kissplice 2.5.1-1 source package in Ubuntu


kissplice (2.5.1-1) unstable; urgency=medium

  * Team upload.

  [ Steffen Möller ]
  * Added ref to bioconda

  [ Antoni Villalonga ]
  * New upstream version 2.5.1
  * Python2 to Python3 (Closes: 936798)
  * tests-2to3.patch: tests migration from Python2 to 3
  * spelling.patch: Amend spelling typos
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * Standards-Version: 4.5.0

  [ Nilesh Patra ]
  * Fix and add autopkgtests

  [ Andreas Tille ]
  * Add debian/TODO linking to build time errors
  * Remove extra license file

 -- Nilesh Patra <email address hidden>  Fri, 29 May 2020 02:55:28 +0530

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Uploaded by:
Debian Med
Uploaded to:
Original maintainer:
Debian Med
any-amd64 any-arm64 any-mips64 any-mips64el any-ia64 any-ppc64 any-ppc64el any-sparc64
Medium Urgency

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Series Pocket Published Component Section


File Size SHA-256 Checksum
kissplice_2.5.1-1.dsc 2.2 KiB ce933c645e7c15e7f882d62cb866f819c53422948f6aee3946b6b92273d5f056
kissplice_2.5.1.orig.tar.gz 12.7 MiB f6f014adb27cb022c853420096d06802e8e16212d2bc835fdd6898a07d095e64
kissplice_2.5.1-1.debian.tar.xz 12.8 KiB be037ba897f6f367ecdf930a54c51283ee931bbcb7441e0d55701be43d2c1679

No changes file available.

Binary packages built by this source

kissplice: Detection of various kinds of polymorphisms in RNA-seq data

 KisSplice is a piece of software that enables the analysis of RNA-seq data
 with or without a reference genome. It is an exact local transcriptome
 assembler that allows one to identify SNPs, indels and alternative splicing
 events. It can deal with an arbitrary number of biological conditions, and
 will quantify each variant in each condition.
 It has been tested on Illumina datasets of up to 1G reads.
 Its memory consumption is around 5Gb for 100M reads.

kissplice-dbgsym: debug symbols for kissplice