iva 1.0.8+ds-1 source package in Ubuntu


iva (1.0.8+ds-1) unstable; urgency=medium

  * New upstream release.
  * Drop patches applied by upstream.

 -- Sascha Steinbiss <email address hidden>  Thu, 12 Jan 2017 16:10:08 +0100

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Uploaded by:
Debian Med on 2017-01-12
Uploaded to:
Original maintainer:
Debian Med
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Artful release on 2017-04-20 universe misc
Zesty release on 2017-03-31 universe misc


File Size SHA-256 Checksum
iva_1.0.8+ds-1.dsc 2.2 KiB 72ec73c901b1ae96b1052eff518d820713bb847caa0ce3c97f976e3df23d16d0
iva_1.0.8+ds.orig.tar.xz 8.3 MiB c9271aed2bb16e77ccda79c6a964038a89c8ab7ae3d7029e603b9644b08137b4
iva_1.0.8+ds-1.debian.tar.xz 5.7 KiB c669fd8f0893afa75cbd775d2e969ad09feed04ea3a9c24bdcec6c6eef563fee

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Binary packages built by this source

iva: iterative virus sequence assembler

 IVA is a de novo assembler designed to assemble
 virus genomes that have no repeat sequences,
 using Illumina read pairs sequenced from mixed
 populations at extremely high depth.
 IVA's main algorithm works by iteratively extending
 contigs using aligned read pairs. Its input can be
 just read pairs, or additionally you can provide an
 existing set of contigs to be extended. Alternatively,
 it can take reads together with a reference sequence.