https://launchpad.net/ubuntu/+source/ivar/1.2.2+dfsg-3/+build/19467013 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-003 4.4.0-177-generic #207-Ubuntu SMP Mon Mar 16 01:17:51 UTC 2020 aarch64 Buildd toolchain package versions: launchpad-buildd_188 python-lpbuildd_188 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 16 Jun 23:59:28 ntpdate[1881]: adjust time server 10.211.37.1 offset -0.164145 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19467013 --image-type chroot /home/buildd/filecache-default/bb4dbf4bd068f4f4da4a9ba56413a8aa8579df72 Creating target for build PACKAGEBUILD-19467013 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19467013 Starting target for build PACKAGEBUILD-19467013 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19467013 'deb http://ftpmaster.internal/ubuntu groovy main universe' 'deb http://ftpmaster.internal/ubuntu groovy-security main universe' 'deb http://ftpmaster.internal/ubuntu groovy-updates main universe' 'deb http://ftpmaster.internal/ubuntu groovy-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-19467013 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19467013 Updating target for build PACKAGEBUILD-19467013 Get:1 http://ftpmaster.internal/ubuntu groovy InRelease [268 kB] Get:2 http://ftpmaster.internal/ubuntu groovy-security InRelease [89.1 kB] Get:3 http://ftpmaster.internal/ubuntu groovy-updates InRelease [89.1 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed InRelease [119 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main arm64 Packages [943 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main Translation-en [508 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/universe arm64 Packages [8565 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/universe Translation-en [5184 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 Packages [77.6 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main Translation-en [46.7 kB] Get:11 http://ftpmaster.internal/ubuntu groovy-proposed/universe arm64 Packages [828 kB] Get:12 http://ftpmaster.internal/ubuntu groovy-proposed/universe Translation-en [425 kB] Fetched 17.1 MB in 6s (2675 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt base-files binutils binutils-aarch64-linux-gnu binutils-common bsdutils bzip2 ca-certificates cpp-9 dash debconf debianutils dpkg dpkg-dev e2fsprogs fdisk g++-9 gcc-10-base gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv gzip libacl1 libapparmor1 libapt-pkg6.0 libargon2-1 libasan5 libassuan0 libatomic1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libext2fs2 libfdisk1 libgcc-9-dev libgcc-s1 libgmp10 libgnutls30 libgomp1 libgpg-error0 libidn2-0 libitm1 libjson-c4 libkmod2 liblsan0 libmount1 libncurses6 libncursesw6 libnpth0 libperl5.30 libprocps8 libseccomp2 libsmartcols1 libsqlite3-0 libss2 libstdc++-9-dev libstdc++6 libsystemd0 libtinfo6 libtsan0 libubsan1 libudev1 libunistring2 libuuid1 libzstd1 linux-libc-dev login logsave make mount ncurses-base ncurses-bin passwd perl perl-base perl-modules-5.30 pkgbinarymangler procps systemd systemd-sysv systemd-timesyncd sysvinit-utils tzdata util-linux 103 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 57.8 MB of archives. After this operation, 719 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libcrypt-dev arm64 1:4.4.16-1ubuntu1 [111 kB] Get:2 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libcrypt1 arm64 1:4.4.16-1ubuntu1 [82.5 kB] Get:3 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libc6-dev arm64 2.31-0ubuntu10 [2059 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libc-dev-bin arm64 2.31-0ubuntu10 [64.1 kB] Get:5 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 linux-libc-dev arm64 5.4.0-37.41 [1083 kB] Get:6 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libatomic1 arm64 10.1.0-4ubuntu1 [9900 B] Get:7 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libubsan1 arm64 10.1.0-4ubuntu1 [127 kB] Get:8 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libtsan0 arm64 10.1.0-4ubuntu1 [302 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 liblsan0 arm64 10.1.0-4ubuntu1 [130 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libitm1 arm64 10.1.0-4ubuntu1 [24.2 kB] Get:11 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libgomp1 arm64 10.1.0-4ubuntu1 [93.3 kB] Get:12 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 gcc-10-base arm64 10.1.0-4ubuntu1 [20.1 kB] Get:13 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libgcc-s1 arm64 10.1.0-4ubuntu1 [34.7 kB] Get:14 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libcc1-0 arm64 10.1.0-4ubuntu1 [37.1 kB] Get:15 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libstdc++6 arm64 10.1.0-4ubuntu1 [463 kB] Get:16 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libc6 arm64 2.31-0ubuntu10 [2266 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main arm64 base-files arm64 11ubuntu7 [60.0 kB] Get:18 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 bsdutils arm64 1:2.35.1-5ubuntu2 [82.5 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main arm64 debianutils arm64 4.11 [85.3 kB] Get:20 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 dpkg arm64 1.19.7ubuntu4 [1113 kB] Get:21 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 perl-modules-5.30 all 5.30.3-4 [2740 kB] Get:22 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libperl5.30 arm64 5.30.3-4 [3748 kB] Get:23 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 perl arm64 5.30.3-4 [223 kB] Get:24 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 perl-base arm64 5.30.3-4 [1391 kB] Get:25 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 bzip2 arm64 1.0.8-3 [32.4 kB] Get:26 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libbz2-1.0 arm64 1.0.8-3 [33.0 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main arm64 debconf all 1.5.74 [121 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main arm64 dash arm64 0.5.10.2-7 [84.2 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main arm64 gzip arm64 1.10-2ubuntu1 [92.8 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main arm64 login arm64 1:4.8.1-1ubuntu6 [218 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main arm64 ncurses-bin arm64 6.2-1 [167 kB] Get:32 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libblkid1 arm64 2.35.1-5ubuntu2 [125 kB] Get:33 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libuuid1 arm64 2.35.1-5ubuntu2 [21.6 kB] Get:34 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libfdisk1 arm64 2.35.1-5ubuntu2 [156 kB] Get:35 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libmount1 arm64 2.35.1-5ubuntu2 [137 kB] Get:36 http://ftpmaster.internal/ubuntu groovy/main arm64 libncurses6 arm64 6.2-1 [91.8 kB] Get:37 http://ftpmaster.internal/ubuntu groovy/main arm64 libncursesw6 arm64 6.2-1 [120 kB] Get:38 http://ftpmaster.internal/ubuntu groovy/main arm64 libtinfo6 arm64 6.2-1 [81.2 kB] Get:39 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libsmartcols1 arm64 2.35.1-5ubuntu2 [89.9 kB] Get:40 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 fdisk arm64 2.35.1-5ubuntu2 [117 kB] Get:41 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 util-linux arm64 2.35.1-5ubuntu2 [1009 kB] Get:42 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libc-bin arm64 2.31-0ubuntu10 [504 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main arm64 ncurses-base all 6.2-1 [18.7 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main arm64 sysvinit-utils arm64 2.96-3ubuntu1 [20.4 kB] Get:45 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 systemd-sysv arm64 245.6-1ubuntu1 [10.3 kB] Get:46 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 systemd-timesyncd arm64 245.6-1ubuntu1 [26.3 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/main arm64 libacl1 arm64 2.2.53-8 [17.9 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main arm64 libapparmor1 arm64 2.13.3-7ubuntu6 [33.1 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/main arm64 libcap2 arm64 1:2.34-2 [16.7 kB] Get:50 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libargon2-1 arm64 0~20171227-0.2build20.10.0 [18.5 kB] Get:51 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libudev1 arm64 245.6-1ubuntu1 [68.6 kB] Get:52 http://ftpmaster.internal/ubuntu groovy/main arm64 libdevmapper1.02.1 arm64 2:1.02.167-1ubuntu3 [110 kB] Get:53 http://ftpmaster.internal/ubuntu groovy/main arm64 libjson-c4 arm64 0.13.1+dfsg-7ubuntu1 [28.3 kB] Get:54 http://ftpmaster.internal/ubuntu groovy/main arm64 libcryptsetup12 arm64 2:2.3.1-1ubuntu1 [176 kB] Get:55 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libgmp10 arm64 2:6.2.0+dfsg-6 [217 kB] Get:56 http://ftpmaster.internal/ubuntu groovy/main arm64 libunistring2 arm64 0.9.10-4 [359 kB] Get:57 http://ftpmaster.internal/ubuntu groovy/main arm64 libidn2-0 arm64 2.3.0-1 [51.9 kB] Get:58 http://ftpmaster.internal/ubuntu groovy/main arm64 libgnutls30 arm64 3.6.13-4ubuntu2 [754 kB] Get:59 http://ftpmaster.internal/ubuntu groovy/main arm64 libgpg-error0 arm64 1.38-1 [59.8 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/main arm64 libkmod2 arm64 27+20200310-2ubuntu1 [40.7 kB] Get:61 http://ftpmaster.internal/ubuntu groovy/main arm64 libseccomp2 arm64 2.4.3-1ubuntu3 [39.8 kB] Get:62 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 mount arm64 2.35.1-5ubuntu2 [115 kB] Get:63 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 systemd arm64 245.6-1ubuntu1 [3492 kB] Get:64 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libsystemd0 arm64 245.6-1ubuntu1 [246 kB] Get:65 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libzstd1 arm64 1.4.5+dfsg-2 [277 kB] Get:66 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libapt-pkg6.0 arm64 2.1.6 [767 kB] Get:67 http://ftpmaster.internal/ubuntu groovy/main arm64 gpgv arm64 2.2.20-1ubuntu1 [184 kB] Get:68 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 apt arm64 2.1.6 [1238 kB] Get:69 http://ftpmaster.internal/ubuntu groovy/main arm64 logsave arm64 1.45.6-1ubuntu1 [10.2 kB] Get:70 http://ftpmaster.internal/ubuntu groovy/main arm64 libext2fs2 arm64 1.45.6-1ubuntu1 [177 kB] Get:71 http://ftpmaster.internal/ubuntu groovy/main arm64 e2fsprogs arm64 1.45.6-1ubuntu1 [504 kB] Get:72 http://ftpmaster.internal/ubuntu groovy/main arm64 libcap-ng0 arm64 0.7.9-2.2 [10.6 kB] Get:73 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libdebconfclient0 arm64 0.252ubuntu1 [6196 B] Get:74 http://ftpmaster.internal/ubuntu groovy/main arm64 passwd arm64 1:4.8.1-1ubuntu6 [770 kB] Get:75 http://ftpmaster.internal/ubuntu groovy/main arm64 libcom-err2 arm64 1.45.6-1ubuntu1 [9336 B] Get:76 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libprocps8 arm64 2:3.3.16-5ubuntu1 [31.5 kB] Get:77 http://ftpmaster.internal/ubuntu groovy/main arm64 libss2 arm64 1.45.6-1ubuntu1 [10.7 kB] Get:78 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 procps arm64 2:3.3.16-5ubuntu1 [229 kB] Get:79 http://ftpmaster.internal/ubuntu groovy/main arm64 ca-certificates all 20190110ubuntu2 [145 kB] Get:80 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libsqlite3-0 arm64 3.32.2-2 [508 kB] Get:81 http://ftpmaster.internal/ubuntu groovy/main arm64 tzdata all 2020a-0ubuntu1 [293 kB] Get:82 http://ftpmaster.internal/ubuntu groovy/main arm64 libctf0 arm64 2.34-7ubuntu1 [43.0 kB] Get:83 http://ftpmaster.internal/ubuntu groovy/main arm64 binutils-aarch64-linux-gnu arm64 2.34-7ubuntu1 [1988 kB] Get:84 http://ftpmaster.internal/ubuntu groovy/main arm64 libbinutils arm64 2.34-7ubuntu1 [473 kB] Get:85 http://ftpmaster.internal/ubuntu groovy/main arm64 binutils arm64 2.34-7ubuntu1 [3348 B] Get:86 http://ftpmaster.internal/ubuntu groovy/main arm64 binutils-common arm64 2.34-7ubuntu1 [207 kB] Get:87 http://ftpmaster.internal/ubuntu groovy/main arm64 libctf-nobfd0 arm64 2.34-7ubuntu1 [43.8 kB] Get:88 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libasan5 arm64 9.3.0-14ubuntu1 [365 kB] Get:89 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 g++-9 arm64 9.3.0-14ubuntu1 [6819 kB] Get:90 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 gcc-9 arm64 9.3.0-14ubuntu1 [6695 kB] Get:91 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libstdc++-9-dev arm64 9.3.0-14ubuntu1 [1679 kB] Get:92 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libgcc-9-dev arm64 9.3.0-14ubuntu1 [918 kB] Get:93 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 cpp-9 arm64 9.3.0-14ubuntu1 [5967 kB] Get:94 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 gcc-9-base arm64 9.3.0-14ubuntu1 [19.5 kB] Get:95 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 dpkg-dev all 1.19.7ubuntu4 [679 kB] Get:96 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 libdpkg-perl all 1.19.7ubuntu4 [230 kB] Get:97 http://ftpmaster.internal/ubuntu groovy-proposed/main arm64 make arm64 4.3-3 [160 kB] Get:98 http://ftpmaster.internal/ubuntu groovy/main arm64 libassuan0 arm64 2.5.3-7.1 [33.1 kB] Get:99 http://ftpmaster.internal/ubuntu groovy/main arm64 libnpth0 arm64 1.6-2 [7644 B] Get:100 http://ftpmaster.internal/ubuntu groovy/main arm64 gpg arm64 2.2.20-1ubuntu1 [443 kB] Get:101 http://ftpmaster.internal/ubuntu groovy/main arm64 gpgconf arm64 2.2.20-1ubuntu1 [117 kB] Get:102 http://ftpmaster.internal/ubuntu groovy/main arm64 gpg-agent arm64 2.2.20-1ubuntu1 [216 kB] Get:103 http://ftpmaster.internal/ubuntu groovy/main arm64 pkgbinarymangler all 146 [31.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 57.8 MB in 2s (27.0 MB/s) (Reading database ... 12809 files and directories currently installed.) 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Unpacking base-files (11ubuntu7) over (11ubuntu5) ... Setting up base-files (11ubuntu7) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Installing new version of config file /etc/update-motd.d/50-motd-news ... (Reading database ... 12808 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.35.1-5ubuntu2_arm64.deb ... Unpacking bsdutils (1:2.35.1-5ubuntu2) over (1:2.34-0.1ubuntu9) ... Setting up bsdutils (1:2.35.1-5ubuntu2) ... (Reading database ... 12811 files and directories currently installed.) Preparing to unpack .../debianutils_4.11_arm64.deb ... Unpacking debianutils (4.11) over (4.9.1) ... Setting up debianutils (4.11) ... (Reading database ... 12811 files and directories currently installed.) Preparing to unpack .../dpkg_1.19.7ubuntu4_arm64.deb ... Unpacking dpkg (1.19.7ubuntu4) over (1.19.7ubuntu3) ... 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Setting up libstdc++-9-dev:arm64 (9.3.0-14ubuntu1) ... Setting up g++-9 (9.3.0-14ubuntu1) ... Setting up systemd-timesyncd (245.6-1ubuntu1) ... Installing new version of config file /etc/dhcp/dhclient-exit-hooks.d/timesyncd ... Setting up systemd (245.6-1ubuntu1) ... Installing new version of config file /etc/systemd/journald.conf ... Initializing machine ID from KVM UUID. Setting up systemd-sysv (245.6-1ubuntu1) ... Processing triggers for libc-bin (2.31-0ubuntu10) ... Processing triggers for ca-certificates (20190110ubuntu2) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-19467013 arm64 groovy-proposed -c chroot:build-PACKAGEBUILD-19467013 --arch=arm64 --dist=groovy-proposed --nolog ivar_1.2.2+dfsg-3.dsc Initiating build PACKAGEBUILD-19467013 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-177-generic #207-Ubuntu SMP Mon Mar 16 01:17:51 UTC 2020 aarch64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-003.buildd +==============================================================================+ | ivar 1.2.2+dfsg-3 (arm64) 17 Jun 2020 00:00 | +==============================================================================+ Package: ivar Version: 1.2.2+dfsg-3 Source Version: 1.2.2+dfsg-3 Distribution: groovy-proposed Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 I: NOTICE: Log filtering will replace 'build/ivar-fhRNzG/ivar-1.2.2+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/ivar-fhRNzG' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-19467013/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- ivar_1.2.2+dfsg-3.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-NrxGpC/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-NrxGpC/apt_archive ./ InRelease Get:2 copy:/<>/resolver-NrxGpC/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-NrxGpC/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-NrxGpC/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-NrxGpC/apt_archive ./ Packages [525 B] Fetched 2858 B in 0s (86.6 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-NrxGpC/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (63.6 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12811 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper-compat (= 13), libhts-dev Filtered Build-Depends: debhelper-compat (= 13), libhts-dev dpkg-deb: building package 'sbuild-build-depends-ivar-dummy' in '/<>/resolver-UGUoY4/apt_archive/sbuild-build-depends-ivar-dummy.deb'. Ign:1 copy:/<>/resolver-UGUoY4/apt_archive ./ InRelease Get:2 copy:/<>/resolver-UGUoY4/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-UGUoY4/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-UGUoY4/apt_archive ./ Sources [218 B] Get:5 copy:/<>/resolver-UGUoY4/apt_archive ./ Packages [535 B] Fetched 2872 B in 0s (74.8 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install ivar build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasn1-8-heimdal libbrotli1 libbsd0 libcroco3 libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts-dev libhts3 libhx509-5-heimdal libicu66 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libwind0-heimdal libxml2 m4 man-db po-debconf zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff krb5-doc krb5-user liblzma-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasn1-8-heimdal libbrotli1 libbsd0 libcroco3 libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhts-dev libhts3 libhx509-5-heimdal libicu66 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsub-override-perl libtool libuchardet0 libwind0-heimdal libxml2 m4 man-db po-debconf sbuild-build-depends-ivar-dummy zlib1g-dev 0 upgraded, 63 newly installed, 0 to remove and 0 not upgraded. Need to get 19.9 MB of archives. After this operation, 77.4 MB of additional disk space will be used. Get:1 copy:/<>/resolver-UGUoY4/apt_archive ./ sbuild-build-depends-ivar-dummy 0.invalid.0 [864 B] Get:2 http://ftpmaster.internal/ubuntu groovy/main arm64 libbsd0 arm64 0.10.0-1 [43.7 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main arm64 bsdmainutils arm64 11.1.2ubuntu3 [179 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main arm64 libuchardet0 arm64 0.0.7-1 [68.0 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main arm64 groff-base arm64 1.22.4-5 [797 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main arm64 libpipeline1 arm64 1.5.2-2build1 [26.1 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main arm64 man-db arm64 2.9.2-1 [1101 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/main arm64 libmagic-mgc arm64 1:5.38-5 [218 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main arm64 libmagic1 arm64 1:5.38-5 [71.6 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main arm64 file arm64 1:5.38-5 [23.3 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main arm64 libelf1 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arm64 0.21.0-1.1 [51.4 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main arm64 libsigsegv2 arm64 2.12-2 [13.3 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main arm64 m4 arm64 1.4.18-4 [194 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main arm64 autoconf all 2.69-11.1 [321 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main arm64 autotools-dev all 20180224.1 [39.6 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main arm64 automake all 1:1.16.2-1ubuntu1 [521 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main arm64 autopoint all 0.19.8.1-10build1 [412 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main arm64 libtool all 2.4.6-14 [161 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main arm64 dh-autoreconf all 19 [16.1 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main arm64 libdebhelper-perl all 13.1ubuntu1 [64.0 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main arm64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:32 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http://ftpmaster.internal/ubuntu groovy/main arm64 libasn1-8-heimdal arm64 7.7.0+dfsg-2 [150 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main arm64 libbrotli1 arm64 1.0.7-6.1 [260 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main arm64 libheimbase1-heimdal arm64 7.7.0+dfsg-2 [27.9 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main arm64 libhcrypto4-heimdal arm64 7.7.0+dfsg-2 [84.8 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main arm64 libwind0-heimdal arm64 7.7.0+dfsg-2 [47.2 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/main arm64 libhx509-5-heimdal arm64 7.7.0+dfsg-2 [98.6 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main arm64 libkrb5-26-heimdal arm64 7.7.0+dfsg-2 [192 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/main arm64 libheimntlm0-heimdal arm64 7.7.0+dfsg-2 [14.8 kB] Get:50 http://ftpmaster.internal/ubuntu groovy/main arm64 libgssapi3-heimdal arm64 7.7.0+dfsg-2 [88.4 kB] Get:51 http://ftpmaster.internal/ubuntu groovy/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-2 [15.1 kB] Get:52 http://ftpmaster.internal/ubuntu groovy/main arm64 libsasl2-2 arm64 2.1.27+dfsg-2 [48.4 kB] Get:53 http://ftpmaster.internal/ubuntu groovy/main arm64 libldap-common all 2.4.50+dfsg-1ubuntu1 [17.4 kB] Get:54 http://ftpmaster.internal/ubuntu groovy/main arm64 libldap-2.4-2 arm64 2.4.50+dfsg-1ubuntu1 [146 kB] Get:55 http://ftpmaster.internal/ubuntu groovy/main arm64 libnghttp2-14 arm64 1.41.0-2 [62.6 kB] Get:56 http://ftpmaster.internal/ubuntu groovy/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2build1 [53.3 kB] Get:57 http://ftpmaster.internal/ubuntu groovy/main arm64 libssh-4 arm64 0.9.4-1ubuntu1 [159 kB] Get:58 http://ftpmaster.internal/ubuntu groovy/main arm64 libcurl3-gnutls arm64 7.68.0-1ubuntu2 [211 kB] Get:59 http://ftpmaster.internal/ubuntu groovy/universe arm64 libdeflate0 arm64 1.6-1 [51.1 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/universe arm64 libhts3 arm64 1.10.2-3 [316 kB] Get:61 http://ftpmaster.internal/ubuntu groovy/main arm64 liblzma-dev arm64 5.2.4-1 [144 kB] Get:62 http://ftpmaster.internal/ubuntu groovy/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2ubuntu1 [154 kB] Get:63 http://ftpmaster.internal/ubuntu groovy/universe arm64 libhts-dev arm64 1.10.2-3 [92.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 19.9 MB in 1s (14.4 MB/s) Selecting previously unselected package libbsd0:arm64. (Reading database ... 12811 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_arm64.deb ... Unpacking libbsd0:arm64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2ubuntu3_arm64.deb ... Unpacking bsdmainutils (11.1.2ubuntu3) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../02-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-5_arm64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../04-libpipeline1_1.5.2-2build1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.2-2build1) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.2-1_arm64.deb ... Unpacking man-db (2.9.2-1) ... 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Unpacking libcurl3-gnutls:arm64 (7.68.0-1ubuntu2) ... Selecting previously unselected package libdeflate0:arm64. Preparing to unpack .../57-libdeflate0_1.6-1_arm64.deb ... Unpacking libdeflate0:arm64 (1.6-1) ... Selecting previously unselected package libhts3:arm64. Preparing to unpack .../58-libhts3_1.10.2-3_arm64.deb ... Unpacking libhts3:arm64 (1.10.2-3) ... Selecting previously unselected package liblzma-dev:arm64. Preparing to unpack .../59-liblzma-dev_5.2.4-1_arm64.deb ... Unpacking liblzma-dev:arm64 (5.2.4-1) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../60-zlib1g-dev_1%3a1.2.11.dfsg-2ubuntu1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.2.11.dfsg-2ubuntu1) ... Selecting previously unselected package libhts-dev:arm64. Preparing to unpack .../61-libhts-dev_1.10.2-3_arm64.deb ... Unpacking libhts-dev:arm64 (1.10.2-3) ... Selecting previously unselected package sbuild-build-depends-ivar-dummy. Preparing to unpack .../62-sbuild-build-depends-ivar-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-ivar-dummy (0.invalid.0) ... Setting up libpipeline1:arm64 (1.5.2-2build1) ... Setting up libkeyutils1:arm64 (1.6.1-2ubuntu1) ... Setting up libpsl5:arm64 (0.21.0-1.1) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:arm64 (2.64.3-1) ... No schema files found: doing nothing. Setting up libicu66:arm64 (66.1-2ubuntu2) ... Setting up libdebhelper-perl (13.1ubuntu1) ... Setting up libbrotli1:arm64 (1.0.7-6.1) ... Setting up libnghttp2-14:arm64 (1.41.0-2) ... Setting up libmagic1:arm64 (1:5.38-5) ... Setting up libdeflate0:arm64 (1.6-1) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up file (1:5.38-5) ... Setting up libldap-common (2.4.50+dfsg-1ubuntu1) ... Setting up libkrb5support0:arm64 (1.17-6ubuntu4) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-2) ... Setting up autotools-dev (20180224.1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2build1) ... Setting up libsigsegv2:arm64 (2.12-2) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up libk5crypto3:arm64 (1.17-6ubuntu4) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-2) ... Setting up libroken18-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up liblzma-dev:arm64 (5.2.4-1) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-2ubuntu1) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libkrb5-3:arm64 (1.17-6ubuntu4) ... Setting up libbsd0:arm64 (0.10.0-1) ... Setting up libelf1:arm64 (0.176-1.1build1) ... Setting up libxml2:arm64 (2.9.10+dfsg-5) ... Setting up libheimbase1-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up libfile-stripnondeterminism-perl (1.8.1-1) ... Setting up libtool (2.4.6-14) ... Setting up libasn1-8-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up m4 (1.4.18-4) ... Setting up libhcrypto4-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up libwind0-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up bsdmainutils (11.1.2ubuntu3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:arm64 (1.17-6ubuntu4) ... Setting up libcroco3:arm64 (0.6.13-1) ... Setting up libssh-4:arm64 (0.9.4-1ubuntu1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.8.1-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up automake (1:1.16.2-1ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10build1) ... Setting up libhx509-5-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up man-db (2.9.2-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libkrb5-26-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up po-debconf (1.0.21) ... Setting up libheimntlm0-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up libgssapi3-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up libldap-2.4-2:arm64 (2.4.50+dfsg-1ubuntu1) ... Setting up libcurl3-gnutls:arm64 (7.68.0-1ubuntu2) ... Setting up libhts3:arm64 (1.10.2-3) ... Setting up libhts-dev:arm64 (1.10.2-3) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13.1ubuntu1) ... Setting up sbuild-build-depends-ivar-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.31-0ubuntu10) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-177-generic arm64 (aarch64) Toolchain package versions: binutils_2.34-7ubuntu1 dpkg-dev_1.19.7ubuntu4 g++-9_9.3.0-14ubuntu1 gcc-9_9.3.0-14ubuntu1 libc6-dev_2.31-0ubuntu10 libstdc++-9-dev_9.3.0-14ubuntu1 libstdc++6_10.1.0-4ubuntu1 linux-libc-dev_5.4.0-37.41 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.1.6 autoconf_2.69-11.1 automake_1:1.16.2-1ubuntu1 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu7 base-passwd_3.5.47 bash_5.0-6ubuntu1 binutils_2.34-7ubuntu1 binutils-aarch64-linux-gnu_2.34-7ubuntu1 binutils-common_2.34-7ubuntu1 bsdmainutils_11.1.2ubuntu3 bsdutils_1:2.35.1-5ubuntu2 build-essential_12.8ubuntu1 bzip2_1.0.8-3 ca-certificates_20190110ubuntu2 coreutils_8.30-3ubuntu2 cpp_4:9.3.0-1ubuntu2 cpp-9_9.3.0-14ubuntu1 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.1ubuntu1 debianutils_4.11 dh-autoreconf_19 dh-strip-nondeterminism_1.8.1-1 diffutils_1:3.7-3 dpkg_1.19.7ubuntu4 dpkg-dev_1.19.7ubuntu4 dwz_0.13-5 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.24-1 fdisk_2.35.1-5ubuntu2 file_1:5.38-5 findutils_4.7.0-1ubuntu1 g++_4:9.3.0-1ubuntu2 g++-9_9.3.0-14ubuntu1 gcc_4:9.3.0-1ubuntu2 gcc-10-base_10.1.0-4ubuntu1 gcc-9_9.3.0-14ubuntu1 gcc-9-base_9.3.0-14ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2ubuntu1 hostname_3.23 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapparmor1_2.13.3-7ubuntu6 libapt-pkg6.0_2.1.6 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2build20.10.0 libasan5_9.3.0-14ubuntu1 libasn1-8-heimdal_7.7.0+dfsg-2 libassuan0_2.5.3-7.1 libatomic1_10.1.0-4ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu6 libaudit1_1:2.8.5-2ubuntu6 libbinutils_2.34-7ubuntu1 libblkid1_2.35.1-5ubuntu2 libbrotli1_1.0.7-6.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-3 libc-bin_2.31-0ubuntu10 libc-dev-bin_2.31-0ubuntu10 libc6_2.31-0ubuntu10 libc6-dev_2.31-0ubuntu10 libcap-ng0_0.7.9-2.2 libcap2_1:2.34-2 libcc1-0_10.1.0-4ubuntu1 libcom-err2_1.45.6-1ubuntu1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1ubuntu1 libcrypt1_1:4.4.16-1ubuntu1 libcryptsetup12_2:2.3.1-1ubuntu1 libctf-nobfd0_2.34-7ubuntu1 libctf0_2.34-7ubuntu1 libcurl3-gnutls_7.68.0-1ubuntu2 libdb5.3_5.3.28+dfsg1-0.6ubuntu2 libdebconfclient0_0.252ubuntu1 libdebhelper-perl_13.1ubuntu1 libdeflate0_1.6-1 libdevmapper1.02.1_2:1.02.167-1ubuntu3 libdpkg-perl_1.19.7ubuntu4 libelf1_0.176-1.1build1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.24-1 libfdisk1_2.35.1-5ubuntu2 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.8.1-1 libgcc-9-dev_9.3.0-14ubuntu1 libgcc-s1_10.1.0-4ubuntu1 libgcrypt20_1.8.5-5ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.3-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.13-4ubuntu2 libgomp1_10.1.0-4ubuntu1 libgpg-error0_1.38-1 libgssapi-krb5-2_1.17-6ubuntu4 libgssapi3-heimdal_7.7.0+dfsg-2 libhcrypto4-heimdal_7.7.0+dfsg-2 libheimbase1-heimdal_7.7.0+dfsg-2 libheimntlm0-heimdal_7.7.0+dfsg-2 libhogweed5_3.5.1+really3.5.1-2 libhts-dev_1.10.2-3 libhts3_1.10.2-3 libhx509-5-heimdal_7.7.0+dfsg-2 libicu66_66.1-2ubuntu2 libidn2-0_2.3.0-1 libip4tc2_1.8.4-3ubuntu2 libisl22_0.22.1-1 libitm1_10.1.0-4ubuntu1 libjson-c4_0.13.1+dfsg-7ubuntu1 libk5crypto3_1.17-6ubuntu4 libkeyutils1_1.6.1-2ubuntu1 libkmod2_27+20200310-2ubuntu1 libkrb5-26-heimdal_7.7.0+dfsg-2 libkrb5-3_1.17-6ubuntu4 libkrb5support0_1.17-6ubuntu4 libldap-2.4-2_2.4.50+dfsg-1ubuntu1 libldap-common_2.4.50+dfsg-1ubuntu1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10.1.0-4ubuntu1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.1-5ubuntu2 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.41.0-2 libnpth0_1.6-2 libp11-kit0_0.23.20-1build1 libpam-modules_1.3.1-5ubuntu4 libpam-modules-bin_1.3.1-5ubuntu4 libpam-runtime_1.3.1-5ubuntu4 libpam0g_1.3.1-5ubuntu4 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12build1 libperl5.30_5.30.3-4 libpipeline1_1.5.2-2build1 libpng16-16_1.6.37-2 libprocps8_2:3.3.16-5ubuntu1 libpsl5_0.21.0-1.1 libreadline8_8.0-4 libroken18-heimdal_7.7.0+dfsg-2 librtmp1_2.4+20151223.gitfa8646d.1-2build1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1ubuntu3 libselinux1_3.0-1build2 libsemanage-common_3.0-1build2 libsemanage1_3.0-1build2 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.35.1-5ubuntu2 libsqlite3-0_3.32.2-2 libss2_1.45.6-1ubuntu1 libssh-4_0.9.4-1ubuntu1 libssl1.1_1.1.1f-1ubuntu2 libstdc++-9-dev_9.3.0-14ubuntu1 libstdc++6_10.1.0-4ubuntu1 libsub-override-perl_0.09-2 libsystemd0_245.6-1ubuntu1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10.1.0-4ubuntu1 libubsan1_10.1.0-4ubuntu1 libuchardet0_0.0.7-1 libudev1_245.6-1ubuntu1 libunistring2_0.9.10-4 libuuid1_2.35.1-5ubuntu2 libwind0-heimdal_7.7.0+dfsg-2 libxml2_2.9.10+dfsg-5 libzstd1_1.4.5+dfsg-2 linux-libc-dev_5.4.0-37.41 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu6 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.3-3 man-db_2.9.2-1 mawk_1.3.4.20200120-2 mount_2.35.1-5ubuntu2 ncurses-base_6.2-1 ncurses-bin_6.2-1 openssl_1.1.1f-1ubuntu2 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu6 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-3build1 pkgbinarymangler_146 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu1 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-ivar-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 systemd_245.6-1ubuntu1 systemd-sysv_245.6-1ubuntu1 systemd-timesyncd_245.6-1ubuntu1 sysvinit-utils_2.96-3ubuntu1 tar_1.30+dfsg-7 tzdata_2020a-0ubuntu1 ubuntu-keyring_2020.02.11.2 util-linux_2.35.1-5ubuntu2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2ubuntu1 zlib1g-dev_1:1.2.11.dfsg-2ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Jun 16 17:23:33 2020 UTC gpgv: using RSA key 84C1977A89E7EFED3E5CA62E2FD8BEDAC020EED1 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./ivar_1.2.2+dfsg-3.dsc dpkg-source: info: extracting ivar in ivar-1.2.2+dfsg dpkg-source: info: unpacking ivar_1.2.2+dfsg.orig.tar.xz dpkg-source: info: unpacking ivar_1.2.2+dfsg-3.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-19467013 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-19467013 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-19467013 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package ivar dpkg-buildpackage: info: source version 1.2.2+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/ivar-1.2.2+dfsg' rm -f data/db/test_ref.fa.fai data/test.gap.fa data/test.gap.qual.txt data/test.indel.tsv data/test.masked_primer_indices.txt data/test.trimmed.masked.bam data/test.trimmed.masked.bam.bai data/test.trimmed.sorted.bam.bai data/test.unmapped.sorted.bam.bai make[1]: Leaving directory '/<>/ivar-1.2.2+dfsg' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:12: installing './compile' configure.ac:6: installing './install-sh' configure.ac:6: installing './missing' src/Makefile.am: installing './depcomp' parallel-tests: installing './test-driver' dh_auto_configure -a ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gawk... (cached) mawk checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... none checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking how to run the C preprocessor... gcc -E checking for main in -lhts... no checking for main in -lpthread... no checking for main in -lz... no checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... no checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for unistd.h... (cached) yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for inline... inline checking for int16_t... yes checking for int32_t... yes checking for int8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint8_t... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... no checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... no checking for memmove... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating tests/Makefile config.status: creating config.h config.status: executing depfiles commands dh_auto_build -a make -j4 make[1]: Entering directory '/<>/ivar-1.2.2+dfsg' make all-recursive make[2]: Entering directory '/<>/ivar-1.2.2+dfsg' Making all in src make[3]: Entering directory '/<>/ivar-1.2.2+dfsg/src' g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o ivar.o ivar.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o call_consensus_pileup.o call_consensus_pileup.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o alignment.o alignment.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o suffix_tree.o suffix_tree.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o trim_primer_quality.o trim_primer_quality.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o remove_reads_from_amplicon.o remove_reads_from_amplicon.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o call_variants.o call_variants.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o primer_bed.o primer_bed.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o allele_functions.o allele_functions.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o get_masked_amplicons.o get_masked_amplicons.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o get_common_variants.o get_common_variants.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o parse_gff.o parse_gff.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o ref_seq.o ref_seq.cpp g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ivar ivar.o call_consensus_pileup.o alignment.o suffix_tree.o trim_primer_quality.o remove_reads_from_amplicon.o call_variants.o primer_bed.o allele_functions.o get_masked_amplicons.o get_common_variants.o parse_gff.o ref_seq.o -lhts -lz -lpthread -lhts -lz -lpthread make[3]: Leaving directory '/<>/ivar-1.2.2+dfsg/src' Making all in tests make[3]: Entering directory '/<>/ivar-1.2.2+dfsg/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/ivar-1.2.2+dfsg/tests' make[3]: Entering directory '/<>/ivar-1.2.2+dfsg' make[3]: Leaving directory '/<>/ivar-1.2.2+dfsg' make[2]: Leaving directory '/<>/ivar-1.2.2+dfsg' make[1]: Leaving directory '/<>/ivar-1.2.2+dfsg' dh_auto_test -a make -j4 check VERBOSE=1 make[1]: Entering directory '/<>/ivar-1.2.2+dfsg' Making check in src make[2]: Entering directory '/<>/ivar-1.2.2+dfsg/src' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/ivar-1.2.2+dfsg/src' Making check in tests make[2]: Entering directory '/<>/ivar-1.2.2+dfsg/tests' make check_primer_trim check_quality_trim check_consensus check_allele_depth check_consensus_threshold check_consensus_min_depth check_primer_bed check_getmasked check_removereads check_variants check_common_variants check_unpaired_trim check_primer_trim_edge_cases make[3]: Entering directory '/<>/ivar-1.2.2+dfsg/tests' g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o test_primer_trim.o test_primer_trim.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o check_quality_trim.o check_quality_trim.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o test_call_consensus_from_plup.o test_call_consensus_from_plup.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o test_allele_depth.o test_allele_depth.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o test_consensus_threshold.o test_consensus_threshold.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o test_consensus_min_depth.o test_consensus_min_depth.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o test_primer_bed.o test_primer_bed.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o test_getmasked.o test_getmasked.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o ../src/get_masked_amplicons.o ../src/get_masked_amplicons.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o test_removereads.o test_removereads.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o ../src/remove_reads_from_amplicon.o ../src/remove_reads_from_amplicon.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o test_variants.o test_variants.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o ../src/call_variants.o ../src/call_variants.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o ../src/parse_gff.o ../src/parse_gff.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o ../src/ref_seq.o ../src/ref_seq.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o test_common_variants.o test_common_variants.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o ../src/get_common_variants.o ../src/get_common_variants.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o test_unpaired_trim.o test_unpaired_trim.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o test_primer_trim_edge_cases.o test_primer_trim_edge_cases.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o ../src/trim_primer_quality.o ../src/trim_primer_quality.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o ../src/primer_bed.o ../src/primer_bed.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o ../src/call_consensus_pileup.o ../src/call_consensus_pileup.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -std=c++11 -Wall -Wextra -Werror -c -o ../src/allele_functions.o ../src/allele_functions.cpp g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_primer_bed test_primer_bed.o ../src/primer_bed.o -lhts -lz -lpthread g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_getmasked test_getmasked.o ../src/get_masked_amplicons.o ../src/primer_bed.o -lhts -lz -lpthread g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_removereads test_removereads.o ../src/remove_reads_from_amplicon.o ../src/primer_bed.o ../src/trim_primer_quality.o -lhts -lz -lpthread g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_common_variants test_common_variants.o ../src/get_common_variants.o -lhts -lz -lpthread g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_unpaired_trim test_unpaired_trim.o ../src/trim_primer_quality.o ../src/primer_bed.o -lhts -lz -lpthread g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_primer_trim_edge_cases test_primer_trim_edge_cases.o ../src/trim_primer_quality.o ../src/primer_bed.o -lhts -lz -lpthread g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_primer_trim test_primer_trim.o ../src/trim_primer_quality.o ../src/primer_bed.o -lhts -lz -lpthread g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_quality_trim check_quality_trim.o ../src/trim_primer_quality.o ../src/primer_bed.o -lhts -lz -lpthread g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_consensus test_call_consensus_from_plup.o ../src/call_consensus_pileup.o ../src/allele_functions.o -lhts -lz -lpthread g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_allele_depth test_allele_depth.o ../src/allele_functions.o -lhts -lz -lpthread g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_consensus_threshold test_consensus_threshold.o ../src/call_consensus_pileup.o ../src/allele_functions.o -lhts -lz -lpthread g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_consensus_min_depth test_consensus_min_depth.o ../src/call_consensus_pileup.o ../src/allele_functions.o -lhts -lz -lpthread g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o check_variants test_variants.o ../src/call_variants.o ../src/allele_functions.o ../src/parse_gff.o ../src/ref_seq.o -lhts -lz -lpthread make[3]: Leaving directory '/<>/ivar-1.2.2+dfsg/tests' make check-TESTS make[3]: Entering directory '/<>/ivar-1.2.2+dfsg/tests' make[4]: Entering directory '/<>/ivar-1.2.2+dfsg/tests' PASS: check_consensus PASS: check_quality_trim PASS: check_allele_depth PASS: check_primer_trim PASS: check_primer_bed PASS: check_consensus_min_depth PASS: check_consensus_threshold PASS: check_getmasked PASS: check_common_variants PASS: check_unpaired_trim PASS: check_variants PASS: check_removereads PASS: check_primer_trim_edge_cases ============================================================================ Testsuite summary for ivar 1.2.2 ============================================================================ # TOTAL: 13 # PASS: 13 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[4]: Leaving directory '/<>/ivar-1.2.2+dfsg/tests' make[3]: Leaving directory '/<>/ivar-1.2.2+dfsg/tests' make[2]: Leaving directory '/<>/ivar-1.2.2+dfsg/tests' make[2]: Entering directory '/<>/ivar-1.2.2+dfsg' make[2]: Leaving directory '/<>/ivar-1.2.2+dfsg' make[1]: Leaving directory '/<>/ivar-1.2.2+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_auto_install -a make -j4 install DESTDIR=/<>/ivar-1.2.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>/ivar-1.2.2+dfsg' Making install in src make[2]: Entering directory '/<>/ivar-1.2.2+dfsg/src' g++ -g -std=c++11 -Wall -Wextra -Werror -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ivar ivar.o call_consensus_pileup.o alignment.o suffix_tree.o trim_primer_quality.o remove_reads_from_amplicon.o call_variants.o primer_bed.o allele_functions.o get_masked_amplicons.o get_common_variants.o parse_gff.o ref_seq.o -lhts -lz -lpthread -lhts -lz -lpthread make[3]: Entering directory '/<>/ivar-1.2.2+dfsg/src' make[3]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/<>/ivar-1.2.2+dfsg/debian/tmp/usr/bin' /usr/bin/install -c ivar '/<>/ivar-1.2.2+dfsg/debian/tmp/usr/bin' make[3]: Leaving directory '/<>/ivar-1.2.2+dfsg/src' make[2]: Leaving directory '/<>/ivar-1.2.2+dfsg/src' Making install in tests make[2]: Entering directory '/<>/ivar-1.2.2+dfsg/tests' make[3]: Entering directory '/<>/ivar-1.2.2+dfsg/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/ivar-1.2.2+dfsg/tests' make[2]: Leaving directory '/<>/ivar-1.2.2+dfsg/tests' make[2]: Entering directory '/<>/ivar-1.2.2+dfsg' make[3]: Entering directory '/<>/ivar-1.2.2+dfsg' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/ivar-1.2.2+dfsg' make[2]: Leaving directory '/<>/ivar-1.2.2+dfsg' make[1]: Leaving directory '/<>/ivar-1.2.2+dfsg' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a -a dh_strip -a -a dh_makeshlibs -a -a dh_shlibdeps -a -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 pkgstriptranslations: processing ivar-dbgsym (in debian/.debhelper/ivar/dbgsym-root); do_strip: , oemstrip: pkgstriptranslations: processing ivar (in debian/ivar); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/ivar/dbgsym-root/DEBIAN/control, package ivar-dbgsym, directory debian/.debhelper/ivar/dbgsym-root dpkg-deb: building package 'ivar-dbgsym' in 'debian/.debhelper/scratch-space/build-ivar/ivar-dbgsym_1.2.2+dfsg-3_arm64.deb'. Renaming ivar-dbgsym_1.2.2+dfsg-3_arm64.deb to ivar-dbgsym_1.2.2+dfsg-3_arm64.ddeb pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/ivar/DEBIAN/control, package ivar, directory debian/ivar pkgstripfiles: Running PNG optimization (using 4 cpus) for package ivar ... pkgstripfiles: No PNG files. dpkg-deb: building package 'ivar' in '../ivar_1.2.2+dfsg-3_arm64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../ivar_1.2.2+dfsg-3_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20200617-0002 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ ivar_1.2.2+dfsg-3_arm64.changes: -------------------------------- Format: 1.8 Date: Tue, 16 Jun 2020 21:55:42 +0530 Source: ivar Binary: ivar Architecture: arm64 Version: 1.2.2+dfsg-3 Distribution: groovy-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Pranav Ballaney Description: ivar - functions broadly useful for viral amplicon-based sequencing Changes: ivar (1.2.2+dfsg-3) unstable; urgency=medium . * Team upload. * Add reference data for autopkgtests * Add recommended package as per docs * Add autopkgtests * Install docs and examples Checksums-Sha1: a2fb8332f1eebc4ef65ee9d07576cea919e9ffca 575440 ivar-dbgsym_1.2.2+dfsg-3_arm64.ddeb b5398024bf6a06d3164665f7ab699d46480974ff 6331 ivar_1.2.2+dfsg-3_arm64.buildinfo 0a1dbf9abfa1a41e817fcffdd5ccff4b48051c96 192104 ivar_1.2.2+dfsg-3_arm64.deb Checksums-Sha256: 5726d56f13e94fd410d5759e5fc1e2adb151708a5d6f5467f7caa28e9ec630c3 575440 ivar-dbgsym_1.2.2+dfsg-3_arm64.ddeb 570c268ee0bf0982d5b234015a6e9998c50bfd16ed54d7832445c7982819dacd 6331 ivar_1.2.2+dfsg-3_arm64.buildinfo 8aa67c413a50cc5948709a600cb1918cc9b33be96ddbf3cd4ea1161cd220fe95 192104 ivar_1.2.2+dfsg-3_arm64.deb Files: 50a311efd6e5aae89c009d786928876e 575440 debug optional ivar-dbgsym_1.2.2+dfsg-3_arm64.ddeb 387c3beeac8d11b508402a5a57f6a78d 6331 science optional ivar_1.2.2+dfsg-3_arm64.buildinfo 0457ff8c5fb8acd23d190c5d9018f094 192104 science optional ivar_1.2.2+dfsg-3_arm64.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ ivar_1.2.2+dfsg-3_arm64.deb --------------------------- new debian package, version 2.0. size 192104 bytes: control archive=2176 bytes. 1245 bytes, 25 lines control 3858 bytes, 47 lines md5sums Package: ivar Version: 1.2.2+dfsg-3 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1608 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libhts3 (>= 1.10), libstdc++6 (>= 9) Recommends: samtools Section: science Priority: optional Homepage: https://github.com/andersen-lab/ivar Description: functions broadly useful for viral amplicon-based sequencing iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing. Additional tools for metagenomic sequencing are actively being incorporated into iVar. While each of these functions can be accomplished using existing tools, iVar contains an intersection of functionality from multiple tools that are required to call iSNVs and consensus sequences from viral sequencing data across multiple replicates. iVar provided the following functions: . 1. trimming of primers and low-quality bases, 2. consensus calling, 3. variant calling - both iSNVs and insertions/deletions, and 4. identifying mismatches to primer sequences and excluding the corresponding reads from alignment files. drwxr-xr-x root/root 0 2020-06-16 16:25 ./ drwxr-xr-x root/root 0 2020-06-16 16:25 ./usr/ drwxr-xr-x root/root 0 2020-06-16 16:25 ./usr/bin/ -rwxr-xr-x root/root 502936 2020-06-16 16:25 ./usr/bin/ivar drwxr-xr-x root/root 0 2020-06-16 16:25 ./usr/share/ drwxr-xr-x root/root 0 2020-06-16 16:25 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-06-16 16:25 ./usr/share/doc/ivar/ -rw-r--r-- root/root 1592 2020-04-23 22:05 ./usr/share/doc/ivar/COOKBOOK.md -rw-r--r-- root/root 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+------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build-Space: 30964 Build-Time: 78 Distribution: groovy-proposed Host Architecture: arm64 Install-Time: 23 Job: ivar_1.2.2+dfsg-3.dsc Machine Architecture: arm64 Package: ivar Package-Time: 104 Source-Version: 1.2.2+dfsg-3 Space: 30964 Status: successful Version: 1.2.2+dfsg-3 -------------------------------------------------------------------------------- Finished at 20200617-0002 Build needed 00:01:44, 30964k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=groovy --arch=arm64 PACKAGEBUILD-19467013 Scanning for processes to kill in build PACKAGEBUILD-19467013