RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux bos01-arm64-015 4.4.0-98-generic #121-Ubuntu SMP Tue Oct 10 14:23:54 UTC 2017 aarch64 Buildd toolchain package versions: launchpad-buildd_154 python-lpbuildd_154 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.3 dpkg-dev_1.18.4ubuntu1.2 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 10 Nov 12:59:43 ntpdate[1823]: adjust time server 10.211.37.1 offset 0.009008 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=bionic --arch=armhf PACKAGEBUILD-13629296 /home/buildd/filecache-default/b70461af4419c13dbae7acd6fe74d075a1a9550f Creating target for build PACKAGEBUILD-13629296 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=bionic --arch=armhf PACKAGEBUILD-13629296 Starting target for build PACKAGEBUILD-13629296 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=bionic --arch=armhf PACKAGEBUILD-13629296 'deb http://ftpmaster.internal/ubuntu bionic main universe' Overriding sources.list in build-PACKAGEBUILD-13629296 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=bionic --arch=armhf PACKAGEBUILD-13629296 Updating target for build PACKAGEBUILD-13629296 Get:1 http://ftpmaster.internal/ubuntu bionic InRelease [235 kB] Get:2 http://ftpmaster.internal/ubuntu bionic/main armhf Packages [1025 kB] Get:3 http://ftpmaster.internal/ubuntu bionic/main Translation-en [541 kB] Get:4 http://ftpmaster.internal/ubuntu bionic/universe armhf Packages [8002 kB] Get:5 http://ftpmaster.internal/ubuntu bionic/universe Translation-en [4860 kB] Fetched 14.7 MB in 6s (2226 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libustr-1.0-1 Use 'sudo apt autoremove' to remove it. The following packages will be upgraded: apt apt-transport-https base-files base-passwd binutils binutils-arm-linux-gnueabihf binutils-common build-essential coreutils cpp-7 dpkg dpkg-dev g++-7 gcc-7 gcc-7-base gnupg gnupg-agent gpgv libapt-pkg5.0 libasan4 libatomic1 libbinutils libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcilkrts5 libcurl3-gnutls libdpkg-perl libgcc-7-dev libgcc1 libgcrypt20 libgomp1 libhogweed4 libkeyutils1 libnettle6 libp11-kit0 libpcre3 libpng16-16 libseccomp2 libsemanage-common libsemanage1 libsqlite3-0 libstdc++-7-dev libstdc++6 libsystemd0 libubsan0 libudev1 linux-libc-dev multiarch-support pinentry-curses systemd systemd-sysv sysvinit-utils tzdata 58 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 39.7 MB of archives. After this operation, 2017 kB disk space will be freed. Get:1 http://ftpmaster.internal/ubuntu bionic/main armhf base-files armhf 10ubuntu1 [55.9 kB] Get:2 http://ftpmaster.internal/ubuntu bionic/main armhf coreutils armhf 8.26-3ubuntu4 [1111 kB] Get:3 http://ftpmaster.internal/ubuntu bionic/main armhf dpkg armhf 1.19.0.4ubuntu1 [1100 kB] Get:4 http://ftpmaster.internal/ubuntu bionic/main armhf libc6-dev armhf 2.26-0ubuntu2 [1900 kB] Get:5 http://ftpmaster.internal/ubuntu bionic/main armhf libc-dev-bin armhf 2.26-0ubuntu2 [60.1 kB] Get:6 http://ftpmaster.internal/ubuntu bionic/main armhf linux-libc-dev armhf 4.13.0-16.19 [934 kB] Get:7 http://ftpmaster.internal/ubuntu bionic/main armhf libgomp1 armhf 7.2.0-12ubuntu1 [65.8 kB] Get:8 http://ftpmaster.internal/ubuntu bionic/main armhf gcc-7-base armhf 7.2.0-12ubuntu1 [18.3 kB] Get:9 http://ftpmaster.internal/ubuntu bionic/main armhf libgcc1 armhf 1:7.2.0-12ubuntu1 [38.9 kB] Get:10 http://ftpmaster.internal/ubuntu bionic/main armhf libatomic1 armhf 7.2.0-12ubuntu1 [6274 B] Get:11 http://ftpmaster.internal/ubuntu bionic/main armhf libasan4 armhf 7.2.0-12ubuntu1 [330 kB] Get:12 http://ftpmaster.internal/ubuntu bionic/main armhf libubsan0 armhf 7.2.0-12ubuntu1 [109 kB] Get:13 http://ftpmaster.internal/ubuntu bionic/main armhf libcilkrts5 armhf 7.2.0-12ubuntu1 [36.1 kB] Get:14 http://ftpmaster.internal/ubuntu bionic/main armhf cpp-7 armhf 7.2.0-12ubuntu1 [5288 kB] Get:15 http://ftpmaster.internal/ubuntu bionic/main armhf libcc1-0 armhf 7.2.0-12ubuntu1 [32.3 kB] Get:16 http://ftpmaster.internal/ubuntu bionic/main armhf g++-7 armhf 7.2.0-12ubuntu1 [6035 kB] Get:17 http://ftpmaster.internal/ubuntu bionic/main armhf gcc-7 armhf 7.2.0-12ubuntu1 [5919 kB] Get:18 http://ftpmaster.internal/ubuntu bionic/main armhf libgcc-7-dev armhf 7.2.0-12ubuntu1 [706 kB] Get:19 http://ftpmaster.internal/ubuntu bionic/main armhf libstdc++-7-dev armhf 7.2.0-12ubuntu1 [1531 kB] Get:20 http://ftpmaster.internal/ubuntu bionic/main armhf libstdc++6 armhf 7.2.0-12ubuntu1 [358 kB] Get:21 http://ftpmaster.internal/ubuntu bionic/main armhf libbinutils armhf 2.29.1-6ubuntu1 [307 kB] Get:22 http://ftpmaster.internal/ubuntu bionic/main armhf binutils armhf 2.29.1-6ubuntu1 [3296 B] Get:23 http://ftpmaster.internal/ubuntu bionic/main armhf binutils-common armhf 2.29.1-6ubuntu1 [190 kB] Get:24 http://ftpmaster.internal/ubuntu bionic/main armhf binutils-arm-linux-gnueabihf armhf 2.29.1-6ubuntu1 [2187 kB] Get:25 http://ftpmaster.internal/ubuntu bionic/main armhf libc6 armhf 2.26-0ubuntu2 [2212 kB] Get:26 http://ftpmaster.internal/ubuntu bionic/main armhf base-passwd armhf 3.5.44 [45.9 kB] Get:27 http://ftpmaster.internal/ubuntu bionic/main armhf libc-bin armhf 2.26-0ubuntu2 [477 kB] Get:28 http://ftpmaster.internal/ubuntu bionic/main armhf sysvinit-utils armhf 2.88dsf-59.10ubuntu1 [17.2 kB] Get:29 http://ftpmaster.internal/ubuntu bionic/main armhf libudev1 armhf 234-2ubuntu12 [46.6 kB] Get:30 http://ftpmaster.internal/ubuntu bionic/main armhf libapt-pkg5.0 armhf 1.5.1 [712 kB] Get:31 http://ftpmaster.internal/ubuntu bionic/main armhf libgcrypt20 armhf 1.7.9-1 [341 kB] Get:32 http://ftpmaster.internal/ubuntu bionic/main armhf gpgv armhf 2.1.15-1ubuntu8 [157 kB] Get:33 http://ftpmaster.internal/ubuntu bionic/main armhf apt armhf 1.5.1 [1081 kB] Get:34 http://ftpmaster.internal/ubuntu bionic/main armhf libcap2 armhf 1:2.25-1.1 [11.9 kB] Get:35 http://ftpmaster.internal/ubuntu bionic/main armhf libseccomp2 armhf 2.3.1-2.1ubuntu3 [29.9 kB] Get:36 http://ftpmaster.internal/ubuntu bionic/main armhf systemd armhf 234-2ubuntu12 [2624 kB] Get:37 http://ftpmaster.internal/ubuntu bionic/main armhf libsystemd0 armhf 234-2ubuntu12 [190 kB] Get:38 http://ftpmaster.internal/ubuntu bionic/main armhf systemd-sysv armhf 234-2ubuntu12 [10.8 kB] Get:39 http://ftpmaster.internal/ubuntu bionic/main armhf libcap-ng0 armhf 0.7.7-3.1 [9816 B] Get:40 http://ftpmaster.internal/ubuntu bionic/main armhf libpcre3 armhf 2:8.39-5ubuntu3 [209 kB] Get:41 http://ftpmaster.internal/ubuntu bionic/main armhf libsemanage-common all 2.7-2 [6916 B] Get:42 http://ftpmaster.internal/ubuntu bionic/main armhf libsemanage1 armhf 2.7-2 [72.3 kB] Get:43 http://ftpmaster.internal/ubuntu bionic/main armhf libnettle6 armhf 3.3-2 [106 kB] Get:44 http://ftpmaster.internal/ubuntu bionic/main armhf libhogweed4 armhf 3.3-2 [126 kB] Get:45 http://ftpmaster.internal/ubuntu bionic/main armhf libp11-kit0 armhf 0.23.9-2 [162 kB] Get:46 http://ftpmaster.internal/ubuntu bionic/main armhf pinentry-curses armhf 1.0.0-3 [30.4 kB] Get:47 http://ftpmaster.internal/ubuntu bionic/main armhf gnupg armhf 2.1.15-1ubuntu8 [711 kB] Get:48 http://ftpmaster.internal/ubuntu bionic/main armhf gnupg-agent armhf 2.1.15-1ubuntu8 [211 kB] Get:49 http://ftpmaster.internal/ubuntu bionic/main armhf libsqlite3-0 armhf 3.20.1-2 [416 kB] Get:50 http://ftpmaster.internal/ubuntu bionic/main armhf multiarch-support armhf 2.26-0ubuntu2 [6832 B] Get:51 http://ftpmaster.internal/ubuntu bionic/main armhf tzdata all 2017c-1 [188 kB] Get:52 http://ftpmaster.internal/ubuntu bionic/main armhf libkeyutils1 armhf 1.5.9-9.1ubuntu1 [8560 B] Get:53 http://ftpmaster.internal/ubuntu bionic/main armhf libpng16-16 armhf 1.6.34-1 [159 kB] Get:54 http://ftpmaster.internal/ubuntu bionic/main armhf libcurl3-gnutls armhf 7.55.1-1ubuntu2.1 [167 kB] Get:55 http://ftpmaster.internal/ubuntu bionic/main armhf apt-transport-https armhf 1.5.1 [30.5 kB] Get:56 http://ftpmaster.internal/ubuntu bionic/main armhf dpkg-dev all 1.19.0.4ubuntu1 [607 kB] Get:57 http://ftpmaster.internal/ubuntu bionic/main armhf libdpkg-perl all 1.19.0.4ubuntu1 [211 kB] Get:58 http://ftpmaster.internal/ubuntu bionic/main armhf build-essential armhf 12.4ubuntu1 [4752 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 39.7 MB in 6s (6020 kB/s) (Reading database ... 12457 files and directories currently installed.) Preparing to unpack .../base-files_10ubuntu1_armhf.deb ... Unpacking base-files (10ubuntu1) over (9.6ubuntu101) ... Setting up base-files (10ubuntu1) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12457 files and directories currently installed.) Preparing to unpack .../coreutils_8.26-3ubuntu4_armhf.deb ... Unpacking coreutils (8.26-3ubuntu4) over (8.26-3ubuntu3) ... Setting up coreutils (8.26-3ubuntu4) ... (Reading database ... 12457 files and directories currently installed.) Preparing to unpack .../dpkg_1.19.0.4ubuntu1_armhf.deb ... Unpacking dpkg (1.19.0.4ubuntu1) over (1.18.24ubuntu1) ... Setting up dpkg (1.19.0.4ubuntu1) ... Installing new version of config file /etc/alternatives/README ... Installing new version of config file /etc/cron.daily/dpkg ... 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Processing triggers for libc-bin (2.26-0ubuntu2) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-13629296 armhf bionic -c chroot:build-PACKAGEBUILD-13629296 --arch=armhf --dist=bionic --nolog libbiod_0.1.0-4build1.dsc Initiating build PACKAGEBUILD-13629296 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-98-generic #121-Ubuntu SMP Tue Oct 10 14:23:54 UTC 2017 armv7l sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos01-arm64-015.buildd +==============================================================================+ | libbiod 0.1.0-4build1 (armhf) 10 Nov 2017 13:00 | +==============================================================================+ Package: libbiod Version: 0.1.0-4build1 Source Version: 0.1.0-4build1 Distribution: bionic Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf I: NOTICE: Log filtering will replace 'build/libbiod-A8LmuR/libbiod-0.1.0' with '<>' I: NOTICE: Log filtering will replace 'build/libbiod-A8LmuR' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-13629296/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- libbiod_0.1.0-4build1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-sh5Rov/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-sh5Rov/apt_archive ./ InRelease Get:2 copy:/<>/resolver-sh5Rov/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-sh5Rov/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-sh5Rov/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-sh5Rov/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (63.9 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libustr-1.0-1 Use 'apt autoremove' to remove it. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-sh5Rov/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (70.9 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12464 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 10.4), ldc, meson (>= 0.40), pkg-config, libundead-dev (>= 1.0.7), zlib1g-dev Filtered Build-Depends: debhelper (>= 10.4), ldc, meson (>= 0.40), pkg-config, libundead-dev (>= 1.0.7), zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-libbiod-dummy' in '/<>/resolver-szrK3A/apt_archive/sbuild-build-depends-libbiod-dummy.deb'. Ign:1 copy:/<>/resolver-szrK3A/apt_archive ./ InRelease Get:2 copy:/<>/resolver-szrK3A/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-szrK3A/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-szrK3A/apt_archive ./ Sources [255 B] Get:5 copy:/<>/resolver-szrK3A/apt_archive ./ Packages [568 B] Fetched 2942 B in 0s (65.2 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install libbiod build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libustr-1.0-1 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism file gettext gettext-base groff-base intltool-debian ldc libarchive-zip-perl libbsd0 libcroco3 libedit2 libexpat1 libfile-stripnondeterminism-perl libglib2.0-0 libicu59 libllvm5.0 libmagic-mgc libmagic1 libmpdec2 libphobos2-ldc-dev libphobos2-ldc74 libpipeline1 libpython3-stdlib libpython3.6-minimal libpython3.6-stdlib libsigsegv2 libtimedate-perl libtool libundead-dev libundead0 libxml2 m4 man-db meson mime-support ninja-build pkg-config po-debconf python3 python3-minimal python3.6 python3.6-minimal zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.6-venv python3.6-doc binfmt-support Recommended packages: curl | wget | lynx-cur libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following packages will be REMOVED: pkg-create-dbgsym* The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism file gettext gettext-base groff-base intltool-debian ldc libarchive-zip-perl libbsd0 libcroco3 libedit2 libexpat1 libfile-stripnondeterminism-perl libglib2.0-0 libicu59 libllvm5.0 libmagic-mgc libmagic1 libmpdec2 libphobos2-ldc-dev libphobos2-ldc74 libpipeline1 libpython3-stdlib libpython3.6-minimal libpython3.6-stdlib libsigsegv2 libtimedate-perl libtool libundead-dev libundead0 libxml2 m4 man-db meson mime-support ninja-build pkg-config po-debconf python3 python3-minimal python3.6 python3.6-minimal sbuild-build-depends-libbiod-dummy zlib1g-dev 0 upgraded, 52 newly installed, 1 to remove and 0 not upgraded. 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Setting up libmagic1:armhf (1:5.32-1) ... Setting up libcroco3:armhf (0.6.12-1) ... Setting up libundead0 (1.0.7-1build1) ... Setting up pkg-config (0.29.1-0ubuntu2) ... Processing triggers for libc-bin (2.26-0ubuntu2) ... Setting up autotools-dev (20161112.1+nmu1) ... Setting up libphobos2-ldc-dev (1:1.4.0-3ubuntu1) ... Setting up bsdmainutils (9.0.12+nmu1ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up ldc (1:1.4.0-3ubuntu1) ... Setting up ninja-build (1.7.2-3) ... Setting up autopoint (0.19.8.1-4ubuntu1) ... Setting up libmpdec2:armhf (2.4.2-1) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-0ubuntu2) ... Setting up libfile-stripnondeterminism-perl (0.040-1) ... Setting up libpython3.6-stdlib:armhf (3.6.3-1ubuntu1) ... Setting up python3.6 (3.6.3-1ubuntu1) ... Setting up gettext (0.19.8.1-4ubuntu1) ... 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Processing triggers for libc-bin (2.26-0ubuntu2) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-98-generic arm64 (armv7l) Toolchain package versions: binutils_2.29.1-6ubuntu1 dpkg-dev_1.19.0.4ubuntu1 g++-7_7.2.0-12ubuntu1 gcc-7_7.2.0-12ubuntu1 libc6-dev_2.26-0ubuntu2 libstdc++-7-dev_7.2.0-12ubuntu1 libstdc++6_7.2.0-12ubuntu1 linux-libc-dev_4.13.0-16.19 Package versions: adduser_3.113+nmu3ubuntu5 advancecomp_2.0-1 apt_1.5.1 apt-transport-https_1.5.1 autoconf_2.69-11 automake_1:1.15.1-3ubuntu1 autopoint_0.19.8.1-4ubuntu1 autotools-dev_20161112.1+nmu1 base-files_10ubuntu1 base-passwd_3.5.44 bash_4.4-5ubuntu1 binutils_2.29.1-6ubuntu1 binutils-arm-linux-gnueabihf_2.29.1-6ubuntu1 binutils-common_2.29.1-6ubuntu1 bsdmainutils_9.0.12+nmu1ubuntu1 bsdutils_1:2.30.1-0ubuntu4 build-essential_12.4ubuntu1 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.26-3ubuntu4 cpp_4:7.2.0-1ubuntu1 cpp-7_7.2.0-12ubuntu1 dash_0.5.8-2.3ubuntu1 debconf_1.5.63 debhelper_10.10.5ubuntu1 debianutils_4.8.2 dh-autoreconf_14 dh-python_2.20170125 dh-strip-nondeterminism_0.040-1 diffutils_1:3.6-1 dmsetup_2:1.02.137-2ubuntu3 dpkg_1.19.0.4ubuntu1 dpkg-dev_1.19.0.4ubuntu1 e2fslibs_1.43.5-1 e2fsprogs_1.43.5-1 fakeroot_1.21-1ubuntu2 fdisk_2.30.1-0ubuntu4 file_1:5.32-1 findutils_4.6.0+git+20170729-2 g++_4:7.2.0-1ubuntu1 g++-7_7.2.0-12ubuntu1 gcc_4:7.2.0-1ubuntu1 gcc-7_7.2.0-12ubuntu1 gcc-7-base_7.2.0-12ubuntu1 gettext_0.19.8.1-4ubuntu1 gettext-base_0.19.8.1-4ubuntu1 gnupg_2.1.15-1ubuntu8 gnupg-agent_2.1.15-1ubuntu8 gpgv_2.1.15-1ubuntu8 grep_3.1-2 groff-base_1.22.3-9 gzip_1.6-5ubuntu1 hostname_3.18 init_1.49ubuntu1 init-system-helpers_1.49ubuntu1 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 ldc_1:1.4.0-3ubuntu1 libacl1_2.2.52-3build1 libapparmor1_2.11.0-2ubuntu17 libapt-pkg5.0_1.5.1 libarchive-zip-perl_1.59-1 libasan4_7.2.0-12ubuntu1 libasn1-8-heimdal_7.4.0.dfsg.1-2 libassuan0_2.4.3-3 libatomic1_7.2.0-12ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.7.7-1ubuntu2 libaudit1_1:2.7.7-1ubuntu2 libbinutils_2.29.1-6ubuntu1 libblkid1_2.30.1-0ubuntu4 libbsd0_0.8.6-2 libbz2-1.0_1.0.6-8.1 libc-bin_2.26-0ubuntu2 libc-dev-bin_2.26-0ubuntu2 libc6_2.26-0ubuntu2 libc6-dev_2.26-0ubuntu2 libcap-ng0_0.7.7-3.1 libcap2_1:2.25-1.1 libcc1-0_7.2.0-12ubuntu1 libcilkrts5_7.2.0-12ubuntu1 libcomerr2_1.43.5-1 libcroco3_0.6.12-1 libcryptsetup4_2:1.7.3-4ubuntu1 libcurl3-gnutls_7.55.1-1ubuntu2.1 libdb5.3_5.3.28-13.1 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.137-2ubuntu3 libdpkg-perl_1.19.0.4ubuntu1 libedit2_3.1-20170329-1 libexpat1_2.2.3-1 libfakeroot_1.21-1ubuntu2 libfdisk1_2.30.1-0ubuntu4 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.040-1 libgcc-7-dev_7.2.0-12ubuntu1 libgcc1_1:7.2.0-12ubuntu1 libgcrypt20_1.7.9-1 libgdbm3_1.8.3-14 libglib2.0-0_2.54.1-1ubuntu1 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.8-6ubuntu3 libgomp1_7.2.0-12ubuntu1 libgpg-error0_1.27-3 libgssapi-krb5-2_1.15.1-2 libgssapi3-heimdal_7.4.0.dfsg.1-2 libhcrypto4-heimdal_7.4.0.dfsg.1-2 libheimbase1-heimdal_7.4.0.dfsg.1-2 libheimntlm0-heimdal_7.4.0.dfsg.1-2 libhogweed4_3.3-2 libhx509-5-heimdal_7.4.0.dfsg.1-2 libicu59_59.1-3ubuntu1 libidn11_1.33-2 libidn2-0_2.0.2-5 libip4tc0_1.6.1-2ubuntu1 libisl15_0.18-1 libk5crypto3_1.15.1-2 libkeyutils1_1.5.9-9.1ubuntu1 libkmod2_24-1ubuntu2 libkrb5-26-heimdal_7.4.0.dfsg.1-2 libkrb5-3_1.15.1-2 libkrb5support0_1.15.1-2 libksba8_1.3.5-2 libldap-2.4-2_2.4.45+dfsg-1ubuntu1 libldap-common_2.4.45+dfsg-1ubuntu1 libllvm5.0_1:5.0-4 liblockfile-bin_1.14-1 liblockfile1_1.14-1 liblz4-1_0.0~r131-2ubuntu2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-1 libmagic1_1:5.32-1 libmount1_2.30.1-0ubuntu4 libmpc3_1.0.3-2 libmpdec2_2.4.2-1 libmpfr4_3.1.6-1 libncurses5_6.0+20160625-1ubuntu1 libncursesw5_6.0+20160625-1ubuntu1 libnettle6_3.3-2 libnpth0_1.5-2 libp11-kit0_0.23.9-2 libpam-modules_1.1.8-3.2ubuntu3 libpam-modules-bin_1.1.8-3.2ubuntu3 libpam-runtime_1.1.8-3.2ubuntu3 libpam0g_1.1.8-3.2ubuntu3 libpcre3_2:8.39-5ubuntu3 libperl5.26_5.26.0-8ubuntu1 libphobos2-ldc-dev_1:1.4.0-3ubuntu1 libphobos2-ldc74_1:1.4.0-3ubuntu1 libpipeline1_1.4.2-1 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-1ubuntu2 libpsl5_0.18.0-2 libpython3-stdlib_3.6.3-0ubuntu2 libpython3.6-minimal_3.6.3-1ubuntu1 libpython3.6-stdlib_3.6.3-1ubuntu1 libreadline7_7.0-0ubuntu2 libroken18-heimdal_7.4.0.dfsg.1-2 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3ubuntu1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3ubuntu1 libseccomp2_2.3.1-2.1ubuntu3 libselinux1_2.7-1 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.11-1 libslang2_2.3.1-5ubuntu1 libsmartcols1_2.30.1-0ubuntu4 libsqlite3-0_3.20.1-2 libss2_1.43.5-1 libssl1.0.0_1.0.2g-1ubuntu13 libstdc++-7-dev_7.2.0-12ubuntu1 libstdc++6_7.2.0-12ubuntu1 libsystemd0_234-2ubuntu12 libtasn1-6_4.12-2.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1ubuntu1 libtool_2.4.6-2 libubsan0_7.2.0-12ubuntu1 libudev1_234-2ubuntu12 libundead-dev_1.0.7-1build1 libundead0_1.0.7-1build1 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-31 libustr-1.0-1_1.0.4-6 libuuid1_2.30.1-0ubuntu4 libwind0-heimdal_7.4.0.dfsg.1-2 libxml2_2.9.4+dfsg1-5ubuntu1 linux-libc-dev_4.13.0-16.19 lockfile-progs_0.1.17build1 login_1:4.2-3.2ubuntu4 lsb-base_9.20160110ubuntu5 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-2 mawk_1.3.3-17ubuntu2 meson_0.42.1-1 mime-support_3.60ubuntu1 mount_2.30.1-0ubuntu4 multiarch-support_2.26-0ubuntu2 ncurses-base_6.0+20160625-1ubuntu1 ncurses-bin_6.0+20160625-1ubuntu1 ninja-build_1.7.2-3 openssl_1.0.2g-1ubuntu13 optipng_0.7.6-1build1 passwd_1:4.2-3.2ubuntu4 patch_2.7.5-1build1 perl_5.26.0-8ubuntu1 perl-base_5.26.0-8ubuntu1 perl-modules-5.26_5.26.0-8ubuntu1 pinentry-curses_1.0.0-3 pkg-config_0.29.1-0ubuntu2 pkgbinarymangler_131 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-1ubuntu2 python3_3.6.3-0ubuntu2 python3-minimal_3.6.3-0ubuntu2 python3.6_3.6.3-1ubuntu1 python3.6-minimal_3.6.3-1ubuntu1 readline-common_7.0-0ubuntu2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libbiod-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.10 systemd_234-2ubuntu12 systemd-sysv_234-2ubuntu12 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu1 tar_1.29b-2 tzdata_2017c-1 ubuntu-keyring_2016.10.27 util-linux_2.30.1-0ubuntu4 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 zlib1g-dev_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Fri Sep 15 09:51:06 2017 UTC gpgv: using RSA key gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libbiod_0.1.0-4build1.dsc dpkg-source: info: extracting libbiod in libbiod-0.1.0 dpkg-source: info: unpacking libbiod_0.1.0.orig.tar.gz dpkg-source: info: unpacking libbiod_0.1.0-4build1.debian.tar.xz dpkg-source: info: applying 0002-improved-big-endian-support.patch dpkg-source: info: applying 0003-include-the-AH-header-tag-to-SQ-lines.patch dpkg-source: info: applying 0004-use-consistent-naming-21.patch dpkg-source: info: applying 0005-fixes-lomereiter-sambamba-244.patch dpkg-source: info: applying 0006-switch-to-undead.stream.patch dpkg-source: info: applying 0007-std.c-core.stdc.patch dpkg-source: info: applying 0008-fix-deprecations-and-some-warnings.patch dpkg-source: info: applying 0009-fix-toHash-signature.patch dpkg-source: info: applying 0011-better-.travis.yml-uses-dub-test-and-tests-ldc.patch dpkg-source: info: applying 0013-fix-toJSON-usage-for-new-and-old-compilers.patch dpkg-source: info: applying 0014-Add-compareCoordinatesAndStrand-to-fix-sorting-test-.patch dpkg-source: info: applying 0015-Add-Meson-build-definition.patch dpkg-source: info: applying 0016-fix-type-conversion.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-13629296 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-13629296 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-13629296 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package libbiod dpkg-buildpackage: info: source version 0.1.0-4build1 dpkg-buildpackage: info: source distribution artful dpkg-source --before-build libbiod-0.1.0 dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_auto_clean dh_autoreconf_clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a cd obj-arm-linux-gnueabihf && meson .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/arm-linux-gnueabihf --libexecdir=lib/arm-linux-gnueabihf The Meson build system Version: 0.42.1 Source dir: /<> Build dir: /<>/obj-arm-linux-gnueabihf Build type: native build Project name: BioD Native D compiler: ldc2 (llvm 1.4.0) Appending DFLAGS from environment: '-O -g -release' Appending LDFLAGS from environment: '-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now' Build machine cpu family: arm Build machine cpu: armv7l Found pkg-config: /usr/bin/pkg-config (0.29.1) Native dependency undead found: YES 1.0.7 Native dependency zlib found: YES 1.2.11 Build targets in project: 2 dh_auto_build -a cd obj-arm-linux-gnueabihf && ninja -j4 -v [1/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release 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-I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_thirdparty_msgpack.d.o' -c ../bio/bam/thirdparty/msgpack.d [8/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_iontorrent_flowindex.d.o' -c ../bio/bam/iontorrent/flowindex.d [9/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_reader.d.o' -c ../bio/bam/reader.d [10/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_utils_samheadermerger.d.o' -c ../bio/bam/utils/samheadermerger.d [11/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_splitter.d.o' -c ../bio/bam/splitter.d [12/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_bai_bin.d.o' -c ../bio/bam/bai/bin.d [13/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_abstractreader.d.o' -c ../bio/bam/abstractreader.d [14/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_iontorrent_flowcall.d.o' -c ../bio/bam/iontorrent/flowcall.d [15/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_bai_indexing.d.o' -c ../bio/bam/bai/indexing.d [16/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_md_core.d.o' -c ../bio/bam/md/core.d [17/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_reference.d.o' -c ../bio/bam/reference.d [18/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_md_operation.d.o' -c ../bio/bam/md/operation.d [19/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_md_reconstruct.d.o' -c ../bio/bam/md/reconstruct.d [20/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_md_parse.d.o' -c ../bio/bam/md/parse.d [21/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_validation_samheader.d.o' -c ../bio/bam/validation/samheader.d [22/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_region.d.o' -c ../bio/bam/region.d [23/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_tagvalue.d.o' -c ../bio/bam/tagvalue.d [24/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_referenceinfo.d.o' -c ../bio/bam/referenceinfo.d [25/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_constants.d.o' -c ../bio/bam/constants.d [26/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_validation_alignment.d.o' -c ../bio/bam/validation/alignment.d [27/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_randomaccessmanager.d.o' -c ../bio/bam/randomaccessmanager.d [28/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_snpcallers_simple.d.o' -c ../bio/bam/snpcallers/simple.d [29/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_snpcallers_maq.d.o' -c ../bio/bam/snpcallers/maq.d [30/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_writer.d.o' -c ../bio/bam/writer.d [31/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_baseinfo.d.o' -c ../bio/bam/baseinfo.d [32/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_maf_reader.d.o' -c ../bio/maf/reader.d [33/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_maf_block.d.o' -c ../bio/maf/block.d [34/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_utils_memoize.d.o' -c ../bio/core/utils/memoize.d [35/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_utils_algo.d.o' -c ../bio/core/utils/algo.d [36/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_multireader.d.o' -c ../bio/bam/multireader.d [37/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_utils_stream.d.o' -c ../bio/core/utils/stream.d [38/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_region.d.o' -c ../bio/bam/region.d [39/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_validation_samheader.d.o' -c ../bio/bam/validation/samheader.d [40/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_bam_read.d.o' -c ../bio/bam/read.d [41/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_utils_zlib.d.o' -c ../bio/core/utils/zlib.d [42/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_utils_roundbuf.d.o' -c ../bio/core/utils/roundbuf.d [43/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_maf_parser.d.o' -c ../bio/maf/parser.d [44/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_utils_format.d.o' -c ../bio/core/utils/format.d [45/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_utils_range.d.o' -c ../bio/core/utils/range.d [46/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_utils_switchendianness.d.o' -c ../bio/core/utils/switchendianness.d [47/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_utils_tmpfile.d.o' -c ../bio/core/utils/tmpfile.d [48/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_utils_bylinefast.d.o' -c ../bio/core/utils/bylinefast.d [49/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_genotype.d.o' -c ../bio/core/genotype.d [50/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_utils_outbuffer.d.o' -c ../bio/core/utils/outbuffer.d [51/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_base.d.o' -c ../bio/core/base.d [52/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_region.d.o' -c ../bio/core/region.d [53/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_kmer.d.o' -c ../bio/core/kmer.d [54/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_tinymap.d.o' -c ../bio/core/tinymap.d [55/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_sequence.d.o' -c ../bio/core/sequence.d [56/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_bgzf_chunk.d.o' -c ../bio/core/bgzf/chunk.d [57/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_bgzf_inputstream.d.o' -c ../bio/core/bgzf/inputstream.d [58/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_fasta.d.o' -c ../bio/core/fasta.d [59/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_bgzf_constants.d.o' -c ../bio/core/bgzf/constants.d [60/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_bgzf_outputstream.d.o' -c ../bio/core/bgzf/outputstream.d [61/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_bgzf_compress.d.o' -c ../bio/core/bgzf/compress.d [62/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_call.d.o' -c ../bio/core/call.d [63/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_sff_utils_roundup.d.o' -c ../bio/sff/utils/roundup.d [64/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_bgzf_block.d.o' -c ../bio/core/bgzf/block.d [65/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_sff_index.d.o' -c ../bio/sff/index.d [66/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_core_bgzf_virtualoffset.d.o' -c ../bio/core/bgzf/virtualoffset.d [67/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_sff_constants.d.o' -c ../bio/sff/constants.d [68/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_sff_read.d.o' -c ../bio/sff/read.d [69/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_sff_readrange.d.o' -c ../bio/sff/readrange.d [70/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_sff_writer.d.o' -c ../bio/sff/writer.d [71/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_sff_reader.d.o' -c ../bio/sff/reader.d [72/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_randomaccessmanager.d.o' -c ../bio/bam/randomaccessmanager.d [73/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_sam_reader.d.o' -c ../bio/sam/reader.d [74/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_sam_utils_recordparser.d.o' -c ../bio/sam/utils/recordparser.d [75/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_reference.d.o' -c ../bio/bam/reference.d [76/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_sam_utils_fastrecordparser.d.o' -c ../bio/sam/utils/fastrecordparser.d [77/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_md_core.d.o' -c ../bio/bam/md/core.d [78/149] ldc2 -Ibiod@sha -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -relocation-model=pic -of 'biod@sha/bio_sam_header.d.o' -c ../bio/sam/header.d [79/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_tagvalue.d.o' -c ../bio/bam/tagvalue.d [80/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_md_operation.d.o' -c ../bio/bam/md/operation.d [81/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_md_parse.d.o' -c ../bio/bam/md/parse.d [82/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_validation_alignment.d.o' -c ../bio/bam/validation/alignment.d [83/149] ldc2 -of libbiod.so.0.1.0 'biod@sha/bio_bam_utils_value.d.o' 'biod@sha/bio_bam_utils_samheadermerger.d.o' 'biod@sha/bio_bam_utils_array.d.o' 'biod@sha/bio_bam_utils_graph.d.o' 'biod@sha/bio_bam_pileup.d.o' 'biod@sha/bio_bam_readrange.d.o' 'biod@sha/bio_bam_reader.d.o' 'biod@sha/bio_bam_thirdparty_msgpack.d.o' 'biod@sha/bio_bam_baifile.d.o' 'biod@sha/bio_bam_iontorrent_flowcall.d.o' 'biod@sha/bio_bam_iontorrent_flowindex.d.o' 'biod@sha/bio_bam_splitter.d.o' 'biod@sha/bio_bam_abstractreader.d.o' 'biod@sha/bio_bam_bai_indexing.d.o' 'biod@sha/bio_bam_bai_bin.d.o' 'biod@sha/bio_bam_multireader.d.o' 'biod@sha/bio_bam_reference.d.o' 'biod@sha/bio_bam_md_operation.d.o' 'biod@sha/bio_bam_md_core.d.o' 'biod@sha/bio_bam_md_parse.d.o' 'biod@sha/bio_bam_md_reconstruct.d.o' 'biod@sha/bio_bam_tagvalue.d.o' 'biod@sha/bio_bam_validation_alignment.d.o' 'biod@sha/bio_bam_validation_samheader.d.o' 'biod@sha/bio_bam_region.d.o' 'biod@sha/bio_bam_randomaccessmanager.d.o' 'biod@sha/bio_bam_referenceinfo.d.o' 'biod@sha/bio_bam_constants.d.o' 'biod@sha/bio_bam_snpcallers_maq.d.o' 'biod@sha/bio_bam_snpcallers_simple.d.o' 'biod@sha/bio_bam_read.d.o' 'biod@sha/bio_bam_writer.d.o' 'biod@sha/bio_bam_baseinfo.d.o' 'biod@sha/bio_maf_reader.d.o' 'biod@sha/bio_maf_parser.d.o' 'biod@sha/bio_maf_block.d.o' 'biod@sha/bio_core_utils_memoize.d.o' 'biod@sha/bio_core_utils_algo.d.o' 'biod@sha/bio_core_utils_stream.d.o' 'biod@sha/bio_core_utils_zlib.d.o' 'biod@sha/bio_core_utils_tmpfile.d.o' 'biod@sha/bio_core_utils_roundbuf.d.o' 'biod@sha/bio_core_utils_format.d.o' 'biod@sha/bio_core_utils_bylinefast.d.o' 'biod@sha/bio_core_utils_range.d.o' 'biod@sha/bio_core_utils_switchendianness.d.o' 'biod@sha/bio_core_utils_outbuffer.d.o' 'biod@sha/bio_core_genotype.d.o' 'biod@sha/bio_core_fasta.d.o' 'biod@sha/bio_core_base.d.o' 'biod@sha/bio_core_kmer.d.o' 'biod@sha/bio_core_region.d.o' 'biod@sha/bio_core_tinymap.d.o' 'biod@sha/bio_core_sequence.d.o' 'biod@sha/bio_core_bgzf_outputstream.d.o' 'biod@sha/bio_core_bgzf_chunk.d.o' 'biod@sha/bio_core_bgzf_inputstream.d.o' 'biod@sha/bio_core_bgzf_constants.d.o' 'biod@sha/bio_core_bgzf_block.d.o' 'biod@sha/bio_core_bgzf_virtualoffset.d.o' 'biod@sha/bio_core_bgzf_compress.d.o' 'biod@sha/bio_core_call.d.o' 'biod@sha/bio_sff_utils_roundup.d.o' 'biod@sha/bio_sff_index.d.o' 'biod@sha/bio_sff_readrange.d.o' 'biod@sha/bio_sff_reader.d.o' 'biod@sha/bio_sff_constants.d.o' 'biod@sha/bio_sff_read.d.o' 'biod@sha/bio_sff_writer.d.o' 'biod@sha/bio_sam_utils_fastrecordparser.d.o' 'biod@sha/bio_sam_utils_recordparser.d.o' 'biod@sha/bio_sam_reader.d.o' 'biod@sha/bio_sam_header.d.o' -L-rpath=/<>/obj-arm-linux-gnueabihf/ -shared -relocation-model=pic -L-soname -Llibbiod.so.0 -O -g -release -L-Bsymbolic-functions -L-z -Lrelro -L-z -Lnow -L-lundead -L-lz [84/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_utils_array.d.o' -c ../bio/bam/utils/array.d [85/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_utils_graph.d.o' -c ../bio/bam/utils/graph.d [86/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_md_reconstruct.d.o' -c ../bio/bam/md/reconstruct.d [87/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_utils_value.d.o' -c ../bio/bam/utils/value.d [88/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_utils_samheadermerger.d.o' -c ../bio/bam/utils/samheadermerger.d [89/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_readrange.d.o' -c ../bio/bam/readrange.d [90/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_pileup.d.o' -c ../bio/bam/pileup.d [91/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_baifile.d.o' -c ../bio/bam/baifile.d [92/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_reader.d.o' -c ../bio/bam/reader.d [93/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_iontorrent_flowindex.d.o' -c ../bio/bam/iontorrent/flowindex.d [94/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_splitter.d.o' -c ../bio/bam/splitter.d [95/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_iontorrent_flowcall.d.o' -c ../bio/bam/iontorrent/flowcall.d [96/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_abstractreader.d.o' -c ../bio/bam/abstractreader.d [97/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_bai_bin.d.o' -c ../bio/bam/bai/bin.d [98/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_thirdparty_msgpack.d.o' -c ../bio/bam/thirdparty/msgpack.d [99/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/test_unittests.d.o' -c ../test/unittests.d [100/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_constants.d.o' -c ../bio/bam/constants.d [101/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_bai_indexing.d.o' -c ../bio/bam/bai/indexing.d [102/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_referenceinfo.d.o' -c ../bio/bam/referenceinfo.d [103/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_snpcallers_maq.d.o' -c ../bio/bam/snpcallers/maq.d [104/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_snpcallers_simple.d.o' -c ../bio/bam/snpcallers/simple.d [105/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_baseinfo.d.o' -c ../bio/bam/baseinfo.d [106/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_writer.d.o' -c ../bio/bam/writer.d [107/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_maf_reader.d.o' -c ../bio/maf/reader.d [108/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_maf_block.d.o' -c ../bio/maf/block.d [109/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_maf_parser.d.o' -c ../bio/maf/parser.d [110/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_utils_algo.d.o' -c ../bio/core/utils/algo.d [111/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_read.d.o' -c ../bio/bam/read.d [112/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_utils_zlib.d.o' -c ../bio/core/utils/zlib.d [113/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_utils_stream.d.o' -c ../bio/core/utils/stream.d [114/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_utils_roundbuf.d.o' -c ../bio/core/utils/roundbuf.d [115/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_utils_memoize.d.o' -c ../bio/core/utils/memoize.d [116/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_utils_format.d.o' -c ../bio/core/utils/format.d [117/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_utils_bylinefast.d.o' -c ../bio/core/utils/bylinefast.d [118/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_utils_switchendianness.d.o' -c ../bio/core/utils/switchendianness.d [119/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_utils_outbuffer.d.o' -c ../bio/core/utils/outbuffer.d [120/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_utils_tmpfile.d.o' -c ../bio/core/utils/tmpfile.d [121/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_genotype.d.o' -c ../bio/core/genotype.d [122/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_utils_range.d.o' -c ../bio/core/utils/range.d [123/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_base.d.o' -c ../bio/core/base.d [124/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_region.d.o' -c ../bio/core/region.d [125/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_kmer.d.o' -c ../bio/core/kmer.d [126/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_bam_multireader.d.o' -c ../bio/bam/multireader.d [127/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_sequence.d.o' -c ../bio/core/sequence.d [128/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_bgzf_chunk.d.o' -c ../bio/core/bgzf/chunk.d [129/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_fasta.d.o' -c ../bio/core/fasta.d [130/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_bgzf_constants.d.o' -c ../bio/core/bgzf/constants.d [131/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_bgzf_block.d.o' -c ../bio/core/bgzf/block.d [132/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_tinymap.d.o' -c ../bio/core/tinymap.d [133/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_bgzf_virtualoffset.d.o' -c ../bio/core/bgzf/virtualoffset.d [134/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_bgzf_inputstream.d.o' -c ../bio/core/bgzf/inputstream.d [135/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_sff_utils_roundup.d.o' -c ../bio/sff/utils/roundup.d [136/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_sff_index.d.o' -c ../bio/sff/index.d [137/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_bgzf_compress.d.o' -c ../bio/core/bgzf/compress.d [138/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_bgzf_outputstream.d.o' -c ../bio/core/bgzf/outputstream.d [139/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_sff_constants.d.o' -c ../bio/sff/constants.d [140/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_sff_read.d.o' -c ../bio/sff/read.d [141/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_core_call.d.o' -c ../bio/core/call.d [142/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_sff_readrange.d.o' -c ../bio/sff/readrange.d [143/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_sff_reader.d.o' -c ../bio/sff/reader.d [144/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_sff_writer.d.o' -c ../bio/sff/writer.d [145/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_sam_reader.d.o' -c ../bio/sam/reader.d [146/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_sam_utils_recordparser.d.o' -c ../bio/sam/utils/recordparser.d [147/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_sam_header.d.o' -c ../bio/sam/header.d [148/149] ldc2 -Ibiod_test@exe -I. -I.. -I -I../ -I/usr/include/d/ -enable-color -O -g -release -unittest -of 'biod_test@exe/bio_sam_utils_fastrecordparser.d.o' -c ../bio/sam/utils/fastrecordparser.d [149/149] ldc2 -of biod_test 'biod_test@exe/test_unittests.d.o' 'biod_test@exe/bio_bam_utils_value.d.o' 'biod_test@exe/bio_bam_utils_samheadermerger.d.o' 'biod_test@exe/bio_bam_utils_array.d.o' 'biod_test@exe/bio_bam_utils_graph.d.o' 'biod_test@exe/bio_bam_pileup.d.o' 'biod_test@exe/bio_bam_readrange.d.o' 'biod_test@exe/bio_bam_reader.d.o' 'biod_test@exe/bio_bam_thirdparty_msgpack.d.o' 'biod_test@exe/bio_bam_baifile.d.o' 'biod_test@exe/bio_bam_iontorrent_flowcall.d.o' 'biod_test@exe/bio_bam_iontorrent_flowindex.d.o' 'biod_test@exe/bio_bam_splitter.d.o' 'biod_test@exe/bio_bam_abstractreader.d.o' 'biod_test@exe/bio_bam_bai_indexing.d.o' 'biod_test@exe/bio_bam_bai_bin.d.o' 'biod_test@exe/bio_bam_multireader.d.o' 'biod_test@exe/bio_bam_reference.d.o' 'biod_test@exe/bio_bam_md_operation.d.o' 'biod_test@exe/bio_bam_md_core.d.o' 'biod_test@exe/bio_bam_md_parse.d.o' 'biod_test@exe/bio_bam_md_reconstruct.d.o' 'biod_test@exe/bio_bam_tagvalue.d.o' 'biod_test@exe/bio_bam_validation_alignment.d.o' 'biod_test@exe/bio_bam_validation_samheader.d.o' 'biod_test@exe/bio_bam_region.d.o' 'biod_test@exe/bio_bam_randomaccessmanager.d.o' 'biod_test@exe/bio_bam_referenceinfo.d.o' 'biod_test@exe/bio_bam_constants.d.o' 'biod_test@exe/bio_bam_snpcallers_maq.d.o' 'biod_test@exe/bio_bam_snpcallers_simple.d.o' 'biod_test@exe/bio_bam_read.d.o' 'biod_test@exe/bio_bam_writer.d.o' 'biod_test@exe/bio_bam_baseinfo.d.o' 'biod_test@exe/bio_maf_reader.d.o' 'biod_test@exe/bio_maf_parser.d.o' 'biod_test@exe/bio_maf_block.d.o' 'biod_test@exe/bio_core_utils_memoize.d.o' 'biod_test@exe/bio_core_utils_algo.d.o' 'biod_test@exe/bio_core_utils_stream.d.o' 'biod_test@exe/bio_core_utils_zlib.d.o' 'biod_test@exe/bio_core_utils_tmpfile.d.o' 'biod_test@exe/bio_core_utils_roundbuf.d.o' 'biod_test@exe/bio_core_utils_format.d.o' 'biod_test@exe/bio_core_utils_bylinefast.d.o' 'biod_test@exe/bio_core_utils_range.d.o' 'biod_test@exe/bio_core_utils_switchendianness.d.o' 'biod_test@exe/bio_core_utils_outbuffer.d.o' 'biod_test@exe/bio_core_genotype.d.o' 'biod_test@exe/bio_core_fasta.d.o' 'biod_test@exe/bio_core_base.d.o' 'biod_test@exe/bio_core_kmer.d.o' 'biod_test@exe/bio_core_region.d.o' 'biod_test@exe/bio_core_tinymap.d.o' 'biod_test@exe/bio_core_sequence.d.o' 'biod_test@exe/bio_core_bgzf_outputstream.d.o' 'biod_test@exe/bio_core_bgzf_chunk.d.o' 'biod_test@exe/bio_core_bgzf_inputstream.d.o' 'biod_test@exe/bio_core_bgzf_constants.d.o' 'biod_test@exe/bio_core_bgzf_block.d.o' 'biod_test@exe/bio_core_bgzf_virtualoffset.d.o' 'biod_test@exe/bio_core_bgzf_compress.d.o' 'biod_test@exe/bio_core_call.d.o' 'biod_test@exe/bio_sff_utils_roundup.d.o' 'biod_test@exe/bio_sff_index.d.o' 'biod_test@exe/bio_sff_readrange.d.o' 'biod_test@exe/bio_sff_reader.d.o' 'biod_test@exe/bio_sff_constants.d.o' 'biod_test@exe/bio_sff_read.d.o' 'biod_test@exe/bio_sff_writer.d.o' 'biod_test@exe/bio_sam_utils_fastrecordparser.d.o' 'biod_test@exe/bio_sam_utils_recordparser.d.o' 'biod_test@exe/bio_sam_reader.d.o' 'biod_test@exe/bio_sam_header.d.o' -O -g -release -L-Bsymbolic-functions -L-z -Lrelro -L-z -Lnow -L-lundead -L-lz dh_auto_test -a cd obj-arm-linux-gnueabihf && ninja test [0/1] Running all tests. 1/1 biod_tests FAIL 1.23 s OK: 0 FAIL: 1 SKIP: 0 TIMEOUT: 0 The output from the failed tests: 1/1 biod_tests FAIL 1.23 s --- command --- /<>/obj-arm-linux-gnueabihf/biod_test --- Listing only the last 100 lines from a long log. --- /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] 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/<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] /<>/obj-arm-linux-gnueabihf/biod_test(+0xc101c)[0xcb201c] ------- Full log written to /<>/obj-arm-linux-gnueabihf/meson-logs/testlog.txt FAILED: meson-test /usr/bin/python3 -u /usr/share/meson/meson test --no-rebuild --print-errorlogs ninja: build stopped: subcommand failed. dh_auto_test: cd obj-arm-linux-gnueabihf && ninja test returned exit code 1 debian/rules:8: recipe for target 'build-arch' failed make: *** [build-arch] Error 1 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 20171110-1307 Finished -------- E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build-Space: 159516 Build-Time: 304 Distribution: bionic Fail-Stage: build Host Architecture: armhf Install-Time: 65 Job: libbiod_0.1.0-4build1.dsc Machine Architecture: arm64 Package: libbiod Package-Time: 372 Source-Version: 0.1.0-4build1 Space: 159516 Status: attempted Version: 0.1.0-4build1 -------------------------------------------------------------------------------- Finished at 20171110-1307 Build needed 00:06:12, 159516k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=bionic --arch=armhf PACKAGEBUILD-13629296 Scanning for processes to kill in build PACKAGEBUILD-13629296 RUN: /usr/share/launchpad-buildd/slavebin/in-target umount-chroot --backend=chroot --series=bionic --arch=armhf PACKAGEBUILD-13629296 Stopping target for build PACKAGEBUILD-13629296 RUN: /usr/share/launchpad-buildd/slavebin/in-target remove-build --backend=chroot --series=bionic --arch=armhf PACKAGEBUILD-13629296 Removing build PACKAGEBUILD-13629296