1-1ubuntu2 (using .../passwd_1%3a4.1.4.2-1ubuntu1_armel.deb) ... Unpacking replacement passwd ... Setting up passwd (1:4.1.4.2-1ubuntu1) ... (Reading database ... 10396 files and directories currently installed.) Preparing to replace initscripts 2.87dsf-4ubuntu11 (using .../initscripts_2.87dsf-4ubuntu13_armel.deb) ... Unpacking replacement initscripts ... Setting up initscripts (2.87dsf-4ubuntu13) ... Installing new version of config file /etc/init.d/sendsigs ... Installing new version of config file /etc/init.d/umountfs ... (Reading database ... 10395 files and directories currently installed.) Preparing to replace libattr1 1:2.4.43-3 (using .../libattr1_1%3a2.4.44-1_armel.deb) ... Unpacking replacement libattr1 ... Setting up libattr1 (1:2.4.44-1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 10395 files and directories currently installed.) Preparing to replace libacl1 2.2.47-2 (using .../libacl1_2.2.48-1_armel.deb) ... Unpacking replacement libacl1 ... Setting up libacl1 (2.2.48-1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 10395 files and directories currently installed.) Preparing to replace libudev0 147~-6 (using .../libudev0_147~-6.1_armel.deb) ... Unpacking replacement libudev0 ... Setting up libudev0 (147~-6.1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 10395 files and directories currently installed.) Preparing to replace libgcrypt11 1.4.4-2ubuntu2 (using .../libgcrypt11_1.4.4-5ubuntu2_armel.deb) ... Unpacking replacement libgcrypt11 ... Preparing to replace libgdbm3 1.8.3-4 (using .../libgdbm3_1.8.3-8_armel.deb) ... Unpacking replacement libgdbm3 ... Preparing to replace libtasn1-3 2.2-1 (using .../libtasn1-3_2.3-1_armel.deb) ... Unpacking replacement libtasn1-3 ... Preparing to replace libgnutls26 2.8.3-2 (using .../libgnutls26_2.8.4-2_armel.deb) ... Unpacking replacement libgnutls26 ... Preparing to replace libidn11 1.15-1 (using .../libidn11_1.15-2_armel.deb) ... Unpacking replacement libidn11 ... Preparing to replace libkeyutils1 1.2-10 (using .../libkeyutils1_1.2-12_armel.deb) ... Unpacking replacement libkeyutils1 ... Preparing to replace libsasl2-2 2.1.23.dfsg1-1ubuntu3 (using .../libsasl2-2_2.1.23.dfsg1-2ubuntu1_armel.deb) ... Unpacking replacement libsasl2-2 ... Preparing to replace libsasl2-modules 2.1.23.dfsg1-1ubuntu3 (using .../libsasl2-modules_2.1.23.dfsg1-2ubuntu1_armel.deb) ... Unpacking replacement libsasl2-modules ... Preparing to replace libtimedate-perl 1.1600-9 (using .../libtimedate-perl_1.1900-1_all.deb) ... Unpacking replacement libtimedate-perl ... Preparing to replace make 3.81-6 (using .../archives/make_3.81-7_armel.deb) ... Unpacking replacement make ... Preparing to replace makedev 2.3.1-88 (using .../makedev_2.3.1-89_all.deb) ... Unpacking replacement makedev ... Preparing to replace dpkg-dev 1.15.4ubuntu2 (using .../dpkg-dev_1.15.4.1ubuntu1_all.deb) ... Unpacking replacement dpkg-dev ... Preparing to replace pkgbinarymangler 63 (using .../pkgbinarymangler_64_all.deb) ... Unpacking replacement pkgbinarymangler ... Setting up libc-dev-bin (2.10.1-3ubuntu1) ... Setting up linux-libc-dev (2.6.32-6.8) ... Setting up libc6-dev (2.10.1-3ubuntu1) ... Setting up libgomp1 (4.4.2-3ubuntu1) ... Setting up libgmp3c2 (2:4.3.1+dfsg-3) ... Setting up cpp-4.4 (4.4.2-3ubuntu1) ... Setting up binutils (2.20-4ubuntu3) ... Setting up gcc-4.4 (4.4.2-3ubuntu1) ... Setting up libgcrypt11 (1.4.4-5ubuntu2) ... Setting up libgdbm3 (1.8.3-8) ... Setting up libtasn1-3 (2.3-1) ... Setting up libgnutls26 (2.8.4-2) ... Setting up libidn11 (1.15-2) ... Setting up libkeyutils1 (1.2-12) ... Setting up libtimedate-perl (1.1900-1) ... Setting up make (3.81-7) ... Setting up makedev (2.3.1-89) ... Setting up dpkg-dev (1.15.4.1ubuntu1) ... Setting up pkgbinarymangler (64) ... Setting up g++-4.4 (4.4.2-3ubuntu1) ... Setting up libsasl2-modules (2.1.23.dfsg1-2ubuntu1) ... Setting up libsasl2-2 (2.1.23.dfsg1-2ubuntu1) ... Setting up libstdc++6-4.4-dev (4.4.2-3ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '1372900-2843896', '--nolog', '--batch', '--archive=ubuntu', '--purpose=PRIMARY', '--dist=lucid', '--comp=universe', 'hmisc_3.7-0-3.dsc'] Initiating build 1372900-2843896 with 0 processor cores. Automatic build of hmisc_3.7-0-3 on kandis by sbuild/armel 1.170.5 Build started at 20091201-0059 ****************************************************************************** hmisc_3.7-0-3.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 5.0.0), r-base-dev (>= 2.10.0), cdbs, r-cran-chron, r-cran-lattice, r-cran-cluster, r-cran-survival Checking for already installed source dependencies... debhelper: missing r-base-dev: missing cdbs: missing r-cran-chron: missing r-cran-lattice: missing r-cran-cluster: missing r-cran-survival: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper r-base-dev cdbs r-cran-chron r-cran-lattice r-cran-cluster r-cran-survival Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autoconf automake autotools-dev bsdmainutils defoma dpatch fdupes file fontconfig fontconfig-config gettext gettext-base gfortran gfortran-4.4 groff-base html2text intltool intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libdirectfb-1.2-0 libexpat1 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libice6 libjpeg62 libjpeg62-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev libnewt0.52 libpango1.0-0 libpango1.0-common libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpixman-1-0 libpng12-0 libpng12-dev libpopt0 libreadline-dev libreadline6-dev libsm6 libsysfs2 libthai-data libthai0 libtiff4 libts-0.0-0 liburi-perl libwww-perl libx11-6 libx11-data libxau6 libxcb-render-util0 libxcb-render0 libxcb1 libxdmcp6 libxext6 libxft2 libxml-parser-perl libxml2 libxrender1 libxss1 libxt6 m4 man-db po-debconf r-base-core tcl8.5 tk8.5 tsconf ttf-dejavu ttf-dejavu-core ttf-dejavu-extra ucf unzip whiptail x11-common xdg-utils zip zlib1g-dev Suggested packages: autoconf2.13 autoconf-archive gnu-standards autoconf-doc libtool wamerican wordlist whois vacation devscripts doc-base dh-make defoma-doc psfontmgr x-ttcidfont-conf dfontmgr curl gettext-doc gfortran-doc gfortran-4.4-doc libgfortran3-dbg groff libdata-dump-perl ttf-japanese-gothic ttf-japanese-mincho ttf-thryomanes ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp libcrypt-ssleay-perl libio-socket-ssl-perl less www-browser libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html tclreadline desktop-file-utils libgnome2-0 exo-utils libgnomevfs2-bin kdelibs4c2a konqueror libgtk2.0-bin Recommended packages: libfont-freetype-perl patchutils cvs libglib2.0-data shared-mime-info libfribidi0 libmailtools-perl libhtml-format-perl libcompress-bzip2-perl xml-core libmail-sendmail-perl r-recommended r-doc-html xterm x-terminal-emulator x11-utils x11-xserver-utils mime-support The following NEW packages will be installed: autoconf automake autotools-dev bsdmainutils cdbs debhelper defoma dpatch fdupes file fontconfig fontconfig-config gettext gettext-base gfortran gfortran-4.4 groff-base html2text intltool intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libdirectfb-1.2-0 libexpat1 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libice6 libjpeg62 libjpeg62-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev libnewt0.52 libpango1.0-0 libpango1.0-common libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpixman-1-0 libpng12-0 libpng12-dev libpopt0 libreadline-dev libreadline6-dev libsm6 libsysfs2 libthai-data libthai0 libtiff4 libts-0.0-0 liburi-perl libwww-perl libx11-6 libx11-data libxau6 libxcb-render-util0 libxcb-render0 libxcb1 libxdmcp6 libxext6 libxft2 libxml-parser-perl libxml2 libxrender1 libxss1 libxt6 m4 man-db po-debconf r-base-core r-base-dev r-cran-chron r-cran-cluster r-cran-lattice r-cran-survival tcl8.5 tk8.5 tsconf ttf-dejavu ttf-dejavu-core ttf-dejavu-extra ucf unzip whiptail x11-common xdg-utils zip zlib1g-dev 0 upgraded, 100 newly installed, 0 to remove and 1 not upgraded. Need to get 2856kB/52.0MB of archives. After this operation, 139MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! x11-common libmagic1 file libpcre3 libglib2.0-0 libnewt0.52 libpopt0 libxml2 ucf whiptail bsdmainutils gettext-base groff-base libexpat1 liburi-perl libhtml-tagset-perl libhtml-parser-perl libhtml-tree-perl libwww-perl libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libxext6 libxml-parser-perl man-db m4 autoconf autotools-dev automake html2text libcroco3 gettext intltool-debian po-debconf debhelper fdupes intltool cdbs defoma dpatch libfreetype6 ttf-dejavu-core ttf-dejavu-extra ttf-dejavu fontconfig-config libfontconfig1 fontconfig libgfortran3 gfortran-4.4 gfortran libblas3gf libblas-dev libbz2-dev libsysfs2 tsconf libts-0.0-0 libdirectfb-1.2-0 libpixman-1-0 libpng12-0 libxcb-render0 libxcb-render-util0 libxrender1 libcairo2 libdatrie1 libice6 libjpeg62 libjpeg62-dev liblapack3gf liblapack-dev libncurses5-dev libpango1.0-common libthai-data libthai0 libxft2 libpango1.0-0 libpaper1 libpaper-utils libpcrecpp0 libpcre3-dev zlib1g-dev libpng12-dev libreadline6-dev libreadline-dev libsm6 libtiff4 libxss1 libxt6 zip unzip xdg-utils tcl8.5 tk8.5 r-base-core r-base-dev r-cran-chron r-cran-cluster r-cran-lattice r-cran-survival Authentication warning overridden. Get:1 http://ftpmaster.internal lucid/universe r-cran-chron 2.3-33-1 [84.4kB] Get:2 http://ftpmaster.internal lucid/universe r-cran-cluster 1.12.1-2 [333kB] Get:3 http://ftpmaster.internal lucid/universe r-cran-survival 2.35-7-1 [2438kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2856kB in 0s (6433kB/s) Selecting previously deselected package x11-common. (Reading database ... 10410 files and directories currently installed.) Unpacking x11-common (from .../x11-common_1%3a7.4+3ubuntu10_all.deb) ... Selecting previously deselected package libmagic1. Unpacking libmagic1 (from .../libmagic1_5.03-1ubuntu1_armel.deb) ... Selecting previously deselected package file. Unpacking file (from .../file_5.03-1ubuntu1_armel.deb) ... Selecting previously deselected package libpcre3. Unpacking libpcre3 (from .../libpcre3_7.8-3_armel.deb) ... Selecting previously deselected package libglib2.0-0. 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Unpacking r-cran-survival (from .../r-cran-survival_2.35-7-1_armel.deb) ... Setting up x11-common (1:7.4+3ubuntu10) ... Setting up libmagic1 (5.03-1ubuntu1) ... Setting up file (5.03-1ubuntu1) ... Setting up libpcre3 (7.8-3) ... Setting up libglib2.0-0 (2.22.2-0ubuntu1) ... Setting up libnewt0.52 (0.52.10-4ubuntu1) ... Setting up libpopt0 (1.15-1) ... Setting up libxml2 (2.7.5.dfsg-1ubuntu1) ... Setting up ucf (3.0024) ... Setting up whiptail (0.52.10-4ubuntu1) ... Setting up bsdmainutils (8.0.1ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. Setting up gettext-base (0.17-8ubuntu2) ... Setting up groff-base (1.20.1-6) ... Setting up libexpat1 (2.0.1-4ubuntu1) ... Setting up liburi-perl (1.37+dfsg-1ubuntu1) ... Setting up libhtml-tagset-perl (3.20-2) ... Setting up libhtml-parser-perl (3.64-1) ... Setting up libhtml-tree-perl (3.23-1) ... Setting up libwww-perl (5.831-1) ... Setting up libxau6 (1:1.0.5-1) ... Setting up libxdmcp6 (1:1.0.2-3) ... Setting up libxcb1 (1.4-1) ... Setting up libx11-data (2:1.2.2-1ubuntu1) ... Setting up libx11-6 (2:1.2.2-1ubuntu1) ... Setting up libxext6 (2:1.0.99.1-0ubuntu4) ... Setting up libxml-parser-perl (2.36-1.1build2) ... Setting up man-db (2.5.6-4) ... Building database of manual pages ... ... skipping, since this is a buildd Setting up m4 (1.4.13-3) ... Setting up autoconf (2.64-4ubuntu1) ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package autoconf should be updated. install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package autoconf should be updated. install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package autoconf should be updated. Setting up autotools-dev (20090611.1) ... Setting up automake (1:1.11-1) ... update-alternatives: using /usr/bin/automake-1.11 to provide /usr/bin/automake (automake) in auto mode. Setting up html2text (1.3.2a-14) ... Setting up libcroco3 (0.6.2-1) ... Setting up gettext (0.17-8ubuntu2) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16) ... Setting up debhelper (7.4.3ubuntu2) ... Setting up fdupes (1.50-PR2-2) ... Setting up intltool (0.41.0-0ubuntu1) ... Setting up cdbs (0.4.62+nmu1ubuntu2) ... Setting up defoma (0.11.10-2) ... Setting up dpatch (2.0.31) ... Setting up libfreetype6 (2.3.11-1ubuntu1) ... Setting up ttf-dejavu-core (2.30-1) ... Setting up ttf-dejavu-extra (2.30-1) ... Setting up ttf-dejavu (2.30-1) ... Setting up fontconfig-config (2.6.0-1ubuntu12) ... Setting up libfontconfig1 (2.6.0-1ubuntu12) ... Setting up fontconfig (2.6.0-1ubuntu12) ... Updating font configuration of fontconfig... Cleaning up category cid.. Cleaning up category truetype.. Cleaning up category type1.. Updating category type1.. Updating category truetype.. Updating category cid.. Updating fontconfig cache for /usr/share/fonts/truetype/ttf-dejavu Cleaning up old fontconfig caches... done. Regenerating fonts cache... done. Setting up libgfortran3 (4.4.2-3ubuntu1) ... Setting up gfortran-4.4 (4.4.2-3ubuntu1) ... Setting up gfortran (4:4.4.1-1ubuntu2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode. Setting up libblas3gf (1.2-2) ... Setting up libblas-dev (1.2-2) ... update-alternatives: using /usr/lib/libblas.so to provide /usr/lib/libblas-3gf.so (libblas-3gf.so) in auto mode. Setting up libbz2-dev (1.0.5-3) ... Setting up libsysfs2 (2.1.0-6) ... Setting up tsconf (1.0-7) ... Setting up libts-0.0-0 (1.0-7) ... Setting up libdirectfb-1.2-0 (1.2.7-2ubuntu1) ... Setting up libpixman-1-0 (0.16.2-1) ... Setting up libpng12-0 (1.2.40-1) ... Setting up libxcb-render0 (1.4-1) ... Setting up libxcb-render-util0 (0.3.6-1) ... Setting up libxrender1 (1:0.9.4-2ubuntu1) ... Setting up libcairo2 (1.8.8-2ubuntu1) ... Setting up libdatrie1 (0.2.2-1) ... Setting up libice6 (2:1.0.5-1) ... Setting up libjpeg62 (6b-15) ... Setting up libjpeg62-dev (6b-15) ... Setting up liblapack3gf (3.2.1-2) ... Setting up liblapack-dev (3.2.1-2) ... update-alternatives: using /usr/lib/liblapack.so to provide /usr/lib/liblapackgf-3.so (liblapackgf-3.so) in auto mode. Setting up libncurses5-dev (5.7+20090803-2ubuntu2) ... Setting up libpango1.0-common (1.26.1-1) ... Cleaning up font configuration of pango... Updating font configuration of pango... Cleaning up category xfont.. Updating category xfont.. *** You don't have any defomized font packages. *** So we are trying to force to generate pangox.aliases... Setting up libthai-data (0.1.12-1) ... Setting up libthai0 (0.1.12-1) ... Setting up libxft2 (2.1.13-3ubuntu1) ... Setting up libpango1.0-0 (1.26.1-1) ... Setting up libpaper1 (1.1.23+nmu1) ... Creating config file /etc/papersize with new version Setting up libpaper-utils (1.1.23+nmu1) ... Setting up libpcrecpp0 (7.8-3) ... Setting up libpcre3-dev (7.8-3) ... Setting up zlib1g-dev (1:1.2.3.3.dfsg-15ubuntu1) ... Setting up libpng12-dev (1.2.40-1) ... Setting up libreadline6-dev (6.0-5) ... Setting up libreadline-dev (6.0-5) ... Setting up libsm6 (2:1.1.1-1) ... Setting up libtiff4 (3.9.2-1) ... Setting up libxss1 (1:1.1.3-1) ... Setting up libxt6 (1:1.0.6-1) ... Setting up zip (3.0-1ubuntu1) ... Setting up unzip (6.0-1) ... Setting up xdg-utils (1.0.2-6.1) ... Setting up tcl8.5 (8.5.7-1) ... update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode. Setting up tk8.5 (8.5.7-2) ... update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode. Setting up r-base-core (2.10.0-1) ... Setting R_PAPERSIZE_USER default to 'a4' Creating config file /etc/R/Renviron with new version Setting up r-base-dev (2.10.0-1) ... Setting up r-cran-chron (2.3-33-1) ... Setting up r-cran-cluster (1.12.1-2) ... Setting up r-cran-lattice (0.17-26-1) ... Setting up r-cran-survival (2.35-7-1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.10.1-3ubuntu1 make_3.81-7 dpkg-dev_1.15.4.1ubuntu1 g++-4.4_4.4.2-3ubuntu1 gcc-4.4_4.4.2-3ubuntu1 binutils_2.20-4ubuntu3 libstdc++6_4.4.2-3ubuntu1 libstdc++6-4.4-dev_4.4.2-3ubuntu1 ------------------------------------------------------------------------------ gpg: Signature made Fri Nov 6 02:46:34 2009 GMT using DSA key ID 91B0D3B7 gpg: Can't check signature: public key not found dpkg-source: extracting hmisc in hmisc-3.7-0 dpkg-source: info: unpacking hmisc_3.7-0.orig.tar.gz dpkg-source: info: applying hmisc_3.7-0-3.diff.gz dpkg-buildpackage: set CFLAGS to default value: -g -O2 dpkg-buildpackage: set CPPFLAGS to default value: dpkg-buildpackage: set LDFLAGS to default value: -Wl,-Bsymbolic-functions dpkg-buildpackage: set FFLAGS to default value: -g -O2 dpkg-buildpackage: set CXXFLAGS to default value: -g -O2 dpkg-buildpackage: source package hmisc dpkg-buildpackage: source version 3.7-0-3 dpkg-buildpackage: host architecture armel /usr/bin/fakeroot debian/rules clean test -x debian/rules dh_testroot dh_clean dh_clean: Compatibility levels before 5 are deprecated. /usr/bin/make -f debian/rules reverse-config make[1]: Entering directory `/build/buildd/hmisc-3.7-0' make[1]: Nothing to be done for `reverse-config'. make[1]: Leaving directory `/build/buildd/hmisc-3.7-0' if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi patches: if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi if [ "reverse-patches" != "reverse-patches" ] ; then \ /usr/bin/make -f debian/rules update-config ; \ fi for dir in debian/patches ; do \ rm -f $dir/*.log ; \ done if test -d src; then \ find src -regex ".*\..*o" | \ xargs --no-run-if-empty -r rm; \ fi rm -f config.log config.status debian/rules build test -x debian/rules mkdir -p "." echo 5 >debian/compat /usr/bin/make -f debian/rules reverse-config make[1]: Entering directory `/build/buildd/hmisc-3.7-0' make[1]: Nothing to be done for `reverse-config'. make[1]: Leaving directory `/build/buildd/hmisc-3.7-0' if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi patches: if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi if [ "debian/stamp-patched" != "reverse-patches" ] ; then \ /usr/bin/make -f debian/rules update-config ; \ fi make[1]: Entering directory `/build/buildd/hmisc-3.7-0' make[1]: Nothing to be done for `update-config'. make[1]: Leaving directory `/build/buildd/hmisc-3.7-0' /usr/bin/fakeroot debian/rules binary-arch test -x debian/rules dh_testroot dh_clean -k dh_installdirs -A mkdir -p "." dh_installdirs usr/lib/R/site-library if test -f /usr/bin/xvfb-run; then \ xvfb-run \ R CMD INSTALL -l /build/buildd/hmisc-3.7-0/debian/r-cran-hmisc/usr/lib/R/site-library --clean \ . ; \ else \ R CMD INSTALL -l /build/buildd/hmisc-3.7-0/debian/r-cran-hmisc/usr/lib/R/site-library \ --clean . ;\ fi * installing *source* package 'Hmisc' ... ** libs make[1]: Entering directory `/build/buildd/hmisc-3.7-0/src' gcc -std=gnu99 -I/usr/share/R/include -fpic -g -O2 -c Hmisc.c -o Hmisc.o gfortran -fpic -g -O2 -c cidxcn.f -o cidxcn.o gfortran -fpic -g -O2 -c cidxcp.f -o cidxcp.o gfortran -fpic -g -O2 -c hoeffd.f -o hoeffd.o gfortran -fpic -g -O2 -c jacklins.f -o jacklins.o gfortran -fpic -g -O2 -c largrec.f -o largrec.o gcc -std=gnu99 -I/usr/share/R/include -fpic -g -O2 -c mChoice.c -o mChoice.o gcc -std=gnu99 -I/usr/share/R/include -fpic -g -O2 -c nstr.c -o nstr.o gcc -std=gnu99 -I/usr/share/R/include -fpic -g -O2 -c ranksort.c -o ranksort.o gfortran -fpic -g -O2 -c rcorr.f -o rcorr.o gcc -std=gnu99 -I/usr/share/R/include -fpic -g -O2 -c string_box.c -o string_box.o gfortran -fpic -g -O2 -c wclosest.f -o wclosest.o gcc -std=gnu99 -shared -o Hmisc.so Hmisc.o cidxcn.o cidxcp.o hoeffd.o jacklins.o largrec.o mChoice.o nstr.o ranksort.o rcorr.o string_box.o wclosest.o -lgfortran -lm -L/usr/lib/R/lib -lR make[1]: Leaving directory `/build/buildd/hmisc-3.7-0/src' make[1]: Entering directory `/build/buildd/hmisc-3.7-0/src' make[1]: Leaving directory `/build/buildd/hmisc-3.7-0/src' ** R ** inst ** preparing package for lazy loading Warning: package 'survival' was built under R version 2.9.2 and help may not work correctly Loading required package: splines ** help *** installing help indices ** building package indices ... * DONE (Hmisc) rm -vf /build/buildd/hmisc-3.7-0/debian/r-cran-hmisc/usr/lib/R/site-library/R.css \ /build/buildd/hmisc-3.7-0/debian/r-cran-hmisc/usr/lib/R/site-library/Hmisc/COPYING \ /build/buildd/hmisc-3.7-0/debian/r-cran-hmisc/usr/lib/R/site-library/Hmisc/LICENSE.txt removed `/build/buildd/hmisc-3.7-0/debian/r-cran-hmisc/usr/lib/R/site-library/R.css' removed `/build/buildd/hmisc-3.7-0/debian/r-cran-hmisc/usr/lib/R/site-library/Hmisc/COPYING' if test -f debian/overrides; then \ install -d /build/buildd/hmisc-3.7-0/debian/r-cran-hmisc/usr/share/lintian/overrides ; \ install -m 0644 debian/overrides \ /build/buildd/hmisc-3.7-0/debian/r-cran-hmisc/usr/share/lintian/overrides/r-cran-hmisc; \ fi dh_installdirs -pr-cran-hmisc dh_installdocs -pr-cran-hmisc dh_installexamples -pr-cran-hmisc dh_installman -pr-cran-hmisc dh_installinfo -pr-cran-hmisc dh_installmenu -pr-cran-hmisc dh_installcron -pr-cran-hmisc dh_installinit -pr-cran-hmisc dh_installdebconf -pr-cran-hmisc dh_installemacsen -pr-cran-hmisc dh_installcatalogs -pr-cran-hmisc dh_installpam -pr-cran-hmisc dh_installlogrotate -pr-cran-hmisc dh_installlogcheck -pr-cran-hmisc dh_installchangelogs -pr-cran-hmisc dh_installudev -pr-cran-hmisc dh_lintian -pr-cran-hmisc dh_install -pr-cran-hmisc dh_link -pr-cran-hmisc dh_installmime -pr-cran-hmisc dh_strip -pr-cran-hmisc dh_strip debug symbol extraction: all non-arch-all packages for this build platform armel: r-cran-hmisc dh_strip debug symbol extraction: packages to act on: r-cran-hmisc dh_strip debug symbol extraction: ignored packages: WARNING: not running pkgbinarymangler for this package, as requested dpkg-deb: building package `r-cran-hmisc-dbgsym' in `../r-cran-hmisc-dbgsym_3.7-0-3_armel.ddeb'. dh_compress -pr-cran-hmisc dh_fixperms -pr-cran-hmisc dh_makeshlibs -pr-cran-hmisc dh_installdeb -pr-cran-hmisc dh_perl -pr-cran-hmisc dh_shlibdeps -pr-cran-hmisc dpkg-shlibdeps: warning: couldn't find library libR.so needed by debian/r-cran-hmisc/usr/lib/R/site-library/Hmisc/libs/Hmisc.so (ELF format: 'elf32-littlearm'; RPATH: ''). Note: libraries are not searched in other binary packages that do not have any shlibs or symbols file. To help dpkg-shlibdeps find private libraries, you might need to set LD_LIBRARY_PATH. dpkg-shlibdeps: warning: dependency on libgfortran.so.3 could be avoided if "debian/r-cran-hmisc/usr/lib/R/site-library/Hmisc/libs/Hmisc.so" were not uselessly linked against it (they use none of its symbols). dpkg-shlibdeps: warning: dependency on libm.so.6 could be avoided if "debian/r-cran-hmisc/usr/lib/R/site-library/Hmisc/libs/Hmisc.so" were not uselessly linked against it (they use none of its symbols). dh_gencontrol -pr-cran-hmisc # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/r-cran-hmisc/usr/share/doc ] || \ [ ! -d debian/r-cran-hmisc/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/r-cran-hmisc/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/r-cran-hmisc/usr/share/doc/r-cran-hmisc; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/r-cran-hmisc/usr/share/doc/r-cran-hmisc/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in r-cran-hmisc to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/r-cran-hmisc/usr/share/gnome/help ]; then \ cd debian/r-cran-hmisc && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p r-cran-hmisc dh_md5sums -pr-cran-hmisc dh_builddeb -pr-cran-hmisc pkgstriptranslations: processing control file: ./debian/r-cran-hmisc/DEBIAN/control, package r-cran-hmisc, directory ./debian/r-cran-hmisc pkgstriptranslations: r-cran-hmisc does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgstriptranslations: static tarball already exists pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " dpkg-deb: warning: 'debian/r-cran-hmisc/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warnings about the control file(s) dpkg-deb: building package `r-cran-hmisc' in `../r-cran-hmisc_3.7-0-3_armel.deb'. dpkg-genchanges -B -mUbuntu/armel Build Daemon >../hmisc_3.7-0-3_armel.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20091201-0103 Publishing debug debs. chroot-autobuild/build/buildd/r-cran-hmisc_3.7-0-3_armel.deb: new debian package, version 2.0. size 1365578 bytes: control archive= 1545 bytes. 968 bytes, 21 lines control 1956 bytes, 26 lines md5sums Package: r-cran-hmisc Source: hmisc Version: 3.7-0-3 Architecture: armel Maintainer: Ubuntu Developers Original-Maintainer: Dirk Eddelbuettel Installed-Size: 1580 Depends: libc6 (>= 2.4), libgfortran3 (>= 4.3), r-base-core (>= 2.10.0), r-cran-chron, r-cran-lattice, r-cran-cluster, r-cran-survival Conflicts: r-noncran-hmisc Replaces: r-noncran-hmisc Provides: r-noncran-hmisc Section: gnu-r Priority: optional Homepage: http://biostat.mc.vanderbilt.edu/s/Hmisc Description: GNU R miscellaneous functions by Frank Harrell The Hmisc library contains many functions useful for data analysis, high-level graphics, utility operations, functions for computing sample size and power, translating SAS datasets, imputing missing values, advanced table making, variable clustering, character string manipulation, conversion of S objects to LaTeX code, recoding variables, and bootstrap repeated measures analysis. chroot-autobuild/build/buildd/r-cran-hmisc_3.7-0-3_armel.deb: drwxr-xr-x root/root 0 2009-12-01 01:03 ./ drwxr-xr-x root/root 0 2009-12-01 01:03 ./usr/ drwxr-xr-x root/root 0 2009-12-01 01:03 ./usr/share/ drwxr-xr-x root/root 0 2009-12-01 01:03 ./usr/share/lintian/ drwxr-xr-x root/root 0 2009-12-01 01:03 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 70 2009-12-01 01:03 ./usr/share/lintian/overrides/r-cran-hmisc drwxr-xr-x root/root 0 2009-12-01 01:03 ./usr/share/doc/ drwxr-xr-x root/root 0 2009-12-01 01:03 ./usr/share/doc/r-cran-hmisc/ -rw-r--r-- root/root 1728 2009-12-01 01:01 ./usr/share/doc/r-cran-hmisc/copyright -rw-r--r-- root/root 2061 2009-12-01 01:01 ./usr/share/doc/r-cran-hmisc/changelog.Debian.gz drwxr-xr-x root/root 0 2009-12-01 01:01 ./usr/lib/ drwxr-xr-x root/root 0 2009-12-01 01:01 ./usr/lib/R/ drwxr-xr-x root/root 0 2009-12-01 01:03 ./usr/lib/R/site-library/ drwxr-xr-x root/root 0 2009-12-01 01:03 ./usr/lib/R/site-library/Hmisc/ drwxr-xr-x root/root 0 2009-12-01 01:03 ./usr/lib/R/site-library/Hmisc/libs/ -rw-r--r-- root/root 17908 2009-12-01 01:03 ./usr/lib/R/site-library/Hmisc/libs/Hmisc.so -rw-r--r-- root/root 0 2009-12-01 01:01 ./usr/lib/R/site-library/Hmisc/NEWS -rw-r--r-- root/root 0 2009-12-01 01:01 ./usr/lib/R/site-library/Hmisc/WISHLIST -rw-r--r-- root/root 9896 2009-12-01 01:02 ./usr/lib/R/site-library/Hmisc/INDEX -rw-r--r-- root/root 100 2009-12-01 01:01 ./usr/lib/R/site-library/Hmisc/THANKS drwxr-xr-x root/root 0 2009-12-01 01:03 ./usr/lib/R/site-library/Hmisc/Meta/ -rw-r--r-- root/root 263 2009-12-01 01:03 ./usr/lib/R/site-library/Hmisc/Meta/nsInfo.rds -rw-r--r-- root/root 4378 2009-12-01 01:03 ./usr/lib/R/site-library/Hmisc/Meta/links.rds -rw-r--r-- root/root 8908 2009-12-01 01:03 ./usr/lib/R/site-library/Hmisc/Meta/Rd.rds -rw-r--r-- root/root 8909 2009-12-01 01:03 ./usr/lib/R/site-library/Hmisc/Meta/hsearch.rds -rw-r--r-- root/root 1194 2009-12-01 01:01 ./usr/lib/R/site-library/Hmisc/Meta/package.rds -rw-r--r-- root/root 6036 2009-12-01 01:01 ./usr/lib/R/site-library/Hmisc/CHANGELOG -rw-r--r-- root/root 144 2009-12-01 01:01 ./usr/lib/R/site-library/Hmisc/NAMESPACE drwxr-xr-x root/root 0 2009-12-01 01:02 ./usr/lib/R/site-library/Hmisc/help/ -rw-r--r-- root/root 948236 2009-12-01 01:02 ./usr/lib/R/site-library/Hmisc/help/Hmisc.rdb -rw-r--r-- root/root 4137 2009-12-01 01:02 ./usr/lib/R/site-library/Hmisc/help/aliases.rds -rw-r--r-- root/root 1083 2009-12-01 01:02 ./usr/lib/R/site-library/Hmisc/help/paths.rds -rw-r--r-- root/root 3128 2009-12-01 01:02 ./usr/lib/R/site-library/Hmisc/help/Hmisc.rdx -rw-r--r-- root/root 11299 2009-12-01 01:02 ./usr/lib/R/site-library/Hmisc/help/AnIndex drwxr-xr-x root/root 0 2009-12-01 01:01 ./usr/lib/R/site-library/Hmisc/R/ -rw-r--r-- root/root 371056 2009-12-01 01:01 ./usr/lib/R/site-library/Hmisc/R/Hmisc.rdb -rw-r--r-- root/root 384 2009-12-01 01:01 ./usr/lib/R/site-library/Hmisc/R/Hmisc -rw-r--r-- root/root 6589 2009-12-01 01:01 ./usr/lib/R/site-library/Hmisc/R/Hmisc.rdx -rw-r--r-- root/root 168 2009-12-01 01:01 ./usr/lib/R/site-library/Hmisc/todo drwxr-xr-x root/root 0 2009-12-01 01:02 ./usr/lib/R/site-library/Hmisc/html/ -rw-r--r-- root/root 57777 2009-12-01 01:02 ./usr/lib/R/site-library/Hmisc/html/00Index.html -rw-r--r-- root/root 1363 2009-12-01 01:01 ./usr/lib/R/site-library/Hmisc/DESCRIPTION hmisc_3.7-0-3_armel.changes: Format: 1.8 Date: Thu, 05 Nov 2009 20:44:12 -0600 Source: hmisc Binary: r-cran-hmisc Architecture: armel Version: 3.7-0-3 Distribution: lucid Urgency: low Maintainer: Ubuntu/armel Build Daemon Changed-By: Dirk Eddelbuettel Description: r-cran-hmisc - GNU R miscellaneous functions by Frank Harrell Changes: hmisc (3.7-0-3) unstable; urgency=low . * debian/control: Remove (Build-)Depends: for r-cran-acepack (which has been only a Suggests: for several Hmisc versions) as acepack has been removed from CRAN. Checksums-Sha1: 799f39a4759a15af736ef4a5e4061c407a473c6f 1365578 r-cran-hmisc_3.7-0-3_armel.deb Checksums-Sha256: 6bcba634db2301b31af9c824904107bac00a5e2bc1f5c8a53c7da3d9908dc47d 1365578 r-cran-hmisc_3.7-0-3_armel.deb Files: a4d2a5262fc5d8a17b6735533537def0 1365578 gnu-r optional r-cran-hmisc_3.7-0-3_armel.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/hmisc-3.7-0 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --purge r-cran-survival r-cran-cluster groff-base libx11-data unzip m4 fontconfig-config defoma ttf-dejavu-core gettext file zlib1g-dev libhtml-parser-perl ttf-dejavu fontconfig liburi-perl libcairo2 x11-common autotools-dev libcroco3 gfortran liblapack-dev libpopt0 xdg-utils libpcre3-dev libfreetype6 automake libjpeg62 liblapack3gf libxcb1 html2text libreadline6-dev libjpeg62-dev debhelper libfontconfig1 libthai0 libncurses5-dev tcl8.5 libmagic1 libblas3gf libtiff4 libgfortran3 libexpat1 bsdmainutils libxau6 libpcrecpp0 fdupes r-base-dev r-cran-chron libx11-6 tk8.5 libglib2.0-0 libnewt0.52 whiptail intltool libpango1.0-common dpatch libts-0.0-0 libxt6 libwww-perl libxdmcp6 libxss1 libhtml-tree-perl po-debconf libxcb-render-util0 libdirectfb-1.2-0 tsconf libxml-parser-perl libpaper1 libhtml-tagset-perl r-base-core libxml2 zip libpaper-utils libbz2-dev libpng12-0 libthai-data man-db libice6 intltool-debian libpixman-1-0 libxrender1 libreadline-dev libpango1.0-0 ucf libdatrie1 cdbs gettext-base ttf-dejavu-extra libpng12-dev libsm6 libxft2 gfortran-4.4 libxext6 libsysfs2 libxcb-render0 libblas-dev libpcre3 r-cran-lattice autoconf (Reading database ... 16638 files and directories currently installed.) Removing r-cran-survival ... Removing r-cran-cluster ... Removing r-base-dev ... Removing r-cran-chron ... Removing dpatch ... Purging configuration files for dpatch ... Removing libbz2-dev ... Removing libreadline-dev ... Removing cdbs ... Removing libpng12-dev ... Removing r-cran-lattice ... Removing zlib1g-dev ... Removing gfortran ... Removing liblapack-dev ... Removing libpcre3-dev ... Removing liblapack3gf ... Purging configuration files for liblapack3gf ... Removing libreadline6-dev ... Removing libjpeg62-dev ... Removing debhelper ... Removing libncurses5-dev ... Removing libpcrecpp0 ... Purging configuration files for libpcrecpp0 ... Removing fdupes ... Removing intltool ... Removing po-debconf ... Removing libxml-parser-perl ... Removing r-base-core ... Purging configuration files for r-base-core ... Removing zip ... Removing libpaper-utils ... Removing man-db ... Purging configuration files for man-db ... Removing intltool-debian ... Removing libpango1.0-0 ... Purging configuration files for libpango1.0-0 ... Removing gfortran-4.4 ... Removing libblas-dev ... Removing groff-base ... Purging configuration files for groff-base ... Removing unzip ... Removing gettext ... Removing libcairo2 ... Purging configuration files for libcairo2 ... Removing libcroco3 ... Purging configuration files for libcroco3 ... Removing xdg-utils ... Removing automake ... Removing html2text ... Purging configuration files for html2text ... Removing libthai0 ... Purging configuration files for libthai0 ... Removing libblas3gf ... Purging configuration files for libblas3gf ... Removing libtiff4 ... Purging configuration files for libtiff4 ... Removing libgfortran3 ... Purging configuration files for libgfortran3 ... Removing bsdmainutils ... Purging configuration files for bsdmainutils ... Removing tk8.5 ... Purging configuration files for tk8.5 ... Removing libglib2.0-0 ... Purging configuration files for libglib2.0-0 ... Removing libpango1.0-common ... Purging font configuration of pango... Purging category xfont.. Purging configuration files for libpango1.0-common ... Removing libxt6 ... Purging configuration files for libxt6 ... Removing libwww-perl ... Removing libxss1 ... Purging configuration files for libxss1 ... Removing libhtml-tree-perl ... Removing libxcb-render-util0 ... Purging configuration files for libxcb-render-util0 ... Removing libdirectfb-1.2-0 ... Purging configuration files for libdirectfb-1.2-0 ... Removing libpaper1 ... Purging configuration files for libpaper1 ... Removing libxml2 ... Purging configuration files for libxml2 ... Removing libpng12-0 ... Purging configuration files for libpng12-0 ... Removing libthai-data ... Removing libpixman-1-0 ... Purging configuration files for libpixman-1-0 ... Removing libdatrie1 ... Purging configuration files for libdatrie1 ... Removing gettext-base ... Removing libsm6 ... Purging configuration files for libsm6 ... Removing libxft2 ... Purging configuration files for libxft2 ... Removing libxext6 ... Purging configuration files for libxext6 ... Removing libsysfs2 ... Purging configuration files for libsysfs2 ... Removing libxcb-render0 ... Purging configuration files for libxcb-render0 ... Removing libpcre3 ... Purging configuration files for libpcre3 ... Removing autoconf ... Purging configuration files for autoconf ... Removing m4 ... Removing libhtml-parser-perl ... Removing fontconfig ... Purging font configuration of fontconfig... Purging category cid.. Purging category truetype.. Purging category type1.. Updating fontconfig cache for /usr/share/fonts/truetype/ttf-dejavu Purging configuration files for fontconfig ... Removing liburi-perl ... Removing autotools-dev ... Removing libjpeg62 ... Removing libfontconfig1 ... Purging configuration files for libfontconfig1 ... Removing tcl8.5 ... Purging configuration files for tcl8.5 ... Removing libexpat1 ... Purging configuration files for libexpat1 ... 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Processing triggers for libc-bin ... ldconfig deferred processing now taking place ****************************************************************************** Finished at 20091201-0104 Build needed 00:02:48, 5608k disk space Can't open average time db /var/debbuild/avg-build-times Can't open average space db /var/debbuild/avg-build-space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '1372900-2843896'] Scanning for processes to kill in build /srv/home/buildd/build-1372900-2843896/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '1372900-2843896'] Unmounting chroot for build 1372900-2843896... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '1372900-2843896'] Removing build 1372900-2843896