https://launchpad.net/ubuntu/+source/igor/1.4.0+dfsg-4/+build/24626370 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-ppc64el-006 5.4.0-131-generic #147-Ubuntu SMP Fri Oct 14 17:08:20 UTC 2022 ppc64le Buildd toolchain package versions: launchpad-buildd_223~593~ubuntu20.04.1 python3-lpbuildd_223~593~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.6 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1. Syncing the system clock with the buildd NTP service... 6 Nov 15:56:46 ntpdate[1873]: adjust time server 10.211.37.1 offset 0.016967 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=lunar --arch=ppc64el PACKAGEBUILD-24626370 --image-type chroot /home/buildd/filecache-default/e4330c05b9443322bc2e60ef89a014a41584dba0 Creating target for build PACKAGEBUILD-24626370 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=lunar --arch=ppc64el PACKAGEBUILD-24626370 Starting target for build PACKAGEBUILD-24626370 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=lunar --arch=ppc64el PACKAGEBUILD-24626370 'deb http://ftpmaster.internal/ubuntu lunar main universe' 'deb http://ftpmaster.internal/ubuntu lunar-security main universe' 'deb http://ftpmaster.internal/ubuntu lunar-updates main universe' 'deb http://ftpmaster.internal/ubuntu lunar-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-24626370 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=lunar --arch=ppc64el PACKAGEBUILD-24626370 Updating target for build PACKAGEBUILD-24626370 Get:1 http://ftpmaster.internal/ubuntu lunar InRelease [224 kB] Get:2 http://ftpmaster.internal/ubuntu lunar-security InRelease [74.9 kB] Get:3 http://ftpmaster.internal/ubuntu lunar-updates InRelease [74.9 kB] Get:4 http://ftpmaster.internal/ubuntu lunar-proposed InRelease [74.9 kB] Get:5 http://ftpmaster.internal/ubuntu lunar/main ppc64el Packages [1338 kB] Get:6 http://ftpmaster.internal/ubuntu lunar/main Translation-en [510 kB] Get:7 http://ftpmaster.internal/ubuntu lunar/universe ppc64el Packages [14.1 MB] Get:8 http://ftpmaster.internal/ubuntu lunar/universe Translation-en [5791 kB] Get:9 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el Packages [345 kB] Get:10 http://ftpmaster.internal/ubuntu lunar-proposed/main Translation-en [142 kB] Get:11 http://ftpmaster.internal/ubuntu lunar-proposed/universe ppc64el Packages [2486 kB] Get:12 http://ftpmaster.internal/ubuntu lunar-proposed/universe Translation-en [1208 kB] Fetched 26.4 MB in 11s (2474 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libperl5.34 perl-modules-5.34 sgml-base Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libperl5.36 perl-modules-5.36 The following packages will be upgraded: apt base-files base-passwd bash binutils binutils-common binutils-powerpc64le-linux-gnu cpp-12 debianutils fakeroot g++-12 gcc-12 gcc-12-base gpg gpg-agent gpgconf gpgv grep init init-system-helpers libapparmor1 libapt-pkg6.0 libasan8 libassuan0 libatomic1 libaudit-common libaudit1 libbinutils libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcc1-0 libcrypt-dev libcrypt1 libctf-nobfd0 libctf0 libfakeroot libffi8 libgcc-12-dev libgcc-s1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libidn2-0 libitm1 libjson-c5 liblsan0 liblz4-1 liblzma5 libp11-kit0 libpng16-16 libquadmath0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsqlite3-0 libstdc++-12-dev libstdc++6 libsystemd-shared libsystemd0 libtasn1-6 libtsan2 libubsan1 libudev1 libunistring2 linux-libc-dev lto-disabled-list perl perl-base readline-common sgml-base systemd systemd-sysv tzdata usrmerge xz-utils zlib1g 83 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 89.6 MB of archives. After this operation, 48.6 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libcrypt-dev ppc64el 1:4.4.30-1 [143 kB] Get:2 http://ftpmaster.internal/ubuntu lunar/main ppc64el libc6-dev ppc64el 2.36-0ubuntu4 [2057 kB] Get:3 http://ftpmaster.internal/ubuntu lunar/main ppc64el libc-dev-bin ppc64el 2.36-0ubuntu4 [20.9 kB] Get:4 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libcrypt1 ppc64el 1:4.4.30-1 [106 kB] Get:5 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el linux-libc-dev ppc64el 5.19.0-23.24 [1335 kB] Get:6 http://ftpmaster.internal/ubuntu lunar/main ppc64el libcc1-0 ppc64el 12.2.0-9ubuntu1 [48.9 kB] Get:7 http://ftpmaster.internal/ubuntu lunar/main ppc64el gcc-12-base ppc64el 12.2.0-9ubuntu1 [19.5 kB] Get:8 http://ftpmaster.internal/ubuntu lunar/main ppc64el libgcc-s1 ppc64el 12.2.0-9ubuntu1 [34.0 kB] Get:9 http://ftpmaster.internal/ubuntu lunar/main ppc64el libgomp1 ppc64el 12.2.0-9ubuntu1 [139 kB] Get:10 http://ftpmaster.internal/ubuntu lunar/main ppc64el libitm1 ppc64el 12.2.0-9ubuntu1 [32.4 kB] Get:11 http://ftpmaster.internal/ubuntu lunar/main ppc64el libatomic1 ppc64el 12.2.0-9ubuntu1 [10.6 kB] Get:12 http://ftpmaster.internal/ubuntu lunar/main ppc64el libasan8 ppc64el 12.2.0-9ubuntu1 [2450 kB] Get:13 http://ftpmaster.internal/ubuntu lunar/main ppc64el liblsan0 ppc64el 12.2.0-9ubuntu1 [1082 kB] Get:14 http://ftpmaster.internal/ubuntu lunar/main ppc64el libtsan2 ppc64el 12.2.0-9ubuntu1 [2565 kB] Get:15 http://ftpmaster.internal/ubuntu lunar/main ppc64el libubsan1 ppc64el 12.2.0-9ubuntu1 [992 kB] Get:16 http://ftpmaster.internal/ubuntu lunar/main ppc64el libquadmath0 ppc64el 12.2.0-9ubuntu1 [155 kB] Get:17 http://ftpmaster.internal/ubuntu lunar/main ppc64el g++-12 ppc64el 12.2.0-9ubuntu1 [11.4 MB] Get:18 http://ftpmaster.internal/ubuntu lunar/main ppc64el libstdc++-12-dev ppc64el 12.2.0-9ubuntu1 [2289 kB] Get:19 http://ftpmaster.internal/ubuntu lunar/main ppc64el libgcc-12-dev ppc64el 12.2.0-9ubuntu1 [1513 kB] Get:20 http://ftpmaster.internal/ubuntu lunar/main ppc64el gcc-12 ppc64el 12.2.0-9ubuntu1 [19.8 MB] Get:21 http://ftpmaster.internal/ubuntu lunar/main ppc64el cpp-12 ppc64el 12.2.0-9ubuntu1 [10.0 MB] Get:22 http://ftpmaster.internal/ubuntu lunar/main ppc64el libstdc++6 ppc64el 12.2.0-9ubuntu1 [787 kB] Get:23 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el zlib1g ppc64el 1:1.2.11.dfsg-4.1ubuntu2 [71.9 kB] Get:24 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libctf0 ppc64el 2.39-8ubuntu2 [109 kB] Get:25 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libctf-nobfd0 ppc64el 2.39-8ubuntu2 [109 kB] Get:26 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libbinutils ppc64el 2.39-8ubuntu2 [676 kB] Get:27 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el binutils-common ppc64el 2.39-8ubuntu2 [223 kB] Get:28 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el binutils ppc64el 2.39-8ubuntu2 [3110 B] Get:29 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el binutils-powerpc64le-linux-gnu ppc64el 2.39-8ubuntu2 [2426 kB] Get:30 http://ftpmaster.internal/ubuntu lunar/main ppc64el libc6 ppc64el 2.36-0ubuntu4 [3180 kB] Get:31 http://ftpmaster.internal/ubuntu lunar/main ppc64el base-files ppc64el 12.3ubuntu1 [73.5 kB] Get:32 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el debianutils ppc64el 5.7-0.4 [103 kB] Get:33 http://ftpmaster.internal/ubuntu lunar/main ppc64el bash ppc64el 5.2-1ubuntu2 [952 kB] Get:34 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el grep ppc64el 3.8-3 [170 kB] Get:35 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el perl-modules-5.36 all 5.36.0-4ubuntu2 [2984 kB] Get:36 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libperl5.36 ppc64el 5.36.0-4ubuntu2 [4854 kB] Get:37 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el perl ppc64el 5.36.0-4ubuntu2 [235 kB] Get:38 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el perl-base ppc64el 5.36.0-4ubuntu2 [1855 kB] Get:39 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libgdbm6 ppc64el 1.23-3 [40.4 kB] Get:40 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libgdbm-compat4 ppc64el 1.23-3 [6602 B] Get:41 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libselinux1 ppc64el 3.4-1build1 [96.4 kB] Get:42 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el base-passwd ppc64el 3.6.1 [51.2 kB] Get:43 http://ftpmaster.internal/ubuntu lunar/main ppc64el usrmerge all 29ubuntu2 [55.8 kB] Get:44 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el init-system-helpers all 1.65.2 [38.1 kB] Get:45 http://ftpmaster.internal/ubuntu lunar/main ppc64el libc-bin ppc64el 2.36-0ubuntu4 [745 kB] Get:46 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el liblz4-1 ppc64el 1.9.4-1 [104 kB] Get:47 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el liblzma5 ppc64el 5.2.7-0.1 [125 kB] Get:48 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libapparmor1 ppc64el 3.0.7-1ubuntu3 [41.1 kB] Get:49 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libaudit-common all 1:3.0.7-1ubuntu2 [5018 B] Get:50 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libcap-ng0 ppc64el 0.8.3-1build1 [16.0 kB] Get:51 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libaudit1 ppc64el 1:3.0.7-1ubuntu2 [50.7 kB] Get:52 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libseccomp2 ppc64el 2.5.4-1ubuntu2 [58.7 kB] Get:53 http://ftpmaster.internal/ubuntu lunar/main ppc64el systemd-sysv ppc64el 251.4-1ubuntu7 [11.2 kB] Get:54 http://ftpmaster.internal/ubuntu lunar/main ppc64el systemd ppc64el 251.4-1ubuntu7 [2999 kB] Get:55 http://ftpmaster.internal/ubuntu lunar/main ppc64el libsystemd-shared ppc64el 251.4-1ubuntu7 [1883 kB] Get:56 http://ftpmaster.internal/ubuntu lunar/main ppc64el libsystemd0 ppc64el 251.4-1ubuntu7 [401 kB] Get:57 http://ftpmaster.internal/ubuntu lunar/main ppc64el libudev1 ppc64el 251.4-1ubuntu7 [99.4 kB] Get:58 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libapt-pkg6.0 ppc64el 2.5.4 [1017 kB] Get:59 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libgpg-error0 ppc64el 1.46-1 [85.1 kB] Get:60 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el gpgv ppc64el 2.2.40-1ubuntu1 [171 kB] Get:61 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libunistring2 ppc64el 1.0-2 [561 kB] Get:62 http://ftpmaster.internal/ubuntu lunar/main ppc64el libidn2-0 ppc64el 2.3.3-1build1 [65.9 kB] Get:63 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libffi8 ppc64el 3.4.4-1 [27.8 kB] Get:64 http://ftpmaster.internal/ubuntu lunar/main ppc64el libp11-kit0 ppc64el 0.24.1-1ubuntu2 [257 kB] Get:65 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libtasn1-6 ppc64el 4.19.0-2 [53.6 kB] Get:66 http://ftpmaster.internal/ubuntu lunar/main ppc64el libgnutls30 ppc64el 3.7.7-2ubuntu2 [1030 kB] Get:67 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el apt ppc64el 2.5.4 [1417 kB] Get:68 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el init ppc64el 1.65.2 [4812 B] Get:69 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el sgml-base all 1.31 [11.4 kB] Get:70 http://ftpmaster.internal/ubuntu lunar/main ppc64el libsemanage-common all 3.4-1build1 [9544 B] Get:71 http://ftpmaster.internal/ubuntu lunar/main ppc64el libsemanage2 ppc64el 3.4-1build1 [113 kB] Get:72 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libjson-c5 ppc64el 0.16-2 [38.3 kB] Get:73 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el readline-common all 8.2-1.1 [55.1 kB] Get:74 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libreadline8 ppc64el 8.2-1.1 [175 kB] Get:75 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libsqlite3-0 ppc64el 3.39.4-1 [748 kB] Get:76 http://ftpmaster.internal/ubuntu lunar/main ppc64el tzdata all 2022f-0ubuntu1 [400 kB] Get:77 http://ftpmaster.internal/ubuntu lunar/main ppc64el libpng16-16 ppc64el 1.6.38-2 [237 kB] Get:78 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el xz-utils ppc64el 5.2.7-0.1 [149 kB] Get:79 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libfakeroot ppc64el 1.30.1-1ubuntu1 [32.9 kB] Get:80 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el fakeroot ppc64el 1.30.1-1ubuntu1 [62.1 kB] Get:81 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libassuan0 ppc64el 2.5.5-5 [41.3 kB] Get:82 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el gpg ppc64el 2.2.40-1ubuntu1 [646 kB] Get:83 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el gpgconf ppc64el 2.2.40-1ubuntu1 [104 kB] Get:84 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el gpg-agent ppc64el 2.2.40-1ubuntu1 [253 kB] Get:85 http://ftpmaster.internal/ubuntu lunar/main ppc64el lto-disabled-list all 35 [12.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 89.6 MB in 50s (1788 kB/s) (Reading database ... 13509 files and directories currently installed.) 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Current default time zone: 'Etc/UTC' Local time is now: Sun Nov 6 15:58:02 UTC 2022. Universal Time is now: Sun Nov 6 15:58:02 UTC 2022. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.30.1-1ubuntu1) ... Setting up perl-modules-5.36 (5.36.0-4ubuntu2) ... Setting up xz-utils (5.2.7-0.1) ... Setting up libquadmath0:ppc64el (12.2.0-9ubuntu1) ... Setting up libpng16-16:ppc64el (1.6.38-2) ... Setting up libatomic1:ppc64el (12.2.0-9ubuntu1) ... Setting up libubsan1:ppc64el (12.2.0-9ubuntu1) ... Setting up libcrypt-dev:ppc64el (1:4.4.30-1) ... Setting up libasan8:ppc64el (12.2.0-9ubuntu1) ... Setting up sgml-base (1.31) ... Setting up libtsan2:ppc64el (12.2.0-9ubuntu1) ... Setting up libbinutils:ppc64el (2.39-8ubuntu2) ... Setting up libc-dev-bin (2.36-0ubuntu4) ... Setting up libjson-c5:ppc64el (0.16-2) ... Setting up readline-common (8.2-1.1) ... Setting up libcc1-0:ppc64el (12.2.0-9ubuntu1) ... Setting up liblsan0:ppc64el (12.2.0-9ubuntu1) ... 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RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-24626370 ppc64el lunar-proposed -c chroot:build-PACKAGEBUILD-24626370 --arch=ppc64el --dist=lunar-proposed --nolog igor_1.4.0+dfsg-4.dsc Initiating build PACKAGEBUILD-24626370 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-131-generic #147-Ubuntu SMP Fri Oct 14 17:08:20 UTC 2022 ppc64le sbuild (Debian sbuild) 0.79.0 (05 February 2020) on bos02-ppc64el-006.buildd +==============================================================================+ | igor 1.4.0+dfsg-4 (ppc64el) Sun, 06 Nov 2022 15:58:03 +0000 | +==============================================================================+ Package: igor Version: 1.4.0+dfsg-4 Source Version: 1.4.0+dfsg-4 Distribution: lunar-proposed Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-24626370/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/igor-3eQRBE/resolver-4jxjy8' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- igor_1.4.0+dfsg-4.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/igor-3eQRBE/igor-1.4.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/igor-3eQRBE' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libjemalloc-dev, libgsl-dev, libblas-dev | libblas.so, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), libjemalloc-dev, libgsl-dev, libblas-dev | libblas.so, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [398 B] Get:5 copy:/<>/apt_archive ./ Packages [483 B] Fetched 1838 B in 0s (171 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.34 perl-modules-5.34 sgml-base Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas-dev libblas3 libdebhelper-perl libdw1 libelf1 libfile-stripnondeterminism-perl libgsl-dev libgsl27 libgslcblas0 libicu71 libjemalloc-dev libjemalloc2 libmagic-mgc libmagic1 libpipeline1 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff liblapack-doc gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas-dev libblas3 libdebhelper-perl libdw1 libelf1 libfile-stripnondeterminism-perl libgsl-dev libgsl27 libgslcblas0 libicu71 libjemalloc-dev libjemalloc2 libmagic-mgc libmagic1 libpipeline1 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf sbuild-build-depends-main-dummy 0 upgraded, 39 newly installed, 0 to remove and 0 not upgraded. Need to get 23.8 MB of archives. After this operation, 93.2 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [696 B] Get:2 http://ftpmaster.internal/ubuntu lunar/main ppc64el libelf1 ppc64el 0.187-4 [60.8 kB] Get:3 http://ftpmaster.internal/ubuntu lunar/main ppc64el libicu71 ppc64el 71.1-3ubuntu1 [10.9 MB] Get:4 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libxml2 ppc64el 2.9.14+dfsg-1.1 [820 kB] Get:5 http://ftpmaster.internal/ubuntu lunar/main ppc64el bsdextrautils ppc64el 2.38-4ubuntu1 [77.3 kB] Get:6 http://ftpmaster.internal/ubuntu lunar/main ppc64el libmagic-mgc ppc64el 1:5.41-4 [257 kB] Get:7 http://ftpmaster.internal/ubuntu lunar/main ppc64el libmagic1 ppc64el 1:5.41-4 [103 kB] Get:8 http://ftpmaster.internal/ubuntu lunar/main ppc64el file ppc64el 1:5.41-4 [22.6 kB] Get:9 http://ftpmaster.internal/ubuntu lunar/main ppc64el gettext-base ppc64el 0.21-8 [42.0 kB] Get:10 http://ftpmaster.internal/ubuntu lunar/main ppc64el libuchardet0 ppc64el 0.0.7-1build2 [80.4 kB] Get:11 http://ftpmaster.internal/ubuntu lunar/main ppc64el groff-base ppc64el 1.22.4-8build1 [1031 kB] Get:12 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libpipeline1 ppc64el 1.5.6-3 [25.9 kB] Get:13 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el man-db ppc64el 2.11.0-1 [1220 kB] Get:14 http://ftpmaster.internal/ubuntu lunar/main ppc64el m4 ppc64el 1.4.19-1 [275 kB] Get:15 http://ftpmaster.internal/ubuntu lunar/main ppc64el autoconf all 2.71-2 [338 kB] Get:16 http://ftpmaster.internal/ubuntu lunar/main ppc64el autotools-dev all 20220109.1 [44.9 kB] Get:17 http://ftpmaster.internal/ubuntu lunar/main ppc64el automake all 1:1.16.5-1.3 [558 kB] Get:18 http://ftpmaster.internal/ubuntu lunar/main ppc64el autopoint all 0.21-8 [421 kB] Get:19 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libdebhelper-perl all 13.10.1ubuntu1 [67.1 kB] Get:20 http://ftpmaster.internal/ubuntu lunar/main ppc64el libtool all 2.4.7-4 [166 kB] Get:21 http://ftpmaster.internal/ubuntu lunar/main ppc64el dh-autoreconf all 20 [16.1 kB] Get:22 http://ftpmaster.internal/ubuntu lunar/main ppc64el libarchive-zip-perl all 1.68-1 [90.2 kB] Get:23 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el libsub-override-perl all 0.09-4 [8706 B] Get:24 http://ftpmaster.internal/ubuntu lunar/main ppc64el libfile-stripnondeterminism-perl all 1.13.0-1 [18.1 kB] Get:25 http://ftpmaster.internal/ubuntu lunar/main ppc64el dh-strip-nondeterminism all 1.13.0-1 [5344 B] Get:26 http://ftpmaster.internal/ubuntu lunar/main ppc64el libdw1 ppc64el 0.187-4 [280 kB] Get:27 http://ftpmaster.internal/ubuntu lunar/main ppc64el debugedit ppc64el 1:5.0-5 [51.1 kB] Get:28 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el dwz ppc64el 0.14+20220924-2 [139 kB] Get:29 http://ftpmaster.internal/ubuntu lunar/main ppc64el gettext ppc64el 0.21-8 [970 kB] Get:30 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:31 http://ftpmaster.internal/ubuntu lunar/main ppc64el po-debconf all 1.0.21+nmu1 [233 kB] Get:32 http://ftpmaster.internal/ubuntu lunar-proposed/main ppc64el debhelper all 13.10.1ubuntu1 [924 kB] Get:33 http://ftpmaster.internal/ubuntu lunar/main ppc64el libblas3 ppc64el 3.10.1-2 [204 kB] Get:34 http://ftpmaster.internal/ubuntu lunar/main ppc64el libblas-dev ppc64el 3.10.1-2 [275 kB] Get:35 http://ftpmaster.internal/ubuntu lunar/universe ppc64el libgslcblas0 ppc64el 2.7.1+dfsg-3 [247 kB] Get:36 http://ftpmaster.internal/ubuntu lunar/universe ppc64el libgsl27 ppc64el 2.7.1+dfsg-3 [1315 kB] Get:37 http://ftpmaster.internal/ubuntu lunar/universe ppc64el libgsl-dev ppc64el 2.7.1+dfsg-3 [1825 kB] Get:38 http://ftpmaster.internal/ubuntu lunar/universe ppc64el libjemalloc2 ppc64el 5.2.1-5 [209 kB] Get:39 http://ftpmaster.internal/ubuntu lunar/universe ppc64el libjemalloc-dev ppc64el 5.2.1-5 [388 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 23.8 MB in 19s (1261 kB/s) Selecting previously unselected package libelf1:ppc64el. (Reading database ... 15478 files and directories currently installed.) Preparing to unpack .../00-libelf1_0.187-4_ppc64el.deb ... Unpacking libelf1:ppc64el (0.187-4) ... Selecting previously unselected package libicu71:ppc64el. Preparing to unpack .../01-libicu71_71.1-3ubuntu1_ppc64el.deb ... Unpacking libicu71:ppc64el (71.1-3ubuntu1) ... Selecting previously unselected package libxml2:ppc64el. Preparing to unpack .../02-libxml2_2.9.14+dfsg-1.1_ppc64el.deb ... Unpacking libxml2:ppc64el (2.9.14+dfsg-1.1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../03-bsdextrautils_2.38-4ubuntu1_ppc64el.deb ... Unpacking bsdextrautils (2.38-4ubuntu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../04-libmagic-mgc_1%3a5.41-4_ppc64el.deb ... Unpacking libmagic-mgc (1:5.41-4) ... Selecting previously unselected package libmagic1:ppc64el. Preparing to unpack .../05-libmagic1_1%3a5.41-4_ppc64el.deb ... Unpacking libmagic1:ppc64el (1:5.41-4) ... Selecting previously unselected package file. Preparing to unpack .../06-file_1%3a5.41-4_ppc64el.deb ... Unpacking file (1:5.41-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../07-gettext-base_0.21-8_ppc64el.deb ... Unpacking gettext-base (0.21-8) ... Selecting previously unselected package libuchardet0:ppc64el. Preparing to unpack .../08-libuchardet0_0.0.7-1build2_ppc64el.deb ... Unpacking libuchardet0:ppc64el (0.0.7-1build2) ... Selecting previously unselected package groff-base. Preparing to unpack .../09-groff-base_1.22.4-8build1_ppc64el.deb ... Unpacking groff-base (1.22.4-8build1) ... Selecting previously unselected package libpipeline1:ppc64el. Preparing to unpack .../10-libpipeline1_1.5.6-3_ppc64el.deb ... Unpacking libpipeline1:ppc64el (1.5.6-3) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.11.0-1_ppc64el.deb ... Unpacking man-db (2.11.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-1_ppc64el.deb ... Unpacking m4 (1.4.19-1) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.71-2_all.deb ... Unpacking autoconf (2.71-2) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.21-8_all.deb ... Unpacking autopoint (0.21-8) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../17-libdebhelper-perl_13.10.1ubuntu1_all.deb ... Unpacking libdebhelper-perl (13.10.1ubuntu1) ... Selecting previously unselected package libtool. Preparing to unpack .../18-libtool_2.4.7-4_all.deb ... 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Unpacking debhelper (13.10.1ubuntu1) ... Selecting previously unselected package libblas3:ppc64el. Preparing to unpack .../31-libblas3_3.10.1-2_ppc64el.deb ... Unpacking libblas3:ppc64el (3.10.1-2) ... Selecting previously unselected package libblas-dev:ppc64el. Preparing to unpack .../32-libblas-dev_3.10.1-2_ppc64el.deb ... Unpacking libblas-dev:ppc64el (3.10.1-2) ... Selecting previously unselected package libgslcblas0:ppc64el. Preparing to unpack .../33-libgslcblas0_2.7.1+dfsg-3_ppc64el.deb ... Unpacking libgslcblas0:ppc64el (2.7.1+dfsg-3) ... Selecting previously unselected package libgsl27:ppc64el. Preparing to unpack .../34-libgsl27_2.7.1+dfsg-3_ppc64el.deb ... Unpacking libgsl27:ppc64el (2.7.1+dfsg-3) ... Selecting previously unselected package libgsl-dev. Preparing to unpack .../35-libgsl-dev_2.7.1+dfsg-3_ppc64el.deb ... Unpacking libgsl-dev (2.7.1+dfsg-3) ... Selecting previously unselected package libjemalloc2:ppc64el. Preparing to unpack .../36-libjemalloc2_5.2.1-5_ppc64el.deb ... Unpacking libjemalloc2:ppc64el (5.2.1-5) ... Selecting previously unselected package libjemalloc-dev. Preparing to unpack .../37-libjemalloc-dev_5.2.1-5_ppc64el.deb ... Unpacking libjemalloc-dev (5.2.1-5) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../38-sbuild-build-depends-main-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libpipeline1:ppc64el (1.5.6-3) ... Setting up libicu71:ppc64el (71.1-3ubuntu1) ... Setting up bsdextrautils (2.38-4ubuntu1) ... Setting up libgslcblas0:ppc64el (2.7.1+dfsg-3) ... Setting up libmagic-mgc (1:5.41-4) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.10.1ubuntu1) ... Setting up libmagic1:ppc64el (1:5.41-4) ... Setting up gettext-base (0.21-8) ... Setting up libgsl27:ppc64el (2.7.1+dfsg-3) ... Setting up m4 (1.4.19-1) ... Setting up file (1:5.41-4) ... Setting up libjemalloc2:ppc64el (5.2.1-5) ... Setting up libjemalloc-dev (5.2.1-5) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:ppc64el (3.10.1-2) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode Setting up autopoint (0.21-8) ... Setting up autoconf (2.71-2) ... Setting up libuchardet0:ppc64el (0.0.7-1build2) ... Setting up libsub-override-perl (0.09-4) ... Setting up libelf1:ppc64el (0.187-4) ... Setting up libxml2:ppc64el (2.9.14+dfsg-1.1) ... Setting up libblas-dev:ppc64el (3.10.1-2) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so to provide /usr/lib/powerpc64le-linux-gnu/libblas.so (libblas.so-powerpc64le-linux-gnu) in auto mode Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.0-1) ... Setting up libdw1:ppc64el (0.187-4) ... Setting up gettext (0.21-8) ... Setting up libgsl-dev (2.7.1+dfsg-3) ... Setting up libtool (2.4.7-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up dwz (0.14+20220924-2) ... Setting up groff-base (1.22.4-8build1) ... Setting up debugedit (1:5.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up debhelper (13.10.1ubuntu1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.36-0ubuntu4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-131-generic #147-Ubuntu SMP Fri Oct 14 17:08:20 UTC 2022 ppc64el (ppc64le) Toolchain package versions: binutils_2.39-8ubuntu2 dpkg-dev_1.21.9ubuntu1 g++-12_12.2.0-9ubuntu1 gcc-12_12.2.0-9ubuntu1 libc6-dev_2.36-0ubuntu4 libstdc++-12-dev_12.2.0-9ubuntu1 libstdc++6_12.2.0-9ubuntu1 linux-libc-dev_5.19.0-23.24 Package versions: adduser_3.121ubuntu1 advancecomp_2.3-1 apt_2.5.4 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-8 autotools-dev_20220109.1 base-files_12.3ubuntu1 base-passwd_3.6.1 bash_5.2-1ubuntu2 binutils_2.39-8ubuntu2 binutils-common_2.39-8ubuntu2 binutils-powerpc64le-linux-gnu_2.39-8ubuntu2 bsdextrautils_2.38-4ubuntu1 bsdutils_1:2.38-4ubuntu1 build-essential_12.9ubuntu3 bzip2_1.0.8-5build1 ca-certificates_20211016 coreutils_8.32-4.1ubuntu1 cpp_4:12.2.0-1ubuntu1 cpp-12_12.2.0-9ubuntu1 dash_0.5.11+git20210903+057cd650a4ed-8ubuntu1 debconf_1.5.79ubuntu1 debhelper_13.10.1ubuntu1 debianutils_5.7-0.4 debugedit_1:5.0-5 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-1 dpkg_1.21.9ubuntu1 dpkg-dev_1.21.9ubuntu1 dwz_0.14+20220924-2 e2fsprogs_1.46.5-2ubuntu2 fakeroot_1.30.1-1ubuntu1 file_1:5.41-4 findutils_4.9.0-3ubuntu1 g++_4:12.2.0-1ubuntu1 g++-12_12.2.0-9ubuntu1 gcc_4:12.2.0-1ubuntu1 gcc-12_12.2.0-9ubuntu1 gcc-12-base_12.2.0-9ubuntu1 gettext_0.21-8 gettext-base_0.21-8 gpg_2.2.40-1ubuntu1 gpg-agent_2.2.40-1ubuntu1 gpgconf_2.2.40-1ubuntu1 gpgv_2.2.40-1ubuntu1 grep_3.8-3 groff-base_1.22.4-8build1 gzip_1.12-1ubuntu1 hostname_3.23ubuntu2 init_1.65.2 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-1 libapparmor1_3.0.7-1ubuntu3 libapt-pkg6.0_2.5.4 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.3 libasan8_12.2.0-9ubuntu1 libassuan0_2.5.5-5 libatomic1_12.2.0-9ubuntu1 libattr1_1:2.5.1-1build1 libaudit-common_1:3.0.7-1ubuntu2 libaudit1_1:3.0.7-1ubuntu2 libbinutils_2.39-8ubuntu2 libblas-dev_3.10.1-2 libblas3_3.10.1-2 libblkid1_2.38-4ubuntu1 libbz2-1.0_1.0.8-5build1 libc-bin_2.36-0ubuntu4 libc-dev-bin_2.36-0ubuntu4 libc6_2.36-0ubuntu4 libc6-dev_2.36-0ubuntu4 libcap-ng0_0.8.3-1build1 libcap2_1:2.44-1build3 libcc1-0_12.2.0-9ubuntu1 libcom-err2_1.46.5-2ubuntu2 libcrypt-dev_1:4.4.30-1 libcrypt1_1:4.4.30-1 libcryptsetup12_2:2.5.0-2ubuntu1 libctf-nobfd0_2.39-8ubuntu2 libctf0_2.39-8ubuntu2 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.264ubuntu1 libdebhelper-perl_13.10.1ubuntu1 libdevmapper1.02.1_2:1.02.185-1ubuntu1 libdpkg-perl_1.21.9ubuntu1 libdw1_0.187-4 libelf1_0.187-4 libext2fs2_1.46.5-2ubuntu2 libfakeroot_1.30.1-1ubuntu1 libfdisk1_2.38-4ubuntu1 libffi8_3.4.4-1 libfile-stripnondeterminism-perl_1.13.0-1 libgcc-12-dev_12.2.0-9ubuntu1 libgcc-s1_12.2.0-9ubuntu1 libgcrypt20_1.10.1-2ubuntu1 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1ubuntu2 libgnutls30_3.7.7-2ubuntu2 libgomp1_12.2.0-9ubuntu1 libgpg-error0_1.46-1 libgsl-dev_2.7.1+dfsg-3 libgsl27_2.7.1+dfsg-3 libgslcblas0_2.7.1+dfsg-3 libgssapi-krb5-2_1.20-1 libhogweed6_3.8.1-2 libicu71_71.1-3ubuntu1 libidn2-0_2.3.3-1build1 libip4tc2_1.8.7-1ubuntu6 libisl23_0.25-1 libitm1_12.2.0-9ubuntu1 libjemalloc-dev_5.2.1-5 libjemalloc2_5.2.1-5 libjson-c5_0.16-2 libk5crypto3_1.20-1 libkeyutils1_1.6.3-1 libkmod2_30+20220630-3ubuntu1 libkrb5-3_1.20-1 libkrb5support0_1.20-1 liblockfile-bin_1.17-1build2 liblockfile1_1.17-1build2 liblsan0_12.2.0-9ubuntu1 liblz4-1_1.9.4-1 liblzma5_5.2.7-0.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmount1_2.38-4ubuntu1 libmpc3_1.2.1-2build1 libmpfr6_4.1.0-3build3 libncurses6_6.3+20220423-2 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnpth0_1.6-3build2 libnsl-dev_1.3.0-2build2 libnsl2_1.3.0-2build2 libp11-kit0_0.24.1-1ubuntu2 libpam-modules_1.5.2-2ubuntu1 libpam-modules-bin_1.5.2-2ubuntu1 libpam-runtime_1.5.2-2ubuntu1 libpam0g_1.5.2-2ubuntu1 libpcre2-8-0_10.40-1ubuntu1 libpcre3_2:8.39-14 libperl5.34_5.34.0-5ubuntu1 libperl5.36_5.36.0-4ubuntu2 libpipeline1_1.5.6-3 libpng16-16_1.6.38-2 libprocps8_2:3.3.17-7ubuntu1 libquadmath0_12.2.0-9ubuntu1 libreadline8_8.2-1.1 libseccomp2_2.5.4-1ubuntu2 libselinux1_3.4-1build1 libsemanage-common_3.4-1build1 libsemanage2_3.4-1build1 libsepol2_3.4-2 libsmartcols1_2.38-4ubuntu1 libsqlite3-0_3.39.4-1 libss2_1.46.5-2ubuntu2 libssl3_3.0.5-2ubuntu1 libstdc++-12-dev_12.2.0-9ubuntu1 libstdc++6_12.2.0-9ubuntu1 libsub-override-perl_0.09-4 libsystemd-shared_251.4-1ubuntu7 libsystemd0_251.4-1ubuntu7 libtasn1-6_4.19.0-2 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-4 libtsan2_12.2.0-9ubuntu1 libubsan1_12.2.0-9ubuntu1 libuchardet0_0.0.7-1build2 libudev1_251.4-1ubuntu7 libunistring2_1.0-2 libuuid1_2.38-4ubuntu1 libxml2_2.9.14+dfsg-1.1 libxxhash0_0.8.1-1 libzstd1_1.5.2+dfsg-1 linux-libc-dev_5.19.0-23.24 lockfile-progs_0.1.19build1 login_1:4.11.1+dfsg1-2ubuntu1 logsave_1.46.5-2ubuntu2 lsb-base_11.2ubuntu1 lto-disabled-list_35 m4_1.4.19-1 make_4.3-4.1build1 man-db_2.11.0-1 mawk_1.3.4.20200120-3.1 mount_2.38-4ubuntu1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 openssl_3.0.5-2ubuntu1 optipng_0.7.7-2build1 passwd_1:4.11.1+dfsg1-2ubuntu1 patch_2.7.6-7build2 perl_5.36.0-4ubuntu2 perl-base_5.36.0-4ubuntu2 perl-modules-5.34_5.34.0-5ubuntu1 perl-modules-5.36_5.36.0-4ubuntu2 pinentry-curses_1.2.0-2ubuntu1 pkgbinarymangler_149 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3.1 procps_2:3.3.17-7ubuntu1 readline-common_8.2-1.1 rpcsvc-proto_1.4.2-0ubuntu6 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1ubuntu2 sensible-utils_0.0.17 sgml-base_1.31 systemd_251.4-1ubuntu7 systemd-sysv_251.4-1ubuntu7 sysvinit-utils_3.04-1ubuntu1 tar_1.34+dfsg-1build3 tzdata_2022f-0ubuntu1 ubuntu-keyring_2021.03.26 usrmerge_29ubuntu2 util-linux_2.38-4ubuntu1 util-linux-extra_2.38-4ubuntu1 xz-utils_5.2.7-0.1 zlib1g_1:1.2.11.dfsg-4.1ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: igor Binary: igor Architecture: any Version: 1.4.0+dfsg-4 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/qmarcou/IGoR/ Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/igor Vcs-Git: https://salsa.debian.org/med-team/igor.git Testsuite: autopkgtest Testsuite-Triggers: build-essential Build-Depends: debhelper-compat (= 13), libjemalloc-dev, libgsl-dev, libblas-dev | libblas.so Package-List: igor deb science optional arch=any Checksums-Sha1: 6d4cc77c4c4a6ecdf75a5c1eee86f1e8bc1c62eb 1001484 igor_1.4.0+dfsg.orig.tar.xz 5003386f85287f87d50662fcfb3fe96b9ae0102d 5200 igor_1.4.0+dfsg-4.debian.tar.xz Checksums-Sha256: eebf01e469bdcc5147d50b355d5c7890e6f4b6254596078a051f5db57cdc9449 1001484 igor_1.4.0+dfsg.orig.tar.xz 951c0b83d26b3499481797a85462b52c941b1bb5e3026427744e9a20ac595dfc 5200 igor_1.4.0+dfsg-4.debian.tar.xz Files: 272f7e96c7aadd4791679d31dadf0f6f 1001484 igor_1.4.0+dfsg.orig.tar.xz 245d7f388afd522f707a0e8cd00b4869 5200 igor_1.4.0+dfsg-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmNmvlARHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEziRAAmlup9P+gyEF+tnH+vOWYMjU03QoRt/HA wtmzW/gKUcZnv0l7D9alV+5E8IZ8nzd+wO4YaaERrjUrEOom2d5CpUbMUW5N4ZaK olTm8WVyNLRiMK3sr/Pvuq7AkuZbYFfgnWEl7hZVsvyRuLXrPv6ShdjJNJk13Pge JVc3Uj2yp4Mbb7V5Osept2T2pK30wIb1cdeHceVSDHp++hEKY1wURX6w3akC9dir 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applying get_autoreconf_to_work.patch dpkg-source: info: applying inline_fix.patch dpkg-source: info: applying fix-gcc-10.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-24626370 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-24626370 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-24626370 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package igor dpkg-buildpackage: info: source version 1.4.0+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean rm -rf docs/latex rm -rf docs/html rm -rf config.guess config.sub make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:14: installing './compile' configure.ac:14: installing './config.guess' configure.ac:14: installing './config.sub' configure.ac:7: installing './install-sh' configure.ac:7: installing './missing' igor_src/Makefile.am: installing './depcomp' dh_auto_configure -a ./configure --build=powerpc64le-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/powerpc64le-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... powerpc64le-unknown-linux-gnu checking host system type... powerpc64le-unknown-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert powerpc64le-unknown-linux-gnu file names to powerpc64le-unknown-linux-gnu format... func_convert_file_noop checking how to convert powerpc64le-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gcc... (cached) gcc checking whether the compiler supports GNU C... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to enable C11 features... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) none checking whether g++ supports C++11 features by default... yes checking for g++ option to support OpenMP... -fopenmp checking for _Bool... no checking for stdbool.h that conforms to C99... yes checking for inline... inline checking for size_t... yes checking for pow... yes checking for sqrt... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating igor_src/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands === configuring in igor_src (/<>/igor_src) configure: WARNING: no configuration information is in igor_src dh_auto_build -a make -j4 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in igor_src make[3]: Entering directory '/<>/igor_src' g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Aligner.o `test -f 'Aligner.cpp' || echo './'`Aligner.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Bestscenarioscounter.o `test -f 'Bestscenarioscounter.cpp' || echo './'`Bestscenarioscounter.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-CDR3SeqData.o `test -f 'CDR3SeqData.cpp' || echo './'`CDR3SeqData.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Counter.o `test -f 'Counter.cpp' || echo './'`Counter.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Coverageerrcounter.o `test -f 'Coverageerrcounter.cpp' || echo './'`Coverageerrcounter.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Deletion.o `test -f 'Deletion.cpp' || echo './'`Deletion.cpp Deletion.cpp:1590:44: warning: multi-character character constant [-Wmultichar] 1590 | else if ((*iter)=='14'){ | ^~~~ Deletion.cpp: In member function ‘virtual void Deletion::iterate(double&, Downstream_scenario_proba_bound_map&, const std::string&, const Int_Str&, Index_map&, const std::unordered_map, std::vector, int> > >&, std::shared_ptr&, Marginal_array_p&, const Marginal_array_p&, const std::unordered_map >&, Seq_type_str_p_map&, Seq_offsets_map&, std::shared_ptr&, std::map >&, const std::unordered_map, std::shared_ptr >&, Safety_bool_map&, Mismatch_vectors_map&, double&, double&)’: Deletion.cpp:909:98: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 909 | throw invalid_argument("Unknown side for D deletion: " + (*this).event_side); //TODO explicitly throw the side used | ^~~~~~~~~~ Deletion.cpp:909:98: note: candidate 1: ‘operator+(const char*, long int)’ (built-in) In file included from Errorrate.h:29, from Rec_Event.h:38, from Deletion.h:29, from Deletion.cpp:26: Utils.h:69:13: note: candidate 2: ‘std::string operator+(const std::string&, Seq_side)’ 69 | std::string operator+(const std::string& , Seq_side ); | ^~~~~~~~ Deletion.cpp:1173:88: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 1173 | throw invalid_argument("Unknown gene for deletions : " + this->event_class); | ^~~~~~~~~~~ Deletion.cpp:1173:88: note: candidate 1: ‘operator+(const char*, long int)’ (built-in) Utils.h:68:13: note: candidate 2: ‘std::string operator+(const std::string&, Gene_class)’ 68 | std::string operator+(const std::string& , Gene_class ); | ^~~~~~~~ Deletion.cpp: In member function ‘virtual bool Deletion::has_effect_on(Seq_type) const’: Deletion.cpp:1705:2: warning: control reaches end of non-void function [-Wreturn-type] 1705 | } | ^ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Dinuclmarkov.o `test -f 'Dinuclmarkov.cpp' || echo './'`Dinuclmarkov.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Errorscounter.o `test -f 'Errorscounter.cpp' || echo './'`Errorscounter.cpp Dinuclmarkov.cpp: In member function ‘virtual void Dinucl_markov::iterate(double&, Downstream_scenario_proba_bound_map&, const std::string&, const Int_Str&, Index_map&, const std::unordered_map, std::vector, int> > >&, std::shared_ptr&, Marginal_array_p&, const Marginal_array_p&, const std::unordered_map >&, Seq_type_str_p_map&, Seq_offsets_map&, std::shared_ptr&, std::map >&, const std::unordered_map, std::shared_ptr >&, Safety_bool_map&, Mismatch_vectors_map&, double&, double&)’: Dinuclmarkov.cpp:147:95: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 147 | throw invalid_argument("Unknown gene class for DincuclMarkov model: " + this->event_class); | ^~~~~~~~~~~ Dinuclmarkov.cpp:147:95: note: candidate 1: ‘operator+(const char*, long int)’ (built-in) In file included from Errorrate.h:29, from Rec_Event.h:38, from Dinuclmarkov.h:32, from Dinuclmarkov.cpp:26: Utils.h:68:13: note: candidate 2: ‘std::string operator+(const std::string&, Gene_class)’ 68 | std::string operator+(const std::string& , Gene_class ); | ^~~~~~~~ Dinuclmarkov.cpp: In member function ‘virtual std::queue Dinucl_markov::draw_random_realization(const Marginal_array_p&, std::unordered_map, int>&, const std::unordered_map, std::vector, int> > >&, std::unordered_map >&, std::mt19937_64&) const’: Dinuclmarkov.cpp:211:95: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 211 | throw invalid_argument("Unknown gene class for DincuclMarkov model: " + this->event_class); | ^~~~~~~~~~~ Dinuclmarkov.cpp:211:95: note: candidate 1: ‘operator+(const char*, long int)’ (built-in) Utils.h:68:13: note: candidate 2: ‘std::string operator+(const std::string&, Gene_class)’ 68 | std::string operator+(const std::string& , Gene_class ); | ^~~~~~~~ Dinuclmarkov.cpp: In member function ‘virtual void Dinucl_markov::iterate_initialize_Len_proba(Seq_type, std::map&, std::queue >&, double&, const Marginal_array_p&, Index_map&, Seq_type_str_p_map&, int&) const’: Dinuclmarkov.cpp:565:95: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 565 | throw invalid_argument("Unknown gene class for DincuclMarkov model: " + this->event_class); | ^~~~~~~~~~~ Dinuclmarkov.cpp:565:95: note: candidate 1: ‘operator+(const char*, long int)’ (built-in) Utils.h:68:13: note: candidate 2: ‘std::string operator+(const std::string&, Gene_class)’ 68 | std::string operator+(const std::string& , Gene_class ); | ^~~~~~~~ Utils.h: In member function ‘Matrix& Matrix::operator=(const Matrix&) [with T = double]’: Utils.h:142:9: warning: control reaches end of non-void function [-Wreturn-type] 142 | } | ^ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Errorrate.o `test -f 'Errorrate.cpp' || echo './'`Errorrate.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-ExtractFeatures.o `test -f 'ExtractFeatures.cpp' || echo './'`ExtractFeatures.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Genechoice.o `test -f 'Genechoice.cpp' || echo './'`Genechoice.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-GenModel.o `test -f 'GenModel.cpp' || echo './'`GenModel.cpp Genechoice.cpp: In member function ‘virtual void Gene_choice::iterate(double&, Downstream_scenario_proba_bound_map&, const std::string&, const Int_Str&, Index_map&, const std::unordered_map, std::vector, int> > >&, std::shared_ptr&, Marginal_array_p&, const Marginal_array_p&, const std::unordered_map >&, Seq_type_str_p_map&, Seq_offsets_map&, std::shared_ptr&, std::map >&, const std::unordered_map, std::shared_ptr >&, Safety_bool_map&, Mismatch_vectors_map&, double&, double&)’: Genechoice.cpp:908:94: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 908 | throw invalid_argument("Unknown gene_class for GeneChoice: " + this->event_class); | ^~~~~~~~~~~ Genechoice.cpp:908:94: note: candidate 1: ‘operator+(const char*, long int)’ (built-in) In file included from Errorrate.h:29, from Rec_Event.h:38, from Genechoice.h:29, from Genechoice.cpp:26: Utils.h:68:13: note: candidate 2: ‘std::string operator+(const std::string&, Gene_class)’ 68 | std::string operator+(const std::string& , Gene_class ); | ^~~~~~~~ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-HypermutationfullNmererrorrate.o `test -f 'HypermutationfullNmererrorrate.cpp' || echo './'`HypermutationfullNmererrorrate.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Hypermutationglobalerrorrate.o `test -f 'Hypermutationglobalerrorrate.cpp' || echo './'`Hypermutationglobalerrorrate.cpp In file included from Errorrate.h:29, from HypermutationfullNmererrorrate.h:30, from HypermutationfullNmererrorrate.cpp:27: Utils.h: In member function ‘Matrix& Matrix::operator=(const Matrix&) [with T = double]’: Utils.h:142:9: warning: control reaches end of non-void function [-Wreturn-type] 142 | } | ^ In file included from Errorrate.h:29, from Hypermutationglobalerrorrate.h:30, from Hypermutationglobalerrorrate.cpp:27: Utils.h: In member function ‘Matrix& Matrix::operator=(const Matrix&) [with T = double]’: Utils.h:142:9: warning: control reaches end of non-void function [-Wreturn-type] 142 | } | ^ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Insertion.o `test -f 'Insertion.cpp' || echo './'`Insertion.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-IntStr.o `test -f 'IntStr.cpp' || echo './'`IntStr.cpp Insertion.cpp: In member function ‘virtual void Insertion::iterate(double&, Downstream_scenario_proba_bound_map&, const std::string&, const Int_Str&, Index_map&, const std::unordered_map, std::vector, int> > >&, std::shared_ptr&, Marginal_array_p&, const Marginal_array_p&, const std::unordered_map >&, Seq_type_str_p_map&, Seq_offsets_map&, std::shared_ptr&, std::map >&, const std::unordered_map, std::shared_ptr >&, Safety_bool_map&, Mismatch_vectors_map&, double&, double&)’: Insertion.cpp:244:93: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 244 | throw invalid_argument("Unknown gene_class for Insertion: " + this->event_class); | ^~~~~~~~~~~ Insertion.cpp:244:93: note: candidate 1: ‘operator+(const char*, long int)’ (built-in) In file included from Errorrate.h:29, from Rec_Event.h:38, from Insertion.h:30, from Insertion.cpp:27: Utils.h:68:13: note: candidate 2: ‘std::string operator+(const std::string&, Gene_class)’ 68 | std::string operator+(const std::string& , Gene_class ); | ^~~~~~~~ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Model_marginals.o `test -f 'Model_marginals.cpp' || echo './'`Model_marginals.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Model_Parms.o `test -f 'Model_Parms.cpp' || echo './'`Model_Parms.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Pgencounter.o `test -f 'Pgencounter.cpp' || echo './'`Pgencounter.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Rec_Event.o `test -f 'Rec_Event.cpp' || echo './'`Rec_Event.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Singleerrorrate.o `test -f 'Singleerrorrate.cpp' || echo './'`Singleerrorrate.cpp In file included from Errorrate.h:29, from Singleerrorrate.h:30, from Singleerrorrate.cpp:27: Utils.h: In member function ‘Matrix& Matrix::operator=(const Matrix&) [with T = double]’: Utils.h:142:9: warning: control reaches end of non-void function [-Wreturn-type] 142 | } | ^ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-Utils.o `test -f 'Utils.cpp' || echo './'`Utils.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -c -o igor-main.o `test -f 'main.cpp' || echo './'`main.cpp main.cpp: In function ‘int main(int, char**)’: main.cpp:257:31: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 257 | system(&("man igor")[0]); | ~~~~~~^~~~~~~~~~~~~~~~~~ main.cpp:289:32: warning: ignoring return value of ‘FILE* freopen(const char*, const char*, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 289 | freopen(argv[++carg_i],"a+",stdout); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:1565:23: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1565 | system(&("mkdir " + cl_path )[0]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:1716:23: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1716 | system(&("mkdir " + cl_path + "run_demo")[0]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:1750:31: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1750 | system(&("mkdir " + cl_path + "aligns")[0]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:2058:31: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2058 | system(&("mkdir " + cl_path + batchname + "output")[0]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:2062:39: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2062 | system(&("mkdir " + cl_path + batchname + "inference")[0]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:2068:39: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2068 | system(&("mkdir " + cl_path + batchname + "evaluate")[0]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:2078:31: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2078 | system(&("mkdir " + cl_path + batchname + "generated")[0]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from Errorrate.h:29, from Rec_Event.h:38, from Deletion.h:29, from main.cpp:28: Utils.h: In member function ‘Matrix& Matrix::operator=(const Matrix&) [with T = double]’: Utils.h:142:9: warning: control reaches end of non-void function [-Wreturn-type] 142 | } | ^ /bin/bash ../libtool --tag=CXX --mode=link g++ -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -o igor igor-Aligner.o igor-Bestscenarioscounter.o igor-CDR3SeqData.o igor-Counter.o igor-Coverageerrcounter.o igor-Deletion.o igor-Dinuclmarkov.o igor-Errorscounter.o igor-Errorrate.o igor-ExtractFeatures.o igor-Genechoice.o igor-GenModel.o igor-HypermutationfullNmererrorrate.o igor-Hypermutationglobalerrorrate.o igor-Insertion.o igor-IntStr.o igor-Model_marginals.o igor-Model_Parms.o igor-Pgencounter.o igor-Rec_Event.o igor-Singleerrorrate.o igor-Utils.o igor-main.o -lgsl -lblas -ljemalloc -lpthread -ldl libtool: link: g++ -I/usr/include/jemalloc -I/usr/include/gsl -fopenmp -DIGOR_DATA_DIR=\"/usr/share/igor\" -g -O3 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -o igor igor-Aligner.o igor-Bestscenarioscounter.o igor-CDR3SeqData.o igor-Counter.o igor-Coverageerrcounter.o igor-Deletion.o igor-Dinuclmarkov.o igor-Errorscounter.o igor-Errorrate.o igor-ExtractFeatures.o igor-Genechoice.o igor-GenModel.o igor-HypermutationfullNmererrorrate.o igor-Hypermutationglobalerrorrate.o igor-Insertion.o igor-IntStr.o igor-Model_marginals.o igor-Model_Parms.o igor-Pgencounter.o igor-Rec_Event.o igor-Singleerrorrate.o igor-Utils.o igor-main.o -lgsl -lblas -ljemalloc -lpthread -ldl -fopenmp make[3]: Leaving directory '/<>/igor_src' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a make -j4 check "TESTSUITEFLAGS=-j4 --verbose" VERBOSE=1 make[1]: Entering directory '/<>' Making check in igor_src make[2]: Entering directory '/<>/igor_src' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/igor_src' make[2]: Entering directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a dh_installdirs -a dh_auto_install --destdir=debian/igor/ -a make -j1 install DESTDIR=/<>/igor-1.4.0\+dfsg/debian/igor AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in igor_src make[2]: Entering directory '/<>/igor_src' make[3]: Entering directory '/<>/igor_src' /usr/bin/mkdir -p '/<>/debian/igor/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c igor '/<>/debian/igor/usr/bin' libtool: install: /usr/bin/install -c igor /<>/debian/igor/usr/bin/igor make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/igor_src' make[2]: Leaving directory '/<>/igor_src' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' /usr/bin/mkdir -p '/<>/debian/igor/usr/bin' /usr/bin/install -c scripts/igor-compute_pgen '/<>/debian/igor/usr/bin' mkdir -p /<>/debian/igor/usr/share/igor/models cp -r models/* /<>/debian/igor/usr/share/igor/models /usr/bin/mkdir -p '/<>/debian/igor/usr/share/igor/demo' /usr/bin/install -c -m 644 demo/genomicVs_with_primers.fasta demo/genomicDs.fasta demo/genomicJs_all_curated.fasta demo/murugan_naive1_noncoding_demo_seqs.txt '/<>/debian/igor/usr/share/igor/demo' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a debian/rules override_dh_installman make[1]: Entering directory '/<>' mv debian/igor1 debian/igor.1 dh_installman make[1]: Leaving directory '/<>' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a debian/rules override_dh_fixperms make[1]: Entering directory '/<>' dh_fixperms find debian -name "*.fasta" -exec chmod -x \{\} \; make[1]: Leaving directory '/<>' dh_missing -a dh_dwz -a dh_strip -a ff56611b781cc3062da794c5bb03e73aad5ae06a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/igor/usr/bin/igor was not linked against libblas.so.3 (it uses none of the library's symbols) dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 149 INFO: pkgstriptranslations version 149 pkgstriptranslations: processing igor (in debian/igor); do_strip: , oemstrip: pkgstriptranslations: processing igor-dbgsym (in debian/.debhelper/igor/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/igor/DEBIAN/control, package igor, directory debian/igor pkgstripfiles: Running PNG optimization (using 4 cpus) for package igor ... pkgstripfiles: No PNG files. pkgstripfiles: processing control file: debian/.debhelper/igor/dbgsym-root/DEBIAN/control, package igor-dbgsym, directory debian/.debhelper/igor/dbgsym-root dpkg-deb: building package 'igor-dbgsym' in 'debian/.debhelper/scratch-space/build-igor/igor-dbgsym_1.4.0+dfsg-4_ppc64el.deb'. dpkg-deb: building package 'igor' in '../igor_1.4.0+dfsg-4_ppc64el.deb'. Renaming igor-dbgsym_1.4.0+dfsg-4_ppc64el.deb to igor-dbgsym_1.4.0+dfsg-4_ppc64el.ddeb dpkg-genbuildinfo --build=any -O../igor_1.4.0+dfsg-4_ppc64el.buildinfo dpkg-genchanges --build=any -mLaunchpad Build Daemon -O../igor_1.4.0+dfsg-4_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-11-06T15:59:32Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ igor_1.4.0+dfsg-4_ppc64el.changes: ---------------------------------- Format: 1.8 Date: Sat, 05 Nov 2022 20:40:47 +0100 Source: igor Binary: igor Built-For-Profiles: noudeb Architecture: ppc64el Version: 1.4.0+dfsg-4 Distribution: lunar-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: igor - infers V(D)J recombination processes from sequencing data Changes: igor (1.4.0+dfsg-4) unstable; urgency=medium . * Team upload. * Fix watch file * Standards-Version: 4.6.1 (routine-update) * lintian-overrides (see lintian bug #1017966) Checksums-Sha1: 9bc55c3832559c2881674a7f75419868942211c2 4881510 igor-dbgsym_1.4.0+dfsg-4_ppc64el.ddeb 162b6bda7b246c958f14683567e3fdb92d5c994a 5823 igor_1.4.0+dfsg-4_ppc64el.buildinfo 1b1c6efc467f5c8f028d25b08a4836da977352ff 582558 igor_1.4.0+dfsg-4_ppc64el.deb Checksums-Sha256: 307aa1598ed256a40f3b2cbbf6662ebc72a3b8f962d13b2f4f6ff7c23a80fd28 4881510 igor-dbgsym_1.4.0+dfsg-4_ppc64el.ddeb 6b6e3d76b33cc64ec3deb81359b7b9ec7ef5d76d585bbaf07497282143a561a9 5823 igor_1.4.0+dfsg-4_ppc64el.buildinfo 042cc67e55b0ab76c75d4ad5a4f14d73a16cf2ff635d22a7f6c1b4b6799b6da2 582558 igor_1.4.0+dfsg-4_ppc64el.deb Files: cad7f646ea87328d42d4a7b2b33faffd 4881510 debug optional igor-dbgsym_1.4.0+dfsg-4_ppc64el.ddeb 5990c680b6c254cd920c54d8cfdaa81f 5823 science optional igor_1.4.0+dfsg-4_ppc64el.buildinfo a792637ae3fe911b961cde571deea9eb 582558 science optional igor_1.4.0+dfsg-4_ppc64el.deb /<>/igor_1.4.0+dfsg-4_ppc64el.changes.new could not be renamed to /<>/igor_1.4.0+dfsg-4_ppc64el.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: igor Binary: igor igor-dbgsym Architecture: ppc64el Version: 1.4.0+dfsg-4 Checksums-Md5: cad7f646ea87328d42d4a7b2b33faffd 4881510 igor-dbgsym_1.4.0+dfsg-4_ppc64el.ddeb a792637ae3fe911b961cde571deea9eb 582558 igor_1.4.0+dfsg-4_ppc64el.deb Checksums-Sha1: 9bc55c3832559c2881674a7f75419868942211c2 4881510 igor-dbgsym_1.4.0+dfsg-4_ppc64el.ddeb 1b1c6efc467f5c8f028d25b08a4836da977352ff 582558 igor_1.4.0+dfsg-4_ppc64el.deb Checksums-Sha256: 307aa1598ed256a40f3b2cbbf6662ebc72a3b8f962d13b2f4f6ff7c23a80fd28 4881510 igor-dbgsym_1.4.0+dfsg-4_ppc64el.ddeb 042cc67e55b0ab76c75d4ad5a4f14d73a16cf2ff635d22a7f6c1b4b6799b6da2 582558 igor_1.4.0+dfsg-4_ppc64el.deb Build-Origin: Ubuntu Build-Architecture: ppc64el Build-Date: Sun, 06 Nov 2022 15:59:31 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.3), autopoint (= 0.21-8), autotools-dev (= 20220109.1), base-files (= 12.3ubuntu1), base-passwd (= 3.6.1), bash (= 5.2-1ubuntu2), binutils (= 2.39-8ubuntu2), binutils-common (= 2.39-8ubuntu2), binutils-powerpc64le-linux-gnu (= 2.39-8ubuntu2), bsdextrautils (= 2.38-4ubuntu1), bsdutils (= 1:2.38-4ubuntu1), build-essential (= 12.9ubuntu3), bzip2 (= 1.0.8-5build1), coreutils (= 8.32-4.1ubuntu1), cpp (= 4:12.2.0-1ubuntu1), cpp-12 (= 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libgssapi-krb5-2 (= 1.20-1), libicu71 (= 71.1-3ubuntu1), libisl23 (= 0.25-1), libitm1 (= 12.2.0-9ubuntu1), libjemalloc-dev (= 5.2.1-5), libjemalloc2 (= 5.2.1-5), libk5crypto3 (= 1.20-1), libkeyutils1 (= 1.6.3-1), libkrb5-3 (= 1.20-1), libkrb5support0 (= 1.20-1), liblsan0 (= 12.2.0-9ubuntu1), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.2.7-0.1), libmagic-mgc (= 1:5.41-4), libmagic1 (= 1:5.41-4), libmount1 (= 2.38-4ubuntu1), libmpc3 (= 1.2.1-2build1), libmpfr6 (= 4.1.0-3build3), libnsl-dev (= 1.3.0-2build2), libnsl2 (= 1.3.0-2build2), libpam-modules (= 1.5.2-2ubuntu1), libpam-modules-bin (= 1.5.2-2ubuntu1), libpam-runtime (= 1.5.2-2ubuntu1), libpam0g (= 1.5.2-2ubuntu1), libpcre2-8-0 (= 10.40-1ubuntu1), libperl5.36 (= 5.36.0-4ubuntu2), libpipeline1 (= 1.5.6-3), libquadmath0 (= 12.2.0-9ubuntu1), libseccomp2 (= 2.5.4-1ubuntu2), libselinux1 (= 3.4-1build1), libsmartcols1 (= 2.38-4ubuntu1), libssl3 (= 3.0.5-2ubuntu1), libstdc++-12-dev (= 12.2.0-9ubuntu1), libstdc++6 (= 12.2.0-9ubuntu1), libsub-override-perl (= 0.09-4), libsystemd0 (= 251.4-1ubuntu7), libtinfo6 (= 6.3+20220423-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-4), libtsan2 (= 12.2.0-9ubuntu1), libubsan1 (= 12.2.0-9ubuntu1), libuchardet0 (= 0.0.7-1build2), libudev1 (= 251.4-1ubuntu7), libunistring2 (= 1.0-2), libuuid1 (= 2.38-4ubuntu1), libxml2 (= 2.9.14+dfsg-1.1), libzstd1 (= 1.5.2+dfsg-1), linux-libc-dev (= 5.19.0-23.24), login (= 1:4.11.1+dfsg1-2ubuntu1), lsb-base (= 11.2ubuntu1), lto-disabled-list (= 35), m4 (= 1.4.19-1), make (= 4.3-4.1build1), man-db (= 2.11.0-1), mawk (= 1.3.4.20200120-3.1), ncurses-base (= 6.3+20220423-2), ncurses-bin (= 6.3+20220423-2), patch (= 2.7.6-7build2), perl (= 5.36.0-4ubuntu2), perl-base (= 5.36.0-4ubuntu2), perl-modules-5.36 (= 5.36.0-4ubuntu2), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.2-0ubuntu6), sed (= 4.8-1ubuntu2), sensible-utils (= 0.0.17), sysvinit-utils (= 3.04-1ubuntu1), tar (= 1.34+dfsg-1build3), usrmerge (= 29ubuntu2), util-linux (= 2.38-4ubuntu1), util-linux-extra (= 2.38-4ubuntu1), xz-utils (= 5.2.7-0.1), zlib1g (= 1:1.2.11.dfsg-4.1ubuntu2) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1667677247" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ igor_1.4.0+dfsg-4_ppc64el.deb ----------------------------- new Debian package, version 2.0. size 582558 bytes: control archive=2473 bytes. 715 bytes, 14 lines control 7512 bytes, 76 lines md5sums Package: igor Version: 1.4.0+dfsg-4 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 2682 Depends: libblas3 | libblas.so.3, libc6 (>= 2.34), libgcc-s1 (>= 4.2), libgomp1 (>= 6), libgsl27 (>= 2.7.1), libjemalloc2 (>= 5.0.0), libstdc++6 (>= 11) Section: science Priority: optional Homepage: https://github.com/qmarcou/IGoR/ Description: infers V(D)J recombination processes from sequencing data IGoR (Inference and Generation of Repertoires) is a versatile software to analyze and model immune receptors generation, selection, mutation and all other processes. drwxr-xr-x root/root 0 2022-11-05 19:40 ./ drwxr-xr-x root/root 0 2022-11-05 19:40 ./usr/ drwxr-xr-x root/root 0 2022-11-05 19:40 ./usr/bin/ -rwxr-xr-x root/root 919760 2022-11-05 19:40 ./usr/bin/igor -rwxr-xr-x root/root 906 2022-11-05 19:40 ./usr/bin/igor-compute_pgen drwxr-xr-x root/root 0 2022-11-05 19:40 ./usr/share/ drwxr-xr-x root/root 0 2022-11-05 19:40 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-11-05 19:40 ./usr/share/doc/igor/ -rw-r--r-- root/root 850 2022-11-05 19:40 ./usr/share/doc/igor/changelog.Debian.gz -rw-r--r-- root/root 1147 2022-11-05 19:40 ./usr/share/doc/igor/copyright drwxr-xr-x root/root 0 2022-11-05 19:40 ./usr/share/doc/igor/examples/ -rw-r--r-- 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./usr/share/igor/models/heavy_pen_substitution_matrix.csv drwxr-xr-x root/root 0 2022-11-05 19:40 ./usr/share/igor/models/human/ drwxr-xr-x root/root 0 2022-11-05 19:40 ./usr/share/igor/models/human/IGK/ drwxr-xr-x root/root 0 2022-11-05 19:40 ./usr/share/igor/models/human/IGK/models/ -rw-r--r-- root/root 18959 2022-11-05 19:40 ./usr/share/igor/models/human/IGK/models/model_marginals.txt -rw-r--r-- root/root 20986 2022-11-05 19:40 ./usr/share/igor/models/human/IGK/models/model_parms.txt drwxr-xr-x root/root 0 2022-11-05 19:40 ./usr/share/igor/models/human/IGK/ref_genome/ -rw-r--r-- root/root 117 2022-11-05 19:40 ./usr/share/igor/models/human/IGK/ref_genome/J_gene_CDR3_anchors.csv -rw-r--r-- root/root 1044 2022-11-05 19:40 ./usr/share/igor/models/human/IGK/ref_genome/V_gene_CDR3_anchors.csv -rw-r--r-- root/root 444 2022-11-05 19:40 ./usr/share/igor/models/human/IGK/ref_genome/genomicJs.fasta -rw-r--r-- root/root 19475 2022-11-05 19:40 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./usr/share/igor/models/mouse/tcr_beta/ref_genome/V_gene_CDR3_anchors.csv -rw-r--r-- root/root 48 2022-11-05 19:40 ./usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicDs.fasta -rw-r--r-- root/root 871 2022-11-05 19:40 ./usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicJs.fasta -rw-r--r-- root/root 10417 2022-11-05 19:40 ./usr/share/igor/models/mouse/tcr_beta/ref_genome/genomicVs.fasta drwxr-xr-x root/root 0 2022-11-05 19:40 ./usr/share/man/ drwxr-xr-x root/root 0 2022-11-05 19:40 ./usr/share/man/man1/ -rw-r--r-- root/root 374 2022-11-05 19:40 ./usr/share/man/man1/igor.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: ppc64el Build Type: any Build-Space: 131936 Build-Time: 65 Distribution: lunar-proposed Host Architecture: ppc64el Install-Time: 22 Job: igor_1.4.0+dfsg-4.dsc Machine Architecture: ppc64el Package: igor Package-Time: 89 Source-Version: 1.4.0+dfsg-4 Space: 131936 Status: successful Version: 1.4.0+dfsg-4 -------------------------------------------------------------------------------- Finished at 2022-11-06T15:59:32Z Build needed 00:01:29, 131936k disk space Adding user buildd to group lxd RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=lunar --arch=ppc64el PACKAGEBUILD-24626370 Scanning for processes to kill in build PACKAGEBUILD-24626370