iva 1.0.8+ds-1 source package in Ubuntu
iva (1.0.8+ds-1) unstable; urgency=medium * New upstream release. * Drop patches applied by upstream. -- Sascha Steinbiss <email address hidden> Thu, 12 Jan 2017 16:10:08 +0100
- diff from 1.0.7+ds-2 to 1.0.8+ds-1 (2.6 KiB)
No changes file available.
Binary packages built by this source
- iva: iterative virus sequence assembler
IVA is a de novo assembler designed to assemble
virus genomes that have no repeat sequences,
using Illumina read pairs sequenced from mixed
populations at extremely high depth.
IVA's main algorithm works by iteratively extending
contigs using aligned read pairs. Its input can be
just read pairs, or additionally you can provide an
existing set of contigs to be extended. Alternatively,
it can take reads together with a reference sequence.