RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: 3.2.0-30-generic #48-Ubuntu SMP Fri Aug 24 16:52:48 UTC 2012 x86_64 Buildd toolchain package versions: launchpad-buildd_114-0~53~0.IS.08.04 python-lpbuildd_114-0~53~0.IS.08.04 bzr_2.5.1-0ubuntu2. Syncing the system clock with the buildd NTP service... 29 Oct 04:18:17 ntpdate[15685]: adjust time server 10.211.37.1 offset 0.000046 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'c38deec18984b60b961d322821b98a8cd6a26e47', '/home/buildd/filecache-default/0488630cf3a7380272d9120e88736e5876836cbd'] Unpacking chroot for build c38deec18984b60b961d322821b98a8cd6a26e47 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'c38deec18984b60b961d322821b98a8cd6a26e47'] Mounting chroot for build c38deec18984b60b961d322821b98a8cd6a26e47 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'c38deec18984b60b961d322821b98a8cd6a26e47', 'deb http://ftpmaster.internal/ubuntu raring main universe', 'deb http://ftpmaster.internal/ubuntu raring-security main universe', 'deb http://ftpmaster.internal/ubuntu raring-updates main universe', 'deb http://ftpmaster.internal/ubuntu raring-proposed main universe'] Overriding sources.list in build-c38deec18984b60b961d322821b98a8cd6a26e47 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'c38deec18984b60b961d322821b98a8cd6a26e47', 'amd64'] Updating debian chroot for build c38deec18984b60b961d322821b98a8cd6a26e47 Ign http://ftpmaster.internal raring InRelease Ign http://ftpmaster.internal raring-security InRelease Ign http://archive-team.internal raring InRelease Ign http://ftpmaster.internal raring-updates InRelease Ign http://archive-team.internal raring Release.gpg Ign http://ftpmaster.internal raring-proposed InRelease Get:1 http://ftpmaster.internal raring Release.gpg [933 B] Get:2 http://ftpmaster.internal raring-security Release.gpg [933 B] Get:3 http://archive-team.internal raring Release [730 B] Get:4 http://ftpmaster.internal raring-updates Release.gpg [933 B] Get:5 http://ftpmaster.internal raring-proposed Release.gpg [933 B] Get:6 http://ftpmaster.internal raring Release [49.6 kB] Get:7 http://archive-team.internal raring/main amd64 Packages Get:8 http://ftpmaster.internal raring-security Release [49.6 kB] Ign http://archive-team.internal raring/main Translation-en Get:9 http://ftpmaster.internal raring-updates Release [49.6 kB] Get:10 http://ftpmaster.internal raring-proposed Release [49.6 kB] Get:11 http://ftpmaster.internal raring/main amd64 Packages [1139 kB] Get:12 http://ftpmaster.internal raring/universe amd64 Packages [5274 kB] Get:13 http://ftpmaster.internal raring/main Translation-en [662 kB] Get:14 http://ftpmaster.internal raring/universe Translation-en [3647 kB] Get:15 http://ftpmaster.internal raring-security/main amd64 Packages [14 B] Get:16 http://ftpmaster.internal raring-security/universe amd64 Packages [14 B] Get:17 http://ftpmaster.internal raring-security/main Translation-en [14 B] Get:18 http://ftpmaster.internal raring-security/universe Translation-en [14 B] Get:19 http://ftpmaster.internal raring-updates/main amd64 Packages [14 B] Get:20 http://ftpmaster.internal raring-updates/universe amd64 Packages [14 B] Get:21 http://ftpmaster.internal raring-updates/main Translation-en [14 B] Get:22 http://ftpmaster.internal raring-updates/universe Translation-en [14 B] Get:23 http://ftpmaster.internal raring-proposed/main amd64 Packages [26.1 kB] Get:24 http://ftpmaster.internal raring-proposed/universe amd64 Packages [82.6 kB] Get:25 http://ftpmaster.internal raring-proposed/main Translation-en [13.5 kB] Get:26 http://ftpmaster.internal raring-proposed/universe Translation-en [57.0 kB] Fetched 11.1 MB in 3s (3036 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: kmod libcap2 libgcc-4.7-dev libkmod2 The following packages will be upgraded: adduser base-files busybox-initramfs cpp-4.7 dpkg dpkg-dev g++-4.7 gcc-4.7 gcc-4.7-base libc-bin libc-dev-bin libc6 libc6-dev libdpkg-perl libgcc1 libglib2.0-0 libgomp1 libitm1 libnih-dbus1 libnih1 libpcre3 libquadmath0 libsasl2-2 libsqlite3-0 libstdc++6 libstdc++6-4.7-dev libusb-0.1-4 lsb-base makedev module-init-tools multiarch-support perl perl-base perl-modules 34 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 45.6 MB of archives. After this operation, 956 kB disk space will be freed. WARNING: The following packages cannot be authenticated! base-files dpkg perl perl-base perl-modules libcap2 libnih-dbus1 libnih1 libc6-dev libc-dev-bin libc6 libc-bin libitm1 libgomp1 gcc-4.7-base libgcc1 cpp-4.7 libquadmath0 libgcc-4.7-dev libstdc++6-4.7-dev g++-4.7 gcc-4.7 libstdc++6 libusb-0.1-4 libkmod2 libsqlite3-0 libpcre3 libglib2.0-0 lsb-base module-init-tools kmod libsasl2-2 multiarch-support adduser busybox-initramfs makedev dpkg-dev libdpkg-perl Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ raring/main base-files amd64 6.11ubuntu3 [71.1 kB] Get:2 http://ftpmaster.internal/ubuntu/ raring/main dpkg amd64 1.16.9ubuntu1 [1995 kB] Get:3 http://ftpmaster.internal/ubuntu/ raring-proposed/main perl amd64 5.14.2-14 [4424 kB] Get:4 http://ftpmaster.internal/ubuntu/ raring-proposed/main perl-base amd64 5.14.2-14 [1502 kB] Get:5 http://ftpmaster.internal/ubuntu/ raring-proposed/main perl-modules all 5.14.2-14 [3392 kB] Get:6 http://ftpmaster.internal/ubuntu/ raring/main libcap2 amd64 1:2.22-1ubuntu4 [12.0 kB] Get:7 http://ftpmaster.internal/ubuntu/ raring/main libnih-dbus1 amd64 1.0.3-4ubuntu12 [15.8 kB] Get:8 http://ftpmaster.internal/ubuntu/ raring/main libnih1 amd64 1.0.3-4ubuntu12 [54.8 kB] Get:9 http://ftpmaster.internal/ubuntu/ raring/main libc6-dev amd64 2.16-0ubuntu3 [3054 kB] Get:10 http://ftpmaster.internal/ubuntu/ raring/main libc-dev-bin amd64 2.16-0ubuntu3 [80.9 kB] Get:11 http://ftpmaster.internal/ubuntu/ raring/main libc6 amd64 2.16-0ubuntu3 [4708 kB] Get:12 http://ftpmaster.internal/ubuntu/ raring/main libc-bin amd64 2.16-0ubuntu3 [1188 kB] Get:13 http://ftpmaster.internal/ubuntu/ raring-proposed/main libitm1 amd64 4.7.2-5ubuntu4 [36.2 kB] Get:14 http://ftpmaster.internal/ubuntu/ raring-proposed/main libgomp1 amd64 4.7.2-5ubuntu4 [27.3 kB] Get:15 http://ftpmaster.internal/ubuntu/ raring-proposed/main gcc-4.7-base amd64 4.7.2-5ubuntu4 [16.3 kB] Get:16 http://ftpmaster.internal/ubuntu/ raring-proposed/main libgcc1 amd64 1:4.7.2-5ubuntu4 [42.9 kB] Get:17 http://ftpmaster.internal/ubuntu/ raring-proposed/main cpp-4.7 amd64 4.7.2-5ubuntu4 [5412 kB] Get:18 http://ftpmaster.internal/ubuntu/ raring-proposed/main libquadmath0 amd64 4.7.2-5ubuntu4 [125 kB] Get:19 http://ftpmaster.internal/ubuntu/ raring-proposed/main libgcc-4.7-dev amd64 4.7.2-5ubuntu4 [2464 kB] Get:20 http://ftpmaster.internal/ubuntu/ raring-proposed/main libstdc++6-4.7-dev amd64 4.7.2-5ubuntu4 [1738 kB] Get:21 http://ftpmaster.internal/ubuntu/ raring-proposed/main g++-4.7 amd64 4.7.2-5ubuntu4 [5856 kB] Get:22 http://ftpmaster.internal/ubuntu/ raring-proposed/main gcc-4.7 amd64 4.7.2-5ubuntu4 [6055 kB] Get:23 http://ftpmaster.internal/ubuntu/ raring-proposed/main libstdc++6 amd64 4.7.2-5ubuntu4 [321 kB] Get:24 http://ftpmaster.internal/ubuntu/ raring/main libusb-0.1-4 amd64 2:0.1.12-23+nmu1 [17.7 kB] Get:25 http://ftpmaster.internal/ubuntu/ raring/main libkmod2 amd64 9-2ubuntu1 [43.2 kB] Get:26 http://ftpmaster.internal/ubuntu/ raring/main libsqlite3-0 amd64 3.7.14.1-1 [366 kB] Get:27 http://ftpmaster.internal/ubuntu/ raring/main libpcre3 amd64 1:8.31-1 [159 kB] Get:28 http://ftpmaster.internal/ubuntu/ raring/main libglib2.0-0 amd64 2.34.1-1 [967 kB] Get:29 http://ftpmaster.internal/ubuntu/ raring/main lsb-base all 4.0-0ubuntu27 [10.3 kB] Get:30 http://ftpmaster.internal/ubuntu/ raring/main module-init-tools all 9-2ubuntu1 [1856 B] Get:31 http://ftpmaster.internal/ubuntu/ raring/main kmod amd64 9-2ubuntu1 [61.0 kB] Get:32 http://ftpmaster.internal/ubuntu/ raring/main libsasl2-2 amd64 2.1.25.dfsg1-6 [69.6 kB] Get:33 http://ftpmaster.internal/ubuntu/ raring/main multiarch-support amd64 2.16-0ubuntu3 [4486 B] Get:34 http://ftpmaster.internal/ubuntu/ raring/main adduser all 3.113+nmu3ubuntu1 [168 kB] Get:35 http://ftpmaster.internal/ubuntu/ raring-proposed/main busybox-initramfs amd64 1:1.20.0-7ubuntu2 [203 kB] Get:36 http://ftpmaster.internal/ubuntu/ raring/main makedev all 2.3.1-92ubuntu1 [27.3 kB] Get:37 http://ftpmaster.internal/ubuntu/ raring/main dpkg-dev all 1.16.9ubuntu1 [712 kB] Get:38 http://ftpmaster.internal/ubuntu/ raring/main libdpkg-perl all 1.16.9ubuntu1 [188 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 45.6 MB in 3s (13.3 MB/s) (Reading database ... 12364 files and directories currently installed.) Preparing to replace base-files 6.5ubuntu11 (using .../base-files_6.11ubuntu3_amd64.deb) ... Unpacking replacement base-files ... Setting up base-files (6.11ubuntu3) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12366 files and directories currently installed.) Preparing to replace dpkg 1.16.7ubuntu6 (using .../dpkg_1.16.9ubuntu1_amd64.deb) ... Unpacking replacement dpkg ... Setting up dpkg (1.16.9ubuntu1) ... (Reading database ... 12375 files and directories currently installed.) Preparing to replace perl 5.14.2-13 (using .../perl_5.14.2-14_amd64.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.14.2-13 (using .../perl-base_5.14.2-14_amd64.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.14.2-14) ... (Reading database ... 12376 files and directories currently installed.) Preparing to replace perl-modules 5.14.2-13 (using .../perl-modules_5.14.2-14_all.deb) ... Unpacking replacement perl-modules ... Selecting previously unselected package libcap2:amd64. Unpacking libcap2:amd64 (from .../libcap2_1%3a2.22-1ubuntu4_amd64.deb) ... Setting up libcap2:amd64 (1:2.22-1ubuntu4) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12381 files and directories currently installed.) Preparing to replace libnih-dbus1:amd64 1.0.3-4ubuntu11 (using .../libnih-dbus1_1.0.3-4ubuntu12_amd64.deb) ... Unpacking replacement libnih-dbus1:amd64 ... Preparing to replace libnih1:amd64 1.0.3-4ubuntu11 (using .../libnih1_1.0.3-4ubuntu12_amd64.deb) ... Unpacking replacement libnih1:amd64 ... Preparing to replace libc6-dev:amd64 2.15-0ubuntu20 (using .../libc6-dev_2.16-0ubuntu3_amd64.deb) ... Unpacking replacement libc6-dev:amd64 ... Preparing to replace libc-dev-bin 2.15-0ubuntu20 (using .../libc-dev-bin_2.16-0ubuntu3_amd64.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace libc6:amd64 2.15-0ubuntu20 (using .../libc6_2.16-0ubuntu3_amd64.deb) ... Checking for services that may need to be restarted... Checking init scripts... Checking for services that may need to be restarted... Checking init scripts... Nothing to restart. Unpacking replacement libc6:amd64 ... Setting up libc6:amd64 (2.16-0ubuntu3) ... Checking for services that may need to be restarted... Checking init scripts... Nothing to restart. Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12389 files and directories currently installed.) Preparing to replace libc-bin 2.15-0ubuntu20 (using .../libc-bin_2.16-0ubuntu3_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.16-0ubuntu3) ... Installing new version of config file /etc/gai.conf ... (Reading database ... 12389 files and directories currently installed.) Preparing to replace libitm1:amd64 4.7.2-2ubuntu1 (using .../libitm1_4.7.2-5ubuntu4_amd64.deb) ... Unpacking replacement libitm1:amd64 ... Preparing to replace libgomp1:amd64 4.7.2-2ubuntu1 (using .../libgomp1_4.7.2-5ubuntu4_amd64.deb) ... Unpacking replacement libgomp1:amd64 ... Preparing to replace gcc-4.7-base:amd64 4.7.2-2ubuntu1 (using .../gcc-4.7-base_4.7.2-5ubuntu4_amd64.deb) ... Unpacking replacement gcc-4.7-base:amd64 ... Setting up gcc-4.7-base:amd64 (4.7.2-5ubuntu4) ... (Reading database ... 12389 files and directories currently installed.) Preparing to replace libgcc1:amd64 1:4.7.2-2ubuntu1 (using .../libgcc1_1%3a4.7.2-5ubuntu4_amd64.deb) ... Unpacking replacement libgcc1:amd64 ... Setting up libgcc1:amd64 (1:4.7.2-5ubuntu4) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12389 files and directories currently installed.) Preparing to replace cpp-4.7 4.7.2-2ubuntu1 (using .../cpp-4.7_4.7.2-5ubuntu4_amd64.deb) ... Unpacking replacement cpp-4.7 ... Preparing to replace libquadmath0:amd64 4.7.2-2ubuntu1 (using .../libquadmath0_4.7.2-5ubuntu4_amd64.deb) ... Unpacking replacement libquadmath0:amd64 ... Selecting previously unselected package libgcc-4.7-dev:amd64. Unpacking libgcc-4.7-dev:amd64 (from .../libgcc-4.7-dev_4.7.2-5ubuntu4_amd64.deb) ... Replacing files in old package gcc-4.7 ... Preparing to replace libstdc++6-4.7-dev 4.7.2-2ubuntu1 (using .../libstdc++6-4.7-dev_4.7.2-5ubuntu4_amd64.deb) ... Unpacking replacement libstdc++6-4.7-dev:amd64 ... Preparing to replace g++-4.7 4.7.2-2ubuntu1 (using .../g++-4.7_4.7.2-5ubuntu4_amd64.deb) ... Unpacking replacement g++-4.7 ... Preparing to replace gcc-4.7 4.7.2-2ubuntu1 (using .../gcc-4.7_4.7.2-5ubuntu4_amd64.deb) ... Unpacking replacement gcc-4.7 ... Preparing to replace libstdc++6:amd64 4.7.2-2ubuntu1 (using .../libstdc++6_4.7.2-5ubuntu4_amd64.deb) ... Unpacking replacement libstdc++6:amd64 ... Setting up libstdc++6:amd64 (4.7.2-5ubuntu4) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12396 files and directories currently installed.) Preparing to replace libusb-0.1-4:amd64 2:0.1.12-23 (using .../libusb-0.1-4_2%3a0.1.12-23+nmu1_amd64.deb) ... Unpacking replacement libusb-0.1-4:amd64 ... Setting up libusb-0.1-4:amd64 (2:0.1.12-23+nmu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Selecting previously unselected package libkmod2:amd64. (Reading database ... 12396 files and directories currently installed.) Unpacking libkmod2:amd64 (from .../libkmod2_9-2ubuntu1_amd64.deb) ... Preparing to replace libsqlite3-0:amd64 3.7.13-1 (using .../libsqlite3-0_3.7.14.1-1_amd64.deb) ... Unpacking replacement libsqlite3-0:amd64 ... Preparing to replace libpcre3:amd64 1:8.30-5ubuntu1 (using .../libpcre3_1%3a8.31-1_amd64.deb) ... Unpacking replacement libpcre3:amd64 ... Preparing to replace libglib2.0-0:amd64 2.34.0-1ubuntu1 (using .../libglib2.0-0_2.34.1-1_amd64.deb) ... Unpacking replacement libglib2.0-0:amd64 ... Preparing to replace lsb-base 4.0-0ubuntu26 (using .../lsb-base_4.0-0ubuntu27_all.deb) ... Unpacking replacement lsb-base ... Setting up lsb-base (4.0-0ubuntu27) ... (Reading database ... 12401 files and directories currently installed.) Preparing to replace module-init-tools 3.16-1ubuntu6 (using .../module-init-tools_9-2ubuntu1_all.deb) ... Unpacking replacement module-init-tools ... dpkg: warning: unable to delete old directory '/etc/depmod.d': Directory not empty Selecting previously unselected package kmod. Unpacking kmod (from .../kmod_9-2ubuntu1_amd64.deb) ... Preparing to replace libsasl2-2:amd64 2.1.25.dfsg1-5 (using .../libsasl2-2_2.1.25.dfsg1-6_amd64.deb) ... Unpacking replacement libsasl2-2:amd64 ... Preparing to replace multiarch-support 2.15-0ubuntu20 (using .../multiarch-support_2.16-0ubuntu3_amd64.deb) ... Unpacking replacement multiarch-support ... Setting up multiarch-support (2.16-0ubuntu3) ... (Reading database ... 12403 files and directories currently installed.) Preparing to replace adduser 3.113+nmu1ubuntu1 (using .../adduser_3.113+nmu3ubuntu1_all.deb) ... Unpacking replacement adduser ... Preparing to replace busybox-initramfs 1:1.19.3-7ubuntu1 (using .../busybox-initramfs_1%3a1.20.0-7ubuntu2_amd64.deb) ... Unpacking replacement busybox-initramfs ... Preparing to replace makedev 2.3.1-91ubuntu2 (using .../makedev_2.3.1-92ubuntu1_all.deb) ... Unpacking replacement makedev ... Preparing to replace dpkg-dev 1.16.7ubuntu6 (using .../dpkg-dev_1.16.9ubuntu1_all.deb) ... Unpacking replacement dpkg-dev ... Preparing to replace libdpkg-perl 1.16.7ubuntu6 (using .../libdpkg-perl_1.16.9ubuntu1_all.deb) ... Unpacking replacement libdpkg-perl ... Setting up libnih1:amd64 (1.0.3-4ubuntu12) ... Setting up libnih-dbus1:amd64 (1.0.3-4ubuntu12) ... Setting up libc-dev-bin (2.16-0ubuntu3) ... Setting up libc6-dev:amd64 (2.16-0ubuntu3) ... Setting up libitm1:amd64 (4.7.2-5ubuntu4) ... Setting up libgomp1:amd64 (4.7.2-5ubuntu4) ... Setting up cpp-4.7 (4.7.2-5ubuntu4) ... Setting up libquadmath0:amd64 (4.7.2-5ubuntu4) ... Setting up libgcc-4.7-dev:amd64 (4.7.2-5ubuntu4) ... Setting up libstdc++6-4.7-dev:amd64 (4.7.2-5ubuntu4) ... Setting up gcc-4.7 (4.7.2-5ubuntu4) ... Setting up g++-4.7 (4.7.2-5ubuntu4) ... Setting up libkmod2:amd64 (9-2ubuntu1) ... Setting up libsqlite3-0:amd64 (3.7.14.1-1) ... Setting up libpcre3:amd64 (1:8.31-1) ... Setting up libglib2.0-0:amd64 (2.34.1-1) ... No schema files found: doing nothing. Setting up kmod (9-2ubuntu1) ... Setting up module-init-tools (9-2ubuntu1) ... Setting up libsasl2-2:amd64 (2.1.25.dfsg1-6) ... Setting up adduser (3.113+nmu3ubuntu1) ... Setting up busybox-initramfs (1:1.20.0-7ubuntu2) ... Setting up makedev (2.3.1-92ubuntu1) ... Setting up perl-modules (5.14.2-14) ... Setting up perl (5.14.2-14) ... Setting up libdpkg-perl (1.16.9ubuntu1) ... Setting up dpkg-dev (1.16.9ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'c38deec18984b60b961d322821b98a8cd6a26e47', 'amd64', 'raring-proposed', '--nolog', '--batch', '--archive=ubuntu', '--dist=raring-proposed', '--purpose=PRIMARY', '--architecture=amd64', '--comp=universe', 'jags_3.3.0-1.dsc'] Initiating build c38deec18984b60b961d322821b98a8cd6a26e47 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 3.2.0-30-generic #48-Ubuntu SMP Fri Aug 24 16:52:48 UTC 2012 x86_64 Automatic build of jags_3.3.0-1 on allspice by sbuild/amd64 1.170.5 Build started at 20121029-0418 ****************************************************************************** jags_3.3.0-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 7.0.50~), gfortran, liblapack-dev, libltdl-dev (>= 2.2.6b), texlive-base, texlive-latex-base, texlive-generic-recommended, texlive-fonts-recommended, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, texinfo Checking for already installed source dependencies... debhelper: missing gfortran: missing liblapack-dev: missing libltdl-dev: missing texlive-base: missing texlive-latex-base: missing texlive-generic-recommended: missing texlive-fonts-recommended: missing texlive-extra-utils: missing texlive-latex-recommended: missing texlive-latex-extra: missing texinfo: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper gfortran liblapack-dev libltdl-dev texlive-base texlive-latex-base texlive-generic-recommended texlive-fonts-recommended texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils dh-apparmor ed file fontconfig-config gettext gettext-base gfortran-4.7 groff-base html2text intltool-debian libasprintf0c2 libblas-dev libblas3 libcroco3 libexpat1 libfontconfig1 libfreetype6 libgettextpo0 libgfortran-4.7-dev libgfortran3 libgraphite3 libice6 libjbig0 libjpeg-turbo8 libjpeg8 libkpathsea6 liblapack3 liblcms2-2 libltdl7 libmagic1 libpaper-utils libpaper1 libpipeline1 libpoppler28 libptexenc1 libsm6 libtiff5 libunistring0 libx11-6 libx11-data libxau6 libxaw7 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxt6 luatex man-db mime-support po-debconf preview-latex-style python python2.7 tex-common texlive-binaries texlive-common texlive-doc-base texlive-pictures ttf-dejavu-core ttf-marvosym ucf x11-common xdg-utils Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc gfortran-multilib gfortran-doc gfortran-4.7-multilib gfortran-4.7-doc libgfortran3-dbg groff liblcms2-utils libtool-doc poppler-data less www-browser libmail-box-perl python-doc python-tk python2.7-doc texinfo-doc-nonfree perl-tk xpdf-reader pdf-viewer ghostscript gv postscript-viewer purifyeps chktex latexmk dvipng xindy dvidvi fragmaster lacheck latexdiff libfile-which-perl dot2tex gvfs-bin Recommended packages: curl wget lynx-cur libtool xml-core texlive-luatex libmail-sendmail-perl doc-base lmodern ruby wish texlive-fonts-recommended-doc tex-gyre tipa texlive-latex-base-doc texlive-latex-extra-doc latex-xcolor texlive-latex-recommended-doc latex-beamer prosper texlive-pictures-doc pgf libfile-mimeinfo-perl x11-utils x11-xserver-utils The following NEW packages will be installed: bsdmainutils debhelper dh-apparmor ed file fontconfig-config gettext gettext-base gfortran gfortran-4.7 groff-base html2text intltool-debian libasprintf0c2 libblas-dev libblas3 libcroco3 libexpat1 libfontconfig1 libfreetype6 libgettextpo0 libgfortran-4.7-dev libgfortran3 libgraphite3 libice6 libjbig0 libjpeg-turbo8 libjpeg8 libkpathsea6 liblapack-dev liblapack3 liblcms2-2 libltdl-dev libltdl7 libmagic1 libpaper-utils libpaper1 libpipeline1 libpoppler28 libptexenc1 libsm6 libtiff5 libunistring0 libx11-6 libx11-data libxau6 libxaw7 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxt6 luatex man-db mime-support po-debconf preview-latex-style python python2.7 tex-common texinfo texlive-base texlive-binaries texlive-common texlive-doc-base texlive-extra-utils texlive-fonts-recommended texlive-generic-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures ttf-dejavu-core ttf-marvosym ucf x11-common xdg-utils 0 upgraded, 79 newly installed, 0 to remove and 0 not upgraded. Need to get 95.7 MB of archives. After this operation, 275 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libmagic1 libexpat1 libasprintf0c2 libpipeline1 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libxext6 ucf ttf-dejavu-core fontconfig-config libxml2 libcroco3 libfreetype6 libfontconfig1 libunistring0 libgettextpo0 libgfortran3 x11-common libice6 libjpeg-turbo8 liblcms2-2 libltdl7 libpaper1 libjpeg8 libjbig0 libtiff5 libpoppler28 libsm6 libxt6 libxmu6 libxpm4 libxaw7 tex-common libkpathsea6 luatex file mime-support bsdmainutils ed gettext-base groff-base man-db html2text gettext intltool-debian po-debconf dh-apparmor debhelper libgfortran-4.7-dev gfortran-4.7 gfortran libblas3 libblas-dev libgraphite3 liblapack3 liblapack-dev libltdl-dev libpaper-utils libptexenc1 preview-latex-style python2.7 python texinfo texlive-common texlive-doc-base texlive-binaries xdg-utils texlive-base texlive-extra-utils ttf-marvosym texlive-fonts-recommended texlive-generic-recommended texlive-latex-base texlive-latex-recommended texlive-pictures texlive-latex-extra Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ raring/main libmagic1 amd64 5.11-2 [171 kB] Get:2 http://ftpmaster.internal/ubuntu/ raring/main libexpat1 amd64 2.1.0-1ubuntu1 [129 kB] Get:3 http://ftpmaster.internal/ubuntu/ raring/main libasprintf0c2 amd64 0.18.1.1-9ubuntu1 [6762 B] Get:4 http://ftpmaster.internal/ubuntu/ raring/main libpipeline1 amd64 1.2.2-1 [26.9 kB] Get:5 http://ftpmaster.internal/ubuntu/ raring/main libxau6 amd64 1:1.0.7-1 [8592 B] Get:6 http://ftpmaster.internal/ubuntu/ raring/main libxdmcp6 amd64 1:1.1.1-1 [12.8 kB] Get:7 http://ftpmaster.internal/ubuntu/ raring/main libxcb1 amd64 1.8.1-1ubuntu1 [44.8 kB] Get:8 http://ftpmaster.internal/ubuntu/ raring/main libx11-data all 2:1.5.0-1 [181 kB] Get:9 http://ftpmaster.internal/ubuntu/ raring/main libx11-6 amd64 2:1.5.0-1 [771 kB] Get:10 http://ftpmaster.internal/ubuntu/ raring/main libxext6 amd64 2:1.3.1-2 [33.7 kB] Get:11 http://ftpmaster.internal/ubuntu/ raring/main ucf all 3.0025+nmu3 [55.0 kB] Get:12 http://ftpmaster.internal/ubuntu/ raring/main ttf-dejavu-core all 2.33-2ubuntu1 [1552 kB] Get:13 http://ftpmaster.internal/ubuntu/ raring/main fontconfig-config all 2.10.1-0ubuntu3 [46.3 kB] Get:14 http://ftpmaster.internal/ubuntu/ raring/main libxml2 amd64 2.8.0+dfsg1-5ubuntu2 [679 kB] Get:15 http://ftpmaster.internal/ubuntu/ raring/main libcroco3 amd64 0.6.6-1 [100.0 kB] Get:16 http://ftpmaster.internal/ubuntu/ raring/main libfreetype6 amd64 2.4.10-0ubuntu1 [344 kB] Get:17 http://ftpmaster.internal/ubuntu/ raring/main libfontconfig1 amd64 2.10.1-0ubuntu3 [135 kB] Get:18 http://ftpmaster.internal/ubuntu/ raring/main libunistring0 amd64 0.9.3-5build1 [430 kB] Get:19 http://ftpmaster.internal/ubuntu/ raring/main libgettextpo0 amd64 0.18.1.1-9ubuntu1 [123 kB] Get:20 http://ftpmaster.internal/ubuntu/ raring-proposed/main libgfortran3 amd64 4.7.2-5ubuntu4 [349 kB] Get:21 http://ftpmaster.internal/ubuntu/ raring/main x11-common all 1:7.7+1ubuntu4 [58.1 kB] Get:22 http://ftpmaster.internal/ubuntu/ raring/main libice6 amd64 2:1.0.8-2 [47.0 kB] Get:23 http://ftpmaster.internal/ubuntu/ raring/main libjpeg-turbo8 amd64 1.2.1-0ubuntu2 [114 kB] Get:24 http://ftpmaster.internal/ubuntu/ raring/main liblcms2-2 amd64 2.2+git20110628-2ubuntu4 [145 kB] Get:25 http://ftpmaster.internal/ubuntu/ raring/main libltdl7 amd64 2.4.2-1ubuntu2 [38.2 kB] Get:26 http://ftpmaster.internal/ubuntu/ raring/main libpaper1 amd64 1.1.24+nmu2 [14.5 kB] Get:27 http://ftpmaster.internal/ubuntu/ raring/main libjpeg8 amd64 8c-2ubuntu7 [2112 B] Get:28 http://ftpmaster.internal/ubuntu/ raring/main libjbig0 amd64 2.0-2ubuntu1 [28.6 kB] Get:29 http://ftpmaster.internal/ubuntu/ raring/main libtiff5 amd64 4.0.2-1ubuntu2 [167 kB] Get:30 http://ftpmaster.internal/ubuntu/ raring/main libpoppler28 amd64 0.20.4-0ubuntu1 [880 kB] Get:31 http://ftpmaster.internal/ubuntu/ raring/main libsm6 amd64 2:1.2.1-2 [18.1 kB] Get:32 http://ftpmaster.internal/ubuntu/ raring/main libxt6 amd64 1:1.1.3-1 [187 kB] Get:33 http://ftpmaster.internal/ubuntu/ raring/main libxmu6 amd64 2:1.1.1-1 [53.8 kB] Get:34 http://ftpmaster.internal/ubuntu/ raring/main libxpm4 amd64 1:3.5.10-1 [38.3 kB] Get:35 http://ftpmaster.internal/ubuntu/ raring/main libxaw7 amd64 2:1.0.10-2 [204 kB] Get:36 http://ftpmaster.internal/ubuntu/ raring/main tex-common all 3.13 [626 kB] Get:37 http://ftpmaster.internal/ubuntu/ raring/main libkpathsea6 amd64 2012.20120628-3build1 [72.6 kB] Get:38 http://ftpmaster.internal/ubuntu/ raring/main luatex amd64 0.70.1.20120524-3build2 [2419 kB] Get:39 http://ftpmaster.internal/ubuntu/ raring/main file amd64 5.11-2 [18.3 kB] Get:40 http://ftpmaster.internal/ubuntu/ raring/main mime-support all 3.52-1ubuntu1 [31.3 kB] Get:41 http://ftpmaster.internal/ubuntu/ raring/main bsdmainutils amd64 9.0.3ubuntu1 [201 kB] Get:42 http://ftpmaster.internal/ubuntu/ raring/main ed amd64 1.6-2 [51.6 kB] Get:43 http://ftpmaster.internal/ubuntu/ raring/main gettext-base amd64 0.18.1.1-9ubuntu1 [77.2 kB] Get:44 http://ftpmaster.internal/ubuntu/ raring/main groff-base amd64 1.21-9 [1044 kB] Get:45 http://ftpmaster.internal/ubuntu/ raring/main man-db amd64 2.6.3-1 [757 kB] Get:46 http://ftpmaster.internal/ubuntu/ raring/main html2text amd64 1.3.2a-15build1 [93.3 kB] Get:47 http://ftpmaster.internal/ubuntu/ raring/main gettext amd64 0.18.1.1-9ubuntu1 [1206 kB] Get:48 http://ftpmaster.internal/ubuntu/ raring/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:49 http://ftpmaster.internal/ubuntu/ raring/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:50 http://ftpmaster.internal/ubuntu/ raring/main dh-apparmor all 2.8.0-0ubuntu6 [9688 B] Get:51 http://ftpmaster.internal/ubuntu/ raring/main debhelper all 9.20120608ubuntu1 [623 kB] Get:52 http://ftpmaster.internal/ubuntu/ raring-proposed/main libgfortran-4.7-dev amd64 4.7.2-5ubuntu4 [441 kB] Get:53 http://ftpmaster.internal/ubuntu/ raring-proposed/main gfortran-4.7 amd64 4.7.2-5ubuntu4 [5737 kB] Get:54 http://ftpmaster.internal/ubuntu/ raring/main gfortran amd64 4:4.7.2-1ubuntu2 [1206 B] Get:55 http://ftpmaster.internal/ubuntu/ raring/main libblas3 amd64 1.2.20110419-5 [287 kB] Get:56 http://ftpmaster.internal/ubuntu/ raring/main libblas-dev amd64 1.2.20110419-5 [301 kB] Get:57 http://ftpmaster.internal/ubuntu/ raring/main libgraphite3 amd64 1:2.3.1-0.2build1 [186 kB] Get:58 http://ftpmaster.internal/ubuntu/ raring/main liblapack3 amd64 3.4.1-6 [5025 kB] Get:59 http://ftpmaster.internal/ubuntu/ raring/main liblapack-dev amd64 3.4.1-6 [5544 kB] Get:60 http://ftpmaster.internal/ubuntu/ raring/main libltdl-dev amd64 2.4.2-1ubuntu2 [205 kB] Get:61 http://ftpmaster.internal/ubuntu/ raring/main libpaper-utils amd64 1.1.24+nmu2 [9116 B] Get:62 http://ftpmaster.internal/ubuntu/ raring/main libptexenc1 amd64 2012.20120628-3build1 [38.6 kB] Get:63 http://ftpmaster.internal/ubuntu/ raring/main preview-latex-style all 11.86-2ubuntu2 [55.1 kB] Get:64 http://ftpmaster.internal/ubuntu/ raring/main python2.7 amd64 2.7.3-5ubuntu4 [2708 kB] Get:65 http://ftpmaster.internal/ubuntu/ raring/main python amd64 2.7.3-0ubuntu7 [167 kB] Get:66 http://ftpmaster.internal/ubuntu/ raring/main texinfo amd64 4.13a.dfsg.1-10ubuntu2 [458 kB] Get:67 http://ftpmaster.internal/ubuntu/ raring/main texlive-common all 2012.20120611-5 [191 kB] Get:68 http://ftpmaster.internal/ubuntu/ raring/main texlive-doc-base all 2012.20120611-1 [1650 kB] Get:69 http://ftpmaster.internal/ubuntu/ raring/main texlive-binaries amd64 2012.20120628-3build1 [17.3 MB] Get:70 http://ftpmaster.internal/ubuntu/ raring/main xdg-utils all 1.1.0~rc1-2ubuntu6 [66.6 kB] Get:71 http://ftpmaster.internal/ubuntu/ raring/main texlive-base all 2012.20120611-5 [14.2 MB] Get:72 http://ftpmaster.internal/ubuntu/ raring/main texlive-extra-utils all 2012.20120611-2 [2539 kB] Get:73 http://ftpmaster.internal/ubuntu/ raring/main ttf-marvosym all 0.1+dfsg-2 [46.9 kB] Get:74 http://ftpmaster.internal/ubuntu/ raring/main texlive-fonts-recommended all 2012.20120611-5 [5466 kB] Get:75 http://ftpmaster.internal/ubuntu/ raring/main texlive-generic-recommended all 2012.20120611-5 [2119 kB] Get:76 http://ftpmaster.internal/ubuntu/ raring/main texlive-latex-base all 2012.20120611-5 [871 kB] Get:77 http://ftpmaster.internal/ubuntu/ raring/main texlive-latex-recommended all 2012.20120611-5 [6758 kB] Get:78 http://ftpmaster.internal/ubuntu/ raring/main texlive-pictures all 2012.20120611-5 [2254 kB] Get:79 http://ftpmaster.internal/ubuntu/ raring/main texlive-latex-extra all 2012.20120611-2 [6374 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 95.7 MB in 6s (13.8 MB/s) Selecting previously unselected package libmagic1:amd64. (Reading database ... 12449 files and directories currently installed.) Unpacking libmagic1:amd64 (from .../libmagic1_5.11-2_amd64.deb) ... Selecting previously unselected package libexpat1:amd64. Unpacking libexpat1:amd64 (from .../libexpat1_2.1.0-1ubuntu1_amd64.deb) ... Selecting previously unselected package libasprintf0c2:amd64. Unpacking libasprintf0c2:amd64 (from .../libasprintf0c2_0.18.1.1-9ubuntu1_amd64.deb) ... Selecting previously unselected package libpipeline1:amd64. Unpacking libpipeline1:amd64 (from .../libpipeline1_1.2.2-1_amd64.deb) ... Selecting previously unselected package libxau6:amd64. Unpacking libxau6:amd64 (from .../libxau6_1%3a1.0.7-1_amd64.deb) ... Selecting previously unselected package libxdmcp6:amd64. Unpacking libxdmcp6:amd64 (from .../libxdmcp6_1%3a1.1.1-1_amd64.deb) ... Selecting previously unselected package libxcb1:amd64. Unpacking libxcb1:amd64 (from .../libxcb1_1.8.1-1ubuntu1_amd64.deb) ... Selecting previously unselected package libx11-data. 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Unpacking texlive-generic-recommended (from .../texlive-generic-recommended_2012.20120611-5_all.deb) ... Selecting previously unselected package texlive-latex-base. Unpacking texlive-latex-base (from .../texlive-latex-base_2012.20120611-5_all.deb) ... Selecting previously unselected package texlive-latex-recommended. Unpacking texlive-latex-recommended (from .../texlive-latex-recommended_2012.20120611-5_all.deb) ... Selecting previously unselected package texlive-pictures. Unpacking texlive-pictures (from .../texlive-pictures_2012.20120611-5_all.deb) ... Selecting previously unselected package texlive-latex-extra. Unpacking texlive-latex-extra (from .../texlive-latex-extra_2012.20120611-2_all.deb) ... Setting up libmagic1:amd64 (5.11-2) ... Setting up libexpat1:amd64 (2.1.0-1ubuntu1) ... Setting up libasprintf0c2:amd64 (0.18.1.1-9ubuntu1) ... Setting up libpipeline1:amd64 (1.2.2-1) ... Setting up libxau6:amd64 (1:1.0.7-1) ... Setting up libxdmcp6:amd64 (1:1.1.1-1) ... Setting up libxcb1:amd64 (1.8.1-1ubuntu1) ... Setting up libx11-data (2:1.5.0-1) ... Setting up libx11-6:amd64 (2:1.5.0-1) ... Setting up libxext6:amd64 (2:1.3.1-2) ... Setting up ucf (3.0025+nmu3) ... Setting up ttf-dejavu-core (2.33-2ubuntu1) ... Setting up fontconfig-config (2.10.1-0ubuntu3) ... Setting up libxml2:amd64 (2.8.0+dfsg1-5ubuntu2) ... Setting up libcroco3:amd64 (0.6.6-1) ... Setting up libfreetype6:amd64 (2.4.10-0ubuntu1) ... Setting up libfontconfig1:amd64 (2.10.1-0ubuntu3) ... Setting up libunistring0:amd64 (0.9.3-5build1) ... Setting up libgettextpo0:amd64 (0.18.1.1-9ubuntu1) ... Setting up libgfortran3:amd64 (4.7.2-5ubuntu4) ... Setting up x11-common (1:7.7+1ubuntu4) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6:amd64 (2:1.0.8-2) ... Setting up libjpeg-turbo8:amd64 (1.2.1-0ubuntu2) ... Setting up liblcms2-2:amd64 (2.2+git20110628-2ubuntu4) ... Setting up libltdl7:amd64 (2.4.2-1ubuntu2) ... Setting up libpaper1:amd64 (1.1.24+nmu2) ... Creating config file /etc/papersize with new version Setting up libjpeg8:amd64 (8c-2ubuntu7) ... Setting up libjbig0:amd64 (2.0-2ubuntu1) ... Setting up libtiff5:amd64 (4.0.2-1ubuntu2) ... Setting up libpoppler28:amd64 (0.20.4-0ubuntu1) ... Setting up libsm6:amd64 (2:1.2.1-2) ... Setting up libxt6:amd64 (1:1.1.3-1) ... Setting up libxmu6:amd64 (2:1.1.1-1) ... Setting up libxpm4:amd64 (1:3.5.10-1) ... Setting up libxaw7:amd64 (2:1.0.10-2) ... Setting up tex-common (3.13) ... Running mktexlsr. This may take some time... done. texlive-base is not ready, delaying updmap-sys call texlive-base is not ready, skipping fmtutil-sys --all call Setting up libkpathsea6 (2012.20120628-3build1) ... Setting up luatex (0.70.1.20120524-3build2) ... texlive-base is not ready, cannot create formats Setting up file (5.11-2) ... Setting up mime-support (3.52-1ubuntu1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode Setting up bsdmainutils (9.0.3ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up ed (1.6-2) ... Setting up gettext-base (0.18.1.1-9ubuntu1) ... Setting up groff-base (1.21-9) ... Setting up man-db (2.6.3-1) ... Building database of manual pages ... Setting up html2text (1.3.2a-15build1) ... Setting up gettext (0.18.1.1-9ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up dh-apparmor (2.8.0-0ubuntu6) ... Setting up debhelper (9.20120608ubuntu1) ... Setting up libgfortran-4.7-dev:amd64 (4.7.2-5ubuntu4) ... Setting up gfortran-4.7 (4.7.2-5ubuntu4) ... Setting up gfortran (4:4.7.2-1ubuntu2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode Setting up libblas3 (1.2.20110419-5) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up libblas-dev (1.2.20110419-5) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up libgraphite3 (1:2.3.1-0.2build1) ... Setting up liblapack3 (3.4.1-6) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up liblapack-dev (3.4.1-6) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode Setting up libltdl-dev:amd64 (2.4.2-1ubuntu2) ... Setting up libpaper-utils (1.1.24+nmu2) ... Setting up libptexenc1 (2012.20120628-3build1) ... Setting up preview-latex-style (11.86-2ubuntu2) ... Setting up python2.7 (2.7.3-5ubuntu4) ... Setting up python (2.7.3-0ubuntu7) ... Setting up texinfo (4.13a.dfsg.1-10ubuntu2) ... Running mktexlsr. This may take some time. ... done. Setting up texlive-common (2012.20120611-5) ... Setting up texlive-doc-base (2012.20120611-1) ... Setting up texlive-binaries (2012.20120628-3build1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Building format(s) --refresh. This may take some time... done. Setting up xdg-utils (1.1.0~rc1-2ubuntu6) ... Setting up ttf-marvosym (0.1+dfsg-2) ... Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Setting up texlive-base (2012.20120611-5) ... /usr/bin/tl-paper: setting paper size for dvips to a4. /usr/bin/tl-paper: setting paper size for dvipdfmx to a4. /usr/bin/tl-paper: setting paper size for xdvi to a4. /usr/bin/tl-paper: setting paper size for pdftex to a4. Running mktexlsr. This may take some time... done. Building format(s) --all. This may take some time... done. Processing triggers for tex-common ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up texlive-generic-recommended (2012.20120611-5) ... Setting up texlive-latex-base (2012.20120611-5) ... Running mktexlsr. This may take some time... done. Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-latex-base.cnf. This may take some time... done. Setting up texlive-pictures (2012.20120611-5) ... Setting up texlive-extra-utils (2012.20120611-2) ... Setting up texlive-fonts-recommended (2012.20120611-5) ... Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up texlive-latex-recommended (2012.20120611-5) ... Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Setting up texlive-latex-extra (2012.20120611-2) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.16-0ubuntu3 make_3.81-8.2ubuntu2 dpkg-dev_1.16.9ubuntu1 gcc-4.7_4.7.2-5ubuntu4 g++-4.7_4.7.2-5ubuntu4 binutils_2.22.90.20120924-0ubuntu2 libstdc++6-4.7-dev_4.7.2-5ubuntu4 libstdc++6_4.7.2-5ubuntu4 ------------------------------------------------------------------------------ gpgv: Signature made Tue Oct 2 11:20:16 2012 UTC using DSA key ID 91B0D3B7 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./jags_3.3.0-1.dsc dpkg-source: info: extracting jags in jags-3.3.0 dpkg-source: info: unpacking jags_3.3.0.orig.tar.gz dpkg-source: info: applying jags_3.3.0-1.diff.gz dpkg-buildpackage: source package jags dpkg-buildpackage: source version 3.3.0-1 dpkg-source --before-build jags-3.3.0 dpkg-buildpackage: host architecture amd64 /usr/bin/fakeroot debian/rules clean dh clean dh_testdir dh_auto_clean dh_clean debian/rules build-arch dh build-arch dh_testdir -a debian/rules override_dh_auto_configure make[1]: Entering directory `/build/buildd/jags-3.3.0' dh_auto_configure -- --without-included-ltdl configure: WARNING: unrecognized options: --disable-maintainer-mode checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking how to print strings... printf checking for style of include used by make... 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(cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. -ldl -lgfortran -lm -lquadmath checking if sgemm_ is being linked in already... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for sgemm_ in -lmkl... no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for sin in -lm... yes checking whether expm1 exists and is declared... yes checking whether log1p exists and is declared... yes checking for working log... yes checking for working log1p... yes configure: creating ./config.status config.status: creating Makefile config.status: creating m4/Makefile config.status: creating etc/Makefile config.status: creating etc/jags.pc config.status: creating libltdl/Makefile config.status: creating src/Makefile config.status: creating src/lib/Makefile config.status: creating src/lib/version.cc config.status: creating src/lib/util/Makefile config.status: creating src/lib/sarray/Makefile config.status: creating src/lib/function/Makefile config.status: creating src/lib/distribution/Makefile config.status: creating src/lib/graph/Makefile config.status: creating src/lib/sampler/Makefile config.status: creating src/lib/model/Makefile config.status: creating 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config.status: creating src/modules/base/monitors/Makefile config.status: creating src/modules/bugs/Makefile config.status: creating src/modules/bugs/functions/Makefile config.status: creating src/modules/bugs/distributions/Makefile config.status: creating src/modules/bugs/samplers/Makefile config.status: creating src/modules/bugs/matrix/Makefile config.status: creating src/modules/msm/Makefile config.status: creating src/modules/msm/functions/Makefile config.status: creating src/modules/msm/distributions/Makefile config.status: creating src/modules/msm/matrix/Makefile config.status: creating src/modules/mix/Makefile config.status: creating src/modules/mix/distributions/Makefile config.status: creating src/modules/mix/samplers/Makefile config.status: creating src/modules/dic/Makefile config.status: creating src/modules/lecuyer/Makefile config.status: creating src/modules/glm/Makefile config.status: creating src/modules/glm/CSparse/Makefile config.status: creating src/modules/glm/SSparse/Makefile config.status: creating src/modules/glm/SSparse/UFconfig/Makefile config.status: creating src/modules/glm/SSparse/AMD/Makefile config.status: creating src/modules/glm/SSparse/COLAMD/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Check/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Cholesky/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Core/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Include/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/MatrixOps/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Modify/Makefile config.status: creating src/modules/glm/SSparse/CHOLMOD/Supernodal/Makefile config.status: creating src/modules/glm/samplers/Makefile config.status: creating src/terminal/Makefile config.status: creating win/Makefile config.status: creating win/runtime32/Makefile config.status: creating win/runtime64/Makefile config.status: creating doc/Makefile config.status: creating doc/manual/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory `/build/buildd/jags-3.3.0' debian/rules override_dh_auto_build make[1]: Entering directory `/build/buildd/jags-3.3.0' make make[2]: Entering directory `/build/buildd/jags-3.3.0' make all-recursive make[3]: Entering directory `/build/buildd/jags-3.3.0' Making all in m4 make[4]: Entering directory `/build/buildd/jags-3.3.0/m4' make[4]: Nothing to be done for `all'. make[4]: Leaving directory `/build/buildd/jags-3.3.0/m4' Making all in libltdl make[4]: Entering directory `/build/buildd/jags-3.3.0/libltdl' make all-am make[5]: Entering directory `/build/buildd/jags-3.3.0/libltdl' /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. 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-I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c Round.cc -fPIC -DPIC -o .libs/bugsfunc_la-Round.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-Trunc.lo `test -f 'Trunc.cc' || echo './'`Trunc.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c Trunc.cc -fPIC -DPIC -o .libs/bugsfunc_la-Trunc.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-Pow.lo `test -f 'Pow.cc' || echo './'`Pow.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c Pow.cc -fPIC -DPIC -o .libs/bugsfunc_la-Pow.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-Equals.lo `test -f 'Equals.cc' || echo './'`Equals.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c Equals.cc -fPIC -DPIC -o .libs/bugsfunc_la-Equals.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-Prod.lo `test -f 'Prod.cc' || echo './'`Prod.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c Prod.cc -fPIC -DPIC -o .libs/bugsfunc_la-Prod.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-MatMult.lo `test -f 'MatMult.cc' || echo './'`MatMult.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c MatMult.cc -fPIC -DPIC -o .libs/bugsfunc_la-MatMult.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-Transpose.lo `test -f 'Transpose.cc' || echo './'`Transpose.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c Transpose.cc -fPIC -DPIC -o .libs/bugsfunc_la-Transpose.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-DSumFunc.lo `test -f 'DSumFunc.cc' || echo './'`DSumFunc.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c DSumFunc.cc -fPIC -DPIC -o .libs/bugsfunc_la-DSumFunc.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-DIntervalFunc.lo `test -f 'DIntervalFunc.cc' || echo './'`DIntervalFunc.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c DIntervalFunc.cc -fPIC -DPIC -o .libs/bugsfunc_la-DIntervalFunc.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-DPQFunction.lo `test -f 'DPQFunction.cc' || echo './'`DPQFunction.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c DPQFunction.cc -fPIC -DPIC -o .libs/bugsfunc_la-DPQFunction.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-DFunction.lo `test -f 'DFunction.cc' || echo './'`DFunction.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c DFunction.cc -fPIC -DPIC -o .libs/bugsfunc_la-DFunction.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-PFunction.lo `test -f 'PFunction.cc' || echo './'`PFunction.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c PFunction.cc -fPIC -DPIC -o .libs/bugsfunc_la-PFunction.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-QFunction.lo `test -f 'QFunction.cc' || echo './'`QFunction.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c QFunction.cc -fPIC -DPIC -o .libs/bugsfunc_la-QFunction.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-DRoundFunc.lo `test -f 'DRoundFunc.cc' || echo './'`DRoundFunc.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c DRoundFunc.cc -fPIC -DPIC -o .libs/bugsfunc_la-DRoundFunc.o /bin/bash ../../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c -o bugsfunc_la-IfElse.lo `test -f 'IfElse.cc' || echo './'`IfElse.cc libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../.. -I../../../../src/include -I../../../../src/modules/bugs/matrix -I../../../../src/modules/bugs/distributions -g -O2 -c IfElse.cc -fPIC -DPIC -o .libs/bugsfunc_la-IfElse.o /bin/bash ../../../../libtool --tag=CXX --mode=link g++ -g -O2 -no-undefined -module -avoid-version -o bugsfunc.la bugsfunc_la-Max.lo bugsfunc_la-Probit.lo bugsfunc_la-InProd.lo bugsfunc_la-Mean.lo bugsfunc_la-SD.lo bugsfunc_la-ICLogLog.lo bugsfunc_la-Min.lo bugsfunc_la-Sqrt.lo bugsfunc_la-CLogLog.lo bugsfunc_la-ILogit.lo bugsfunc_la-Step.lo bugsfunc_la-Log.lo bugsfunc_la-Sum.lo bugsfunc_la-Exp.lo bugsfunc_la-LogFact.lo bugsfunc_la-LogGam.lo bugsfunc_la-Phi.lo bugsfunc_la-Logit.lo bugsfunc_la-Inverse.lo bugsfunc_la-LogDet.lo 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-c -o cs_tdfs.lo cs_tdfs.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_tdfs.c -fPIC -DPIC -o .libs/cs_tdfs.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_malloc.lo cs_malloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_malloc.c -fPIC -DPIC -o .libs/cs_malloc.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_transpose.lo cs_transpose.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_transpose.c -fPIC -DPIC -o .libs/cs_transpose.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_compress.lo cs_compress.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_compress.c -fPIC -DPIC -o .libs/cs_compress.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_usolve.lo cs_usolve.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_usolve.c -fPIC -DPIC -o .libs/cs_usolve.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_utsolve.lo cs_utsolve.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_utsolve.c -fPIC -DPIC -o .libs/cs_utsolve.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_scc.lo cs_scc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_scc.c -fPIC -DPIC -o .libs/cs_scc.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_maxtrans.lo cs_maxtrans.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_maxtrans.c -fPIC -DPIC -o .libs/cs_maxtrans.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_dmperm.lo cs_dmperm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_dmperm.c -fPIC -DPIC -o .libs/cs_dmperm.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_updown.lo cs_updown.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_updown.c -fPIC -DPIC -o .libs/cs_updown.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_print.lo cs_print.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_print.c -fPIC -DPIC -o .libs/cs_print.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_norm.lo cs_norm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_norm.c -fPIC -DPIC -o .libs/cs_norm.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_load.lo cs_load.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_load.c -fPIC -DPIC -o .libs/cs_load.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_dfs.lo cs_dfs.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_dfs.c -fPIC -DPIC -o .libs/cs_dfs.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_reach.lo cs_reach.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_reach.c -fPIC -DPIC -o .libs/cs_reach.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_spsolve.lo cs_spsolve.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_spsolve.c -fPIC -DPIC -o .libs/cs_spsolve.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_ereach.lo cs_ereach.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_ereach.c -fPIC -DPIC -o .libs/cs_ereach.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_leaf.lo cs_leaf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_leaf.c -fPIC -DPIC -o .libs/cs_leaf.o /bin/bash ../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c -o cs_randperm.lo cs_randperm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../.. -g -O2 -c cs_randperm.c -fPIC -DPIC -o .libs/cs_randperm.o /bin/bash ../../../../libtool --tag=CC --mode=link gcc -g -O2 -no-undefined -module -avoid-version -o csparse.la cs_add.lo cs_amd.lo cs_chol.lo cs_cholsol.lo cs_counts.lo cs_cumsum.lo cs_droptol.lo cs_dropzeros.lo cs_dupl.lo cs_entry.lo cs_etree.lo cs_fkeep.lo cs_gaxpy.lo cs_happly.lo cs_house.lo cs_ipvec.lo cs_lsolve.lo cs_ltsolve.lo cs_lu.lo cs_lusol.lo cs_util.lo cs_multiply.lo cs_permute.lo cs_pinv.lo cs_post.lo cs_pvec.lo cs_qr.lo cs_qrsol.lo cs_scatter.lo cs_schol.lo cs_sqr.lo cs_symperm.lo cs_tdfs.lo cs_malloc.lo cs_transpose.lo cs_compress.lo cs_usolve.lo cs_utsolve.lo cs_scc.lo cs_maxtrans.lo cs_dmperm.lo cs_updown.lo cs_print.lo cs_norm.lo cs_load.lo cs_dfs.lo cs_reach.lo cs_spsolve.lo cs_ereach.lo cs_leaf.lo cs_randperm.lo -lm -ldl libtool: link: ar cru .libs/csparse.a .libs/cs_add.o .libs/cs_amd.o .libs/cs_chol.o .libs/cs_cholsol.o .libs/cs_counts.o .libs/cs_cumsum.o .libs/cs_droptol.o .libs/cs_dropzeros.o .libs/cs_dupl.o .libs/cs_entry.o .libs/cs_etree.o .libs/cs_fkeep.o .libs/cs_gaxpy.o .libs/cs_happly.o .libs/cs_house.o .libs/cs_ipvec.o .libs/cs_lsolve.o .libs/cs_ltsolve.o .libs/cs_lu.o .libs/cs_lusol.o .libs/cs_util.o .libs/cs_multiply.o .libs/cs_permute.o .libs/cs_pinv.o .libs/cs_post.o .libs/cs_pvec.o .libs/cs_qr.o .libs/cs_qrsol.o .libs/cs_scatter.o .libs/cs_schol.o .libs/cs_sqr.o .libs/cs_symperm.o .libs/cs_tdfs.o .libs/cs_malloc.o .libs/cs_transpose.o .libs/cs_compress.o .libs/cs_usolve.o .libs/cs_utsolve.o .libs/cs_scc.o .libs/cs_maxtrans.o .libs/cs_dmperm.o .libs/cs_updown.o .libs/cs_print.o .libs/cs_norm.o .libs/cs_load.o .libs/cs_dfs.o .libs/cs_reach.o .libs/cs_spsolve.o .libs/cs_ereach.o .libs/cs_leaf.o .libs/cs_randperm.o libtool: link: ranlib .libs/csparse.a libtool: link: ( cd ".libs" && rm -f "csparse.la" && ln -s "../csparse.la" "csparse.la" ) make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/CSparse' Making all in SSparse make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse' Making all in UFconfig make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/UFconfig' make[8]: Nothing to be done for `all'. make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/UFconfig' Making all in AMD make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/AMD' /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_1.lo `test -f 'Source/amd_1.c' || echo './'`Source/amd_1.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_1.c -fPIC -DPIC -o .libs/amd_la-amd_1.o /bin/bash ../../../../../libtool --tag=F77 --mode=compile gfortran -g -O2 -c -o amdbar.lo `test -f 'Source/amdbar.f' || echo './'`Source/amdbar.f libtool: compile: gfortran -g -O2 -c Source/amdbar.f -fPIC -o .libs/amdbar.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_dump.lo `test -f 'Source/amd_dump.c' || echo './'`Source/amd_dump.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_dump.c -fPIC -DPIC -o .libs/amd_la-amd_dump.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_info.lo `test -f 'Source/amd_info.c' || echo './'`Source/amd_info.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_info.c -fPIC -DPIC -o .libs/amd_la-amd_info.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_post_tree.lo `test -f 'Source/amd_post_tree.c' || echo './'`Source/amd_post_tree.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_post_tree.c -fPIC -DPIC -o .libs/amd_la-amd_post_tree.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_2.lo `test -f 'Source/amd_2.c' || echo './'`Source/amd_2.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_2.c -fPIC -DPIC -o .libs/amd_la-amd_2.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_control.lo `test -f 'Source/amd_control.c' || echo './'`Source/amd_control.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_control.c -fPIC -DPIC -o .libs/amd_la-amd_control.o /bin/bash ../../../../../libtool --tag=F77 --mode=compile gfortran -g -O2 -c -o amd.lo `test -f 'Source/amd.f' || echo './'`Source/amd.f libtool: compile: gfortran -g -O2 -c Source/amd.f -fPIC -o .libs/amd.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_order.lo `test -f 'Source/amd_order.c' || echo './'`Source/amd_order.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_order.c -fPIC -DPIC -o .libs/amd_la-amd_order.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_preprocess.lo `test -f 'Source/amd_preprocess.c' || echo './'`Source/amd_preprocess.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_preprocess.c -fPIC -DPIC -o .libs/amd_la-amd_preprocess.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_aat.lo `test -f 'Source/amd_aat.c' || echo './'`Source/amd_aat.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_aat.c -fPIC -DPIC -o .libs/amd_la-amd_aat.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_defaults.lo `test -f 'Source/amd_defaults.c' || echo './'`Source/amd_defaults.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_defaults.c -fPIC -DPIC -o .libs/amd_la-amd_defaults.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_global.lo `test -f 'Source/amd_global.c' || echo './'`Source/amd_global.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_global.c -fPIC -DPIC -o .libs/amd_la-amd_global.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_postorder.lo `test -f 'Source/amd_postorder.c' || echo './'`Source/amd_postorder.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_postorder.c -fPIC -DPIC -o .libs/amd_la-amd_postorder.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c -o amd_la-amd_valid.lo `test -f 'Source/amd_valid.c' || echo './'`Source/amd_valid.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/AMD/Include -g -O2 -c Source/amd_valid.c -fPIC -DPIC -o .libs/amd_la-amd_valid.o /bin/bash ../../../../../libtool --tag=F77 --mode=link gfortran -g -O2 -no-undefined -module -avoid-version -o amd.la amd_la-amd_1.lo amdbar.lo amd_la-amd_dump.lo amd_la-amd_info.lo amd_la-amd_post_tree.lo amd_la-amd_2.lo amd_la-amd_control.lo amd.lo amd_la-amd_order.lo amd_la-amd_preprocess.lo amd_la-amd_aat.lo amd_la-amd_defaults.lo amd_la-amd_global.lo amd_la-amd_postorder.lo amd_la-amd_valid.lo -lm -ldl libtool: link: ar cru .libs/amd.a .libs/amd_la-amd_1.o .libs/amdbar.o .libs/amd_la-amd_dump.o .libs/amd_la-amd_info.o .libs/amd_la-amd_post_tree.o .libs/amd_la-amd_2.o .libs/amd_la-amd_control.o .libs/amd.o .libs/amd_la-amd_order.o .libs/amd_la-amd_preprocess.o .libs/amd_la-amd_aat.o .libs/amd_la-amd_defaults.o .libs/amd_la-amd_global.o .libs/amd_la-amd_postorder.o .libs/amd_la-amd_valid.o libtool: link: ranlib .libs/amd.a libtool: link: ( cd ".libs" && rm -f "amd.la" && ln -s "../amd.la" "amd.la" ) make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/AMD' Making all in COLAMD make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/COLAMD' /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c -o colamd_la-colamd.lo `test -f 'Source/colamd.c' || echo './'`Source/colamd.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c Source/colamd.c -fPIC -DPIC -o .libs/colamd_la-colamd.o /bin/bash ../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c -o colamd_la-colamd_global.lo `test -f 'Source/colamd_global.c' || echo './'`Source/colamd_global.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c Source/colamd_global.c -fPIC -DPIC -o .libs/colamd_la-colamd_global.o /bin/bash ../../../../../libtool --tag=CC --mode=link gcc -g -O2 -no-undefined -module -avoid-version -o colamd.la colamd_la-colamd.lo colamd_la-colamd_global.lo -lm -ldl libtool: link: ar cru .libs/colamd.a .libs/colamd_la-colamd.o .libs/colamd_la-colamd_global.o libtool: link: ranlib .libs/colamd.a libtool: link: ( cd ".libs" && rm -f "colamd.la" && ln -s "../colamd.la" "colamd.la" ) make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/COLAMD' Making all in CHOLMOD make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD' Making all in Check make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Check' /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcheck_la-cholmod_check.lo `test -f 'cholmod_check.c' || echo './'`cholmod_check.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_check.c -fPIC -DPIC -o .libs/cholmodcheck_la-cholmod_check.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcheck_la-cholmod_read.lo `test -f 'cholmod_read.c' || echo './'`cholmod_read.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_read.c -fPIC -DPIC -o .libs/cholmodcheck_la-cholmod_read.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcheck_la-cholmod_write.lo `test -f 'cholmod_write.c' || echo './'`cholmod_write.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_write.c -fPIC -DPIC -o .libs/cholmodcheck_la-cholmod_write.o /bin/bash ../../../../../../libtool --tag=CC --mode=link gcc -g -O2 -no-undefined -module -avoid-version -o cholmodcheck.la cholmodcheck_la-cholmod_check.lo cholmodcheck_la-cholmod_read.lo cholmodcheck_la-cholmod_write.lo -lm -ldl libtool: link: ar cru .libs/cholmodcheck.a .libs/cholmodcheck_la-cholmod_check.o .libs/cholmodcheck_la-cholmod_read.o .libs/cholmodcheck_la-cholmod_write.o libtool: link: ranlib .libs/cholmodcheck.a libtool: link: ( cd ".libs" && rm -f "cholmodcheck.la" && ln -s "../cholmodcheck.la" "cholmodcheck.la" ) make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Check' Making all in Cholesky make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c -o cholmodcholesky_la-cholmod_amd.lo `test -f 'cholmod_amd.c' || echo './'`cholmod_amd.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c cholmod_amd.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_amd.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c -o cholmodcholesky_la-cholmod_analyze.lo `test -f 'cholmod_analyze.c' || echo './'`cholmod_analyze.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c cholmod_analyze.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_analyze.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c -o cholmodcholesky_la-cholmod_colamd.lo `test -f 'cholmod_colamd.c' || echo './'`cholmod_colamd.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c cholmod_colamd.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_colamd.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c -o cholmodcholesky_la-cholmod_etree.lo `test -f 'cholmod_etree.c' || echo './'`cholmod_etree.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c cholmod_etree.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_etree.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c -o cholmodcholesky_la-cholmod_factorize.lo `test -f 'cholmod_factorize.c' || echo './'`cholmod_factorize.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c cholmod_factorize.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_factorize.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c -o cholmodcholesky_la-cholmod_postorder.lo `test -f 'cholmod_postorder.c' || echo './'`cholmod_postorder.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c cholmod_postorder.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_postorder.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c -o cholmodcholesky_la-cholmod_rcond.lo `test 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-I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c cholmod_resymbol.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_resymbol.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c -o cholmodcholesky_la-cholmod_rowcolcounts.lo `test -f 'cholmod_rowcolcounts.c' || echo './'`cholmod_rowcolcounts.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c cholmod_rowcolcounts.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_rowcolcounts.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c -o cholmodcholesky_la-cholmod_rowfac.lo `test -f 'cholmod_rowfac.c' || echo './'`cholmod_rowfac.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c cholmod_rowfac.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_rowfac.o /bin/bash 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-I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c -o cholmodcholesky_la-cholmod_spsolve.lo `test -f 'cholmod_spsolve.c' || echo './'`cholmod_spsolve.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -I../../../../../../src/modules/glm/SSparse/AMD/Include -I../../../../../../src/modules/glm/SSparse/COLAMD/Include -g -O2 -c cholmod_spsolve.c -fPIC -DPIC -o .libs/cholmodcholesky_la-cholmod_spsolve.o /bin/bash ../../../../../../libtool --tag=CC --mode=link gcc -g -O2 -no-undefined -module -avoid-version -o cholmodcholesky.la cholmodcholesky_la-cholmod_amd.lo cholmodcholesky_la-cholmod_analyze.lo cholmodcholesky_la-cholmod_colamd.lo cholmodcholesky_la-cholmod_etree.lo cholmodcholesky_la-cholmod_factorize.lo cholmodcholesky_la-cholmod_postorder.lo cholmodcholesky_la-cholmod_rcond.lo cholmodcholesky_la-cholmod_resymbol.lo cholmodcholesky_la-cholmod_rowcolcounts.lo cholmodcholesky_la-cholmod_rowfac.lo cholmodcholesky_la-cholmod_solve.lo cholmodcholesky_la-cholmod_spsolve.lo -lm -ldl libtool: link: ar cru .libs/cholmodcholesky.a .libs/cholmodcholesky_la-cholmod_amd.o .libs/cholmodcholesky_la-cholmod_analyze.o .libs/cholmodcholesky_la-cholmod_colamd.o .libs/cholmodcholesky_la-cholmod_etree.o .libs/cholmodcholesky_la-cholmod_factorize.o .libs/cholmodcholesky_la-cholmod_postorder.o .libs/cholmodcholesky_la-cholmod_rcond.o .libs/cholmodcholesky_la-cholmod_resymbol.o .libs/cholmodcholesky_la-cholmod_rowcolcounts.o .libs/cholmodcholesky_la-cholmod_rowfac.o .libs/cholmodcholesky_la-cholmod_solve.o .libs/cholmodcholesky_la-cholmod_spsolve.o libtool: link: ranlib .libs/cholmodcholesky.a libtool: link: ( cd ".libs" && rm -f "cholmodcholesky.la" && ln -s "../cholmodcholesky.la" "cholmodcholesky.la" ) make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' Making all in Core make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Core' /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcore_la-cholmod_aat.lo `test -f 'cholmod_aat.c' || echo './'`cholmod_aat.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_aat.c -fPIC -DPIC -o .libs/cholmodcore_la-cholmod_aat.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcore_la-cholmod_copy.lo `test -f 'cholmod_copy.c' || echo './'`cholmod_copy.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_copy.c -fPIC -DPIC -o .libs/cholmodcore_la-cholmod_copy.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcore_la-cholmod_transpose.lo `test -f 'cholmod_transpose.c' || echo './'`cholmod_transpose.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_transpose.c -fPIC -DPIC -o .libs/cholmodcore_la-cholmod_transpose.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcore_la-cholmod_add.lo `test -f 'cholmod_add.c' || echo './'`cholmod_add.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_add.c -fPIC -DPIC -o .libs/cholmodcore_la-cholmod_add.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcore_la-cholmod_dense.lo `test -f 'cholmod_dense.c' || echo './'`cholmod_dense.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c 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-I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcore_la-cholmod_change_factor.lo `test -f 'cholmod_change_factor.c' || echo './'`cholmod_change_factor.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_change_factor.c -fPIC -DPIC -o .libs/cholmodcore_la-cholmod_change_factor.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcore_la-cholmod_factor.lo `test -f 'cholmod_factor.c' || echo './'`cholmod_factor.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_factor.c -fPIC -DPIC -o .libs/cholmodcore_la-cholmod_factor.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcore_la-cholmod_common.lo `test -f 'cholmod_common.c' || echo './'`cholmod_common.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_common.c -fPIC -DPIC -o .libs/cholmodcore_la-cholmod_common.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcore_la-cholmod_memory.lo `test -f 'cholmod_memory.c' || echo './'`cholmod_memory.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_memory.c -fPIC -DPIC -o .libs/cholmodcore_la-cholmod_memory.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcore_la-cholmod_complex.lo `test -f 'cholmod_complex.c' || echo './'`cholmod_complex.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_complex.c -fPIC -DPIC -o .libs/cholmodcore_la-cholmod_complex.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodcore_la-cholmod_sparse.lo `test -f 'cholmod_sparse.c' || echo './'`cholmod_sparse.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_sparse.c -fPIC -DPIC -o .libs/cholmodcore_la-cholmod_sparse.o /bin/bash ../../../../../../libtool --tag=CC --mode=link gcc -g -O2 -no-undefined -module -avoid-version -o cholmodcore.la cholmodcore_la-cholmod_aat.lo cholmodcore_la-cholmod_copy.lo cholmodcore_la-cholmod_transpose.lo cholmodcore_la-cholmod_add.lo cholmodcore_la-cholmod_dense.lo cholmodcore_la-cholmod_triplet.lo cholmodcore_la-cholmod_band.lo cholmodcore_la-cholmod_error.lo cholmodcore_la-cholmod_change_factor.lo cholmodcore_la-cholmod_factor.lo cholmodcore_la-cholmod_common.lo cholmodcore_la-cholmod_memory.lo cholmodcore_la-cholmod_complex.lo cholmodcore_la-cholmod_sparse.lo -lm -ldl libtool: link: ar cru .libs/cholmodcore.a .libs/cholmodcore_la-cholmod_aat.o .libs/cholmodcore_la-cholmod_copy.o .libs/cholmodcore_la-cholmod_transpose.o .libs/cholmodcore_la-cholmod_add.o .libs/cholmodcore_la-cholmod_dense.o .libs/cholmodcore_la-cholmod_triplet.o .libs/cholmodcore_la-cholmod_band.o .libs/cholmodcore_la-cholmod_error.o .libs/cholmodcore_la-cholmod_change_factor.o .libs/cholmodcore_la-cholmod_factor.o .libs/cholmodcore_la-cholmod_common.o .libs/cholmodcore_la-cholmod_memory.o .libs/cholmodcore_la-cholmod_complex.o .libs/cholmodcore_la-cholmod_sparse.o libtool: link: ranlib .libs/cholmodcore.a libtool: link: ( cd ".libs" && rm -f "cholmodcore.la" && ln -s "../cholmodcore.la" "cholmodcore.la" ) make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Core' Making all in Include make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Include' make[9]: Nothing to be done for `all'. make[9]: Leaving directory 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cholmodmatrix_la-cholmod_scale.lo `test -f 'cholmod_scale.c' || echo './'`cholmod_scale.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_scale.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_scale.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodmatrix_la-cholmod_submatrix.lo `test -f 'cholmod_submatrix.c' || echo './'`cholmod_submatrix.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_submatrix.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_submatrix.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodmatrix_la-cholmod_horzcat.lo `test -f 'cholmod_horzcat.c' || echo './'`cholmod_horzcat.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_horzcat.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_horzcat.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodmatrix_la-cholmod_sdmult.lo `test -f 'cholmod_sdmult.c' || echo './'`cholmod_sdmult.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_sdmult.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_sdmult.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodmatrix_la-cholmod_symmetry.lo `test -f 'cholmod_symmetry.c' || echo './'`cholmod_symmetry.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_symmetry.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_symmetry.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodmatrix_la-cholmod_norm.lo `test -f 'cholmod_norm.c' || echo './'`cholmod_norm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_norm.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_norm.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodmatrix_la-cholmod_ssmult.lo `test -f 'cholmod_ssmult.c' || echo './'`cholmod_ssmult.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_ssmult.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_ssmult.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodmatrix_la-cholmod_vertcat.lo `test -f 'cholmod_vertcat.c' || echo './'`cholmod_vertcat.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_vertcat.c -fPIC -DPIC -o .libs/cholmodmatrix_la-cholmod_vertcat.o /bin/bash ../../../../../../libtool --tag=CC --mode=link gcc -g -O2 -no-undefined -module -avoid-version -o cholmodmatrix.la cholmodmatrix_la-cholmod_drop.lo cholmodmatrix_la-cholmod_scale.lo cholmodmatrix_la-cholmod_submatrix.lo cholmodmatrix_la-cholmod_horzcat.lo cholmodmatrix_la-cholmod_sdmult.lo cholmodmatrix_la-cholmod_symmetry.lo cholmodmatrix_la-cholmod_norm.lo cholmodmatrix_la-cholmod_ssmult.lo cholmodmatrix_la-cholmod_vertcat.lo -lm -ldl libtool: link: ar cru .libs/cholmodmatrix.a .libs/cholmodmatrix_la-cholmod_drop.o .libs/cholmodmatrix_la-cholmod_scale.o .libs/cholmodmatrix_la-cholmod_submatrix.o .libs/cholmodmatrix_la-cholmod_horzcat.o .libs/cholmodmatrix_la-cholmod_sdmult.o .libs/cholmodmatrix_la-cholmod_symmetry.o .libs/cholmodmatrix_la-cholmod_norm.o .libs/cholmodmatrix_la-cholmod_ssmult.o .libs/cholmodmatrix_la-cholmod_vertcat.o libtool: link: ranlib .libs/cholmodmatrix.a libtool: link: ( cd ".libs" && rm -f "cholmodmatrix.la" && ln -s "../cholmodmatrix.la" "cholmodmatrix.la" ) make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps' Making all in Modify make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Modify' /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodmodify_la-cholmod_rowadd.lo `test -f 'cholmod_rowadd.c' || echo './'`cholmod_rowadd.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_rowadd.c -fPIC -DPIC -o .libs/cholmodmodify_la-cholmod_rowadd.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodmodify_la-cholmod_updown.lo `test -f 'cholmod_updown.c' || echo './'`cholmod_updown.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_updown.c -fPIC -DPIC -o .libs/cholmodmodify_la-cholmod_updown.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodmodify_la-cholmod_rowdel.lo `test -f 'cholmod_rowdel.c' || echo './'`cholmod_rowdel.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_rowdel.c -fPIC -DPIC -o .libs/cholmodmodify_la-cholmod_rowdel.o /bin/bash ../../../../../../libtool --tag=CC --mode=link gcc -g -O2 -no-undefined -module -avoid-version -o cholmodmodify.la cholmodmodify_la-cholmod_rowadd.lo cholmodmodify_la-cholmod_updown.lo cholmodmodify_la-cholmod_rowdel.lo -lm -ldl libtool: link: ar cru .libs/cholmodmodify.a .libs/cholmodmodify_la-cholmod_rowadd.o .libs/cholmodmodify_la-cholmod_updown.o .libs/cholmodmodify_la-cholmod_rowdel.o libtool: link: ranlib .libs/cholmodmodify.a libtool: link: ( cd ".libs" && rm -f "cholmodmodify.la" && ln -s "../cholmodmodify.la" "cholmodmodify.la" ) make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Modify' Making all in Supernodal make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Supernodal' /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodsupernodal_la-cholmod_super_numeric.lo `test -f 'cholmod_super_numeric.c' || echo './'`cholmod_super_numeric.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_super_numeric.c -fPIC -DPIC -o .libs/cholmodsupernodal_la-cholmod_super_numeric.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodsupernodal_la-cholmod_super_symbolic.lo `test -f 'cholmod_super_symbolic.c' || echo './'`cholmod_super_symbolic.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_super_symbolic.c -fPIC -DPIC -o .libs/cholmodsupernodal_la-cholmod_super_symbolic.o /bin/bash ../../../../../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c -o cholmodsupernodal_la-cholmod_super_solve.lo `test -f 'cholmod_super_solve.c' || echo './'`cholmod_super_solve.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../../../../.. -I../../../../../../src/modules/glm/SSparse/UFconfig -I../../../../../../src/modules/glm/SSparse/CHOLMOD/Include -g -O2 -c cholmod_super_solve.c -fPIC -DPIC -o .libs/cholmodsupernodal_la-cholmod_super_solve.o /bin/bash ../../../../../../libtool --tag=CC --mode=link gcc -g -O2 -no-undefined -module -avoid-version -o cholmodsupernodal.la cholmodsupernodal_la-cholmod_super_numeric.lo cholmodsupernodal_la-cholmod_super_symbolic.lo cholmodsupernodal_la-cholmod_super_solve.lo -lm -ldl libtool: link: ar cru .libs/cholmodsupernodal.a .libs/cholmodsupernodal_la-cholmod_super_numeric.o .libs/cholmodsupernodal_la-cholmod_super_symbolic.o .libs/cholmodsupernodal_la-cholmod_super_solve.o libtool: link: ranlib .libs/cholmodsupernodal.a libtool: link: ( cd ".libs" && rm -f "cholmodsupernodal.la" && ln -s "../cholmodsupernodal.la" "cholmodsupernodal.la" ) make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Supernodal' make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD' /bin/bash ../../../../../libtool --tag=CC --mode=link gcc -g -O2 -no-undefined -module -avoid-version -o cholmod.la Cholesky/cholmodcholesky.la Core/cholmodcore.la MatrixOps/cholmodmatrix.la Modify/cholmodmodify.la Supernodal/cholmodsupernodal.la Check/cholmodcheck.la -lm -ldl libtool: link: (cd .libs/cholmod.lax/cholmodcholesky.a && ar x "/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Cholesky/.libs/cholmodcholesky.a") libtool: link: (cd .libs/cholmod.lax/cholmodcore.a && ar x "/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Core/.libs/cholmodcore.a") libtool: link: (cd .libs/cholmod.lax/cholmodmatrix.a && ar x "/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps/.libs/cholmodmatrix.a") libtool: link: (cd .libs/cholmod.lax/cholmodmodify.a && ar x "/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Modify/.libs/cholmodmodify.a") libtool: link: (cd .libs/cholmod.lax/cholmodsupernodal.a && ar x 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.libs/dic_la-CalKLApprox.o .libs/dic_la-PDTrace.o .libs/dic_la-PDTraceFactory.o .libs/dic_la-KLBern.o -Wl,-rpath -Wl,/build/buildd/jags-3.3.0/src/lib/.libs ../../../src/lib/.libs/libjags.so -ldl -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/4.7/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-soname -Wl,dic.so -o .libs/dic.so libtool: link: ( cd ".libs" && rm -f "dic.la" && ln -s "../dic.la" "dic.la" ) make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/dic' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules' make[6]: Nothing to be done for `all-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules' Making all in terminal make[5]: Entering directory `/build/buildd/jags-3.3.0/src/terminal' make all-am make[6]: Entering directory `/build/buildd/jags-3.3.0/src/terminal' g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -g -O2 -c -o jags_terminal-parser.o `test -f 'parser.cc' || echo './'`parser.cc parser.yy: In function 'void doSystem(const string*)': parser.yy:1425:34: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -g -O2 -c -o jags_terminal-scanner.o `test -f 'scanner.cc' || echo './'`scanner.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/include -g -O2 -c -o jags_terminal-ReadData.o `test -f 'ReadData.cc' || echo './'`ReadData.cc /bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -o jags-terminal jags_terminal-parser.o jags_terminal-scanner.o jags_terminal-ReadData.o -lltdl ../../src/lib/libjags.la -dlopen ../../src/modules/base/basemod.la -dlopen ../../src/modules/bugs/bugs.la -dlopen ../../src/modules/dic/dic.la -dlopen ../../src/modules/glm/glm.la -dlopen ../../src/modules/lecuyer/lecuyer.la -dlopen ../../src/modules/mix/mix.la -dlopen ../../src/modules/msm/msm.la -lm -ldl libtool: link: rm -f .libs/jags-terminal.nm .libs/jags-terminal.nmS .libs/jags-terminal.nmT libtool: link: (cd .libs && gcc -g -O2 -c -fno-builtin "jags-terminalS.c") libtool: link: rm -f ".libs/jags-terminalS.c" ".libs/jags-terminal.nm" ".libs/jags-terminal.nmS" ".libs/jags-terminal.nmT" libtool: link: g++ -g -O2 -o .libs/jags-terminal jags_terminal-parser.o jags_terminal-scanner.o jags_terminal-ReadData.o .libs/jags-terminalS.o /usr/lib/x86_64-linux-gnu/libltdl.so ../../src/lib/.libs/libjags.so -lm -ldl rm -f jags jags.tmp jterm=`echo jags-terminal | sed -e 's,x,x,'`; \ sed -e 's,@jagsmoddir\@,/usr/lib/JAGS/modules-3,g' -e 's,@libexecdir\@,/usr/lib/jags,g' -e 's,@libdir\@,/usr/lib,g' -e "s,@jterm\@,${jterm},g" ./jags.in > jags.tmp chmod +x jags.tmp mv jags.tmp jags make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/terminal' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/terminal' make[5]: Entering directory `/build/buildd/jags-3.3.0/src' make[5]: Nothing to be done for `all-am'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/src' make[4]: Leaving directory `/build/buildd/jags-3.3.0/src' Making all in etc make[4]: Entering directory `/build/buildd/jags-3.3.0/etc' make[4]: Nothing to be done for `all'. make[4]: Leaving directory `/build/buildd/jags-3.3.0/etc' Making all in win make[4]: Entering directory `/build/buildd/jags-3.3.0/win' Making all in runtime32 make[5]: Entering directory `/build/buildd/jags-3.3.0/win/runtime32' make[5]: Nothing to be done for `all'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/win/runtime32' Making all in runtime64 make[5]: Entering directory `/build/buildd/jags-3.3.0/win/runtime64' make[5]: Nothing to be 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`/build/buildd/jags-3.3.0' (cd doc/manual && make docs && ls) make[2]: Entering directory `/build/buildd/jags-3.3.0/doc/manual' TEXINPUTS=".:$TEXINPUTS" pdflatex jags_user_manual.tex This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/Debian) restricted \write18 enabled. entering extended mode (./jags_user_manual.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. 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(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] No file jags_user_manual.toc. [1] Chapter 1. [2] Chapter 2. [3] Package natbib Warning: Citation `appendix:data' on page 4 undefined on input l ine 134. LaTeX Warning: Reference `section:obfun' on page 4 undefined on input line 137. [4] [5] LaTeX Warning: Reference `section:data:tranformations' on page 6 undefined on i nput line 232. [6] Package natbib Warning: Citation `appendix:data' on page 7 undefined on input l ine 290. [7] LaTeX Warning: Reference `parameters:to' on page 8 undefined on input line 363. LaTeX Warning: Reference `set:factory' on page 8 undefined on input line 409. [8] LaTeX Warning: Reference `samplers:to' on page 9 undefined on input line 413. LaTeX Warning: Reference `section:adapt' on page 9 undefined on input line 448. 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[12] Package natbib Warning: Citation `spiegelhalter:etal:2002' on page 13 undefined on input line 717. [13] Overfull \hbox (16.27263pt too wide) in paragraph at lines 731--737 \OT1/cmr/m/n/10.95 If the named node has a trace mon-i-tor, this dumps the mon- i-tored val-ues of to files \OT1/cmtt/m/n/10.95 CODAindex.txt\OT1/cmr/m/n/10.95 , LaTeX Warning: Reference `data:in' on page 14 undefined on input line 754. LaTeX Warning: Reference `parameters:in' on page 14 undefined on input line 767 . (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [14] LaTeX Warning: Reference `section:modules' on page 15 undefined on input line 7 94. LaTeX Warning: Reference `data:in' on page 15 undefined on input line 837. [15] [16] Chapter 4. [17] LaTeX Warning: Reference `section:functions' on page 18 undefined on input line 973. LaTeX Warning: Reference `section:distributions' on page 18 undefined on input line 973. Package natbib Warning: Citation `Neal94' on page 18 undefined on input line 99 3. 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Package natbib Warning: Citation `Gamerman97' on page 20 undefined on input lin e 1108. [20] Chapter 5. LaTeX Warning: Reference `table:base:functions' on page 21 undefined on input l ine 1165. LaTeX Warning: `h' float specifier changed to `ht'. LaTeX Warning: Reference `table:base:functions' on page 21 undefined on input l ine 1208. LaTeX Warning: Reference `table:base:functions' on page 21 undefined on input l ine 1213. [21] LaTeX Warning: Reference `table:bugs:scalar' on page 22 undefined on input line 1220. LaTeX Warning: Reference `table:bugs:link' on page 22 undefined on input line 1 225. LaTeX Warning: Reference `table:bugs:dpq' on page 22 undefined on input line 12 40. [22] LaTeX Warning: Reference `table:bugs:distributions:real' on page 23 undefined o n input line 1257. LaTeX Warning: Reference `table:bugs:distributions:discrete' on page 23 undefin ed on input line 1258. LaTeX Warning: Reference `table:bugs:scalar2' on page 23 undefined on input lin e 1356. LaTeX Warning: Reference `table:bugs:scalar2' on page 23 undefined on input lin e 1358. Overfull \hbox (93.3373pt too wide) in paragraph at lines 1367--1384 [][] LaTeX Warning: Reference `table:bugs:vector' on page 23 undefined on input line 1389. LaTeX Warning: Reference `table:bugs:functions:alias' on page 23 undefined on i nput line 1423. [23] [24] [25] [26] Chapter 6. LaTeX Warning: Reference `table:bugs:distributions:real' on page 27 undefined o n input line 1450. LaTeX Warning: Reference `table:bugs:distributions:discrete' on page 27 undefin ed on input line 1451. LaTeX Warning: Reference `table:bugs:distributions:multi' on page 27 undefined on input line 1452. Overfull \vbox (3.49539pt too high) detected at line 1477 Overfull \hbox (39.58235pt too wide) in paragraph at lines 1464--1547 [] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 1561. Overfull \hbox (59.04099pt too wide) in paragraph at lines 1553--1590 [] Overfull \vbox (1.6626pt too high) detected at line 1603 Overfull \hbox (25.05142pt too wide) in paragraph at lines 1597--1630 [] LaTeX Warning: Reference `table:bugs:distributions:alias' on page 27 undefined on input line 1641. [27] [28] [29] Chapter 7. [30] [31] [32] [33] LaTeX Warning: Reference `section:obfun' on page 34 undefined on input line 193 4. [34] [35] Chapter 8. [36] Chapter 9. [37] Appendix A. [38] No file jags_user_manual.bbl. Package natbib Warning: There were undefined citations. [39] (./jags_user_manual.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on jags_user_manual.pdf (40 pages, 316534 bytes). Transcript written on jags_user_manual.log. BIBINPUTS=".:$BIBINPUTS" bibtex jags_user_manual This is BibTeX, Version 0.99d (TeX Live 2012/Debian) The top-level auxiliary file: jags_user_manual.aux The style file: plain.bst Database file #1: jags_user_manual.bib Warning--I didn't find a database entry for "appendix:data" (There was 1 warning) TEXINPUTS=".:$TEXINPUTS" pdflatex jags_user_manual.tex This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/Debian) restricted \write18 enabled. entering extended mode (./jags_user_manual.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size11.clo)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/a4wide/a4wide.sty (/usr/share/texlive/texmf-dist/tex/latex/ntgclass/a4.sty)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) (./jags_user_manual.aux LaTeX Warning: Label `parameters:in' multiply defined. ) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] (./jags_user_manual.toc [1]) [2] Chapter 1. [3] Chapter 2. [4] Package natbib Warning: Citation `appendix:data' on page 5 undefined on input l ine 134. [5] [6] [7] Package natbib Warning: Citation `appendix:data' on page 8 undefined on input l ine 290. [8] [9] [10] [11] Chapter 3. Overfull \hbox (34.48734pt too wide) in paragraph at lines 554--554 []\OT1/cmtt/m/n/10.95 parameters in "line-inits1.R", chain(1) # Read initial va lues from file for chain 1[] Overfull \hbox (34.48734pt too wide) in paragraph at lines 554--554 []\OT1/cmtt/m/n/10.95 parameters in "line-inits2.R", chain(2) # Read initial va lues from file for chain 2[] Overfull \hbox (34.48734pt too wide) in paragraph at lines 554--554 []\OT1/cmtt/m/n/10.95 update 1000 # Adaptation (if necessary) and burnin for 1000 iterations[] [12] [13] Package natbib Warning: Citation `spiegelhalter:etal:2002' on page 14 undefined on input line 717. [14] Overfull \hbox (16.27263pt too wide) in paragraph at lines 731--737 \OT1/cmr/m/n/10.95 If the named node has a trace mon-i-tor, this dumps the mon- i-tored val-ues of to files \OT1/cmtt/m/n/10.95 CODAindex.txt\OT1/cmr/m/n/10.95 , (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [15] [16] [17] Chapter 4. [18] Package natbib Warning: Citation `Neal94' on page 19 undefined on input line 99 3. Package natbib Warning: Citation `Celeux99' on page 19 undefined on input line 993. [19] Package natbib Warning: Citation `spiegelhalter:etal:2002' on page 20 undefined on input line 1021. Package natbib Warning: Citation `plummer:2002' on page 20 undefined on input l ine 1023. Package natbib Warning: Citation `spiegelhalter:etal:2002' on page 20 undefined on input line 1039. Package natbib Warning: Citation `plummer:2008' on page 20 undefined on input l ine 1055. [20] Package natbib Warning: Citation `Davis2006' on page 21 undefined on input line 1095. Package natbib Warning: Citation `Davis1999' on page 21 undefined on input line 1095. Package natbib Warning: Citation `AlbertChib93' on page 21 undefined on input l ine 1101. Package natbib Warning: Citation `HolmesHeld06' on page 21 undefined on input l ine 1104. Package natbib Warning: Citation `Fruhwirth-Schnatter09' on page 21 undefined o n input line 1106. Package natbib Warning: Citation `Gamerman97' on page 21 undefined on input lin e 1108. [21] Chapter 5. LaTeX Warning: `h' float specifier changed to `ht'. [22] [23] Overfull \hbox (93.3373pt too wide) in paragraph at lines 1367--1384 [][] [24] [25] [26] [27] Chapter 6. Overfull \vbox (3.49539pt too high) detected at line 1477 Overfull \hbox (39.58235pt too wide) in paragraph at lines 1464--1547 [] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 1561. Overfull \hbox (59.04099pt too wide) in paragraph at lines 1553--1590 [] Overfull \vbox (1.6626pt too high) detected at line 1603 Overfull \hbox (25.05142pt too wide) in paragraph at lines 1597--1630 [] [28] [29] [30] Chapter 7. [31] [32] [33] [34] [35] [36] Chapter 8. [37] Chapter 9. [38] Appendix A. [39] (./jags_user_manual.bbl [40]) Package natbib Warning: There were undefined citations. [41] (./jags_user_manual.aux Package natbib Warning: Citation(s) may have changed. (natbib) Rerun to get citations correct. ) LaTeX Warning: There were multiply-defined labels. ) (see the transcript file for additional information) Output written on jags_user_manual.pdf (42 pages, 326046 bytes). Transcript written on jags_user_manual.log. TEXINPUTS=".:$TEXINPUTS" pdflatex jags_user_manual.tex This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/Debian) restricted \write18 enabled. entering extended mode (./jags_user_manual.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size11.clo)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/a4wide/a4wide.sty (/usr/share/texlive/texmf-dist/tex/latex/ntgclass/a4.sty)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) (./jags_user_manual.aux LaTeX Warning: Label `parameters:in' multiply defined. ) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] (./jags_user_manual.toc [1]) [2] Chapter 1. [3] Chapter 2. [4] Package natbib Warning: Citation `appendix:data' on page 5 undefined on input l ine 134. [5] [6] [7] Package natbib Warning: Citation `appendix:data' on page 8 undefined on input l ine 290. [8] [9] [10] [11] Chapter 3. Overfull \hbox (34.48734pt too wide) in paragraph at lines 554--554 []\OT1/cmtt/m/n/10.95 parameters in "line-inits1.R", chain(1) # Read initial va lues from file for chain 1[] Overfull \hbox (34.48734pt too wide) in paragraph at lines 554--554 []\OT1/cmtt/m/n/10.95 parameters in "line-inits2.R", chain(2) # Read initial va lues from file for chain 2[] Overfull \hbox (34.48734pt too wide) in paragraph at lines 554--554 []\OT1/cmtt/m/n/10.95 update 1000 # Adaptation (if necessary) and burnin for 1000 iterations[] [12] [13] [14] Overfull \hbox (16.27263pt too wide) in paragraph at lines 731--737 \OT1/cmr/m/n/10.95 If the named node has a trace mon-i-tor, this dumps the mon- i-tored val-ues of to files \OT1/cmtt/m/n/10.95 CODAindex.txt\OT1/cmr/m/n/10.95 , (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [15] [16] [17] Chapter 4. [18] [19] [20] [21] Chapter 5. LaTeX Warning: `h' float specifier changed to `ht'. [22] [23] Overfull \hbox (93.3373pt too wide) in paragraph at lines 1367--1384 [][] [24] [25] [26] [27] Chapter 6. Overfull \vbox (3.49539pt too high) detected at line 1477 Overfull \hbox (39.58235pt too wide) in paragraph at lines 1464--1547 [] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 1561. Overfull \hbox (59.04099pt too wide) in paragraph at lines 1553--1590 [] Overfull \vbox (1.6626pt too high) detected at line 1603 Overfull \hbox (25.05142pt too wide) in paragraph at lines 1597--1630 [] [28] [29] [30] Chapter 7. [31] [32] [33] [34] [35] [36] Chapter 8. [37] Chapter 9. [38] Appendix A. [39] (./jags_user_manual.bbl [40]) Package natbib Warning: There were undefined citations. [41] (./jags_user_manual.aux) LaTeX Warning: There were multiply-defined labels. ) (see the transcript file for additional information) Output written on jags_user_manual.pdf (42 pages, 325682 bytes). Transcript written on jags_user_manual.log. TEXINPUTS=".:$TEXINPUTS" pdflatex jags_installation_manual.tex This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/Debian) restricted \write18 enabled. entering extended mode (./jags_installation_manual.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size11.clo)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/a4wide/a4wide.sty (/usr/share/texlive/texmf-dist/tex/latex/ntgclass/a4.sty)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) No file jags_installation_manual.aux. (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [1] Overfull \hbox (21.19487pt too wide) in paragraph at lines 123--125 []\OT1/cmr/m/n/10.95 You may use al-ter-na-tive BLAS and LA-PACK li-braries us- ing the con-fig-ure op-tions \OT1/cmtt/m/n/10.95 --with-blas LaTeX Warning: Characters dropped after `\end{verbatim}' on input line 141. [2] LaTeX Warning: Reference `section:blas:lapack' on page 3 undefined on input lin e 207. Overfull \hbox (7.51256pt too wide) in paragraph at lines 211--215 \OT1/cmr/m/n/10.95 Runtime link-ing to the cor-rect li-braries is en-sured by t he au-to-matic ad-di-tion of \OT1/cmtt/m/n/10.95 /usr/lib/atlas LaTeX Warning: Reference `section:blas:lapack' on page 3 undefined on input lin e 224. [3] LaTeX Warning: Reference `section:blas:multithreaded' on page 4 undefined on in put line 236. LaTeX Warning: Reference `section:blas:multithreaded' on page 4 undefined on in put line 292. [4] [5] [6] [7] [8] [9] Overfull \hbox (0.14856pt too wide) in paragraph at lines 597--599 []\OT1/cmr/m/n/10.95 Repeat the same steps for the LA-PACK li-brary, cre-at-ing an im-port li-brary (`\OT1/cmss/m/n/10.95 liblapack.dll.a\OT1/cmr/m/n/10.95 ') [10] Overfull \hbox (5.87102pt too wide) in paragraph at lines 618--622 \OT1/cmr/m/n/10.95 where `\OT1/cmss/m/n/10.95 /path/to/import/libs\OT1/cmr/m/n/ 10.95 ' is a di-rec-tory that con-tains the 32-bit im-port li-braries (`\OT1/cm ss/m/n/10.95 libblas.dll.a\OT1/cmr/m/n/10.95 ' [11] (./jags_installation_manual.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on jags_installation_manual.pdf (12 pages, 167234 bytes). Transcript written on jags_installation_manual.log. TEXINPUTS=".:$TEXINPUTS" pdflatex jags_installation_manual.tex This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/Debian) restricted \write18 enabled. entering extended mode (./jags_installation_manual.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size11.clo)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/a4wide/a4wide.sty (/usr/share/texlive/texmf-dist/tex/latex/ntgclass/a4.sty)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (./jags_installation_manual.aux) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] (/usr/share/texlive/texmf-dist/tex/latex/base/omscmr.fd) [1] Overfull \hbox (21.19487pt too wide) in paragraph at lines 123--125 []\OT1/cmr/m/n/10.95 You may use al-ter-na-tive BLAS and LA-PACK li-braries us- ing the con-fig-ure op-tions \OT1/cmtt/m/n/10.95 --with-blas LaTeX Warning: Characters dropped after `\end{verbatim}' on input line 141. [2] Overfull \hbox (7.51256pt too wide) in paragraph at lines 211--215 \OT1/cmr/m/n/10.95 Runtime link-ing to the cor-rect li-braries is en-sured by t he au-to-matic ad-di-tion of \OT1/cmtt/m/n/10.95 /usr/lib/atlas [3] [4] [5] [6] [7] [8] [9] Overfull \hbox (0.14856pt too wide) in paragraph at lines 597--599 []\OT1/cmr/m/n/10.95 Repeat the same steps for the LA-PACK li-brary, cre-at-ing an im-port li-brary (`\OT1/cmss/m/n/10.95 liblapack.dll.a\OT1/cmr/m/n/10.95 ') [10] Overfull \hbox (5.87102pt too wide) in paragraph at lines 618--622 \OT1/cmr/m/n/10.95 where `\OT1/cmss/m/n/10.95 /path/to/import/libs\OT1/cmr/m/n/ 10.95 ' is a di-rec-tory that con-tains the 32-bit im-port li-braries (`\OT1/cm ss/m/n/10.95 libblas.dll.a\OT1/cmr/m/n/10.95 ' [11] (./jags_installation_manual.aux) ) (see the transcript file for additional information) Output written on jags_installation_manual.pdf (12 pages, 166994 bytes). Transcript written on jags_installation_manual.log. TEXINPUTS=".:$TEXINPUTS" pdflatex jags_developer_manual.tex This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/Debian) restricted \write18 enabled. entering extended mode (./jags_developer_manual.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size11.clo)) (/usr/share/texlive/texmf-dist/tex/latex/a4wide/a4wide.sty (/usr/share/texlive/texmf-dist/tex/latex/ntgclass/a4.sty)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) No file jags_developer_manual.aux. (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] No file jags_developer_manual.toc. [1] Chapter 1. [2] Chapter 2. [3] Chapter 3. [4] Chapter 4. [5] Chapter 5. [6] [7] (./jags_developer_manual.aux) LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) Output written on jags_developer_manual.pdf (8 pages, 140695 bytes). Transcript written on jags_developer_manual.log. TEXINPUTS=".:$TEXINPUTS" pdflatex jags_developer_manual.tex This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/Debian) restricted \write18 enabled. entering extended mode (./jags_developer_manual.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2007/10/19 v1.4h Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size11.clo)) (/usr/share/texlive/texmf-dist/tex/latex/a4wide/a4wide.sty (/usr/share/texlive/texmf-dist/tex/latex/ntgclass/a4.sty)) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) (./jags_developer_manual.aux) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] (./jags_developer_manual.toc) [1] Chapter 1. [2] Chapter 2. [3] Chapter 3. [4] Chapter 4. [5] Chapter 5. [6] [7] (./jags_developer_manual.aux) ) Output written on jags_developer_manual.pdf (8 pages, 144852 bytes). Transcript written on jags_developer_manual.log. make[2]: Leaving directory `/build/buildd/jags-3.3.0/doc/manual' Makefile Makefile.am Makefile.in jags_developer_manual.aux jags_developer_manual.log jags_developer_manual.pdf jags_developer_manual.tex jags_developer_manual.toc jags_installation_manual.aux jags_installation_manual.log jags_installation_manual.pdf jags_installation_manual.tex jags_user_manual.aux jags_user_manual.bbl jags_user_manual.bib jags_user_manual.blg jags_user_manual.log jags_user_manual.pdf jags_user_manual.tex jags_user_manual.toc make[1]: Leaving directory `/build/buildd/jags-3.3.0' dh_auto_test -a make[1]: Entering directory `/build/buildd/jags-3.3.0' Making check in m4 make[2]: Entering directory `/build/buildd/jags-3.3.0/m4' make[2]: Nothing to be done for `check'. make[2]: Leaving directory `/build/buildd/jags-3.3.0/m4' Making check in libltdl make[2]: Entering directory `/build/buildd/jags-3.3.0/libltdl' make check-am make[3]: Entering directory 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done for `check-am'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/msm' make[4]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/msm' Making check in mix make[4]: Entering directory `/build/buildd/jags-3.3.0/src/modules/mix' Making check in distributions make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/mix/distributions' make[5]: Nothing to be done for `check'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/mix/distributions' Making check in samplers make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/mix/samplers' make[5]: Nothing to be done for `check'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/mix/samplers' make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/mix' make[5]: Nothing to be done for `check-am'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/mix' make[4]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/mix' Making check in lecuyer make[4]: Entering directory `/build/buildd/jags-3.3.0/src/modules/lecuyer' make[4]: Nothing to be done for `check'. make[4]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/lecuyer' Making check in glm make[4]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm' Making check in CSparse make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/CSparse' make[5]: Nothing to be done for `check'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/CSparse' Making check in SSparse make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse' Making check in UFconfig make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/UFconfig' make[6]: Nothing to be done for `check'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/UFconfig' Making check in AMD make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/AMD' make[6]: Nothing to be done for `check'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/AMD' Making check in COLAMD make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/COLAMD' make[6]: Nothing to be done for `check'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/COLAMD' Making check in CHOLMOD make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD' Making check in Check make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Check' make[7]: Nothing to be done for `check'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Check' Making check in Cholesky make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' make[7]: Nothing to be done for `check'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' Making check in Core make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Core' make[7]: Nothing to be done for `check'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Core' Making check in Include make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Include' make[7]: Nothing to be done for `check'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Include' Making check in MatrixOps make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps' make[7]: Nothing to be done for `check'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps' Making check in Modify make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Modify' make[7]: Nothing to be done for `check'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Modify' Making check in Supernodal make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Supernodal' make[7]: Nothing to be done for `check'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Supernodal' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD' make[7]: Nothing to be done for `check-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse' make[6]: Nothing to be done for `check-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse' Making check in samplers make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/samplers' make[5]: Nothing to be done for `check'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/samplers' make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm' make[5]: Nothing to be done for `check-am'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm' make[4]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm' Making check in dic make[4]: Entering directory `/build/buildd/jags-3.3.0/src/modules/dic' make[4]: Nothing to be done for `check'. make[4]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/dic' make[4]: Entering directory `/build/buildd/jags-3.3.0/src/modules' make[4]: Nothing to be done for `check-am'. make[4]: Leaving directory `/build/buildd/jags-3.3.0/src/modules' make[3]: Leaving directory `/build/buildd/jags-3.3.0/src/modules' Making check in terminal make[3]: Entering directory `/build/buildd/jags-3.3.0/src/terminal' make check-am make[4]: Entering directory `/build/buildd/jags-3.3.0/src/terminal' make[4]: Nothing to be done for `check-am'. make[4]: Leaving directory `/build/buildd/jags-3.3.0/src/terminal' make[3]: Leaving directory `/build/buildd/jags-3.3.0/src/terminal' make[3]: Entering directory `/build/buildd/jags-3.3.0/src' make[3]: Nothing to be done for `check-am'. make[3]: Leaving directory `/build/buildd/jags-3.3.0/src' make[2]: Leaving directory `/build/buildd/jags-3.3.0/src' Making check in etc make[2]: Entering directory `/build/buildd/jags-3.3.0/etc' make[2]: Nothing to be done for `check'. make[2]: Leaving directory `/build/buildd/jags-3.3.0/etc' Making check in win make[2]: Entering directory `/build/buildd/jags-3.3.0/win' Making check in runtime32 make[3]: Entering directory `/build/buildd/jags-3.3.0/win/runtime32' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/build/buildd/jags-3.3.0/win/runtime32' Making check in runtime64 make[3]: Entering directory `/build/buildd/jags-3.3.0/win/runtime64' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/build/buildd/jags-3.3.0/win/runtime64' make[3]: Entering directory `/build/buildd/jags-3.3.0/win' make[3]: Nothing to be done for `check-am'. make[3]: Leaving directory `/build/buildd/jags-3.3.0/win' make[2]: Leaving directory `/build/buildd/jags-3.3.0/win' Making check in doc make[2]: Entering directory `/build/buildd/jags-3.3.0/doc' Making check in manual make[3]: Entering directory `/build/buildd/jags-3.3.0/doc/manual' make[3]: Nothing to be done for `check'. make[3]: Leaving directory `/build/buildd/jags-3.3.0/doc/manual' make[3]: Entering directory `/build/buildd/jags-3.3.0/doc' make[3]: Nothing to be done for `check-am'. make[3]: Leaving directory `/build/buildd/jags-3.3.0/doc' make[2]: Leaving directory `/build/buildd/jags-3.3.0/doc' make[2]: Entering directory `/build/buildd/jags-3.3.0' make[2]: Leaving directory `/build/buildd/jags-3.3.0' make[1]: Leaving directory `/build/buildd/jags-3.3.0' /usr/bin/fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_installdirs -a debian/rules override_dh_auto_install make[1]: Entering directory `/build/buildd/jags-3.3.0' dh_auto_install make[2]: Entering directory `/build/buildd/jags-3.3.0' Making install in m4 make[3]: Entering directory `/build/buildd/jags-3.3.0/m4' make[4]: Entering directory `/build/buildd/jags-3.3.0/m4' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/build/buildd/jags-3.3.0/m4' make[3]: Leaving directory `/build/buildd/jags-3.3.0/m4' Making install in libltdl make[3]: Entering directory `/build/buildd/jags-3.3.0/libltdl' make install-am make[4]: Entering directory `/build/buildd/jags-3.3.0/libltdl' make[5]: Entering directory `/build/buildd/jags-3.3.0/libltdl' make[5]: Leaving directory `/build/buildd/jags-3.3.0/libltdl' make[4]: Leaving directory `/build/buildd/jags-3.3.0/libltdl' make[3]: Leaving directory `/build/buildd/jags-3.3.0/libltdl' Making install in src make[3]: Entering directory `/build/buildd/jags-3.3.0/src' Making install in include make[4]: Entering directory `/build/buildd/jags-3.3.0/src/include' Making install in compiler make[5]: Entering directory `/build/buildd/jags-3.3.0/src/include/compiler' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/include/compiler' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/compiler' /usr/bin/install -c -m 644 Compiler.h LogicalFactory.h ParseTree.h Counter.h CounterTab.h ConstantFactory.h MixtureFactory.h NodeFactory.h ObsFuncTab.h '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/compiler' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/include/compiler' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/include/compiler' Making install in distribution make[5]: Entering directory `/build/buildd/jags-3.3.0/src/include/distribution' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/include/distribution' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/distribution' /usr/bin/install -c -m 644 Distribution.h ScalarDist.h VectorDist.h ArrayDist.h DistPtr.h DistTab.h DistError.h '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/distribution' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/include/distribution' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/include/distribution' Making install in function make[5]: Entering directory `/build/buildd/jags-3.3.0/src/include/function' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/include/function' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/function' /usr/bin/install -c -m 644 FuncTab.h Function.h ScalarFunction.h VectorFunction.h ArrayFunction.h LinkFunction.h FunctionPtr.h FuncError.h '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/function' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/include/function' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/include/function' Making install in graph make[5]: Entering directory `/build/buildd/jags-3.3.0/src/include/graph' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/include/graph' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/graph' /usr/bin/install -c -m 644 AggNode.h MixtureNode.h Node.h ConstantNode.h LogicalNode.h StochasticNode.h Graph.h DeterministicNode.h GraphMarks.h NodeError.h ScalarLogicalNode.h VectorLogicalNode.h ArrayLogicalNode.h LinkNode.h VSLogicalNode.h ScalarStochasticNode.h VectorStochasticNode.h ArrayStochasticNode.h '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/graph' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/include/graph' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/include/graph' Making install in model make[5]: Entering directory `/build/buildd/jags-3.3.0/src/include/model' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/include/model' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/model' /usr/bin/install -c -m 644 SymTab.h NodeArray.h Model.h Monitor.h BUGSModel.h MonitorFactory.h MonitorControl.h MonitorInfo.h '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/model' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/include/model' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/include/model' Making install in sampler make[5]: Entering directory `/build/buildd/jags-3.3.0/src/include/sampler' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/include/sampler' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/sampler' /usr/bin/install -c -m 644 Sampler.h SamplerFactory.h SingletonFactory.h Slicer.h Metropolis.h RWMetropolis.h ParallelSampler.h SampleMethod.h Linear.h GraphView.h StepAdapter.h TemperedMetropolis.h '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/sampler' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/include/sampler' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/include/sampler' Making install in sarray make[5]: Entering directory `/build/buildd/jags-3.3.0/src/include/sarray' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/include/sarray' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/sarray' /usr/bin/install -c -m 644 RangeIterator.h SArray.h Range.h '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/sarray' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/include/sarray' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/include/sarray' Making install in rng make[5]: Entering directory `/build/buildd/jags-3.3.0/src/include/rng' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/include/rng' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/rng' /usr/bin/install -c -m 644 RNG.h RmathRNG.h RNGFactory.h TruncatedNormal.h '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/rng' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/include/rng' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/include/rng' Making install in util make[5]: Entering directory `/build/buildd/jags-3.3.0/src/include/util' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/include/util' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/util' /usr/bin/install -c -m 644 nainf.h dim.h logical.h integer.h '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/util' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/include/util' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/include/util' Making install in module make[5]: Entering directory `/build/buildd/jags-3.3.0/src/include/module' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/include/module' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/module' /usr/bin/install -c -m 644 ModuleError.h '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS/module' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/include/module' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/include/module' make[5]: Entering directory `/build/buildd/jags-3.3.0/src/include' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/include' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS' /usr/bin/install -c -m 644 Console.h Module.h JRmath.h version.h '/build/buildd/jags-3.3.0/debian/jags/usr/include/JAGS' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/include' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/include' make[4]: Leaving directory `/build/buildd/jags-3.3.0/src/include' Making install in lib make[4]: Entering directory `/build/buildd/jags-3.3.0/src/lib' Making install in util make[5]: Entering directory `/build/buildd/jags-3.3.0/src/lib/util' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/lib/util' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/util' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/util' Making install in sarray make[5]: Entering directory `/build/buildd/jags-3.3.0/src/lib/sarray' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/lib/sarray' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/sarray' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/sarray' Making install in distribution make[5]: Entering directory `/build/buildd/jags-3.3.0/src/lib/distribution' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/lib/distribution' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/distribution' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/distribution' Making install in function make[5]: Entering directory `/build/buildd/jags-3.3.0/src/lib/function' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/lib/function' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/function' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/function' Making install in sampler make[5]: Entering directory `/build/buildd/jags-3.3.0/src/lib/sampler' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/lib/sampler' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/sampler' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/sampler' Making install in graph make[5]: Entering directory `/build/buildd/jags-3.3.0/src/lib/graph' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/lib/graph' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/graph' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/graph' Making install in model make[5]: Entering directory `/build/buildd/jags-3.3.0/src/lib/model' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/lib/model' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/model' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/model' Making install in compiler make[5]: Entering directory `/build/buildd/jags-3.3.0/src/lib/compiler' make install-am make[6]: Entering directory `/build/buildd/jags-3.3.0/src/lib/compiler' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/lib/compiler' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/compiler' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/compiler' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/compiler' Making install in rng make[5]: Entering directory `/build/buildd/jags-3.3.0/src/lib/rng' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/lib/rng' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/rng' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/rng' Making install in module make[5]: Entering directory `/build/buildd/jags-3.3.0/src/lib/module' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/lib/module' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/module' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/lib/module' make[5]: Entering directory `/build/buildd/jags-3.3.0/src/lib' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/lib' /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libjags.la '/build/buildd/jags-3.3.0/debian/jags/usr/lib' libtool: install: /usr/bin/install -c .libs/libjags.so.3.0.3 /build/buildd/jags-3.3.0/debian/jags/usr/lib/libjags.so.3.0.3 libtool: install: (cd /build/buildd/jags-3.3.0/debian/jags/usr/lib && { ln -s -f libjags.so.3.0.3 libjags.so.3 || { rm -f libjags.so.3 && ln -s libjags.so.3.0.3 libjags.so.3; }; }) libtool: install: (cd /build/buildd/jags-3.3.0/debian/jags/usr/lib && { ln -s -f libjags.so.3.0.3 libjags.so || { rm -f libjags.so && ln -s libjags.so.3.0.3 libjags.so; }; }) libtool: install: /usr/bin/install -c .libs/libjags.lai /build/buildd/jags-3.3.0/debian/jags/usr/lib/libjags.la libtool: install: warning: remember to run `libtool --finish /usr/lib' make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/lib' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/lib' make[4]: Leaving directory `/build/buildd/jags-3.3.0/src/lib' Making install in jrmath make[4]: Entering directory `/build/buildd/jags-3.3.0/src/jrmath' make[5]: Entering directory `/build/buildd/jags-3.3.0/src/jrmath' /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/lib' /bin/bash ../../libtool --mode=install /usr/bin/install -c libjrmath.la '/build/buildd/jags-3.3.0/debian/jags/usr/lib' libtool: install: /usr/bin/install -c .libs/libjrmath.so.0.0.0 /build/buildd/jags-3.3.0/debian/jags/usr/lib/libjrmath.so.0.0.0 libtool: install: (cd /build/buildd/jags-3.3.0/debian/jags/usr/lib && { ln -s -f libjrmath.so.0.0.0 libjrmath.so.0 || { rm -f libjrmath.so.0 && ln -s libjrmath.so.0.0.0 libjrmath.so.0; }; }) libtool: install: (cd /build/buildd/jags-3.3.0/debian/jags/usr/lib && { ln -s -f libjrmath.so.0.0.0 libjrmath.so || { rm -f libjrmath.so && ln -s libjrmath.so.0.0.0 libjrmath.so; }; }) libtool: install: /usr/bin/install -c .libs/libjrmath.lai /build/buildd/jags-3.3.0/debian/jags/usr/lib/libjrmath.la libtool: install: warning: remember to run `libtool --finish /usr/lib' make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/jrmath' make[4]: Leaving directory `/build/buildd/jags-3.3.0/src/jrmath' Making install in modules make[4]: Entering directory `/build/buildd/jags-3.3.0/src/modules' Making install in base make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/base' Making install in functions make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/base/functions' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/base/functions' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/base/functions' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/base/functions' Making install in samplers make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/base/samplers' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/base/samplers' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/base/samplers' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/base/samplers' Making install in monitors make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/base/monitors' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/base/monitors' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/base/monitors' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/base/monitors' Making install in rngs make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/base/rngs' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/base/rngs' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/base/rngs' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/base/rngs' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/base' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/base' make[7]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' /bin/bash ../../../libtool --mode=install /usr/bin/install -c basemod.la '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' libtool: install: warning: relinking `basemod.la' libtool: install: (cd /build/buildd/jags-3.3.0/src/modules/base; /bin/bash /build/buildd/jags-3.3.0/libtool --tag CXX --mode=relink g++ -g -O2 -module -avoid-version -o basemod.la -rpath /usr/lib/JAGS/modules-3 basemod_la-base.lo functions/basefunctions.la monitors/basemonitors.la samplers/basesamplers.la rngs/baserngs.la ../../../src/jrmath/libjrmath.la ../../../src/lib/libjags.la -lm -ldl -inst-prefix-dir /build/buildd/jags-3.3.0/debian/jags) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbeginS.o .libs/basemod_la-base.o -Wl,--whole-archive functions/.libs/basefunctions.a monitors/.libs/basemonitors.a samplers/.libs/basesamplers.a rngs/.libs/baserngs.a -Wl,--no-whole-archive -L/build/buildd/jags-3.3.0/debian/jags/usr/lib -L/usr/lib -ljrmath -ljags -ldl -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/4.7/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-soname -Wl,basemod.so -o .libs/basemod.so libtool: install: /usr/bin/install -c .libs/basemod.soT /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/basemod.so libtool: install: /usr/bin/install -c .libs/basemod.lai /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/basemod.la libtool: install: warning: remember to run `libtool --finish /usr/lib/JAGS/modules-3' make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/base' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/base' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/base' Making install in bugs make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/bugs' Making install in distributions make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/bugs/distributions' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/bugs/distributions' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/bugs/distributions' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/bugs/distributions' Making install in functions make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/bugs/functions' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/bugs/functions' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/bugs/functions' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/bugs/functions' Making install in samplers make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/bugs/samplers' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/bugs/samplers' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/bugs/samplers' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/bugs/samplers' Making install in matrix make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/bugs/matrix' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/bugs/matrix' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/bugs/matrix' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/bugs/matrix' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/bugs' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/bugs' make[7]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' /bin/bash ../../../libtool --mode=install /usr/bin/install -c bugs.la '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' libtool: install: warning: relinking `bugs.la' libtool: install: (cd /build/buildd/jags-3.3.0/src/modules/bugs; /bin/bash /build/buildd/jags-3.3.0/libtool --tag CXX --mode=relink g++ -g -O2 -module -avoid-version -o bugs.la -rpath /usr/lib/JAGS/modules-3 bugs_la-bugs.lo distributions/bugsdist.la functions/bugsfunc.la samplers/bugssampler.la matrix/bugsmatrix.la ../../../src/jrmath/libjrmath.la ../../../src/lib/libjags.la -llapack -lblas -lm -ldl -inst-prefix-dir /build/buildd/jags-3.3.0/debian/jags) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbeginS.o .libs/bugs_la-bugs.o -Wl,--whole-archive distributions/.libs/bugsdist.a functions/.libs/bugsfunc.a samplers/.libs/bugssampler.a matrix/.libs/bugsmatrix.a -Wl,--no-whole-archive -L/build/buildd/jags-3.3.0/debian/jags/usr/lib -L/usr/lib -ljrmath -ljags -llapack -lblas -ldl -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/4.7/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-soname -Wl,bugs.so -o .libs/bugs.so libtool: install: /usr/bin/install -c .libs/bugs.soT /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/bugs.so libtool: install: /usr/bin/install -c .libs/bugs.lai /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/bugs.la libtool: install: warning: remember to run `libtool --finish /usr/lib/JAGS/modules-3' make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/bugs' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/bugs' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/bugs' Making install in msm make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/msm' Making install in distributions make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/msm/distributions' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/msm/distributions' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/msm/distributions' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/msm/distributions' Making install in functions make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/msm/functions' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/msm/functions' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/msm/functions' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/msm/functions' Making install in matrix make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/msm/matrix' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/msm/matrix' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/msm/matrix' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/msm/matrix' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/msm' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/msm' make[7]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' /bin/bash ../../../libtool --mode=install /usr/bin/install -c msm.la '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' libtool: install: warning: relinking `msm.la' libtool: install: (cd /build/buildd/jags-3.3.0/src/modules/msm; /bin/bash /build/buildd/jags-3.3.0/libtool --tag CXX --mode=relink g++ -g -O2 -module -avoid-version -o msm.la -rpath /usr/lib/JAGS/modules-3 msm_la-msm.lo distributions/msmdist.la functions/msmfunc.la matrix/msmmatrix.la ../../../src/jrmath/libjrmath.la ../../../src/lib/libjags.la -llapack -lblas -lm -ldl -inst-prefix-dir /build/buildd/jags-3.3.0/debian/jags) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbeginS.o .libs/msm_la-msm.o -Wl,--whole-archive distributions/.libs/msmdist.a functions/.libs/msmfunc.a matrix/.libs/msmmatrix.a -Wl,--no-whole-archive -L/build/buildd/jags-3.3.0/debian/jags/usr/lib -L/usr/lib -ljrmath -ljags -llapack -lblas -ldl -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/4.7/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-soname -Wl,msm.so -o .libs/msm.so libtool: install: /usr/bin/install -c .libs/msm.soT /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/msm.so libtool: install: /usr/bin/install -c .libs/msm.lai /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/msm.la libtool: install: warning: remember to run `libtool --finish /usr/lib/JAGS/modules-3' make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/msm' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/msm' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/msm' Making install in mix make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/mix' Making install in distributions make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/mix/distributions' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/mix/distributions' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/mix/distributions' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/mix/distributions' Making install in samplers make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/mix/samplers' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/mix/samplers' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/mix/samplers' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/mix/samplers' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/mix' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/mix' make[7]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' /bin/bash ../../../libtool --mode=install /usr/bin/install -c mix.la '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' libtool: install: warning: relinking `mix.la' libtool: install: (cd /build/buildd/jags-3.3.0/src/modules/mix; /bin/bash /build/buildd/jags-3.3.0/libtool --tag CXX --mode=relink g++ -g -O2 -module -avoid-version -o mix.la -rpath /usr/lib/JAGS/modules-3 mix_la-mix.lo distributions/mixdist.la samplers/mixsamp.la ../../../src/jrmath/libjrmath.la ../../../src/lib/libjags.la -lm -ldl -inst-prefix-dir /build/buildd/jags-3.3.0/debian/jags) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbeginS.o .libs/mix_la-mix.o -Wl,--whole-archive distributions/.libs/mixdist.a samplers/.libs/mixsamp.a -Wl,--no-whole-archive -L/build/buildd/jags-3.3.0/debian/jags/usr/lib -L/usr/lib -ljrmath -ljags -ldl -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/4.7/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-soname -Wl,mix.so -o .libs/mix.so libtool: install: /usr/bin/install -c .libs/mix.soT /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/mix.so libtool: install: /usr/bin/install -c .libs/mix.lai /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/mix.la libtool: install: warning: remember to run `libtool --finish /usr/lib/JAGS/modules-3' make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/mix' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/mix' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/mix' Making install in lecuyer make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/lecuyer' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/lecuyer' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' /bin/bash ../../../libtool --mode=install /usr/bin/install -c lecuyer.la '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' libtool: install: warning: relinking `lecuyer.la' libtool: install: (cd /build/buildd/jags-3.3.0/src/modules/lecuyer; /bin/bash /build/buildd/jags-3.3.0/libtool --tag CXX --mode=relink g++ -g -O2 -module -avoid-version -o lecuyer.la -rpath /usr/lib/JAGS/modules-3 lecuyer_la-lecuyer.lo lecuyer_la-RngStream.lo lecuyer_la-RngStreamFactory.lo ../../../src/lib/libjags.la -lm -ldl -inst-prefix-dir /build/buildd/jags-3.3.0/debian/jags) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbeginS.o .libs/lecuyer_la-lecuyer.o .libs/lecuyer_la-RngStream.o .libs/lecuyer_la-RngStreamFactory.o -L/build/buildd/jags-3.3.0/debian/jags/usr/lib -L/usr/lib -ljags -ldl -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/4.7/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-soname -Wl,lecuyer.so -o .libs/lecuyer.so libtool: install: /usr/bin/install -c .libs/lecuyer.soT /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/lecuyer.so libtool: install: /usr/bin/install -c .libs/lecuyer.lai /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/lecuyer.la libtool: install: warning: remember to run `libtool --finish /usr/lib/JAGS/modules-3' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/lecuyer' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/lecuyer' Making install in glm make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm' Making install in CSparse make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/CSparse' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/CSparse' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/CSparse' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/CSparse' Making install in SSparse make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse' Making install in UFconfig make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/UFconfig' make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/UFconfig' make[8]: Nothing to be done for `install-exec-am'. make[8]: Nothing to be done for `install-data-am'. make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/UFconfig' make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/UFconfig' Making install in AMD make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/AMD' make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/AMD' make[8]: Nothing to be done for `install-exec-am'. make[8]: Nothing to be done for `install-data-am'. make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/AMD' make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/AMD' Making install in COLAMD make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/COLAMD' make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/COLAMD' make[8]: Nothing to be done for `install-exec-am'. make[8]: Nothing to be done for `install-data-am'. make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/COLAMD' make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/COLAMD' Making install in CHOLMOD make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD' Making install in Check make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Check' make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Check' make[9]: Nothing to be done for `install-exec-am'. make[9]: Nothing to be done for `install-data-am'. make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Check' make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Check' Making install in Cholesky make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' make[9]: Nothing to be done for `install-exec-am'. make[9]: Nothing to be done for `install-data-am'. make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Cholesky' Making install in Core make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Core' make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Core' make[9]: Nothing to be done for `install-exec-am'. make[9]: Nothing to be done for `install-data-am'. make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Core' make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Core' Making install in Include make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Include' make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Include' make[9]: Nothing to be done for `install-exec-am'. make[9]: Nothing to be done for `install-data-am'. make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Include' make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Include' Making install in MatrixOps make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps' make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps' make[9]: Nothing to be done for `install-exec-am'. make[9]: Nothing to be done for `install-data-am'. make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps' make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/MatrixOps' Making install in Modify make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Modify' make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Modify' make[9]: Nothing to be done for `install-exec-am'. make[9]: Nothing to be done for `install-data-am'. make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Modify' make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Modify' Making install in Supernodal make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Supernodal' make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Supernodal' make[9]: Nothing to be done for `install-exec-am'. make[9]: Nothing to be done for `install-data-am'. make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Supernodal' make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD/Supernodal' make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD' make[9]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD' make[9]: Nothing to be done for `install-exec-am'. make[9]: Nothing to be done for `install-data-am'. make[9]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD' make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD' make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse/CHOLMOD' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse' make[8]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse' make[8]: Nothing to be done for `install-exec-am'. make[8]: Nothing to be done for `install-data-am'. make[8]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse' make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/SSparse' Making install in samplers make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/samplers' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm/samplers' make[7]: Nothing to be done for `install-exec-am'. make[7]: Nothing to be done for `install-data-am'. make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/samplers' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm/samplers' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm' make[7]: Entering directory `/build/buildd/jags-3.3.0/src/modules/glm' make[7]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' /bin/bash ../../../libtool --mode=install /usr/bin/install -c glm.la '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' libtool: install: warning: relinking `glm.la' libtool: install: (cd /build/buildd/jags-3.3.0/src/modules/glm; /bin/bash /build/buildd/jags-3.3.0/libtool --tag CXX --mode=relink g++ -g -O2 -module -avoid-version -o glm.la -rpath /usr/lib/JAGS/modules-3 glm_la-glm.lo samplers/glmsampler.la CSparse/csparse.la SSparse/ssparse.la ../../../src/lib/libjags.la ../../../src/jrmath/libjrmath.la -llapack -lblas -lm -ldl -inst-prefix-dir /build/buildd/jags-3.3.0/debian/jags) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbeginS.o .libs/glm_la-glm.o -Wl,--whole-archive samplers/.libs/glmsampler.a CSparse/.libs/csparse.a SSparse/.libs/ssparse.a -Wl,--no-whole-archive -L/build/buildd/jags-3.3.0/debian/jags/usr/lib -L/usr/lib -ljags -ljrmath -llapack -lblas -ldl -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/4.7/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-soname -Wl,glm.so -o .libs/glm.so libtool: install: /usr/bin/install -c .libs/glm.soT /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/glm.so libtool: install: /usr/bin/install -c .libs/glm.lai /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/glm.la libtool: install: warning: remember to run `libtool --finish /usr/lib/JAGS/modules-3' make[7]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/glm' Making install in dic make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules/dic' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules/dic' make[6]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' /bin/bash ../../../libtool --mode=install /usr/bin/install -c dic.la '/build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3' libtool: install: warning: relinking `dic.la' libtool: install: (cd /build/buildd/jags-3.3.0/src/modules/dic; /bin/bash /build/buildd/jags-3.3.0/libtool --tag CXX --mode=relink g++ -g -O2 -module -avoid-version -o dic.la -rpath /usr/lib/JAGS/modules-3 dic_la-dic.lo dic_la-DevianceMean.lo dic_la-DevianceTrace.lo dic_la-DevianceMonitorFactory.lo dic_la-PDMonitor.lo dic_la-PoptMonitor.lo dic_la-PDMonitorFactory.lo dic_la-KL.lo dic_la-KLNorm.lo dic_la-KLBin.lo dic_la-KLPois.lo dic_la-KLTab.lo dic_la-CalKL.lo dic_la-CalKLExact.lo dic_la-CalKLApprox.lo dic_la-PDTrace.lo dic_la-PDTraceFactory.lo dic_la-KLBern.lo ../../../src/lib/libjags.la -lm -ldl -inst-prefix-dir /build/buildd/jags-3.3.0/debian/jags) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbeginS.o .libs/dic_la-dic.o .libs/dic_la-DevianceMean.o .libs/dic_la-DevianceTrace.o .libs/dic_la-DevianceMonitorFactory.o .libs/dic_la-PDMonitor.o .libs/dic_la-PoptMonitor.o .libs/dic_la-PDMonitorFactory.o .libs/dic_la-KL.o .libs/dic_la-KLNorm.o .libs/dic_la-KLBin.o .libs/dic_la-KLPois.o .libs/dic_la-KLTab.o .libs/dic_la-CalKL.o .libs/dic_la-CalKLExact.o .libs/dic_la-CalKLApprox.o .libs/dic_la-PDTrace.o .libs/dic_la-PDTraceFactory.o .libs/dic_la-KLBern.o -L/build/buildd/jags-3.3.0/debian/jags/usr/lib -L/usr/lib -ljags -ldl -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/4.7/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-soname -Wl,dic.so -o .libs/dic.so libtool: install: /usr/bin/install -c .libs/dic.soT /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/dic.so libtool: install: /usr/bin/install -c .libs/dic.lai /build/buildd/jags-3.3.0/debian/jags/usr/lib/JAGS/modules-3/dic.la libtool: install: warning: remember to run `libtool --finish /usr/lib/JAGS/modules-3' make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/dic' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules/dic' make[5]: Entering directory `/build/buildd/jags-3.3.0/src/modules' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/modules' make[6]: Nothing to be done for `install-exec-am'. make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/modules' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/modules' make[4]: Leaving directory `/build/buildd/jags-3.3.0/src/modules' Making install in terminal make[4]: Entering directory `/build/buildd/jags-3.3.0/src/terminal' make install-am make[5]: Entering directory `/build/buildd/jags-3.3.0/src/terminal' make[6]: Entering directory `/build/buildd/jags-3.3.0/src/terminal' /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/bin' /usr/bin/install -c jags '/build/buildd/jags-3.3.0/debian/jags/usr/bin' /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/lib/jags' /bin/bash ../../libtool --mode=install /usr/bin/install -c jags-terminal '/build/buildd/jags-3.3.0/debian/jags/usr/lib/jags' libtool: install: warning: `../../src/lib/libjags.la' has not been installed in `/usr/lib' libtool: install: /usr/bin/install -c .libs/jags-terminal /build/buildd/jags-3.3.0/debian/jags/usr/lib/jags/jags-terminal make[6]: Nothing to be done for `install-data-am'. make[6]: Leaving directory `/build/buildd/jags-3.3.0/src/terminal' make[5]: Leaving directory `/build/buildd/jags-3.3.0/src/terminal' make[4]: Leaving directory `/build/buildd/jags-3.3.0/src/terminal' make[4]: Entering directory `/build/buildd/jags-3.3.0/src' make[5]: Entering directory `/build/buildd/jags-3.3.0/src' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/src' make[4]: Leaving directory `/build/buildd/jags-3.3.0/src' make[3]: Leaving directory `/build/buildd/jags-3.3.0/src' Making install in etc make[3]: Entering directory `/build/buildd/jags-3.3.0/etc' make[4]: Entering directory `/build/buildd/jags-3.3.0/etc' make[4]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/lib/pkgconfig' /usr/bin/install -c -m 644 jags.pc '/build/buildd/jags-3.3.0/debian/jags/usr/lib/pkgconfig' make[4]: Leaving directory `/build/buildd/jags-3.3.0/etc' make[3]: Leaving directory `/build/buildd/jags-3.3.0/etc' Making install in win make[3]: Entering directory `/build/buildd/jags-3.3.0/win' Making install in runtime32 make[4]: Entering directory `/build/buildd/jags-3.3.0/win/runtime32' make[5]: Entering directory `/build/buildd/jags-3.3.0/win/runtime32' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/win/runtime32' make[4]: Leaving directory `/build/buildd/jags-3.3.0/win/runtime32' Making install in runtime64 make[4]: Entering directory `/build/buildd/jags-3.3.0/win/runtime64' make[5]: Entering directory `/build/buildd/jags-3.3.0/win/runtime64' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/win/runtime64' make[4]: Leaving directory `/build/buildd/jags-3.3.0/win/runtime64' make[4]: Entering directory `/build/buildd/jags-3.3.0/win' make[5]: Entering directory `/build/buildd/jags-3.3.0/win' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/win' make[4]: Leaving directory `/build/buildd/jags-3.3.0/win' make[3]: Leaving directory `/build/buildd/jags-3.3.0/win' Making install in doc make[3]: Entering directory `/build/buildd/jags-3.3.0/doc' Making install in manual make[4]: Entering directory `/build/buildd/jags-3.3.0/doc/manual' make[5]: Entering directory `/build/buildd/jags-3.3.0/doc/manual' make[5]: Nothing to be done for `install-exec-am'. make[5]: Nothing to be done for `install-data-am'. make[5]: Leaving directory `/build/buildd/jags-3.3.0/doc/manual' make[4]: Leaving directory `/build/buildd/jags-3.3.0/doc/manual' make[4]: Entering directory `/build/buildd/jags-3.3.0/doc' make[5]: Entering directory `/build/buildd/jags-3.3.0/doc' make[5]: Nothing to be done for `install-exec-am'. /bin/mkdir -p '/build/buildd/jags-3.3.0/debian/jags/usr/share/man/man1' /usr/bin/install -c -m 644 jags.1 '/build/buildd/jags-3.3.0/debian/jags/usr/share/man/man1' make[5]: Leaving directory `/build/buildd/jags-3.3.0/doc' make[4]: Leaving directory `/build/buildd/jags-3.3.0/doc' make[3]: Leaving directory `/build/buildd/jags-3.3.0/doc' make[3]: Entering directory `/build/buildd/jags-3.3.0' make[4]: Entering directory `/build/buildd/jags-3.3.0' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/build/buildd/jags-3.3.0' make[3]: Leaving directory `/build/buildd/jags-3.3.0' make[2]: Leaving directory `/build/buildd/jags-3.3.0' find debian/ -name \*.la | \ xargs perl -p -i -e "s/dependency_libs='.*'/dependency_libs=''/" make[1]: Leaving directory `/build/buildd/jags-3.3.0' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_installcatalogs -a dh_installcron -a dh_installdebconf -a dh_installemacsen -a dh_installifupdown -a dh_installinfo -a dh_installinit -a dh_installmenu -a dh_installmime -a dh_installmodules -a dh_installlogcheck -a dh_installlogrotate -a dh_installpam -a dh_installppp -a dh_installudev -a dh_installwm -a dh_installxfonts -a dh_installgsettings -a dh_bugfiles -a dh_ucf -a dh_lintian -a dh_gconf -a dh_icons -a dh_perl -a dh_usrlocal -a dh_link -a dh_compress -a dh_fixperms -a dh_strip -a dh_strip debug symbol extraction: all non-arch-all packages for this build platform amd64: jags dh_strip debug symbol extraction: packages to act on: jags dh_strip debug symbol extraction: ignored packages: dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-deb: building package `jags-dbgsym' in `../jags-dbgsym_3.3.0-1_amd64.ddeb'. dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 117 pkgstriptranslations: processing jags (in debian/jags); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/jags/DEBIAN/control, package jags, directory debian/jags pkgstripfiles: Truncating usr/share/doc/jags/changelog.Debian.gz to topmost ten records pkgstripfiles: PNG optimization for package jags took 0 s dpkg-deb: warning: 'debian/jags/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `jags' in `../jags_3.3.0-1_amd64.deb'. dpkg-genchanges -B -mUbuntu/amd64 Build Daemon >../jags_3.3.0-1_amd64.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build jags-3.3.0 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20121029-0422 Publishing debug debs. chroot-autobuild/build/buildd/jags_3.3.0-1_amd64.deb: new debian package, version 2.0. size 1511702 bytes: control archive= 4058 bytes. 989 bytes, 20 lines control 7402 bytes, 106 lines md5sums 135 bytes, 7 lines * postinst #!/bin/sh 132 bytes, 7 lines * postrm #!/bin/sh 32 bytes, 2 lines shlibs Package: jags Version: 3.3.0-1 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Dirk Eddelbuettel Installed-Size: 2940 Depends: libblas3 | libblas.so.3 | libatlas3-base, libc6 (>= 2.14), libgcc1 (>= 1:4.1.1), liblapack3 | liblapack.so.3 | libatlas3-base, libltdl7 (>= 2.4.2), libstdc++6 (>= 4.6) Section: math Priority: optional Homepage: http://www-fis.iarc.fr/~martyn/software/jags/ Description: Just Another Gibbs Sampler for Bayesian MCMC simulation JAGS is Just Another Gibbs Sampler. It is a program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation not wholly unlike BUGS. . JAGS was written with three aims in mind: * To have an engine for the BUGS language that runs on Unix * To be extensible, allowing users to write their own functions, distributions and samplers. * To be a plaftorm for experimentation with ideas in Bayesian modelling chroot-autobuild/build/buildd/jags_3.3.0-1_amd64.deb: drwxr-xr-x root/root 0 2012-10-29 04:22 ./ drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/ drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/lib/ -rw-r--r-- root/root 902 2012-10-29 04:22 ./usr/lib/libjags.la drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/lib/JAGS/ drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/ -rw-r--r-- root/root 908 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/lecuyer.la -rw-r--r-- root/root 22888 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/msm.so -rw-r--r-- root/root 643912 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/glm.so -rw-r--r-- root/root 884 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/glm.la -rw-r--r-- root/root 89152 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/basemod.so -rw-r--r-- root/root 890 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/bugs.la -rw-r--r-- root/root 884 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/dic.la -rw-r--r-- root/root 908 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/basemod.la -rw-r--r-- root/root 18736 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/lecuyer.so -rw-r--r-- root/root 884 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/mix.la -rw-r--r-- root/root 884 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/msm.la -rw-r--r-- root/root 31320 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/mix.so -rw-r--r-- root/root 361432 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/bugs.so -rw-r--r-- root/root 64256 2012-10-29 04:22 ./usr/lib/JAGS/modules-3/dic.so drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/lib/jags/ -rwxr-xr-x root/root 109856 2012-10-29 04:22 ./usr/lib/jags/jags-terminal drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/lib/pkgconfig/ -rw-r--r-- root/root 307 2012-10-29 04:22 ./usr/lib/pkgconfig/jags.pc -rw-r--r-- root/root 137832 2012-10-29 04:22 ./usr/lib/libjrmath.so.0.0.0 -rw-r--r-- root/root 581272 2012-10-29 04:22 ./usr/lib/libjags.so.3.0.3 -rw-r--r-- root/root 914 2012-10-29 04:22 ./usr/lib/libjrmath.la drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/include/ drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/include/JAGS/ drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/include/JAGS/function/ -rw-r--r-- root/root 4347 2012-10-29 04:22 ./usr/include/JAGS/function/Function.h -rw-r--r-- root/root 1164 2012-10-29 04:22 ./usr/include/JAGS/function/FuncTab.h -rw-r--r-- root/root 2125 2012-10-29 04:22 ./usr/include/JAGS/function/ArrayFunction.h -rw-r--r-- root/root 1427 2012-10-29 04:22 ./usr/include/JAGS/function/ScalarFunction.h -rw-r--r-- root/root 1751 2012-10-29 04:22 ./usr/include/JAGS/function/VectorFunction.h -rw-r--r-- root/root 1183 2012-10-29 04:22 ./usr/include/JAGS/function/LinkFunction.h -rw-r--r-- root/root 469 2012-10-29 04:22 ./usr/include/JAGS/function/FuncError.h -rw-r--r-- root/root 1329 2012-10-29 04:22 ./usr/include/JAGS/function/FunctionPtr.h drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/include/JAGS/distribution/ -rw-r--r-- root/root 993 2012-10-29 04:22 ./usr/include/JAGS/distribution/DistPtr.h -rw-r--r-- root/root 5350 2012-10-29 04:22 ./usr/include/JAGS/distribution/Distribution.h -rw-r--r-- root/root 489 2012-10-29 04:22 ./usr/include/JAGS/distribution/DistError.h -rw-r--r-- root/root 5398 2012-10-29 04:22 ./usr/include/JAGS/distribution/VectorDist.h -rw-r--r-- root/root 5447 2012-10-29 04:22 ./usr/include/JAGS/distribution/ArrayDist.h -rw-r--r-- root/root 854 2012-10-29 04:22 ./usr/include/JAGS/distribution/DistTab.h -rw-r--r-- root/root 3574 2012-10-29 04:22 ./usr/include/JAGS/distribution/ScalarDist.h -rw-r--r-- root/root 16682 2012-10-29 04:22 ./usr/include/JAGS/JRmath.h -rw-r--r-- root/root 126 2012-10-29 04:22 ./usr/include/JAGS/version.h drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/include/JAGS/compiler/ -rw-r--r-- root/root 1902 2012-10-29 04:22 ./usr/include/JAGS/compiler/MixtureFactory.h -rw-r--r-- root/root 1781 2012-10-29 04:22 ./usr/include/JAGS/compiler/ObsFuncTab.h -rw-r--r-- root/root 515 2012-10-29 04:22 ./usr/include/JAGS/compiler/NodeFactory.h -rw-r--r-- root/root 1103 2012-10-29 04:22 ./usr/include/JAGS/compiler/CounterTab.h -rw-r--r-- root/root 3986 2012-10-29 04:22 ./usr/include/JAGS/compiler/Compiler.h -rw-r--r-- root/root 1570 2012-10-29 04:22 ./usr/include/JAGS/compiler/ConstantFactory.h -rw-r--r-- root/root 604 2012-10-29 04:22 ./usr/include/JAGS/compiler/Counter.h -rw-r--r-- root/root 2228 2012-10-29 04:22 ./usr/include/JAGS/compiler/LogicalFactory.h -rw-r--r-- root/root 2954 2012-10-29 04:22 ./usr/include/JAGS/compiler/ParseTree.h drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/include/JAGS/sarray/ -rw-r--r-- root/root 3844 2012-10-29 04:22 ./usr/include/JAGS/sarray/SArray.h -rw-r--r-- root/root 1688 2012-10-29 04:22 ./usr/include/JAGS/sarray/RangeIterator.h -rw-r--r-- root/root 4891 2012-10-29 04:22 ./usr/include/JAGS/sarray/Range.h drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/include/JAGS/util/ -rw-r--r-- root/root 2589 2012-10-29 04:22 ./usr/include/JAGS/util/dim.h -rw-r--r-- root/root 129 2012-10-29 04:22 ./usr/include/JAGS/util/integer.h -rw-r--r-- root/root 506 2012-10-29 04:22 ./usr/include/JAGS/util/logical.h -rw-r--r-- root/root 301 2012-10-29 04:22 ./usr/include/JAGS/util/nainf.h drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/include/JAGS/model/ -rw-r--r-- root/root 4173 2012-10-29 04:22 ./usr/include/JAGS/model/NodeArray.h -rw-r--r-- root/root 3172 2012-10-29 04:22 ./usr/include/JAGS/model/Monitor.h -rw-r--r-- root/root 1582 2012-10-29 04:22 ./usr/include/JAGS/model/MonitorControl.h -rw-r--r-- root/root 5551 2012-10-29 04:22 ./usr/include/JAGS/model/BUGSModel.h -rw-r--r-- root/root 660 2012-10-29 04:22 ./usr/include/JAGS/model/MonitorInfo.h -rw-r--r-- root/root 3744 2012-10-29 04:22 ./usr/include/JAGS/model/SymTab.h -rw-r--r-- root/root 6480 2012-10-29 04:22 ./usr/include/JAGS/model/Model.h -rw-r--r-- root/root 1550 2012-10-29 04:22 ./usr/include/JAGS/model/MonitorFactory.h drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/include/JAGS/sampler/ -rw-r--r-- root/root 751 2012-10-29 04:22 ./usr/include/JAGS/sampler/SampleMethod.h -rw-r--r-- root/root 2878 2012-10-29 04:22 ./usr/include/JAGS/sampler/Slicer.h -rw-r--r-- root/root 2723 2012-10-29 04:22 ./usr/include/JAGS/sampler/RWMetropolis.h -rw-r--r-- root/root 788 2012-10-29 04:22 ./usr/include/JAGS/sampler/SamplerFactory.h -rw-r--r-- root/root 1220 2012-10-29 04:22 ./usr/include/JAGS/sampler/SingletonFactory.h -rw-r--r-- root/root 1541 2012-10-29 04:22 ./usr/include/JAGS/sampler/Linear.h -rw-r--r-- root/root 2511 2012-10-29 04:22 ./usr/include/JAGS/sampler/Metropolis.h -rw-r--r-- root/root 1120 2012-10-29 04:22 ./usr/include/JAGS/sampler/StepAdapter.h -rw-r--r-- root/root 937 2012-10-29 04:22 ./usr/include/JAGS/sampler/ParallelSampler.h -rw-r--r-- root/root 2137 2012-10-29 04:22 ./usr/include/JAGS/sampler/Sampler.h -rw-r--r-- root/root 4844 2012-10-29 04:22 ./usr/include/JAGS/sampler/TemperedMetropolis.h -rw-r--r-- root/root 5295 2012-10-29 04:22 ./usr/include/JAGS/sampler/GraphView.h drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/include/JAGS/module/ -rw-r--r-- root/root 462 2012-10-29 04:22 ./usr/include/JAGS/module/ModuleError.h drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/include/JAGS/graph/ -rw-r--r-- root/root 1073 2012-10-29 04:22 ./usr/include/JAGS/graph/VSLogicalNode.h -rw-r--r-- root/root 1267 2012-10-29 04:22 ./usr/include/JAGS/graph/ArrayStochasticNode.h -rw-r--r-- root/root 4974 2012-10-29 04:22 ./usr/include/JAGS/graph/Node.h -rw-r--r-- root/root 2815 2012-10-29 04:22 ./usr/include/JAGS/graph/AggNode.h -rw-r--r-- root/root 1375 2012-10-29 04:22 ./usr/include/JAGS/graph/ScalarStochasticNode.h -rw-r--r-- root/root 6418 2012-10-29 04:22 ./usr/include/JAGS/graph/StochasticNode.h -rw-r--r-- root/root 1816 2012-10-29 04:22 ./usr/include/JAGS/graph/ConstantNode.h -rw-r--r-- root/root 1388 2012-10-29 04:22 ./usr/include/JAGS/graph/LogicalNode.h -rw-r--r-- root/root 2659 2012-10-29 04:22 ./usr/include/JAGS/graph/GraphMarks.h -rw-r--r-- root/root 3817 2012-10-29 04:22 ./usr/include/JAGS/graph/DeterministicNode.h -rw-r--r-- root/root 1243 2012-10-29 04:22 ./usr/include/JAGS/graph/LinkNode.h -rw-r--r-- root/root 1061 2012-10-29 04:22 ./usr/include/JAGS/graph/ScalarLogicalNode.h -rw-r--r-- root/root 290 2012-10-29 04:22 ./usr/include/JAGS/graph/NodeError.h -rw-r--r-- root/root 966 2012-10-29 04:22 ./usr/include/JAGS/graph/ArrayLogicalNode.h -rw-r--r-- root/root 1974 2012-10-29 04:22 ./usr/include/JAGS/graph/Graph.h -rw-r--r-- root/root 1259 2012-10-29 04:22 ./usr/include/JAGS/graph/VectorStochasticNode.h -rw-r--r-- root/root 3495 2012-10-29 04:22 ./usr/include/JAGS/graph/MixtureNode.h -rw-r--r-- root/root 1162 2012-10-29 04:22 ./usr/include/JAGS/graph/VectorLogicalNode.h drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/include/JAGS/rng/ -rw-r--r-- root/root 1926 2012-10-29 04:22 ./usr/include/JAGS/rng/RNG.h -rw-r--r-- root/root 1159 2012-10-29 04:22 ./usr/include/JAGS/rng/RNGFactory.h -rw-r--r-- root/root 630 2012-10-29 04:22 ./usr/include/JAGS/rng/RmathRNG.h -rw-r--r-- root/root 1266 2012-10-29 04:22 ./usr/include/JAGS/rng/TruncatedNormal.h -rw-r--r-- root/root 6975 2012-10-29 04:22 ./usr/include/JAGS/Console.h -rw-r--r-- root/root 2785 2012-10-29 04:22 ./usr/include/JAGS/Module.h drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/share/ drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/share/man/ drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/share/man/man1/ -rw-r--r-- root/root 584 2012-10-29 04:22 ./usr/share/man/man1/jags.1.gz drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/share/lintian/ drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 226 2012-10-29 04:19 ./usr/share/lintian/overrides/jags drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/share/doc/jags/ -rw-r--r-- root/root 165398 2012-10-29 04:22 ./usr/share/doc/jags/jags_installation_manual.pdf.gz -rw-r--r-- root/root 2384 2012-10-29 04:19 ./usr/share/doc/jags/copyright -rw-r--r-- root/root 660 2012-10-29 04:22 ./usr/share/doc/jags/changelog.Debian.gz -rw-r--r-- root/root 143384 2012-10-29 04:22 ./usr/share/doc/jags/jags_developer_manual.pdf.gz -rw-r--r-- root/root 321100 2012-10-29 04:22 ./usr/share/doc/jags/jags_user_manual.pdf.gz drwxr-xr-x root/root 0 2012-10-29 04:22 ./usr/bin/ -rwxr-xr-x root/root 923 2012-10-29 04:22 ./usr/bin/jags lrwxrwxrwx root/root 0 2012-10-29 04:22 ./usr/lib/libjags.so.3 -> libjags.so.3.0.3 lrwxrwxrwx root/root 0 2012-10-29 04:22 ./usr/lib/libjrmath.so.0 -> libjrmath.so.0.0.0 lrwxrwxrwx root/root 0 2012-10-29 04:22 ./usr/lib/libjags.so -> libjags.so.3.0.3 lrwxrwxrwx root/root 0 2012-10-29 04:22 ./usr/lib/libjrmath.so -> libjrmath.so.0.0.0 jags_3.3.0-1_amd64.changes: Format: 1.8 Date: Tue, 02 Oct 2012 06:06:54 -0500 Source: jags Binary: jags Architecture: amd64 Version: 3.3.0-1 Distribution: raring-proposed Urgency: low Maintainer: Ubuntu/amd64 Build Daemon Changed-By: Dirk Eddelbuettel Description: jags - Just Another Gibbs Sampler for Bayesian MCMC simulation Changes: jags (3.3.0-1) unstable; urgency=low . * New upstream release Checksums-Sha1: 7816783b452cbd807172cfa6b906fd7e12c3df08 1511702 jags_3.3.0-1_amd64.deb Checksums-Sha256: 0d35d7d4ec0fb63d7e47ff0fd8a63e23c3d3a78f181833696cd0ded9f76753d9 1511702 jags_3.3.0-1_amd64.deb Files: 260a43468a3cd97b44ad7b6d915b083e 1511702 math optional jags_3.3.0-1_amd64.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20121029-0422 Build needed 00:03:00, 160088k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', 'c38deec18984b60b961d322821b98a8cd6a26e47'] Scanning for processes to kill in build /home/buildd/build-c38deec18984b60b961d322821b98a8cd6a26e47/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'c38deec18984b60b961d322821b98a8cd6a26e47'] Unmounting chroot for build c38deec18984b60b961d322821b98a8cd6a26e47... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'c38deec18984b60b961d322821b98a8cd6a26e47'] Removing build c38deec18984b60b961d322821b98a8cd6a26e47