https://launchpad.net/ubuntu/+source/htseq/0.11.2-2/+build/17967116 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-080 4.4.0-166-generic #195-Ubuntu SMP Tue Oct 1 09:36:37 UTC 2019 aarch64 Buildd toolchain package versions: launchpad-buildd_178 python-lpbuildd_178 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 25 Oct 22:46:07 ntpdate[1933]: adjust time server 10.211.37.1 offset 0.004514 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-17967116 --image-type chroot /home/buildd/filecache-default/9d93b4075e16ce7cfbdf01f21507152b0a173b17 Creating target for build PACKAGEBUILD-17967116 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-17967116 Starting target for build PACKAGEBUILD-17967116 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-17967116 'deb http://ftpmaster.internal/ubuntu focal main universe' 'deb http://ftpmaster.internal/ubuntu focal-security main universe' 'deb http://ftpmaster.internal/ubuntu focal-updates main universe' 'deb http://ftpmaster.internal/ubuntu focal-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-17967116 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-17967116 Updating target for build PACKAGEBUILD-17967116 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu focal-security InRelease [79.7 kB] Get:3 http://ftpmaster.internal/ubuntu focal-updates InRelease [79.7 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed InRelease [107 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main arm64 Packages [942 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main Translation-en [505 kB] Get:7 http://ftpmaster.internal/ubuntu focal/universe arm64 Packages [8616 kB] Get:8 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5191 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 Packages [115 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main Translation-en [68.8 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 Packages [434 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/universe Translation-en [304 kB] Fetched 16.7 MB in 10s (1627 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libperl5.28 perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libperl5.30 perl-modules-5.30 The following packages will be upgraded: base-files binutils binutils-aarch64-linux-gnu binutils-common bzip2 cpp-9 debianutils g++-9 gcc-9 gcc-9-base libacl1 libapparmor1 libasan5 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libbz2-1.0 libcap-ng0 libcc1-0 libcryptsetup12 libgcc-9-dev libgcc1 libgcrypt20 libgomp1 libitm1 libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblsan0 liblz4-1 libp11-kit0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsqlite3-0 libstdc++-9-dev libstdc++6 libsystemd0 libtsan0 libubsan1 libudev1 lsb-base perl perl-base systemd systemd-sysv sysvinit-utils 51 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 47.5 MB of archives. After this operation, 46.4 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main arm64 base-files arm64 11ubuntu1 [60.4 kB] Get:2 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 debianutils arm64 4.9 [85.7 kB] Get:3 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 perl-modules-5.30 all 5.30.0-8 [2739 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libperl5.30 arm64 5.30.0-8 [3778 kB] Get:5 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 perl arm64 5.30.0-8 [224 kB] Get:6 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 perl-base arm64 5.30.0-8 [1388 kB] Get:7 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 bzip2 arm64 1.0.8-2 [33.0 kB] Get:8 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libbz2-1.0 arm64 1.0.8-2 [32.9 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main arm64 lsb-base all 11.1.0ubuntu1 [12.2 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 sysvinit-utils arm64 2.96~beta-3ubuntu2 [20.5 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 systemd-sysv arm64 243-2ubuntu1 [9364 B] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libacl1 arm64 2.2.53-5 [17.7 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main arm64 libapparmor1 arm64 2.13.3-5ubuntu2 [33.5 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main arm64 libaudit-common all 1:2.8.5-2ubuntu2 [4080 B] Get:15 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libcap-ng0 arm64 0.7.9-2.1 [10.5 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main arm64 libaudit1 arm64 1:2.8.5-2ubuntu2 [38.3 kB] Get:17 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libjson-c4 arm64 0.13.1+dfsg-6 [28.0 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main arm64 libcryptsetup12 arm64 2:2.2.1-1ubuntu1 [165 kB] Get:19 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libkmod2 arm64 26-3ubuntu1 [39.5 kB] Get:20 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 liblz4-1 arm64 1.9.1-2 [50.0 kB] Get:21 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libseccomp2 arm64 2.4.1-0ubuntu0.19.10.4 [39.9 kB] Get:22 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 systemd arm64 243-2ubuntu1 [3338 kB] Get:23 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libsystemd0 arm64 243-2ubuntu1 [243 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main arm64 libcc1-0 arm64 9.2.1-12ubuntu1 [46.2 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main arm64 binutils-aarch64-linux-gnu arm64 2.33.1-1ubuntu1 [2021 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main arm64 libbinutils arm64 2.33.1-1ubuntu1 [470 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main arm64 binutils-common arm64 2.33.1-1ubuntu1 [203 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main arm64 binutils arm64 2.33.1-1ubuntu1 [3376 B] Get:29 http://ftpmaster.internal/ubuntu focal/main arm64 libgomp1 arm64 9.2.1-12ubuntu1 [80.5 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main arm64 libitm1 arm64 9.2.1-12ubuntu1 [25.0 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main arm64 libatomic1 arm64 9.2.1-12ubuntu1 [9172 B] Get:32 http://ftpmaster.internal/ubuntu focal/main arm64 libasan5 arm64 9.2.1-12ubuntu1 [364 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main arm64 liblsan0 arm64 9.2.1-12ubuntu1 [126 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main arm64 libtsan0 arm64 9.2.1-12ubuntu1 [283 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main arm64 libubsan1 arm64 9.2.1-12ubuntu1 [121 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main arm64 gcc-9-base arm64 9.2.1-12ubuntu1 [19.4 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main arm64 libstdc++6 arm64 9.2.1-12ubuntu1 [467 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main arm64 g++-9 arm64 9.2.1-12ubuntu1 [9463 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main arm64 libstdc++-9-dev arm64 9.2.1-12ubuntu1 [1673 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main arm64 libgcc-9-dev arm64 9.2.1-12ubuntu1 [914 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main arm64 gcc-9 arm64 9.2.1-12ubuntu1 [9106 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main arm64 cpp-9 arm64 9.2.1-12ubuntu1 [8352 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main arm64 libgcc1 arm64 1:9.2.1-12ubuntu1 [34.2 kB] Get:44 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libattr1 arm64 1:2.4.48-5 [12.5 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main arm64 libgcrypt20 arm64 1.8.5-3ubuntu1 [350 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main arm64 libselinux1 arm64 2.9-2build1 [65.6 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main arm64 libsemanage-common all 2.9-3build1 [9736 B] Get:48 http://ftpmaster.internal/ubuntu focal/main arm64 libsemanage1 arm64 2.9-3build1 [79.3 kB] Get:49 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libudev1 arm64 243-2ubuntu1 [73.4 kB] Get:50 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libp11-kit0 arm64 0.23.18.1-2 [177 kB] Get:51 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libsqlite3-0 arm64 3.30.1-1 [498 kB] Get:52 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 liblockfile-bin arm64 1.16-1 [11.2 kB] Get:53 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 liblockfile1 arm64 1.16-1 [6432 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 47.5 MB in 8s (5843 kB/s) (Reading database ... 12731 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu1_arm64.deb ... Unpacking base-files (11ubuntu1) over (10.2ubuntu7) ... Setting up base-files (11ubuntu1) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Updating /root/.profile to current default. (Reading database ... 12731 files and directories currently installed.) Preparing to unpack .../debianutils_4.9_arm64.deb ... Unpacking debianutils (4.9) over (4.8.6.3) ... Setting up debianutils (4.9) ... (Reading database ... 12731 files and directories currently installed.) Preparing to unpack .../perl_5.30.0-8_arm64.deb ... Unpacking perl (5.30.0-8) over (5.28.1-6build1) ... Replacing files in old package perl-base (5.28.1-6build1) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../perl-modules-5.30_5.30.0-8_all.deb ... 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Setting up liblsan0:arm64 (9.2.1-12ubuntu1) ... Setting up libitm1:arm64 (9.2.1-12ubuntu1) ... Setting up libkmod2:arm64 (26-3ubuntu1) ... Setting up libtsan0:arm64 (9.2.1-12ubuntu1) ... Setting up binutils-aarch64-linux-gnu (2.33.1-1ubuntu1) ... Setting up binutils (2.33.1-1ubuntu1) ... Setting up libgcc-9-dev:arm64 (9.2.1-12ubuntu1) ... Setting up perl (5.30.0-8) ... Setting up libcryptsetup12:arm64 (2:2.2.1-1ubuntu1) ... Setting up gcc-9 (9.2.1-12ubuntu1) ... Setting up libstdc++-9-dev:arm64 (9.2.1-12ubuntu1) ... Setting up systemd (243-2ubuntu1) ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from KVM UUID. Setting up g++-9 (9.2.1-12ubuntu1) ... Setting up systemd-sysv (243-2ubuntu1) ... Processing triggers for libc-bin (2.30-0ubuntu2) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-17967116 arm64 focal-proposed -c chroot:build-PACKAGEBUILD-17967116 --arch=arm64 --dist=focal-proposed --nolog htseq_0.11.2-2.dsc Initiating build PACKAGEBUILD-17967116 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-166-generic #195-Ubuntu SMP Tue Oct 1 09:36:37 UTC 2019 aarch64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-080.buildd +==============================================================================+ | htseq 0.11.2-2 (arm64) 25 Oct 2019 22:47 | +==============================================================================+ Package: htseq Version: 0.11.2-2 Source Version: 0.11.2-2 Distribution: focal-proposed Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 I: NOTICE: Log filtering will replace 'build/htseq-3gi9aX/htseq-0.11.2' with '<>' I: NOTICE: Log filtering will replace 'build/htseq-3gi9aX' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-17967116/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- htseq_0.11.2-2.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-rAXWEf/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-rAXWEf/apt_archive ./ InRelease Get:2 copy:/<>/resolver-rAXWEf/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-rAXWEf/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-rAXWEf/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-rAXWEf/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (31.6 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-rAXWEf/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14659 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper-compat (= 12), dh-python, python3-debian, python3-setuptools, python3-all-dev, python3-numpy, python3-matplotlib, python3-pysam, swig, cython3 Filtered Build-Depends: debhelper-compat (= 12), dh-python, python3-debian, python3-setuptools, python3-all-dev, python3-numpy, python3-matplotlib, python3-pysam, swig, cython3 dpkg-deb: building package 'sbuild-build-depends-htseq-dummy' in '/<>/resolver-8QXA3Y/apt_archive/sbuild-build-depends-htseq-dummy.deb'. Ign:1 copy:/<>/resolver-8QXA3Y/apt_archive ./ InRelease Get:2 copy:/<>/resolver-8QXA3Y/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-8QXA3Y/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-8QXA3Y/apt_archive ./ Sources [265 B] Get:5 copy:/<>/resolver-8QXA3Y/apt_archive ./ Packages [587 B] Fetched 2971 B in 0s (33.4 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install htseq build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file fonts-lyx gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasn1-8-heimdal libblas3 libbsd0 libcroco3 libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfreetype6 libgfortran5 libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts2 libhx509-5-heimdal libicu63 libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack3 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libmpdec2 libnghttp2-14 libpipeline1 libpsl5 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libwind0-heimdal libxml2 m4 man-db mime-support po-debconf python-matplotlib-data python3 python3-all python3-all-dev python3-chardet python3-cycler python3-dateutil python3-debian python3-dev python3-distutils python3-kiwisolver python3-lib2to3 python3-matplotlib python3-minimal python3-numpy python3-pkg-resources python3-pyparsing python3-pysam python3-setuptools python3-six python3.7 python3.7-dev python3.7-minimal python3.8 python3.8-dev python3.8-minimal swig swig3.0 ttf-bitstream-vera Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cython-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff krb5-doc krb5-user libjs-jquery-ui-docs libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python-cycler-doc dvipng ffmpeg gir1.2-gtk-3.0 ghostscript inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-nose python3-pyqt4 python3-scipy python3-sip python3-tornado texlive-extra-utils texlive-latex-extra ttf-staypuft gfortran python-numpy-doc python3-pytest python3-numpy-dbg python-pyparsing-doc python-setuptools-doc python3.7-venv python3.7-doc binfmt-support python3.8-venv python3.8-doc swig-doc swig-examples swig3.0-examples swig3.0-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs javascript-common krb5-locales publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl python3-apt python3-pil python3-tk The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file fonts-lyx gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasn1-8-heimdal libblas3 libbsd0 libcroco3 libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfreetype6 libgfortran5 libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts2 libhx509-5-heimdal libicu63 libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack3 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libmpdec2 libnghttp2-14 libpipeline1 libpsl5 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libwind0-heimdal libxml2 m4 man-db mime-support po-debconf python-matplotlib-data python3 python3-all python3-all-dev python3-chardet python3-cycler python3-dateutil python3-debian python3-dev python3-distutils python3-kiwisolver python3-lib2to3 python3-matplotlib python3-minimal python3-numpy python3-pkg-resources python3-pyparsing python3-pysam python3-setuptools python3-six python3.7 python3.7-dev python3.7-minimal python3.8 python3.8-dev python3.8-minimal sbuild-build-depends-htseq-dummy swig swig3.0 ttf-bitstream-vera 0 upgraded, 112 newly installed, 0 to remove and 0 not upgraded. Need to get 61.9 MB of archives. After this operation, 266 MB of additional disk space will be used. Get:1 copy:/<>/resolver-8QXA3Y/apt_archive ./ sbuild-build-depends-htseq-dummy 0.invalid.0 [916 B] Get:2 http://ftpmaster.internal/ubuntu focal/main arm64 libpython3.7-minimal arm64 3.7.5-1ubuntu1 [544 kB] Get:3 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libexpat1 arm64 2.2.9-1 [61.3 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main arm64 python3.7-minimal arm64 3.7.5-1ubuntu1 [1719 kB] Get:5 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3-minimal arm64 3.7.5-1ubuntu1 [23.3 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main arm64 mime-support all 3.64ubuntu1 [30.6 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main arm64 libmpdec2 arm64 2.4.2-2 [74.0 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main arm64 libpython3.7-stdlib arm64 3.7.5-1ubuntu1 [1712 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main arm64 python3.7 arm64 3.7.5-1ubuntu1 [301 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libpython3-stdlib arm64 3.7.5-1ubuntu1 [6844 B] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3 arm64 3.7.5-1ubuntu1 [47.2 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main arm64 libbsd0 arm64 0.10.0-1 [43.7 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main arm64 bsdmainutils arm64 11.1.2ubuntu2 [175 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main arm64 libuchardet0 arm64 0.0.6-3 [65.0 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main arm64 groff-base arm64 1.22.4-3 [813 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main arm64 libpipeline1 arm64 1.5.1-2 [24.4 kB] Get:17 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 man-db arm64 2.9.0-1 [1097 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main arm64 libpython3.8-minimal arm64 3.8.0-2 [701 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main arm64 python3.8-minimal arm64 3.8.0-2 [1818 kB] Get:20 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libmagic-mgc arm64 1:5.37-6 [209 kB] Get:21 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libmagic1 arm64 1:5.37-6 [70.9 kB] Get:22 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 file arm64 1:5.37-6 [23.2 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main arm64 libelf1 arm64 0.176-1.1 [43.6 kB] Get:24 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libglib2.0-0 arm64 2.62.2-1 [1178 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main arm64 libicu63 arm64 63.2-2 [8146 kB] Get:26 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libxml2 arm64 2.9.4+dfsg1-7ubuntu5 [578 kB] Get:27 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3-pkg-resources all 41.2.0-1 [100 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main arm64 python3-six all 1.12.0-2build1 [11.7 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main arm64 gettext-base arm64 0.19.8.1-9 [48.0 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main arm64 libkrb5support0 arm64 1.17-6 [30.8 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main arm64 libk5crypto3 arm64 1.17-6 [80.5 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main arm64 libkeyutils1 arm64 1.6-6ubuntu1 [10.1 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main arm64 libkrb5-3 arm64 1.17-6 [312 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main arm64 libgssapi-krb5-2 arm64 1.17-6 [113 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main arm64 libpsl5 arm64 0.20.2-2 [49.9 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main arm64 libsigsegv2 arm64 2.12-2 [13.3 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main arm64 m4 arm64 1.4.18-2 [194 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main arm64 autoconf all 2.69-11ubuntu1 [321 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main arm64 autotools-dev all 20180224.1 [39.6 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main arm64 automake all 1:1.16.1-4ubuntu3 [522 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main arm64 autopoint all 0.19.8.1-9 [412 kB] Get:42 http://ftpmaster.internal/ubuntu focal/universe arm64 cython3 arm64 0.29.13-0ubuntu2 [1771 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main arm64 libtool all 2.4.6-11 [194 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main arm64 dh-autoreconf all 19 [16.1 kB] Get:45 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libarchive-zip-perl all 1.67-1 [90.4 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main arm64 libsub-override-perl all 0.09-2 [9532 B] Get:47 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libfile-stripnondeterminism-perl all 1.6.1-1 [16.1 kB] Get:48 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 dh-strip-nondeterminism all 1.6.1-1 [5212 B] Get:49 http://ftpmaster.internal/ubuntu focal/main arm64 dwz arm64 0.13-1 [73.4 kB] Get:50 http://ftpmaster.internal/ubuntu focal/main arm64 libdebhelper-perl all 12.7ubuntu1 [52.2 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main arm64 libcroco3 arm64 0.6.13-1 [77.1 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main arm64 gettext arm64 0.19.8.1-9 [853 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main arm64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main arm64 po-debconf all 1.0.21 [233 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main arm64 debhelper all 12.7ubuntu1 [874 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main arm64 python3-lib2to3 all 3.7.5-1build1 [75.6 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main arm64 python3-distutils all 3.7.5-1build1 [142 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main arm64 dh-python all 4.20191017ubuntu1 [88.5 kB] Get:59 http://ftpmaster.internal/ubuntu focal/universe arm64 fonts-lyx all 2.3.3-2 [154 kB] Get:60 http://ftpmaster.internal/ubuntu focal/main arm64 libroken18-heimdal arm64 7.5.0+dfsg-3build1 [39.4 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main arm64 libasn1-8-heimdal arm64 7.5.0+dfsg-3build1 [150 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main arm64 libblas3 arm64 3.8.0-2 [89.8 kB] Get:63 http://ftpmaster.internal/ubuntu focal/main arm64 libheimbase1-heimdal arm64 7.5.0+dfsg-3build1 [27.9 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main arm64 libhcrypto4-heimdal arm64 7.5.0+dfsg-3build1 [85.9 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main arm64 libwind0-heimdal arm64 7.5.0+dfsg-3build1 [47.2 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main arm64 libhx509-5-heimdal arm64 7.5.0+dfsg-3build1 [98.7 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main arm64 libkrb5-26-heimdal arm64 7.5.0+dfsg-3build1 [191 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main arm64 libheimntlm0-heimdal arm64 7.5.0+dfsg-3build1 [14.7 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main arm64 libgssapi3-heimdal arm64 7.5.0+dfsg-3build1 [88.0 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-1build3 [14.8 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main arm64 libsasl2-2 arm64 2.1.27+dfsg-1build3 [48.5 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main arm64 libldap-common all 2.4.48+dfsg-1ubuntu2 [17.3 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main arm64 libldap-2.4-2 arm64 2.4.48+dfsg-1ubuntu2 [146 kB] Get:74 http://ftpmaster.internal/ubuntu focal/main arm64 libnghttp2-14 arm64 1.39.2-1 [75.4 kB] Get:75 http://ftpmaster.internal/ubuntu focal/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2 [49.8 kB] Get:76 http://ftpmaster.internal/ubuntu focal/main arm64 libssh-4 arm64 0.9.0-1ubuntu1 [185 kB] Get:77 http://ftpmaster.internal/ubuntu focal/main arm64 libcurl3-gnutls arm64 7.65.3-1ubuntu3 [209 kB] Get:78 http://ftpmaster.internal/ubuntu focal/universe arm64 libdeflate0 arm64 1.2-1 [51.4 kB] Get:79 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libexpat1-dev arm64 2.2.9-1 [103 kB] Get:80 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libfreetype6 arm64 2.10.1-2 [316 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main arm64 libgfortran5 arm64 9.2.1-12ubuntu1 [333 kB] Get:82 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libhts2 arm64 1.9-11 [264 kB] Get:83 http://ftpmaster.internal/ubuntu focal/main arm64 libjs-jquery all 3.3.1~dfsg-3 [329 kB] Get:84 http://ftpmaster.internal/ubuntu focal/universe arm64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get:85 http://ftpmaster.internal/ubuntu focal/main arm64 liblapack3 arm64 3.8.0-2 [1478 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main arm64 libpython3.7 arm64 3.7.5-1ubuntu1 [1371 kB] Get:87 http://ftpmaster.internal/ubuntu focal/main arm64 libpython3.7-dev arm64 3.7.5-1ubuntu1 [3046 kB] Get:88 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libpython3-dev arm64 3.7.5-1ubuntu1 [6940 B] Get:89 http://ftpmaster.internal/ubuntu focal/main arm64 libpython3.8-stdlib arm64 3.8.0-2 [1637 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main arm64 libpython3.8 arm64 3.8.0-2 [1483 kB] Get:91 http://ftpmaster.internal/ubuntu focal/main arm64 libpython3.8-dev arm64 3.8.0-2 [3735 kB] Get:92 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libpython3-all-dev arm64 3.7.5-1ubuntu1 [1124 B] Get:93 http://ftpmaster.internal/ubuntu focal/universe arm64 ttf-bitstream-vera all 1.10-8 [352 kB] Get:94 http://ftpmaster.internal/ubuntu focal/universe arm64 python-matplotlib-data all 3.0.2-2ubuntu1 [3775 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main arm64 python3.8 arm64 3.8.0-2 [355 kB] Get:96 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3-all arm64 3.7.5-1ubuntu1 [1120 B] Get:97 http://ftpmaster.internal/ubuntu focal/main arm64 python3.7-dev arm64 3.7.5-1ubuntu1 [515 kB] Get:98 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3-dev arm64 3.7.5-1ubuntu1 [1312 B] Get:99 http://ftpmaster.internal/ubuntu focal/main arm64 python3.8-dev arm64 3.8.0-2 [511 kB] Get:100 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3-all-dev arm64 3.7.5-1ubuntu1 [1128 B] Get:101 http://ftpmaster.internal/ubuntu focal/main arm64 python3-chardet all 3.0.4-4 [80.6 kB] Get:102 http://ftpmaster.internal/ubuntu focal/universe arm64 python3-cycler all 0.10.0-1 [7622 B] Get:103 http://ftpmaster.internal/ubuntu focal/main arm64 python3-dateutil all 2.7.3-3 [63.3 kB] Get:104 http://ftpmaster.internal/ubuntu focal/main arm64 python3-debian all 0.1.36 [65.0 kB] Get:105 http://ftpmaster.internal/ubuntu focal/universe arm64 python3-kiwisolver arm64 1.0.1-2build3 [79.1 kB] Get:106 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3-pyparsing all 2.4.2-1 [58.8 kB] Get:107 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3-numpy arm64 1:1.17.3-0ubuntu2 [5444 kB] Get:108 http://ftpmaster.internal/ubuntu focal/universe arm64 python3-matplotlib arm64 3.0.2-2ubuntu1 [4537 kB] Get:109 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 python3-pysam arm64 0.15.2+ds-2build1 [2319 kB] Get:110 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3-setuptools all 41.2.0-1 [253 kB] Get:111 http://ftpmaster.internal/ubuntu focal/universe arm64 swig3.0 arm64 3.0.12-2ubuntu1 [1026 kB] Get:112 http://ftpmaster.internal/ubuntu focal/universe arm64 swig arm64 3.0.12-2ubuntu1 [6468 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 61.9 MB in 3s (24.1 MB/s) Selecting previously unselected package libpython3.7-minimal:arm64. (Reading database ... 14659 files and directories currently installed.) Preparing to unpack .../libpython3.7-minimal_3.7.5-1ubuntu1_arm64.deb ... Unpacking libpython3.7-minimal:arm64 (3.7.5-1ubuntu1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.2.9-1_arm64.deb ... Unpacking libexpat1:arm64 (2.2.9-1) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../python3.7-minimal_3.7.5-1ubuntu1_arm64.deb ... Unpacking python3.7-minimal (3.7.5-1ubuntu1) ... Setting up libpython3.7-minimal:arm64 (3.7.5-1ubuntu1) ... Setting up libexpat1:arm64 (2.2.9-1) ... Setting up python3.7-minimal (3.7.5-1ubuntu1) ... Selecting previously unselected package python3-minimal. (Reading database ... 14908 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.7.5-1ubuntu1_arm64.deb ... Unpacking python3-minimal (3.7.5-1ubuntu1) ... Selecting previously unselected package mime-support. 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Unpacking sbuild-build-depends-htseq-dummy (0.invalid.0) ... Setting up libpipeline1:arm64 (1.5.1-2) ... Setting up libkeyutils1:arm64 (1.6-6ubuntu1) ... Setting up libpsl5:arm64 (0.20.2-2) ... Setting up ttf-bitstream-vera (1.10-8) ... Setting up libpython3.8-minimal:arm64 (3.8.0-2) ... Setting up mime-support (3.64ubuntu1) ... Setting up libmagic-mgc (1:5.37-6) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:arm64 (2.62.2-1) ... No schema files found: doing nothing. Setting up fonts-lyx (2.3.3-2) ... Setting up libdebhelper-perl (12.7ubuntu1) ... Setting up libnghttp2-14:arm64 (1.39.2-1) ... Setting up libmagic1:arm64 (1:5.37-6) ... Setting up libdeflate0:arm64 (1.2-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.37-6) ... Setting up libldap-common (2.4.48+dfsg-1ubuntu2) ... Setting up libicu63:arm64 (63.2-2) ... Setting up libkrb5support0:arm64 (1.17-6) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-1build3) ... Setting up autotools-dev (20180224.1) ... Setting up libblas3:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libexpat1-dev:arm64 (2.2.9-1) ... Setting up libfreetype6:arm64 (2.10.1-2) ... Setting up swig3.0 (3.0.12-2ubuntu1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2) ... Setting up libsigsegv2:arm64 (2.12-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libk5crypto3:arm64 (1.17-6) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-1build3) ... Setting up libgfortran5:arm64 (9.2.1-12ubuntu1) ... Setting up libroken18-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up python3.8-minimal (3.8.0-2) ... Setting up libuchardet0:arm64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libkrb5-3:arm64 (1.17-6) ... Setting up libmpdec2:arm64 (2.4.2-2) ... Setting up libjs-jquery (3.3.1~dfsg-3) ... Setting up libpython3.8-stdlib:arm64 (3.8.0-2) ... Setting up python3.8 (3.8.0-2) ... Setting up python-matplotlib-data (3.0.2-2ubuntu1) ... Setting up libbsd0:arm64 (0.10.0-1) ... Setting up libelf1:arm64 (0.176-1.1) ... Setting up libxml2:arm64 (2.9.4+dfsg1-7ubuntu5) ... Setting up libheimbase1-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libfile-stripnondeterminism-perl (1.6.1-1) ... Setting up libpython3.7-stdlib:arm64 (3.7.5-1ubuntu1) ... Setting up liblapack3:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up swig (3.0.12-2ubuntu1) ... Setting up libpython3.7:arm64 (3.7.5-1ubuntu1) ... Setting up libtool (2.4.6-11) ... Setting up libpython3.7-dev:arm64 (3.7.5-1ubuntu1) ... Setting up libasn1-8-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up m4 (1.4.18-2) ... Setting up libhcrypto4-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libwind0-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up libpython3.8:arm64 (3.8.0-2) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:arm64 (1.17-6) ... Setting up libcroco3:arm64 (0.6.13-1) ... Setting up libssh-4:arm64 (0.9.0-1ubuntu1) ... Setting up autoconf (2.69-11ubuntu1) ... Setting up dwz (0.13-1) ... Setting up groff-base (1.22.4-3) ... Setting up libpython3-stdlib:arm64 (3.7.5-1ubuntu1) ... Setting up automake (1:1.16.1-4ubuntu3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.7 (3.7.5-1ubuntu1) ... Setting up gettext (0.19.8.1-9) ... Setting up libpython3-dev:arm64 (3.7.5-1ubuntu1) ... Setting up libhx509-5-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up python3 (3.7.5-1ubuntu1) ... Setting up man-db (2.9.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python3.7-dev (3.7.5-1ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up python3-six (1.12.0-2build1) ... Setting up python3-pyparsing (2.4.2-1) ... Setting up libpython3.8-dev:arm64 (3.8.0-2) ... Setting up libpython3-all-dev:arm64 (3.7.5-1ubuntu1) ... Setting up python3-cycler (0.10.0-1) ... Setting up cython3 (0.29.13-0ubuntu2) ... Setting up python3.8-dev (3.8.0-2) ... Setting up python3-dateutil (2.7.3-3) ... Setting up python3-lib2to3 (3.7.5-1build1) ... Setting up libkrb5-26-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up python3-pkg-resources (41.2.0-1) ... Setting up python3-distutils (3.7.5-1build1) ... Setting up dh-python (4.20191017ubuntu1) ... Setting up python3-setuptools (41.2.0-1) ... Setting up po-debconf (1.0.21) ... Setting up python3-all (3.7.5-1ubuntu1) ... Setting up libheimntlm0-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up python3-chardet (3.0.4-4) ... Setting up libgssapi3-heimdal:arm64 (7.5.0+dfsg-3build1) ... Setting up python3-debian (0.1.36) ... Setting up python3-dev (3.7.5-1ubuntu1) ... Setting up python3-kiwisolver (1.0.1-2build3) ... Setting up python3-numpy (1:1.17.3-0ubuntu2) ... Setting up python3-all-dev (3.7.5-1ubuntu1) ... Setting up python3-matplotlib (3.0.2-2ubuntu1) ... /usr/lib/python3/dist-packages/matplotlib/backends/qt_editor/figureoptions.py:220: SyntaxWarning: "is not" with a literal. Did you mean "!="? if marker is not 'none': /usr/lib/python3/dist-packages/matplotlib/pyplot.py:2201: SyntaxWarning: "is" with a literal. Did you mean "=="? if fignum is False or fignum is 0: Setting up libldap-2.4-2:arm64 (2.4.48+dfsg-1ubuntu2) ... Setting up libcurl3-gnutls:arm64 (7.65.3-1ubuntu3) ... Setting up libhts2:arm64 (1.9-11) ... Setting up python3-pysam (0.15.2+ds-2build1) ... Setting up dh-autoreconf (19) ... Setting up debhelper (12.7ubuntu1) ... Setting up sbuild-build-depends-htseq-dummy (0.invalid.0) ... Setting up dh-strip-nondeterminism (1.6.1-1) ... Processing triggers for libc-bin (2.30-0ubuntu2) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-166-generic arm64 (aarch64) Toolchain package versions: binutils_2.33.1-1ubuntu1 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-12ubuntu1 gcc-9_9.2.1-12ubuntu1 libc6-dev_2.30-0ubuntu2 libstdc++-9-dev_9.2.1-12ubuntu1 libstdc++6_9.2.1-12ubuntu1 linux-libc-dev_5.3.0-18.19 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.4 autoconf_2.69-11ubuntu1 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11ubuntu1 base-passwd_3.5.46 bash_5.0-4ubuntu1 binutils_2.33.1-1ubuntu1 binutils-aarch64-linux-gnu_2.33.1-1ubuntu1 binutils-common_2.33.1-1ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu2 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3ubuntu2 cpp_4:9.2.1-3.1ubuntu1 cpp-9_9.2.1-12ubuntu1 cython3_0.29.13-0ubuntu2 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.7ubuntu1 debianutils_4.9 dh-autoreconf_19 dh-python_4.20191017ubuntu1 dh-strip-nondeterminism_1.6.1-1 diffutils_1:3.7-3 dpkg_1.19.7ubuntu2 dpkg-dev_1.19.7ubuntu2 dwz_0.13-1 e2fsprogs_1.45.3-4ubuntu2 fakeroot_1.24-1 fdisk_2.34-0.1ubuntu2 file_1:5.37-6 findutils_4.6.0+git+20190209-2ubuntu1 fonts-lyx_2.3.3-2 g++_4:9.2.1-3.1ubuntu1 g++-9_9.2.1-12ubuntu1 gcc_4:9.2.1-3.1ubuntu1 gcc-9_9.2.1-12ubuntu1 gcc-9-base_9.2.1-12ubuntu1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpg_2.2.12-1ubuntu3 gpg-agent_2.2.12-1ubuntu3 gpgconf_2.2.12-1ubuntu3 gpgv_2.2.12-1ubuntu3 grep_3.3-1build1 groff-base_1.22.4-3 gzip_1.10-0ubuntu3 hostname_3.22 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libapparmor1_2.13.3-5ubuntu2 libapt-pkg5.90_1.9.4 libarchive-zip-perl_1.67-1 libargon2-1_0~20171227-0.2 libasan5_9.2.1-12ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-3build1 libassuan0_2.5.3-7ubuntu1 libatomic1_9.2.1-12ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu2 libaudit1_1:2.8.5-2ubuntu2 libbinutils_2.33.1-1ubuntu1 libblas3_3.8.0-2 libblkid1_2.34-0.1ubuntu2 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-0ubuntu2 libc-dev-bin_2.30-0ubuntu2 libc6_2.30-0ubuntu2 libc6-dev_2.30-0ubuntu2 libcap-ng0_0.7.9-2.1 libcap2_1:2.25-2 libcc1-0_9.2.1-12ubuntu1 libcom-err2_1.45.3-4ubuntu2 libcroco3_0.6.13-1 libcryptsetup12_2:2.2.1-1ubuntu1 libcurl3-gnutls_7.65.3-1ubuntu3 libdb5.3_5.3.28+dfsg1-0.6ubuntu1 libdebconfclient0_0.249ubuntu1 libdebhelper-perl_12.7ubuntu1 libdeflate0_1.2-1 libdevmapper1.02.1_2:1.02.155-2ubuntu6 libdpkg-perl_1.19.7ubuntu2 libelf1_0.176-1.1 libexpat1_2.2.9-1 libexpat1-dev_2.2.9-1 libext2fs2_1.45.3-4ubuntu2 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu2 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.6.1-1 libfreetype6_2.10.1-2 libgcc-9-dev_9.2.1-12ubuntu1 libgcc1_1:9.2.1-12ubuntu1 libgcrypt20_1.8.5-3ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_9.2.1-12ubuntu1 libglib2.0-0_2.62.2-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.9-5ubuntu1 libgomp1_9.2.1-12ubuntu1 libgpg-error0_1.36-7 libgssapi-krb5-2_1.17-6 libgssapi3-heimdal_7.5.0+dfsg-3build1 libhcrypto4-heimdal_7.5.0+dfsg-3build1 libheimbase1-heimdal_7.5.0+dfsg-3build1 libheimntlm0-heimdal_7.5.0+dfsg-3build1 libhogweed4_3.4.1-1 libhts2_1.9-11 libhx509-5-heimdal_7.5.0+dfsg-3build1 libicu63_63.2-2 libidn2-0_2.2.0-2 libip4tc2_1.8.3-2ubuntu5 libisl21_0.21-2 libitm1_9.2.1-12ubuntu1 libjs-jquery_3.3.1~dfsg-3 libjs-jquery-ui_1.12.1+dfsg-5 libjson-c4_0.13.1+dfsg-6 libk5crypto3_1.17-6 libkeyutils1_1.6-6ubuntu1 libkmod2_26-3ubuntu1 libkrb5-26-heimdal_7.5.0+dfsg-3build1 libkrb5-3_1.17-6 libkrb5support0_1.17-6 liblapack3_3.8.0-2 libldap-2.4-2_2.4.48+dfsg-1ubuntu2 libldap-common_2.4.48+dfsg-1ubuntu2 liblockfile-bin_1.16-1 liblockfile1_1.16-1 liblsan0_9.2.1-12ubuntu1 liblz4-1_1.9.1-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1ubuntu2 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libncurses6_6.1+20190803-1ubuntu1 libncursesw6_6.1+20190803-1ubuntu1 libnettle6_3.4.1-1 libnghttp2-14_1.39.2-1 libnpth0_1.6-1 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5ubuntu1 libpam-modules-bin_1.3.1-5ubuntu1 libpam-runtime_1.3.1-5ubuntu1 libpam0g_1.3.1-5ubuntu1 libpcre2-8-0_10.32-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-6build1 libperl5.30_5.30.0-8 libpipeline1_1.5.1-2 libpng16-16_1.6.37-1 libprocps7_2:3.3.15-2ubuntu3 libpsl5_0.20.2-2 libpython3-all-dev_3.7.5-1ubuntu1 libpython3-dev_3.7.5-1ubuntu1 libpython3-stdlib_3.7.5-1ubuntu1 libpython3.7_3.7.5-1ubuntu1 libpython3.7-dev_3.7.5-1ubuntu1 libpython3.7-minimal_3.7.5-1ubuntu1 libpython3.7-stdlib_3.7.5-1ubuntu1 libpython3.8_3.8.0-2 libpython3.8-dev_3.8.0-2 libpython3.8-minimal_3.8.0-2 libpython3.8-stdlib_3.8.0-2 libreadline8_8.0-3 libroken18-heimdal_7.5.0+dfsg-3build1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27+dfsg-1build3 libsasl2-modules-db_2.1.27+dfsg-1build3 libseccomp2_2.4.1-0ubuntu0.19.10.4 libselinux1_2.9-2build1 libsemanage-common_2.9-3build1 libsemanage1_2.9-3build1 libsepol1_2.9-2 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1ubuntu2 libsqlite3-0_3.30.1-1 libss2_1.45.3-4ubuntu2 libssh-4_0.9.0-1ubuntu1 libssl1.1_1.1.1c-1ubuntu4 libstdc++-9-dev_9.2.1-12ubuntu1 libstdc++6_9.2.1-12ubuntu1 libsub-override-perl_0.09-2 libsystemd0_243-2ubuntu1 libtasn1-6_4.14-3 libtinfo6_6.1+20190803-1ubuntu1 libtool_2.4.6-11 libtsan0_9.2.1-12ubuntu1 libubsan1_9.2.1-12ubuntu1 libuchardet0_0.0.6-3 libudev1_243-2ubuntu1 libunistring2_0.9.10-2 libuuid1_2.34-0.1ubuntu2 libwind0-heimdal_7.5.0+dfsg-3build1 libxml2_2.9.4+dfsg1-7ubuntu5 libzstd1_1.4.3+dfsg-1 linux-libc-dev_5.3.0-18.19 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu4 logsave_1.45.3-4ubuntu2 lsb-base_11.1.0ubuntu1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.9.0-1 mawk_1.3.3-17ubuntu3 mime-support_3.64ubuntu1 mount_2.34-0.1ubuntu2 ncurses-base_6.1+20190803-1ubuntu1 ncurses-bin_6.1+20190803-1ubuntu1 openssl_1.1.1c-1ubuntu4 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu4 patch_2.7.6-6 perl_5.30.0-8 perl-base_5.30.0-8 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-8 pinentry-curses_1.1.0-3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu3 python-matplotlib-data_3.0.2-2ubuntu1 python3_3.7.5-1ubuntu1 python3-all_3.7.5-1ubuntu1 python3-all-dev_3.7.5-1ubuntu1 python3-chardet_3.0.4-4 python3-cycler_0.10.0-1 python3-dateutil_2.7.3-3 python3-debian_0.1.36 python3-dev_3.7.5-1ubuntu1 python3-distutils_3.7.5-1build1 python3-kiwisolver_1.0.1-2build3 python3-lib2to3_3.7.5-1build1 python3-matplotlib_3.0.2-2ubuntu1 python3-minimal_3.7.5-1ubuntu1 python3-numpy_1:1.17.3-0ubuntu2 python3-pkg-resources_41.2.0-1 python3-pyparsing_2.4.2-1 python3-pysam_0.15.2+ds-2build1 python3-setuptools_41.2.0-1 python3-six_1.12.0-2build1 python3.7_3.7.5-1ubuntu1 python3.7-dev_3.7.5-1ubuntu1 python3.7-minimal_3.7.5-1ubuntu1 python3.8_3.8.0-2 python3.8-dev_3.8.0-2 python3.8-minimal_3.8.0-2 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-htseq-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 swig_3.0.12-2ubuntu1 swig3.0_3.0.12-2ubuntu1 systemd_243-2ubuntu1 systemd-sysv_243-2ubuntu1 sysvinit-utils_2.96~beta-3ubuntu2 tar_1.30+dfsg-6 ttf-bitstream-vera_1.10-8 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 util-linux_2.34-0.1ubuntu2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Oct 8 15:06:52 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./htseq_0.11.2-2.dsc dpkg-source: info: extracting htseq in htseq-0.11.2 dpkg-source: info: unpacking htseq_0.11.2.orig.tar.gz dpkg-source: info: unpacking htseq_0.11.2-2.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-17967116 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-17967116 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-17967116 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package htseq dpkg-buildpackage: info: source version 0.11.2-2 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean I: pybuild base:217: python3.8 setup.py clean symlinking folders for python3 running clean removing '/<>/.pybuild/cpython3_3.8_htseq/build' (and everything under it) 'build/bdist.linux-arm64' does not exist -- can't clean it 'build/scripts-3.8' does not exist -- can't clean it I: pybuild base:217: python3.7 setup.py clean symlinking folders for python3 running clean removing '/<>/.pybuild/cpython3_3.7_htseq/build' (and everything under it) 'build/bdist.linux-arm64' does not exist -- can't clean it 'build/scripts-3.7' does not exist -- can't clean it # setup.py creates some symlinks in clean target # remove these links to keep source tree clean for link in 'src' 'HTSeq' 'doc' 'scripts' 'test' ; do \ if [ -L ${link} ] ; then rm ${link} ; fi \ done make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules build-arch dh build-arch --with python3 --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:217: python3.8 setup.py config symlinking folders for python3 running config I: pybuild base:217: python3.7 setup.py config symlinking folders for python3 running config dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:217: /usr/bin/python3.8 setup.py build symlinking folders for python3 running build running build_py running preprocess cythonizing /bin/sh: 1: cython: not found Cython not found, but transpiled file found SWIGging correcting SWIG for python3 /bin/sh: 1: 2to3: not found SWIG not found, but transpiled files found moving swigged .py module done creating /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq copying HTSeq/__init__.py -> /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq copying HTSeq/_HTSeq_internal.py -> /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq copying HTSeq/StepVector.py -> /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq copying HTSeq/_version.py -> /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq creating /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/scripts copying HTSeq/scripts/__init__.py -> /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/scripts copying HTSeq/scripts/qa.py -> /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/scripts copying HTSeq/scripts/count.py -> /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/scripts running build_ext building 'HTSeq._HTSeq' extension creating build creating build/temp.linux-arm64-3.8 creating build/temp.linux-arm64-3.8/src aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c src/_HTSeq.c -o build/temp.linux-arm64-3.8/src/_HTSeq.o -w aarch64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/src/_HTSeq.o -o /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/_HTSeq.cpython-38-aarch64-linux-gnu.so building 'HTSeq._StepVector' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.8 -c src/StepVector_wrap.cxx -o build/temp.linux-arm64-3.8/src/StepVector_wrap.o -w aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.8/src/StepVector_wrap.o -o /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/_StepVector.cpython-38-aarch64-linux-gnu.so running build_scripts creating build/scripts-3.8 copying and adjusting scripts/htseq-qa -> build/scripts-3.8 copying and adjusting scripts/htseq-count -> build/scripts-3.8 changing mode of build/scripts-3.8/htseq-qa from 664 to 775 changing mode of build/scripts-3.8/htseq-count from 664 to 775 I: pybuild base:217: /usr/bin/python3 setup.py build symlinking folders for python3 running build running build_py running preprocess cythonizing /bin/sh: 1: cython: not found Cython not found, but transpiled file found SWIGging correcting SWIG for python3 /bin/sh: 1: 2to3: not found SWIG not found, but transpiled files found moving swigged .py module done creating /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq copying HTSeq/__init__.py -> /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq copying HTSeq/_HTSeq_internal.py -> /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq copying HTSeq/StepVector.py -> /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq copying HTSeq/_version.py -> /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq creating /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/scripts copying HTSeq/scripts/__init__.py -> /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/scripts copying HTSeq/scripts/qa.py -> /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/scripts copying HTSeq/scripts/count.py -> /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/scripts running build_ext building 'HTSeq._HTSeq' extension creating build/temp.linux-arm64-3.7 creating build/temp.linux-arm64-3.7/src aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c src/_HTSeq.c -o build/temp.linux-arm64-3.7/src/_HTSeq.o -w aarch64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.7/src/_HTSeq.o -o /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/_HTSeq.cpython-37m-aarch64-linux-gnu.so building 'HTSeq._StepVector' extension aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c src/StepVector_wrap.cxx -o build/temp.linux-arm64-3.7/src/StepVector_wrap.o -w aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.7/src/StepVector_wrap.o -o /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/_StepVector.cpython-37m-aarch64-linux-gnu.so running build_scripts creating build/scripts-3.7 copying and adjusting scripts/htseq-qa -> build/scripts-3.7 copying and adjusting scripts/htseq-count -> build/scripts-3.7 changing mode of build/scripts-3.7/htseq-qa from 664 to 775 changing mode of build/scripts-3.7/htseq-count from 664 to 775 dh_auto_test -a -O--buildsystem=pybuild I: pybuild base:217: cd /<>/.pybuild/cpython3_3.8_htseq/build; python3.8 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK I: pybuild base:217: cd /<>/.pybuild/cpython3_3.7_htseq/build; python3.7 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --with python3 --buildsystem=pybuild dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install -a -O--buildsystem=pybuild I: pybuild base:217: /usr/bin/python3.8 setup.py install --root /<>/debian/python3-htseq symlinking folders for python3 running install running build running build_py running preprocess cythonizing /bin/sh: 1: cython: not found Cython not found, but transpiled file found SWIGging correcting SWIG for python3 /bin/sh: 1: 2to3: not found SWIG not found, but transpiled files found moving swigged .py module done copying HTSeq/StepVector.py -> /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq copying HTSeq/_version.py -> /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq running build_ext running build_scripts running install_lib creating /<>/debian/python3-htseq/usr creating /<>/debian/python3-htseq/usr/lib creating /<>/debian/python3-htseq/usr/lib/python3.8 creating /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages creating /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/StepVector.py -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq creating /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/scripts copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/scripts/qa.py -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/scripts copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/scripts/count.py -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/scripts creating /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/scripts/__pycache__ copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/scripts/__pycache__/__init__.cpython-38.pyc -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/scripts/__pycache__ copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/scripts/__init__.py -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/scripts copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/_HTSeq_internal.py -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/_version.py -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/_StepVector.cpython-38-aarch64-linux-gnu.so -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/_HTSeq.cpython-38-aarch64-linux-gnu.so -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq creating /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/__pycache__ copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/__pycache__/StepVector.cpython-38.pyc -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/__pycache__ copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/__pycache__/_version.cpython-38.pyc -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/__pycache__ copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/__pycache__/__init__.cpython-38.pyc -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/__pycache__ copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/__pycache__/_HTSeq_internal.cpython-38.pyc -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/__pycache__ copying /<>/.pybuild/cpython3_3.8_htseq/build/HTSeq/__init__.py -> /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq byte-compiling /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/StepVector.py to StepVector.cpython-38.pyc byte-compiling /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/scripts/qa.py to qa.cpython-38.pyc byte-compiling /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/scripts/count.py to count.cpython-38.pyc byte-compiling /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/scripts/__init__.py to __init__.cpython-38.pyc byte-compiling /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/_HTSeq_internal.py to _HTSeq_internal.cpython-38.pyc byte-compiling /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/_version.py to _version.cpython-38.pyc byte-compiling /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq/__init__.py to __init__.cpython-38.pyc running install_egg_info running egg_info writing HTSeq.egg-info/PKG-INFO writing dependency_links to HTSeq.egg-info/dependency_links.txt writing requirements to HTSeq.egg-info/requires.txt writing top-level names to HTSeq.egg-info/top_level.txt reading manifest file 'HTSeq.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README.md' warning: no previously-included files found matching 'todo.txt' no previously-included directories found matching 'example_data' no previously-included directories found matching 'doc' no previously-included directories found matching 'test' writing manifest file 'HTSeq.egg-info/SOURCES.txt' Copying HTSeq.egg-info to /<>/debian/python3-htseq/usr/lib/python3.8/dist-packages/HTSeq-0.11.2.egg-info Skipping SOURCES.txt running install_scripts creating /<>/debian/python3-htseq/usr/bin copying build/scripts-3.8/htseq-count -> /<>/debian/python3-htseq/usr/bin copying build/scripts-3.8/htseq-qa -> /<>/debian/python3-htseq/usr/bin changing mode of /<>/debian/python3-htseq/usr/bin/htseq-count to 775 changing mode of /<>/debian/python3-htseq/usr/bin/htseq-qa to 775 I: pybuild base:217: /usr/bin/python3 setup.py install --root /<>/debian/python3-htseq symlinking folders for python3 running install running build running build_py running preprocess cythonizing /bin/sh: 1: cython: not found Cython not found, but transpiled file found SWIGging correcting SWIG for python3 /bin/sh: 1: 2to3: not found SWIG not found, but transpiled files found moving swigged .py module done copying HTSeq/StepVector.py -> /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq copying HTSeq/_version.py -> /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq running build_ext running build_scripts running install_lib creating /<>/debian/python3-htseq/usr/lib/python3.7 creating /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages creating /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/StepVector.py -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq creating /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/scripts copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/scripts/qa.py -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/scripts copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/scripts/count.py -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/scripts creating /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/scripts/__pycache__ copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/scripts/__pycache__/__init__.cpython-37.pyc -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/scripts/__pycache__ copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/scripts/__init__.py -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/scripts copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/_HTSeq_internal.py -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/_version.py -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/_HTSeq.cpython-37m-aarch64-linux-gnu.so -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq creating /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/__pycache__ copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/__pycache__/__init__.cpython-37.pyc -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/__pycache__ copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/__pycache__/_version.cpython-37.pyc -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/__pycache__ copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/__pycache__/StepVector.cpython-37.pyc -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/__pycache__ copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/__pycache__/_HTSeq_internal.cpython-37.pyc -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/__pycache__ copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/__init__.py -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq copying /<>/.pybuild/cpython3_3.7_htseq/build/HTSeq/_StepVector.cpython-37m-aarch64-linux-gnu.so -> /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq byte-compiling /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/StepVector.py to StepVector.cpython-37.pyc byte-compiling /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/scripts/qa.py to qa.cpython-37.pyc byte-compiling /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/scripts/count.py to count.cpython-37.pyc byte-compiling /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/scripts/__init__.py to __init__.cpython-37.pyc byte-compiling /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/_HTSeq_internal.py to _HTSeq_internal.cpython-37.pyc byte-compiling /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/_version.py to _version.cpython-37.pyc byte-compiling /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq/__init__.py to __init__.cpython-37.pyc running install_egg_info running egg_info writing HTSeq.egg-info/PKG-INFO writing dependency_links to HTSeq.egg-info/dependency_links.txt writing requirements to HTSeq.egg-info/requires.txt writing top-level names to HTSeq.egg-info/top_level.txt reading manifest file 'HTSeq.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README.md' warning: no previously-included files found matching 'todo.txt' no previously-included directories found matching 'example_data' no previously-included directories found matching 'doc' no previously-included directories found matching 'test' writing manifest file 'HTSeq.egg-info/SOURCES.txt' Copying HTSeq.egg-info to /<>/debian/python3-htseq/usr/lib/python3.7/dist-packages/HTSeq-0.11.2.egg-info Skipping SOURCES.txt running install_scripts copying build/scripts-3.7/htseq-count -> /<>/debian/python3-htseq/usr/bin copying build/scripts-3.7/htseq-qa -> /<>/debian/python3-htseq/usr/bin changing mode of /<>/debian/python3-htseq/usr/bin/htseq-count to 775 changing mode of /<>/debian/python3-htseq/usr/bin/htseq-qa to 775 dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_installman -a -O--buildsystem=pybuild dh_python3 -a -O--buildsystem=pybuild dh_installinit -a -O--buildsystem=pybuild dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-htseq/usr/lib/python3/dist-packages/HTSeq/_StepVector.cpython-38-aarch64-linux-gnu.so debian/python3-htseq/usr/lib/python3/dist-packages/HTSeq/_StepVector.cpython-37m-aarch64-linux-gnu.so were not linked against libpthread.so.0 (they use none of the library's symbols) dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: package python3-htseq: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-htseq: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-htseq: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-htseq: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing python3-htseq (in debian/python3-htseq); do_strip: , oemstrip: pkgstriptranslations: processing python3-htseq-dbgsym (in debian/.debhelper/python3-htseq/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python3-htseq/DEBIAN/control, package python3-htseq, directory debian/python3-htseq pkgstripfiles: processing control file: debian/.debhelper/python3-htseq/dbgsym-root/DEBIAN/control, package python3-htseq-dbgsym, directory debian/.debhelper/python3-htseq/dbgsym-root dpkg-deb: building package 'python3-htseq-dbgsym' in 'debian/.debhelper/scratch-space/build-python3-htseq/python3-htseq-dbgsym_0.11.2-2_arm64.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-htseq ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-htseq' in '../python3-htseq_0.11.2-2_arm64.deb'. Renaming python3-htseq-dbgsym_0.11.2-2_arm64.deb to python3-htseq-dbgsym_0.11.2-2_arm64.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../htseq_0.11.2-2_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20191025-2254 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ htseq_0.11.2-2_arm64.changes: ----------------------------- Format: 1.8 Date: Tue, 08 Oct 2019 16:53:00 +0200 Source: htseq Binary: python3-htseq Architecture: arm64 Version: 0.11.2-2 Distribution: focal-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: python3-htseq - Python3 high-throughput genome sequencing read analysis utilities Changes: htseq (0.11.2-2) unstable; urgency=medium . * Drop Python2 support targeting bug #936711 * debhelper-compat 12 * Standards-Version: 4.4.1 * Use secure URI in Homepage field. * Set upstream metadata fields: Repository. Checksums-Sha1: f367e2b148725d46077d709f8f74f5191daeddb1 8038 htseq_0.11.2-2_arm64.buildinfo d9eeb709aa09dc69f5b41a8744bd03ee4d6955b6 2278312 python3-htseq-dbgsym_0.11.2-2_arm64.ddeb c51bde9370aced63205c73b154431efb7f04af13 351596 python3-htseq_0.11.2-2_arm64.deb Checksums-Sha256: 77af27c7c74bcf9cebf477975188b7d4a8eb4b1d5e13e5beb378d8534a282d9a 8038 htseq_0.11.2-2_arm64.buildinfo f90216c5252c71d305f700e3c2193fa86949dd40839a25e59fbca89ee72027fe 2278312 python3-htseq-dbgsym_0.11.2-2_arm64.ddeb 62c5564449fb081f2ac09b4181c9892ebd02de349e63e63dc7a2fa5638900b18 351596 python3-htseq_0.11.2-2_arm64.deb Files: e2bb121596a4ec0d60027bd52f3ee0db 8038 python optional htseq_0.11.2-2_arm64.buildinfo c3e897a13b592402b5a3bbfd7a03c132 2278312 debug optional python3-htseq-dbgsym_0.11.2-2_arm64.ddeb b0d2dadb8d554ac2d66698e036f1d8e7 351596 python optional python3-htseq_0.11.2-2_arm64.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ python3-htseq_0.11.2-2_arm64.deb -------------------------------- new debian package, version 2.0. size 351596 bytes: control archive=1908 bytes. 1152 bytes, 26 lines control 1843 bytes, 21 lines md5sums 252 bytes, 12 lines * postinst #!/bin/sh 401 bytes, 12 lines * prerm #!/bin/sh Package: python3-htseq Source: htseq Version: 0.11.2-2 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1542 Depends: python3 (<< 3.9), python3 (>= 3.7~), python3-numpy, python3-pysam, python3:any, libc6 (>= 2.17), libgcc1 (>= 1:3.0), libstdc++6 (>= 5) Breaks: python-htseq (<= 0.9.1) Provides: python-htseq Section: python Priority: optional Homepage: https://www-huber.embl.de/users/anders/HTSeq/doc/overview.html Description: Python3 high-throughput genome sequencing read analysis utilities HTSeq can be used to performing a number of common analysis tasks when working with high-throughput genome sequencing reads: . * Getting statistical summaries about the base-call quality scores to study the data quality. * Calculating a coverage vector and exporting it for visualization in a genome browser. * Reading in annotation data from a GFF file. * Assigning aligned reads from an RNA-Seq experiments to exons and genes. . This package contains the Python 3 module. drwxr-xr-x root/root 0 2019-10-08 14:53 ./ drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/ drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/bin/ -rwxr-xr-x root/root 75 2019-10-08 14:53 ./usr/bin/htseq-count -rwxr-xr-x root/root 69 2019-10-08 14:53 ./usr/bin/htseq-qa drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/lib/ drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/lib/python3/ drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq-0.11.2.egg-info/ -rw-r--r-- root/root 1006 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq-0.11.2.egg-info/PKG-INFO -rw-r--r-- root/root 1 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq-0.11.2.egg-info/dependency_links.txt -rw-r--r-- root/root 28 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq-0.11.2.egg-info/requires.txt -rw-r--r-- root/root 6 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq-0.11.2.egg-info/top_level.txt drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq/ -rw-r--r-- root/root 28266 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq/StepVector.py -rw-r--r-- root/root 615824 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq/_HTSeq.cpython-37m-aarch64-linux-gnu.so -rw-r--r-- root/root 599648 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq/_HTSeq.cpython-38-aarch64-linux-gnu.so -rw-r--r-- root/root 1416 2019-01-08 02:36 ./usr/lib/python3/dist-packages/HTSeq/_HTSeq_internal.py -rw-r--r-- root/root 110280 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq/_StepVector.cpython-37m-aarch64-linux-gnu.so -rw-r--r-- root/root 110280 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq/_StepVector.cpython-38-aarch64-linux-gnu.so -rw-r--r-- root/root 44528 2019-01-08 02:36 ./usr/lib/python3/dist-packages/HTSeq/__init__.py -rw-r--r-- root/root 22 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq/_version.py drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/lib/python3/dist-packages/HTSeq/scripts/ -rw-r--r-- root/root 0 2019-01-08 02:36 ./usr/lib/python3/dist-packages/HTSeq/scripts/__init__.py -rw-r--r-- root/root 20087 2019-01-08 02:36 ./usr/lib/python3/dist-packages/HTSeq/scripts/count.py -rw-r--r-- root/root 8342 2019-01-08 02:36 ./usr/lib/python3/dist-packages/HTSeq/scripts/qa.py drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/share/ drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/share/doc/python3-htseq/ -rw-r--r-- root/root 1373 2019-10-08 14:53 ./usr/share/doc/python3-htseq/changelog.Debian.gz -rw-r--r-- root/root 959 2019-10-08 14:53 ./usr/share/doc/python3-htseq/copyright drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/share/man/ drwxr-xr-x root/root 0 2019-10-08 14:53 ./usr/share/man/man1/ -rw-r--r-- root/root 5662 2019-10-08 14:53 ./usr/share/man/man1/htseq-count.1.gz -rw-r--r-- root/root 1994 2019-10-08 14:53 ./usr/share/man/man1/htseq-qa.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build-Space: 52068 Build-Time: 251 Distribution: focal-proposed Host Architecture: arm64 Install-Time: 121 Job: htseq_0.11.2-2.dsc Machine Architecture: arm64 Package: htseq Package-Time: 377 Source-Version: 0.11.2-2 Space: 52068 Status: successful Version: 0.11.2-2 -------------------------------------------------------------------------------- Finished at 20191025-2254 Build needed 00:06:17, 52068k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-17967116 Scanning for processes to kill in build PACKAGEBUILD-17967116