https://launchpad.net/ubuntu/+source/libbpp-seq-omics/2.4.0-2/+build/14739639 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux bos02-s390x-007 4.4.0-119-generic #143-Ubuntu SMP Mon Apr 2 16:07:17 UTC 2018 s390x Buildd toolchain package versions: launchpad-buildd_160 python-lpbuildd_160 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.3 dpkg-dev_1.18.4ubuntu1.4 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 9 Apr 02:38:26 ntpdate[1745]: adjust time server 10.211.37.1 offset -0.000055 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=bionic --arch=s390x PACKAGEBUILD-14739639 /home/buildd/filecache-default/c63540de4962374dad549ddd7685c5c502845718 Creating target for build PACKAGEBUILD-14739639 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=bionic --arch=s390x PACKAGEBUILD-14739639 Starting target for build PACKAGEBUILD-14739639 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=bionic --arch=s390x PACKAGEBUILD-14739639 'deb http://ftpmaster.internal/ubuntu bionic main universe' 'deb http://ftpmaster.internal/ubuntu bionic-security main universe' 'deb http://ftpmaster.internal/ubuntu bionic-updates main universe' 'deb http://ftpmaster.internal/ubuntu bionic-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-14739639 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=bionic --arch=s390x PACKAGEBUILD-14739639 Updating target for build PACKAGEBUILD-14739639 Get:1 http://ftpmaster.internal/ubuntu bionic InRelease [235 kB] Get:2 http://ftpmaster.internal/ubuntu bionic-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu bionic-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu bionic-proposed InRelease [235 kB] Get:5 http://ftpmaster.internal/ubuntu bionic/main s390x Packages [945 kB] Get:6 http://ftpmaster.internal/ubuntu bionic/main Translation-en [515 kB] Get:7 http://ftpmaster.internal/ubuntu bionic/universe s390x Packages [8179 kB] Get:8 http://ftpmaster.internal/ubuntu bionic/universe Translation-en [4943 kB] Get:9 http://ftpmaster.internal/ubuntu bionic-proposed/main s390x Packages [9808 B] Get:10 http://ftpmaster.internal/ubuntu bionic-proposed/main Translation-en [8968 B] Get:11 http://ftpmaster.internal/ubuntu bionic-proposed/universe s390x Packages [52.8 kB] Get:12 http://ftpmaster.internal/ubuntu bionic-proposed/universe Translation-en [39.7 kB] Fetched 15.3 MB in 3s (3939 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: gnupg-agent libcurl3-gnutls libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libnghttp2-14 libpsl5 librtmp1 libssl1.0.0 libunistring0 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: dirmngr gcc-8-base gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpg-wks-server gpgconf gpgsm libargon2-0 libasan4 libcom-err2 libcryptsetup12 libext2fs2 libgdbm-compat4 libgdbm5 libisl19 libjson-c3 libmpfr6 libnghttp2-14 libssl1.1 libubsan0 libunistring2 The following packages will be upgraded: adduser advancecomp apt apt-transport-https base-files base-passwd bash binutils binutils-common binutils-s390x-linux-gnu bsdutils build-essential coreutils cpp cpp-7 dash debconf debianutils dmsetup dpkg dpkg-dev e2fslibs e2fsprogs fakeroot fdisk findutils g++ g++-7 gcc gcc-7 gcc-7-base gnupg gnupg-agent gpgv hostname init init-system-helpers libapparmor1 libapt-pkg5.0 libasn1-8-heimdal libassuan0 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcomerr2 libcurl3-gnutls libdevmapper1.02.1 libdpkg-perl libfakeroot libfdisk1 libffi6 libgcc-7-dev libgcc1 libgcrypt20 libgmp10 libgnutls30 libgomp1 libgpg-error0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libidn11 libidn2-0 libip4tc0 libisl15 libitm1 libk5crypto3 libkeyutils1 libkmod2 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblockfile-bin liblockfile1 liblz4-1 libmount1 libmpc3 libncurses5 libncursesw5 libnettle6 libnpth0 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre3 libperl5.26 libpng16-16 libprocps6 libpsl5 libreadline7 libroken18-heimdal libsasl2-2 libsasl2-modules-db libseccomp2 libselinux1 libsemanage-common libsemanage1 libslang2 libsmartcols1 libsqlite3-0 libss2 libssl1.0.0 libstdc++-7-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo5 libudev1 libuuid1 libwind0-heimdal linux-libc-dev login lsb-base mawk mount multiarch-support ncurses-base ncurses-bin openssl optipng passwd patch perl perl-base perl-modules-5.26 pinentry-curses pkgbinarymangler procps readline-common sed sensible-utils systemd systemd-sysv sysvinit-utils tzdata ubuntu-keyring util-linux 152 upgraded, 24 newly installed, 0 to remove and 0 not upgraded. Need to get 62.1 MB of archives. After this operation, 19.4 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu bionic/main s390x perl-modules-5.26 all 5.26.1-5 [2761 kB] Get:2 http://ftpmaster.internal/ubuntu bionic/main s390x libgdbm5 s390x 1.14.1-6 [25.6 kB] Get:3 http://ftpmaster.internal/ubuntu bionic/main s390x libgdbm-compat4 s390x 1.14.1-6 [6212 B] Get:4 http://ftpmaster.internal/ubuntu bionic/main s390x libperl5.26 s390x 5.26.1-5 [3372 kB] Get:5 http://ftpmaster.internal/ubuntu bionic/main s390x perl s390x 5.26.1-5 [202 kB] Get:6 http://ftpmaster.internal/ubuntu bionic/main s390x perl-base s390x 5.26.1-5 [1308 kB] Get:7 http://ftpmaster.internal/ubuntu bionic/main s390x libc6-dev s390x 2.27-0ubuntu3 [2036 kB] Get:8 http://ftpmaster.internal/ubuntu bionic/main s390x libc-dev-bin s390x 2.27-0ubuntu3 [62.1 kB] Get:9 http://ftpmaster.internal/ubuntu bionic-proposed/main s390x linux-libc-dev s390x 4.15.0-15.16 [1002 kB] Get:10 http://ftpmaster.internal/ubuntu bionic/main s390x libc6 s390x 2.27-0ubuntu3 [2339 kB] Get:11 http://ftpmaster.internal/ubuntu bionic/main s390x libc-bin s390x 2.27-0ubuntu3 [513 kB] Get:12 http://ftpmaster.internal/ubuntu bionic/main s390x gcc-8-base s390x 8-20180406-0ubuntu1 [18.1 kB] Get:13 http://ftpmaster.internal/ubuntu bionic/main s390x libgcc1 s390x 1:8-20180406-0ubuntu1 [25.1 kB] Get:14 http://ftpmaster.internal/ubuntu bionic/main s390x init-system-helpers all 1.51 [37.3 kB] Get:15 http://ftpmaster.internal/ubuntu bionic/main s390x base-files s390x 10ubuntu1 [55.9 kB] Get:16 http://ftpmaster.internal/ubuntu bionic/main s390x debianutils s390x 4.8.4 [85.2 kB] Get:17 http://ftpmaster.internal/ubuntu bionic/main s390x bash s390x 4.4.18-2ubuntu1 [583 kB] Get:18 http://ftpmaster.internal/ubuntu bionic/main s390x bsdutils s390x 1:2.31.1-0.4ubuntu3 [57.9 kB] Get:19 http://ftpmaster.internal/ubuntu bionic/main s390x coreutils s390x 8.28-1ubuntu1 [1218 kB] Get:20 http://ftpmaster.internal/ubuntu bionic/main s390x dpkg s390x 1.19.0.5ubuntu1 [1119 kB] Get:21 http://ftpmaster.internal/ubuntu bionic/main s390x dash s390x 0.5.8-2.10 [86.2 kB] Get:22 http://ftpmaster.internal/ubuntu bionic/main s390x libcom-err2 s390x 1.44.1-1 [9740 B] Get:23 http://ftpmaster.internal/ubuntu bionic/main s390x libcomerr2 s390x 1.44.1-1 [2696 B] Get:24 http://ftpmaster.internal/ubuntu bionic/main s390x libext2fs2 s390x 1.44.1-1 [154 kB] Get:25 http://ftpmaster.internal/ubuntu bionic/main s390x e2fslibs s390x 1.44.1-1 [2700 B] Get:26 http://ftpmaster.internal/ubuntu bionic/main s390x e2fsprogs s390x 1.44.1-1 [369 kB] Get:27 http://ftpmaster.internal/ubuntu bionic/main s390x findutils s390x 4.6.0+git+20170828-2 [287 kB] Get:28 http://ftpmaster.internal/ubuntu bionic/main s390x hostname s390x 3.20 [11.0 kB] Get:29 http://ftpmaster.internal/ubuntu bionic/main s390x login s390x 1:4.5-1ubuntu1 [304 kB] Get:30 http://ftpmaster.internal/ubuntu bionic/main s390x libncurses5 s390x 6.1-1ubuntu1 [89.1 kB] Get:31 http://ftpmaster.internal/ubuntu bionic/main s390x libtinfo5 s390x 6.1-1ubuntu1 [77.4 kB] Get:32 http://ftpmaster.internal/ubuntu bionic/main s390x ncurses-bin s390x 6.1-1ubuntu1 [159 kB] Get:33 http://ftpmaster.internal/ubuntu bionic/main s390x libncursesw5 s390x 6.1-1ubuntu1 [108 kB] Get:34 http://ftpmaster.internal/ubuntu bionic/main s390x sed s390x 4.4-2 [181 kB] Get:35 http://ftpmaster.internal/ubuntu bionic/main s390x libuuid1 s390x 2.31.1-0.4ubuntu3 [20.0 kB] Get:36 http://ftpmaster.internal/ubuntu bionic/main s390x libblkid1 s390x 2.31.1-0.4ubuntu3 [117 kB] Get:37 http://ftpmaster.internal/ubuntu bionic/main s390x libsmartcols1 s390x 2.31.1-0.4ubuntu3 [79.2 kB] Get:38 http://ftpmaster.internal/ubuntu bionic/main s390x libfdisk1 s390x 2.31.1-0.4ubuntu3 [152 kB] Get:39 http://ftpmaster.internal/ubuntu bionic/main s390x libpcre3 s390x 2:8.39-9 [154 kB] Get:40 http://ftpmaster.internal/ubuntu bionic/main s390x libselinux1 s390x 2.7-2build2 [63.9 kB] Get:41 http://ftpmaster.internal/ubuntu bionic/main s390x libmount1 s390x 2.31.1-0.4ubuntu3 [126 kB] Get:42 http://ftpmaster.internal/ubuntu bionic/main s390x fdisk s390x 2.31.1-0.4ubuntu3 [103 kB] Get:43 http://ftpmaster.internal/ubuntu bionic/main s390x util-linux s390x 2.31.1-0.4ubuntu3 [867 kB] Get:44 http://ftpmaster.internal/ubuntu bionic/main s390x base-passwd s390x 3.5.44 [46.2 kB] Get:45 http://ftpmaster.internal/ubuntu bionic/main s390x ncurses-base all 6.1-1ubuntu1 [17.3 kB] Get:46 http://ftpmaster.internal/ubuntu bionic/main s390x sysvinit-utils s390x 2.88dsf-59.10ubuntu1 [18.2 kB] Get:47 http://ftpmaster.internal/ubuntu bionic/main s390x liblz4-1 s390x 0.0~r131-2ubuntu3 [37.3 kB] Get:48 http://ftpmaster.internal/ubuntu bionic/main s390x libstdc++6 s390x 8-20180406-0ubuntu1 [397 kB] Get:49 http://ftpmaster.internal/ubuntu bionic/main s390x libudev1 s390x 237-3ubuntu7 [50.2 kB] Get:50 http://ftpmaster.internal/ubuntu bionic/main s390x libapt-pkg5.0 s390x 1.6~beta1 [742 kB] Get:51 http://ftpmaster.internal/ubuntu bionic/main s390x libaudit-common all 1:2.8.2-1ubuntu1 [4132 B] Get:52 http://ftpmaster.internal/ubuntu bionic/main s390x libcap-ng0 s390x 0.7.7-3.1 [10.7 kB] Get:53 http://ftpmaster.internal/ubuntu bionic/main s390x libaudit1 s390x 1:2.8.2-1ubuntu1 [37.0 kB] Get:54 http://ftpmaster.internal/ubuntu bionic/main s390x debconf all 1.5.66 [124 kB] Get:55 http://ftpmaster.internal/ubuntu bionic/main s390x libpam0g s390x 1.1.8-3.6ubuntu2 [52.8 kB] Get:56 http://ftpmaster.internal/ubuntu bionic/main s390x libsemanage-common all 2.7-2build2 [6904 B] Get:57 http://ftpmaster.internal/ubuntu bionic/main s390x libsemanage1 s390x 2.7-2build2 [78.1 kB] Get:58 http://ftpmaster.internal/ubuntu bionic/main s390x libpam-modules-bin s390x 1.1.8-3.6ubuntu2 [35.2 kB] Get:59 http://ftpmaster.internal/ubuntu bionic/main s390x libpam-modules s390x 1.1.8-3.6ubuntu2 [231 kB] Get:60 http://ftpmaster.internal/ubuntu bionic/main s390x passwd s390x 1:4.5-1ubuntu1 [798 kB] Get:61 http://ftpmaster.internal/ubuntu bionic/main s390x adduser all 3.116ubuntu1 [163 kB] Get:62 http://ftpmaster.internal/ubuntu bionic/main s390x libgpg-error0 s390x 1.27-6 [36.6 kB] Get:63 http://ftpmaster.internal/ubuntu bionic/main s390x libgcrypt20 s390x 1.8.1-4ubuntu1 [349 kB] Get:64 http://ftpmaster.internal/ubuntu bionic/main s390x gpgv s390x 2.2.4-1ubuntu1 [180 kB] Get:65 http://ftpmaster.internal/ubuntu bionic/main s390x ubuntu-keyring all 2018.02.28 [20.7 kB] Get:66 http://ftpmaster.internal/ubuntu bionic/main s390x libunistring2 s390x 0.9.9-0ubuntu1 [358 kB] Get:67 http://ftpmaster.internal/ubuntu bionic/main s390x libgmp10 s390x 2:6.1.2+dfsg-2 [225 kB] Get:68 http://ftpmaster.internal/ubuntu bionic/main s390x libnettle6 s390x 3.4-1 [120 kB] Get:69 http://ftpmaster.internal/ubuntu bionic/main s390x libhogweed4 s390x 3.4-1 [136 kB] Get:70 http://ftpmaster.internal/ubuntu bionic/main s390x libidn2-0 s390x 2.0.4-1.1build2 [47.0 kB] Get:71 http://ftpmaster.internal/ubuntu bionic/main s390x libffi6 s390x 3.2.1-8 [16.5 kB] Get:72 http://ftpmaster.internal/ubuntu bionic/main s390x libp11-kit0 s390x 0.23.9-2 [188 kB] Get:73 http://ftpmaster.internal/ubuntu bionic/main s390x libtasn1-6 s390x 4.13-2 [34.2 kB] Get:74 http://ftpmaster.internal/ubuntu bionic/main s390x libgnutls30 s390x 3.5.18-1ubuntu1 [556 kB] Get:75 http://ftpmaster.internal/ubuntu bionic/main s390x libseccomp2 s390x 2.3.1-2.1ubuntu4 [41.1 kB] Get:76 http://ftpmaster.internal/ubuntu bionic/main s390x apt s390x 1.6~beta1 [1118 kB] Get:77 http://ftpmaster.internal/ubuntu bionic/main s390x libargon2-0 s390x 0~20161029-1.1 [35.5 kB] Get:78 http://ftpmaster.internal/ubuntu bionic/main s390x libjson-c3 s390x 0.12.1-1.3 [20.8 kB] Get:79 http://ftpmaster.internal/ubuntu bionic/main s390x libdevmapper1.02.1 s390x 2:1.02.145-4.1ubuntu2 [122 kB] Get:80 http://ftpmaster.internal/ubuntu bionic/main s390x libcryptsetup12 s390x 2:2.0.2-1ubuntu1 [120 kB] Get:81 http://ftpmaster.internal/ubuntu bionic/main s390x libapparmor1 s390x 2.12-4ubuntu4 [31.0 kB] Get:82 http://ftpmaster.internal/ubuntu bionic/main s390x libcap2 s390x 1:2.25-1.2 [13.2 kB] Get:83 http://ftpmaster.internal/ubuntu bionic/main s390x libidn11 s390x 1.33-2.1ubuntu1 [44.4 kB] Get:84 http://ftpmaster.internal/ubuntu bionic/main s390x libip4tc0 s390x 1.6.1-2ubuntu2 [19.3 kB] Get:85 http://ftpmaster.internal/ubuntu bionic/main s390x libkmod2 s390x 24-1ubuntu3 [36.9 kB] Get:86 http://ftpmaster.internal/ubuntu bionic/main s390x mount s390x 2.31.1-0.4ubuntu3 [103 kB] Get:87 http://ftpmaster.internal/ubuntu bionic/main s390x libprocps6 s390x 2:3.3.12-3ubuntu1 [30.0 kB] Get:88 http://ftpmaster.internal/ubuntu bionic/main s390x lsb-base all 9.20170808ubuntu1 [12.5 kB] Get:89 http://ftpmaster.internal/ubuntu bionic/main s390x procps s390x 2:3.3.12-3ubuntu1 [215 kB] Get:90 http://ftpmaster.internal/ubuntu bionic/main s390x systemd s390x 237-3ubuntu7 [2615 kB] Get:91 http://ftpmaster.internal/ubuntu bionic/main s390x libsystemd0 s390x 237-3ubuntu7 [187 kB] Get:92 http://ftpmaster.internal/ubuntu bionic/main s390x mawk s390x 1.3.3-17ubuntu3 [78.8 kB] Get:93 http://ftpmaster.internal/ubuntu bionic/main s390x init s390x 1.51 [5864 B] Get:94 http://ftpmaster.internal/ubuntu bionic/main s390x systemd-sysv s390x 237-3ubuntu7 [11.7 kB] Get:95 http://ftpmaster.internal/ubuntu bionic/main s390x libpam-runtime all 1.1.8-3.6ubuntu2 [37.0 kB] Get:96 http://ftpmaster.internal/ubuntu bionic/main s390x libss2 s390x 1.44.1-1 [10.7 kB] Get:97 http://ftpmaster.internal/ubuntu bionic/main s390x sensible-utils all 0.0.12 [14.8 kB] Get:98 http://ftpmaster.internal/ubuntu bionic/main s390x dmsetup s390x 2:1.02.145-4.1ubuntu2 [73.0 kB] Get:99 http://ftpmaster.internal/ubuntu bionic/main s390x readline-common all 7.0-3 [52.9 kB] Get:100 http://ftpmaster.internal/ubuntu bionic/main s390x libreadline7 s390x 7.0-3 [117 kB] Get:101 http://ftpmaster.internal/ubuntu bionic/main s390x libslang2 s390x 2.3.1a-3ubuntu1 [415 kB] Get:102 http://ftpmaster.internal/ubuntu bionic/main s390x libsqlite3-0 s390x 3.22.0-1 [463 kB] Get:103 http://ftpmaster.internal/ubuntu bionic/main s390x libssl1.1 s390x 1.1.0g-2ubuntu3 [811 kB] Get:104 http://ftpmaster.internal/ubuntu bionic/main s390x openssl s390x 1.1.0g-2ubuntu3 [519 kB] Get:105 http://ftpmaster.internal/ubuntu bionic/main s390x tzdata all 2018d-1 [188 kB] Get:106 http://ftpmaster.internal/ubuntu bionic/main s390x libgssapi-krb5-2 s390x 1.16-2build1 [110 kB] Get:107 http://ftpmaster.internal/ubuntu bionic/main s390x libkrb5-3 s390x 1.16-2build1 [261 kB] Get:108 http://ftpmaster.internal/ubuntu bionic/main s390x libk5crypto3 s390x 1.16-2build1 [84.1 kB] Get:109 http://ftpmaster.internal/ubuntu bionic/main s390x libkrb5support0 s390x 1.16-2build1 [30.4 kB] Get:110 http://ftpmaster.internal/ubuntu bionic/main s390x libkeyutils1 s390x 1.5.9-9.2ubuntu1 [9092 B] Get:111 http://ftpmaster.internal/ubuntu bionic/main s390x libpng16-16 s390x 1.6.34-1 [171 kB] Get:112 http://ftpmaster.internal/ubuntu bionic/main s390x libpsl5 s390x 0.19.1-5build1 [41.5 kB] Get:113 http://ftpmaster.internal/ubuntu bionic/main s390x libssl1.0.0 s390x 1.0.2n-1ubuntu5 [777 kB] Get:114 http://ftpmaster.internal/ubuntu bionic/main s390x multiarch-support s390x 2.27-0ubuntu3 [6920 B] Get:115 http://ftpmaster.internal/ubuntu bionic/main s390x advancecomp s390x 2.1-1 [182 kB] Get:116 http://ftpmaster.internal/ubuntu bionic/universe s390x apt-transport-https all 1.6~beta1 [1692 B] Get:117 http://ftpmaster.internal/ubuntu bionic/main s390x libbinutils s390x 2.30-14ubuntu2 [306 kB] Get:118 http://ftpmaster.internal/ubuntu bionic/main s390x binutils s390x 2.30-14ubuntu2 [3324 B] Get:119 http://ftpmaster.internal/ubuntu bionic/main s390x binutils-common s390x 2.30-14ubuntu2 [193 kB] Get:120 http://ftpmaster.internal/ubuntu bionic/main s390x binutils-s390x-linux-gnu s390x 2.30-14ubuntu2 [1722 kB] Get:121 http://ftpmaster.internal/ubuntu bionic/main s390x libgomp1 s390x 8-20180406-0ubuntu1 [69.8 kB] Get:122 http://ftpmaster.internal/ubuntu bionic/main s390x libitm1 s390x 8-20180406-0ubuntu1 [26.9 kB] Get:123 http://ftpmaster.internal/ubuntu bionic/main s390x libatomic1 s390x 8-20180406-0ubuntu1 [8432 B] Get:124 http://ftpmaster.internal/ubuntu bionic/main s390x libasan4 s390x 7.3.0-15ubuntu2 [318 kB] Get:125 http://ftpmaster.internal/ubuntu bionic/main s390x libubsan0 s390x 7.3.0-15ubuntu2 [120 kB] Get:126 http://ftpmaster.internal/ubuntu bionic/main s390x g++-7 s390x 7.3.0-15ubuntu2 [5988 kB] Get:127 http://ftpmaster.internal/ubuntu bionic/main s390x gcc-7 s390x 7.3.0-15ubuntu2 [5883 kB] Get:128 http://ftpmaster.internal/ubuntu bionic/main s390x libstdc++-7-dev s390x 7.3.0-15ubuntu2 [1430 kB] Get:129 http://ftpmaster.internal/ubuntu bionic/main s390x libgcc-7-dev s390x 7.3.0-15ubuntu2 [644 kB] Get:130 http://ftpmaster.internal/ubuntu bionic/main s390x libcc1-0 s390x 8-20180406-0ubuntu1 [37.2 kB] Get:131 http://ftpmaster.internal/ubuntu bionic/main s390x cpp-7 s390x 7.3.0-15ubuntu2 [5182 kB] Get:132 http://ftpmaster.internal/ubuntu bionic/main s390x gcc-7-base s390x 7.3.0-15ubuntu2 [18.9 kB] Get:133 http://ftpmaster.internal/ubuntu bionic/main s390x libisl19 s390x 0.19-1 [512 kB] Get:134 http://ftpmaster.internal/ubuntu bionic/main s390x libmpc3 s390x 1.1.0-1 [38.3 kB] Get:135 http://ftpmaster.internal/ubuntu bionic/main s390x libmpfr6 s390x 4.0.1-1 [230 kB] Get:136 http://ftpmaster.internal/ubuntu bionic/main s390x cpp s390x 4:7.3.0-3ubuntu2 [27.5 kB] Get:137 http://ftpmaster.internal/ubuntu bionic/main s390x gcc s390x 4:7.3.0-3ubuntu2 [5188 B] Get:138 http://ftpmaster.internal/ubuntu bionic/main s390x g++ s390x 4:7.3.0-3ubuntu2 [1576 B] Get:139 http://ftpmaster.internal/ubuntu bionic/main s390x dpkg-dev all 1.19.0.5ubuntu1 [607 kB] Get:140 http://ftpmaster.internal/ubuntu bionic/main s390x libdpkg-perl all 1.19.0.5ubuntu1 [211 kB] Get:141 http://ftpmaster.internal/ubuntu bionic/main s390x patch s390x 2.7.6-1 [102 kB] Get:142 http://ftpmaster.internal/ubuntu bionic/main s390x build-essential s390x 12.4ubuntu1 [4754 B] Get:143 http://ftpmaster.internal/ubuntu bionic/main s390x gnupg-l10n all 2.2.4-1ubuntu1 [48.6 kB] Get:144 http://ftpmaster.internal/ubuntu bionic/main s390x libassuan0 s390x 2.5.1-2 [32.1 kB] Get:145 http://ftpmaster.internal/ubuntu bionic/main s390x gnupg s390x 2.2.4-1ubuntu1 [249 kB] Get:146 http://ftpmaster.internal/ubuntu bionic/universe s390x gnupg-agent all 2.2.4-1ubuntu1 [4544 B] Get:147 http://ftpmaster.internal/ubuntu bionic/main s390x gpgconf s390x 2.2.4-1ubuntu1 [115 kB] Get:148 http://ftpmaster.internal/ubuntu bionic/main s390x pinentry-curses s390x 1.1.0-1 [34.4 kB] Get:149 http://ftpmaster.internal/ubuntu bionic/main s390x libnpth0 s390x 1.5-3 [7512 B] Get:150 http://ftpmaster.internal/ubuntu bionic/main s390x gpg-agent s390x 2.2.4-1ubuntu1 [208 kB] Get:151 http://ftpmaster.internal/ubuntu bionic/main s390x gnupg-utils s390x 2.2.4-1ubuntu1 [117 kB] Get:152 http://ftpmaster.internal/ubuntu bionic/main s390x gpg s390x 2.2.4-1ubuntu1 [425 kB] Get:153 http://ftpmaster.internal/ubuntu bionic/main s390x gpg-wks-client s390x 2.2.4-1ubuntu1 [86.0 kB] Get:154 http://ftpmaster.internal/ubuntu bionic/main s390x gpg-wks-server s390x 2.2.4-1ubuntu1 [79.7 kB] Get:155 http://ftpmaster.internal/ubuntu bionic/main s390x gpgsm s390x 2.2.4-1ubuntu1 [197 kB] Get:156 http://ftpmaster.internal/ubuntu bionic/main s390x dirmngr s390x 2.2.4-1ubuntu1 [296 kB] Get:157 http://ftpmaster.internal/ubuntu bionic/main s390x libfakeroot s390x 1.22-2ubuntu1 [24.4 kB] Get:158 http://ftpmaster.internal/ubuntu bionic/main s390x fakeroot s390x 1.22-2ubuntu1 [60.9 kB] Get:159 http://ftpmaster.internal/ubuntu bionic/main s390x libroken18-heimdal s390x 7.5.0+dfsg-1 [39.4 kB] Get:160 http://ftpmaster.internal/ubuntu bionic/main s390x libasn1-8-heimdal s390x 7.5.0+dfsg-1 [147 kB] Get:161 http://ftpmaster.internal/ubuntu bionic/main s390x libnghttp2-14 s390x 1.30.0-1 [74.0 kB] Get:162 http://ftpmaster.internal/ubuntu bionic/main s390x libcurl3-gnutls s390x 7.58.0-2ubuntu3 [195 kB] Get:163 http://ftpmaster.internal/ubuntu bionic/main s390x libheimbase1-heimdal s390x 7.5.0+dfsg-1 [27.5 kB] Get:164 http://ftpmaster.internal/ubuntu bionic/main s390x libhcrypto4-heimdal s390x 7.5.0+dfsg-1 [82.4 kB] Get:165 http://ftpmaster.internal/ubuntu bionic/main s390x libwind0-heimdal s390x 7.5.0+dfsg-1 [47.7 kB] Get:166 http://ftpmaster.internal/ubuntu bionic/main s390x libhx509-5-heimdal s390x 7.5.0+dfsg-1 [98.3 kB] Get:167 http://ftpmaster.internal/ubuntu bionic/main s390x libkrb5-26-heimdal s390x 7.5.0+dfsg-1 [190 kB] Get:168 http://ftpmaster.internal/ubuntu bionic/main s390x libheimntlm0-heimdal s390x 7.5.0+dfsg-1 [14.1 kB] Get:169 http://ftpmaster.internal/ubuntu bionic/main s390x libgssapi3-heimdal s390x 7.5.0+dfsg-1 [86.9 kB] Get:170 http://ftpmaster.internal/ubuntu bionic/universe s390x libisl15 s390x 0.18-4 [509 kB] Get:171 http://ftpmaster.internal/ubuntu bionic/main s390x liblockfile-bin s390x 1.14-1.1 [11.8 kB] Get:172 http://ftpmaster.internal/ubuntu bionic/main s390x liblockfile1 s390x 1.14-1.1 [6532 B] Get:173 http://ftpmaster.internal/ubuntu bionic/main s390x libsasl2-modules-db s390x 2.1.27~101-g0780600+dfsg-3ubuntu2 [13.9 kB] Get:174 http://ftpmaster.internal/ubuntu bionic/main s390x libsasl2-2 s390x 2.1.27~101-g0780600+dfsg-3ubuntu2 [46.5 kB] Get:175 http://ftpmaster.internal/ubuntu bionic/main s390x optipng s390x 0.7.6-1.1 [82.0 kB] Get:176 http://ftpmaster.internal/ubuntu bionic/main s390x pkgbinarymangler all 135 [51.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 62.1 MB in 0s (71.0 MB/s) (Reading database ... 12436 files and directories currently installed.) 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Setting up gpg (2.2.4-1ubuntu1) ... Setting up cpp (4:7.3.0-3ubuntu2) ... Setting up gcc-7 (7.3.0-15ubuntu2) ... Setting up g++-7 (7.3.0-15ubuntu2) ... Setting up gpg-agent (2.2.4-1ubuntu1) ... Installing new version of config file /etc/X11/Xsession.d/90gpg-agent ... Setting up gcc (4:7.3.0-3ubuntu2) ... Setting up gpg-wks-server (2.2.4-1ubuntu1) ... Setting up gpg-wks-client (2.2.4-1ubuntu1) ... Setting up libgssapi-krb5-2:s390x (1.16-2build1) ... Setting up perl (5.26.1-5) ... Setting up g++ (4:7.3.0-3ubuntu2) ... Setting up gnupg-agent (2.2.4-1ubuntu1) ... Setting up libgssapi3-heimdal:s390x (7.5.0+dfsg-1) ... Setting up libcurl3-gnutls:s390x (7.58.0-2ubuntu3) ... Setting up gnupg (2.2.4-1ubuntu1) ... Setting up libdpkg-perl (1.19.0.5ubuntu1) ... Setting up dpkg-dev (1.19.0.5ubuntu1) ... Setting up build-essential (12.4ubuntu1) ... Processing triggers for libc-bin (2.27-0ubuntu3) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-14739639 s390x bionic-proposed -c chroot:build-PACKAGEBUILD-14739639 --arch=s390x --dist=bionic-proposed --nolog libbpp-seq-omics_2.4.0-2.dsc Initiating build PACKAGEBUILD-14739639 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-119-generic #143-Ubuntu SMP Mon Apr 2 16:07:17 UTC 2018 s390x sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-s390x-007.buildd +==============================================================================+ | libbpp-seq-omics 2.4.0-2 (s390x) 09 Apr 2018 02:38 | +==============================================================================+ Package: libbpp-seq-omics Version: 2.4.0-2 Source Version: 2.4.0-2 Distribution: bionic-proposed Machine Architecture: s390x Host Architecture: s390x Build Architecture: s390x I: NOTICE: Log filtering will replace 'build/libbpp-seq-omics-pSgnho/libbpp-seq-omics-2.4.0' with '<>' I: NOTICE: Log filtering will replace 'build/libbpp-seq-omics-pSgnho' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-14739639/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- libbpp-seq-omics_2.4.0-2.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-cKsbey/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-cKsbey/apt_archive ./ InRelease Get:2 copy:/<>/resolver-cKsbey/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-cKsbey/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-cKsbey/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-cKsbey/apt_archive ./ Packages [528 B] Fetched 2861 B in 0s (185 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: gnupg-agent libcurl3-gnutls libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libnghttp2-14 libpsl5 librtmp1 libssl1.0.0 libunistring0 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-cKsbey/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12735 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 11~), cmake, d-shlibs (>= 0.82), libbpp-seq-dev (>= 2.4.0) Filtered Build-Depends: debhelper (>= 11~), cmake, d-shlibs (>= 0.82), libbpp-seq-dev (>= 2.4.0) dpkg-deb: building package 'sbuild-build-depends-libbpp-seq-omics-dummy' in '/<>/resolver-X9b7ZQ/apt_archive/sbuild-build-depends-libbpp-seq-omics-dummy.deb'. Ign:1 copy:/<>/resolver-X9b7ZQ/apt_archive ./ InRelease Get:2 copy:/<>/resolver-X9b7ZQ/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-X9b7ZQ/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-X9b7ZQ/apt_archive ./ Sources [247 B] Get:5 copy:/<>/resolver-X9b7ZQ/apt_archive ./ Packages [565 B] Fetched 2931 B in 0s (153 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install libbpp-seq-omics build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: gnupg-agent libcurl3-gnutls libunistring0 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libbpp-core-dev libbpp-core4 libbpp-seq-dev libbpp-seq12 libbsd0 libcroco3 libcurl4 libexpat1 libfile-stripnondeterminism-perl libglib2.0-0 libicu60 libjsoncpp1 liblzo2-2 libmagic-mgc libmagic1 libpipeline1 librhash0 libsigsegv2 libtimedate-perl libtool libuv1 libxml2 m4 man-db po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following packages will be REMOVED: pkg-create-dbgsym* The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libbpp-core-dev libbpp-core4 libbpp-seq-dev libbpp-seq12 libbsd0 libcroco3 libcurl4 libexpat1 libfile-stripnondeterminism-perl libglib2.0-0 libicu60 libjsoncpp1 liblzo2-2 libmagic-mgc libmagic1 libpipeline1 librhash0 libsigsegv2 libtimedate-perl libtool libuv1 libxml2 m4 man-db po-debconf sbuild-build-depends-libbpp-seq-omics-dummy 0 upgraded, 44 newly installed, 1 to remove and 0 not upgraded. Need to get 23.6 MB of archives. After this operation, 112 MB of additional disk space will be used. Get:1 copy:/<>/resolver-X9b7ZQ/apt_archive ./ sbuild-build-depends-libbpp-seq-omics-dummy 0.invalid.0 [892 B] Get:2 http://ftpmaster.internal/ubuntu bionic/main s390x libbsd0 s390x 0.8.7-1 [40.0 kB] Get:3 http://ftpmaster.internal/ubuntu bionic/main s390x bsdmainutils s390x 11.1.2ubuntu1 [181 kB] Get:4 http://ftpmaster.internal/ubuntu bionic/main s390x groff-base s390x 1.22.3-10 [1174 kB] Get:5 http://ftpmaster.internal/ubuntu bionic/main s390x libpipeline1 s390x 1.5.0-1 [24.1 kB] Get:6 http://ftpmaster.internal/ubuntu bionic/main s390x man-db s390x 2.8.3-2 [1007 kB] Get:7 http://ftpmaster.internal/ubuntu bionic/main s390x libmagic-mgc s390x 1:5.32-2 [185 kB] Get:8 http://ftpmaster.internal/ubuntu bionic/main s390x libmagic1 s390x 1:5.32-2 [66.9 kB] Get:9 http://ftpmaster.internal/ubuntu bionic/main s390x file s390x 1:5.32-2 [21.9 kB] Get:10 http://ftpmaster.internal/ubuntu bionic/main s390x libexpat1 s390x 2.2.5-3 [79.3 kB] Get:11 http://ftpmaster.internal/ubuntu bionic/main s390x libglib2.0-0 s390x 2.56.0-4ubuntu1 [1076 kB] Get:12 http://ftpmaster.internal/ubuntu bionic/main s390x libicu60 s390x 60.2-3ubuntu3 [7837 kB] Get:13 http://ftpmaster.internal/ubuntu bionic/main s390x libxml2 s390x 2.9.4+dfsg1-6.1ubuntu1 [587 kB] Get:14 http://ftpmaster.internal/ubuntu bionic/main s390x gettext-base s390x 0.19.8.1-6 [48.3 kB] Get:15 http://ftpmaster.internal/ubuntu bionic/main s390x libsigsegv2 s390x 2.12-1 [14.6 kB] Get:16 http://ftpmaster.internal/ubuntu bionic/main s390x m4 s390x 1.4.18-1 [195 kB] Get:17 http://ftpmaster.internal/ubuntu bionic/main s390x autoconf all 2.69-11 [322 kB] Get:18 http://ftpmaster.internal/ubuntu bionic/main s390x autotools-dev all 20180224.1 [39.6 kB] Get:19 http://ftpmaster.internal/ubuntu bionic/main s390x automake all 1:1.15.1-3ubuntu2 [509 kB] Get:20 http://ftpmaster.internal/ubuntu bionic/main s390x autopoint all 0.19.8.1-6 [412 kB] Get:21 http://ftpmaster.internal/ubuntu bionic/main s390x cmake-data all 3.10.2-1ubuntu1 [1331 kB] Get:22 http://ftpmaster.internal/ubuntu bionic/main s390x liblzo2-2 s390x 2.08-1.2 [44.6 kB] Get:23 http://ftpmaster.internal/ubuntu bionic/main s390x libarchive13 s390x 3.2.2-3.1 [269 kB] Get:24 http://ftpmaster.internal/ubuntu bionic/main s390x libcurl4 s390x 7.58.0-2ubuntu3 [196 kB] Get:25 http://ftpmaster.internal/ubuntu bionic/main s390x libjsoncpp1 s390x 1.7.4-3 [70.8 kB] Get:26 http://ftpmaster.internal/ubuntu bionic/main s390x librhash0 s390x 1.3.6-2 [77.1 kB] Get:27 http://ftpmaster.internal/ubuntu bionic/main s390x libuv1 s390x 1.18.0-3 [60.4 kB] Get:28 http://ftpmaster.internal/ubuntu bionic/main s390x cmake s390x 3.10.2-1ubuntu1 [2791 kB] Get:29 http://ftpmaster.internal/ubuntu bionic/universe s390x d-shlibs all 0.82 [9880 B] Get:30 http://ftpmaster.internal/ubuntu bionic/main s390x libtool all 2.4.6-2 [194 kB] Get:31 http://ftpmaster.internal/ubuntu bionic/main s390x dh-autoreconf all 17 [15.8 kB] Get:32 http://ftpmaster.internal/ubuntu bionic/main s390x libarchive-zip-perl all 1.60-1 [83.9 kB] Get:33 http://ftpmaster.internal/ubuntu bionic/main s390x libfile-stripnondeterminism-perl all 0.040-1.1~build1 [13.8 kB] Get:34 http://ftpmaster.internal/ubuntu bionic/main s390x libtimedate-perl all 2.3000-2 [37.5 kB] Get:35 http://ftpmaster.internal/ubuntu bionic/main s390x dh-strip-nondeterminism all 0.040-1.1~build1 [5208 B] Get:36 http://ftpmaster.internal/ubuntu bionic/main s390x libcroco3 s390x 0.6.12-2 [74.2 kB] Get:37 http://ftpmaster.internal/ubuntu bionic/main s390x gettext s390x 0.19.8.1-6 [858 kB] Get:38 http://ftpmaster.internal/ubuntu bionic/main s390x intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:39 http://ftpmaster.internal/ubuntu bionic/main s390x po-debconf all 1.0.20 [232 kB] Get:40 http://ftpmaster.internal/ubuntu bionic/main s390x debhelper all 11.1.6ubuntu1 [902 kB] Get:41 http://ftpmaster.internal/ubuntu bionic-proposed/universe s390x libbpp-core4 s390x 2.4.0-3 [536 kB] Get:42 http://ftpmaster.internal/ubuntu bionic-proposed/universe s390x libbpp-core-dev s390x 2.4.0-3 [870 kB] Get:43 http://ftpmaster.internal/ubuntu bionic-proposed/universe s390x libbpp-seq12 s390x 2.4.0-2 [437 kB] Get:44 http://ftpmaster.internal/ubuntu bionic-proposed/universe s390x libbpp-seq-dev s390x 2.4.0-2 [661 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 23.6 MB in 0s (63.7 MB/s) (Reading database ... 12735 files and directories currently installed.) Removing pkg-create-dbgsym (0.73) ... Selecting previously unselected package libbsd0:s390x. (Reading database ... 12726 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.8.7-1_s390x.deb ... Unpacking libbsd0:s390x (0.8.7-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2ubuntu1_s390x.deb ... Unpacking bsdmainutils (11.1.2ubuntu1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.3-10_s390x.deb ... Unpacking groff-base (1.22.3-10) ... Selecting previously unselected package libpipeline1:s390x. Preparing to unpack .../03-libpipeline1_1.5.0-1_s390x.deb ... Unpacking libpipeline1:s390x (1.5.0-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.8.3-2_s390x.deb ... Unpacking man-db (2.8.3-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../05-libmagic-mgc_1%3a5.32-2_s390x.deb ... 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Setting up libbpp-core4:s390x (2.4.0-3) ... Setting up libbsd0:s390x (0.8.7-1) ... Setting up libxml2:s390x (2.9.4+dfsg1-6.1ubuntu1) ... Setting up libmagic-mgc (1:5.32-2) ... Setting up libmagic1:s390x (1:5.32-2) ... Setting up librhash0:s390x (1.3.6-2) ... Setting up libcroco3:s390x (0.6.12-2) ... Processing triggers for libc-bin (2.27-0ubuntu3) ... Setting up autotools-dev (20180224.1) ... Setting up libbpp-seq12:s390x (2.4.0-2) ... Setting up bsdmainutils (11.1.2ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autopoint (0.19.8.1-6) ... Setting up liblzo2-2:s390x (2.08-1.2) ... Setting up libfile-stripnondeterminism-perl (0.040-1.1~build1) ... Setting up libjsoncpp1:s390x (1.7.4-3) ... Setting up gettext (0.19.8.1-6) ... Setting up libarchive13:s390x (3.2.2-3.1) ... Setting up libbpp-core-dev (2.4.0-3) ... Setting up autoconf (2.69-11) ... Setting up file (1:5.32-2) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.15.1-3ubuntu2) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.8.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up cmake (3.10.2-1ubuntu1) ... Setting up libtool (2.4.6-2) ... Setting up libbpp-seq-dev (2.4.0-2) ... Setting up po-debconf (1.0.20) ... Setting up dh-autoreconf (17) ... Setting up dh-strip-nondeterminism (0.040-1.1~build1) ... Setting up debhelper (11.1.6ubuntu1) ... Setting up sbuild-build-depends-libbpp-seq-omics-dummy (0.invalid.0) ... (Reading database ... 17358 files and directories currently installed.) Purging configuration files for pkg-create-dbgsym (0.73) ... Processing triggers for libc-bin (2.27-0ubuntu3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-119-generic s390x (s390x) Toolchain package versions: binutils_2.30-14ubuntu2 dpkg-dev_1.19.0.5ubuntu1 g++-7_7.3.0-15ubuntu2 gcc-7_7.3.0-15ubuntu2 libc6-dev_2.27-0ubuntu3 libstdc++-7-dev_7.3.0-15ubuntu2 libstdc++6_8-20180406-0ubuntu1 linux-libc-dev_4.15.0-15.16 Package versions: adduser_3.116ubuntu1 advancecomp_2.1-1 apt_1.6~beta1 apt-transport-https_1.6~beta1 autoconf_2.69-11 automake_1:1.15.1-3ubuntu2 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10ubuntu1 base-passwd_3.5.44 bash_4.4.18-2ubuntu1 binutils_2.30-14ubuntu2 binutils-common_2.30-14ubuntu2 binutils-s390x-linux-gnu_2.30-14ubuntu2 bsdmainutils_11.1.2ubuntu1 bsdutils_1:2.31.1-0.4ubuntu3 build-essential_12.4ubuntu1 bzip2_1.0.6-8.1 ca-certificates_20170717 cmake_3.10.2-1ubuntu1 cmake-data_3.10.2-1ubuntu1 coreutils_8.28-1ubuntu1 cpp_4:7.3.0-3ubuntu2 cpp-7_7.3.0-15ubuntu2 d-shlibs_0.82 dash_0.5.8-2.10 debconf_1.5.66 debhelper_11.1.6ubuntu1 debianutils_4.8.4 dh-autoreconf_17 dh-strip-nondeterminism_0.040-1.1~build1 diffutils_1:3.6-1 dirmngr_2.2.4-1ubuntu1 dmsetup_2:1.02.145-4.1ubuntu2 dpkg_1.19.0.5ubuntu1 dpkg-dev_1.19.0.5ubuntu1 e2fslibs_1.44.1-1 e2fsprogs_1.44.1-1 fakeroot_1.22-2ubuntu1 fdisk_2.31.1-0.4ubuntu3 file_1:5.32-2 findutils_4.6.0+git+20170828-2 g++_4:7.3.0-3ubuntu2 g++-7_7.3.0-15ubuntu2 gcc_4:7.3.0-3ubuntu2 gcc-7_7.3.0-15ubuntu2 gcc-7-base_7.3.0-15ubuntu2 gcc-8-base_8-20180406-0ubuntu1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 gnupg_2.2.4-1ubuntu1 gnupg-agent_2.2.4-1ubuntu1 gnupg-l10n_2.2.4-1ubuntu1 gnupg-utils_2.2.4-1ubuntu1 gpg_2.2.4-1ubuntu1 gpg-agent_2.2.4-1ubuntu1 gpg-wks-client_2.2.4-1ubuntu1 gpg-wks-server_2.2.4-1ubuntu1 gpgconf_2.2.4-1ubuntu1 gpgsm_2.2.4-1ubuntu1 gpgv_2.2.4-1ubuntu1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5ubuntu1 hostname_3.20 init_1.51 init-system-helpers_1.51 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libapparmor1_2.12-4ubuntu4 libapt-pkg5.0_1.6~beta1 libarchive-zip-perl_1.60-1 libarchive13_3.2.2-3.1 libargon2-0_0~20161029-1.1 libasan4_7.3.0-15ubuntu2 libasn1-8-heimdal_7.5.0+dfsg-1 libassuan0_2.5.1-2 libatomic1_8-20180406-0ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.8.2-1ubuntu1 libaudit1_1:2.8.2-1ubuntu1 libbinutils_2.30-14ubuntu2 libblkid1_2.31.1-0.4ubuntu3 libbpp-core-dev_2.4.0-3 libbpp-core4_2.4.0-3 libbpp-seq-dev_2.4.0-2 libbpp-seq12_2.4.0-2 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-0ubuntu3 libc-dev-bin_2.27-0ubuntu3 libc6_2.27-0ubuntu3 libc6-dev_2.27-0ubuntu3 libcap-ng0_0.7.7-3.1 libcap2_1:2.25-1.2 libcc1-0_8-20180406-0ubuntu1 libcom-err2_1.44.1-1 libcomerr2_1.44.1-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.2-1ubuntu1 libcryptsetup4_2:1.7.3-4ubuntu1 libcurl3-gnutls_7.58.0-2ubuntu3 libcurl4_7.58.0-2ubuntu3 libdb5.3_5.3.28-13.1 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu2 libdpkg-perl_1.19.0.5ubuntu1 libexpat1_2.2.5-3 libext2fs2_1.44.1-1 libfakeroot_1.22-2ubuntu1 libfdisk1_2.31.1-0.4ubuntu3 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.040-1.1~build1 libgcc-7-dev_7.3.0-15ubuntu2 libgcc1_1:8-20180406-0ubuntu1 libgcrypt20_1.8.1-4ubuntu1 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libglib2.0-0_2.56.0-4ubuntu1 libgmp10_2:6.1.2+dfsg-2 libgnutls30_3.5.18-1ubuntu1 libgomp1_8-20180406-0ubuntu1 libgpg-error0_1.27-6 libgssapi-krb5-2_1.16-2build1 libgssapi3-heimdal_7.5.0+dfsg-1 libhcrypto4-heimdal_7.5.0+dfsg-1 libheimbase1-heimdal_7.5.0+dfsg-1 libheimntlm0-heimdal_7.5.0+dfsg-1 libhogweed4_3.4-1 libhx509-5-heimdal_7.5.0+dfsg-1 libicu60_60.2-3ubuntu3 libidn11_1.33-2.1ubuntu1 libidn2-0_2.0.4-1.1build2 libip4tc0_1.6.1-2ubuntu2 libisl15_0.18-4 libisl19_0.19-1 libitm1_8-20180406-0ubuntu1 libjson-c3_0.12.1-1.3 libjsoncpp1_1.7.4-3 libk5crypto3_1.16-2build1 libkeyutils1_1.5.9-9.2ubuntu1 libkmod2_24-1ubuntu3 libkrb5-26-heimdal_7.5.0+dfsg-1 libkrb5-3_1.16-2build1 libkrb5support0_1.16-2build1 libksba8_1.3.5-2 libldap-2.4-2_2.4.45+dfsg-1ubuntu1 libldap-common_2.4.45+dfsg-1ubuntu1 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 liblz4-1_0.0~r131-2ubuntu3 liblzma5_5.2.2-1.3 liblzo2-2_2.08-1.2 libmagic-mgc_1:5.32-2 libmagic1_1:5.32-2 libmount1_2.31.1-0.4ubuntu3 libmpc3_1.1.0-1 libmpfr4_3.1.6-1 libmpfr6_4.0.1-1 libncurses5_6.1-1ubuntu1 libncursesw5_6.1-1ubuntu1 libnettle6_3.4-1 libnghttp2-14_1.30.0-1 libnpth0_1.5-3 libp11-kit0_0.23.9-2 libpam-modules_1.1.8-3.6ubuntu2 libpam-modules-bin_1.1.8-3.6ubuntu2 libpam-runtime_1.1.8-3.6ubuntu2 libpam0g_1.1.8-3.6ubuntu2 libpcre3_2:8.39-9 libperl5.26_5.26.1-5 libpipeline1_1.5.0-1 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-3ubuntu1 libpsl5_0.19.1-5build1 libreadline7_7.0-3 librhash0_1.3.6-2 libroken18-heimdal_7.5.0+dfsg-1 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3ubuntu2 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3ubuntu2 libseccomp2_2.3.1-2.1ubuntu4 libselinux1_2.7-2build2 libsemanage-common_2.7-2build2 libsemanage1_2.7-2build2 libsepol1_2.7-1 libsigsegv2_2.12-1 libslang2_2.3.1a-3ubuntu1 libsmartcols1_2.31.1-0.4ubuntu3 libsqlite3-0_3.22.0-1 libss2_1.44.1-1 libssl1.0.0_1.0.2n-1ubuntu5 libssl1.1_1.1.0g-2ubuntu3 libstdc++-7-dev_7.3.0-15ubuntu2 libstdc++6_8-20180406-0ubuntu1 libsystemd0_237-3ubuntu7 libtasn1-6_4.13-2 libtimedate-perl_2.3000-2 libtinfo5_6.1-1ubuntu1 libtool_2.4.6-2 libubsan0_7.3.0-15ubuntu2 libudev1_237-3ubuntu7 libunistring0_0.9.3-5.2ubuntu1 libunistring2_0.9.9-0ubuntu1 libusb-0.1-4_2:0.1.12-31 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.4ubuntu3 libuv1_1.18.0-3 libwind0-heimdal_7.5.0+dfsg-1 libxml2_2.9.4+dfsg1-6.1ubuntu1 linux-libc-dev_4.15.0-15.16 lockfile-progs_0.1.17build1 login_1:4.5-1ubuntu1 lsb-base_9.20170808ubuntu1 m4_1.4.18-1 make_4.1-9.1 man-db_2.8.3-2 mawk_1.3.3-17ubuntu3 mount_2.31.1-0.4ubuntu3 multiarch-support_2.27-0ubuntu3 ncurses-base_6.1-1ubuntu1 ncurses-bin_6.1-1ubuntu1 openssl_1.1.0g-2ubuntu3 optipng_0.7.6-1.1 passwd_1:4.5-1ubuntu1 patch_2.7.6-1 perl_5.26.1-5 perl-base_5.26.1-5 perl-modules-5.26_5.26.1-5 pinentry-curses_1.1.0-1 pkgbinarymangler_135 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-3ubuntu1 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libbpp-seq-omics-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 systemd_237-3ubuntu7 systemd-sysv_237-3ubuntu7 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu1 tar_1.29b-2 tzdata_2018d-1 ubuntu-keyring_2018.02.28 util-linux_2.31.1-0.4ubuntu3 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sun Apr 8 16:30:29 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libbpp-seq-omics_2.4.0-2.dsc dpkg-source: info: extracting libbpp-seq-omics in libbpp-seq-omics-2.4.0 dpkg-source: info: unpacking libbpp-seq-omics_2.4.0.orig.tar.gz dpkg-source: info: unpacking libbpp-seq-omics_2.4.0-2.debian.tar.xz dpkg-source: info: applying unforce-cxxflags.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-14739639 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-14739639 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-14739639 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package libbpp-seq-omics dpkg-buildpackage: info: source version 2.4.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build libbpp-seq-omics-2.4.0 dpkg-buildpackage: info: host architecture s390x fakeroot debian/rules clean dh clean dh_auto_clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a cd obj-s390x-linux-gnu && cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -- The CXX compiler identification is GNU 7.3.0 -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- bpp-core 4.0.0 found: -- static lib: /usr/lib/s390x-linux-gnu/libbpp-core.a -- shared lib: /usr/lib/s390x-linux-gnu/libbpp-core.so.4.0.0 -- includes: /usr/include -- bpp-seq 12.0.0 found: -- static lib: /usr/lib/s390x-linux-gnu/libbpp-seq.a -- shared lib: /usr/lib/s390x-linux-gnu/libbpp-seq.so.12.0.0 -- includes: /usr/include -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /<>/obj-s390x-linux-gnu dh_auto_build -a cd obj-s390x-linux-gnu && make -j4 -O make[1]: Entering directory '/<>/obj-s390x-linux-gnu' /usr/bin/cmake -H/<> -B/<>/obj-s390x-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make[1]: Leaving directory '/<>/obj-s390x-linux-gnu' make[1]: Entering directory '/<>/obj-s390x-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-s390x-linux-gnu/CMakeFiles /<>/obj-s390x-linux-gnu/CMakeFiles/progress.marks make[1]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f CMakeFiles/Makefile2 all make -f src/CMakeFiles/bpp-seq-omics-shared.dir/build.make src/CMakeFiles/bpp-seq-omics-shared.dir/depend make -f src/CMakeFiles/bpp-seq-omics-static.dir/build.make src/CMakeFiles/bpp-seq-omics-static.dir/depend make[3]: Entering directory '/<>/obj-s390x-linux-gnu' cd /<>/obj-s390x-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-s390x-linux-gnu /<>/obj-s390x-linux-gnu/src /<>/obj-s390x-linux-gnu/src/CMakeFiles/bpp-seq-omics-shared.dir/DependInfo.cmake --color= Scanning dependencies of target bpp-seq-omics-shared make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f src/CMakeFiles/bpp-seq-omics-shared.dir/build.make src/CMakeFiles/bpp-seq-omics-shared.dir/build make[3]: Entering directory '/<>/obj-s390x-linux-gnu' cd /<>/obj-s390x-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-s390x-linux-gnu /<>/obj-s390x-linux-gnu/src /<>/obj-s390x-linux-gnu/src/CMakeFiles/bpp-seq-omics-static.dir/DependInfo.cmake --color= Scanning dependencies of target bpp-seq-omics-static make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f src/CMakeFiles/bpp-seq-omics-static.dir/build.make src/CMakeFiles/bpp-seq-omics-static.dir/build make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 4%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o -c /<>/src/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 2%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o -c /<>/src/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 3%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o -c /<>/src/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 2%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o -c /<>/src/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 7%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o -c /<>/src/Bpp/Seq/Feature/SequenceFeature.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 6%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp.o -c /<>/src/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 10%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Fastq.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Fastq.cpp.o -c /<>/src/Bpp/Seq/Io/Fastq.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 8%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp.o -c /<>/src/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 9%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o -c /<>/src/Bpp/Seq/Feature/SequenceFeatureTools.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 14%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o -c /<>/src/Bpp/Seq/Feature/SequenceFeature.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 15%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 17%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o -c /<>/src/Bpp/Seq/Feature/SequenceFeatureTools.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 19%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Fastq.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Fastq.cpp.o -c /<>/src/Bpp/Seq/Io/Fastq.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 13%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/BlockMergerMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/BlockMergerMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/BlockMergerMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 12%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/AlignmentFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/AlignmentFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/AlignmentFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 23%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 18%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 21%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 20%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/AlignmentFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/AlignmentFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/AlignmentFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 24%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 25%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 26%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 29%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 28%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/BlockMergerMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/BlockMergerMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/BlockMergerMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 32%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/FullGapFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/FullGapFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/FullGapFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 34%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/IterationListener.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/IterationListener.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/IterationListener.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 30%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 31%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 36%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/MafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 35%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 39%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 40%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafSequence.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafSequence.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/MafSequence.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 37%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafParser.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafParser.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/MafParser.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 42%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 41%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/MafStatistics.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 43%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 45%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 48%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 50%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 47%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 46%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 51%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/FullGapFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/FullGapFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/FullGapFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 52%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/IterationListener.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/IterationListener.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/IterationListener.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 53%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OrderFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OrderFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/OrderFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 54%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 56%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/MafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 58%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/OutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 60%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 57%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 59%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafParser.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafParser.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/MafParser.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 63%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafSequence.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafSequence.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/MafSequence.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 62%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 65%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 64%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/MafStatistics.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 68%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 67%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 73%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 70%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 69%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 71%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 74%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 75%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OrderFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OrderFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/OrderFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 76%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 79%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 78%] Building CXX object src/CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -Dbpp_seq_omics_shared_EXPORTS -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 80%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 84%] Linking CXX shared library libbpp-seq-omics.so cd /<>/obj-s390x-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpp-seq-omics-shared.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libbpp-seq-omics.so.3 -o libbpp-seq-omics.so.3.0.0 CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Fastq.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/AlignmentFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/BlockMergerMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp.o 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CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OrderFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/OutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-shared.dir/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp.o /usr/lib/s390x-linux-gnu/libbpp-seq.so.12.0.0 /usr/lib/s390x-linux-gnu/libbpp-core.so.4.0.0 cd /<>/obj-s390x-linux-gnu/src && /usr/bin/cmake -E cmake_symlink_library libbpp-seq-omics.so.3.0.0 libbpp-seq-omics.so.3 libbpp-seq-omics.so make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[2]: Entering directory '/<>/obj-s390x-linux-gnu' [ 85%] Built target bpp-seq-omics-shared make[2]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 81%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/OutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f test/CMakeFiles/test_gff.dir/build.make test/CMakeFiles/test_gff.dir/depend make[3]: Entering directory '/<>/obj-s390x-linux-gnu' cd /<>/obj-s390x-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/obj-s390x-linux-gnu /<>/obj-s390x-linux-gnu/test /<>/obj-s390x-linux-gnu/test/CMakeFiles/test_gff.dir/DependInfo.cmake --color= Scanning dependencies of target test_gff make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f test/CMakeFiles/test_gff.dir/build.make test/CMakeFiles/test_gff.dir/build make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 82%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 87%] Building CXX object test/CMakeFiles/test_gff.dir/test_gff.cpp.o cd /<>/obj-s390x-linux-gnu/test && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -o CMakeFiles/test_gff.dir/test_gff.cpp.o -c /<>/test/test_gff.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 90%] Linking CXX executable test_gff cd /<>/obj-s390x-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_gff.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_gff.dir/test_gff.cpp.o -o test_gff -Wl,-rpath,/<>/obj-s390x-linux-gnu/src ../src/libbpp-seq-omics.so.3.0.0 /usr/lib/s390x-linux-gnu/libbpp-seq.so.12.0.0 /usr/lib/s390x-linux-gnu/libbpp-core.so.4.0.0 make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[2]: Entering directory '/<>/obj-s390x-linux-gnu' [ 90%] Built target test_gff make[2]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f test/CMakeFiles/test_fastq.dir/build.make test/CMakeFiles/test_fastq.dir/depend make[3]: Entering directory '/<>/obj-s390x-linux-gnu' cd /<>/obj-s390x-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/obj-s390x-linux-gnu /<>/obj-s390x-linux-gnu/test /<>/obj-s390x-linux-gnu/test/CMakeFiles/test_fastq.dir/DependInfo.cmake --color= Scanning dependencies of target test_fastq make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f test/CMakeFiles/test_fastq.dir/build.make test/CMakeFiles/test_fastq.dir/build make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 86%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 91%] Building CXX object test/CMakeFiles/test_fastq.dir/test_fastq.cpp.o cd /<>/obj-s390x-linux-gnu/test && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -o CMakeFiles/test_fastq.dir/test_fastq.cpp.o -c /<>/test/test_fastq.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 85%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 93%] Linking CXX executable test_fastq cd /<>/obj-s390x-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_fastq.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_fastq.dir/test_fastq.cpp.o -o test_fastq -Wl,-rpath,/<>/obj-s390x-linux-gnu/src ../src/libbpp-seq-omics.so.3.0.0 /usr/lib/s390x-linux-gnu/libbpp-seq.so.12.0.0 /usr/lib/s390x-linux-gnu/libbpp-core.so.4.0.0 make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[2]: Entering directory '/<>/obj-s390x-linux-gnu' [ 95%] Built target test_fastq make[2]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 89%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 92%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 97%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 95%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 96%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 98%] Building CXX object src/CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp.o cd /<>/obj-s390x-linux-gnu/src && /usr/bin/c++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp.o -c /<>/src/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [100%] Linking CXX static library libbpp-seq-omics.a cd /<>/obj-s390x-linux-gnu/src && /usr/bin/cmake -P CMakeFiles/bpp-seq-omics-static.dir/cmake_clean_target.cmake cd /<>/obj-s390x-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpp-seq-omics-static.dir/link.txt --verbose=1 /usr/bin/ar qc libbpp-seq-omics.a CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/Gtf/GtfFeatureReader.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Feature/SequenceFeatureTools.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Fastq.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/AlignmentFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/BlockMergerMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/ChromosomeMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/ConcatenateMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/FullGapFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/IterationListener.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafParser.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafSequence.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MafStatistics.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MaskFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/TableOutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OrderFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/OutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/QualityFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/VcfOutputMafIterator.cpp.o CMakeFiles/bpp-seq-omics-static.dir/Bpp/Seq/Io/Maf/WindowSplitMafIterator.cpp.o /usr/bin/ranlib libbpp-seq-omics.a make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make[2]: Entering directory '/<>/obj-s390x-linux-gnu' [100%] Built target bpp-seq-omics-static make[2]: Leaving directory '/<>/obj-s390x-linux-gnu' make[1]: Entering directory '/<>/obj-s390x-linux-gnu' /usr/bin/cmake -E cmake_progress_start 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Passed 0.01 sec 100% tests passed, 0 tests failed out of 2 Total Test time (real) = 0.01 sec make[1]: Leaving directory '/<>/obj-s390x-linux-gnu' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_auto_install -a cd obj-s390x-linux-gnu && make -j4 -O install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>/obj-s390x-linux-gnu' /usr/bin/cmake -H/<> -B/<>/obj-s390x-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make[1]: Leaving directory '/<>/obj-s390x-linux-gnu' make[1]: Entering directory '/<>/obj-s390x-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-s390x-linux-gnu/CMakeFiles /<>/obj-s390x-linux-gnu/CMakeFiles/progress.marks make[1]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f CMakeFiles/Makefile2 all make -f src/CMakeFiles/bpp-seq-omics-shared.dir/build.make src/CMakeFiles/bpp-seq-omics-shared.dir/depend make -f src/CMakeFiles/bpp-seq-omics-static.dir/build.make src/CMakeFiles/bpp-seq-omics-static.dir/depend make[3]: Entering directory '/<>/obj-s390x-linux-gnu' cd /<>/obj-s390x-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-s390x-linux-gnu /<>/obj-s390x-linux-gnu/src /<>/obj-s390x-linux-gnu/src/CMakeFiles/bpp-seq-omics-static.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f src/CMakeFiles/bpp-seq-omics-static.dir/build.make src/CMakeFiles/bpp-seq-omics-static.dir/build make[3]: Entering directory '/<>/obj-s390x-linux-gnu' cd /<>/obj-s390x-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-s390x-linux-gnu /<>/obj-s390x-linux-gnu/src /<>/obj-s390x-linux-gnu/src/CMakeFiles/bpp-seq-omics-shared.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f src/CMakeFiles/bpp-seq-omics-shared.dir/build.make src/CMakeFiles/bpp-seq-omics-shared.dir/build make[3]: Nothing to be done for 'src/CMakeFiles/bpp-seq-omics-static.dir/build'. make[3]: Nothing to be done for 'src/CMakeFiles/bpp-seq-omics-shared.dir/build'. make[2]: Entering directory '/<>/obj-s390x-linux-gnu' [ 47%] Built target bpp-seq-omics-static make[2]: Leaving directory '/<>/obj-s390x-linux-gnu' make[2]: Entering directory '/<>/obj-s390x-linux-gnu' [ 95%] Built target bpp-seq-omics-shared make[2]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f test/CMakeFiles/test_gff.dir/build.make test/CMakeFiles/test_gff.dir/depend make -f test/CMakeFiles/test_fastq.dir/build.make test/CMakeFiles/test_fastq.dir/depend make[3]: Entering directory '/<>/obj-s390x-linux-gnu' cd /<>/obj-s390x-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/obj-s390x-linux-gnu /<>/obj-s390x-linux-gnu/test /<>/obj-s390x-linux-gnu/test/CMakeFiles/test_fastq.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f test/CMakeFiles/test_fastq.dir/build.make test/CMakeFiles/test_fastq.dir/build make[3]: Entering directory '/<>/obj-s390x-linux-gnu' cd /<>/obj-s390x-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/test /<>/obj-s390x-linux-gnu /<>/obj-s390x-linux-gnu/test /<>/obj-s390x-linux-gnu/test/CMakeFiles/test_gff.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f test/CMakeFiles/test_gff.dir/build.make test/CMakeFiles/test_gff.dir/build make[3]: Nothing to be done for 'test/CMakeFiles/test_fastq.dir/build'. make[3]: Nothing to be done for 'test/CMakeFiles/test_gff.dir/build'. make[2]: Entering directory '/<>/obj-s390x-linux-gnu' [ 97%] Built target test_fastq make[2]: Leaving directory '/<>/obj-s390x-linux-gnu' make[2]: Entering directory '/<>/obj-s390x-linux-gnu' [100%] Built target test_gff make[2]: Leaving directory '/<>/obj-s390x-linux-gnu' make[1]: Entering directory '/<>/obj-s390x-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-s390x-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f CMakeFiles/Makefile2 preinstall make[2]: Nothing to be done for 'preinstall'. make[1]: Entering directory '/<>/obj-s390x-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /<>/debian/tmp/usr/lib/s390x-linux-gnu/cmake/bpp-seq-omics/bpp-seq-omics-config.cmake -- Installing: /<>/debian/tmp/usr/lib/s390x-linux-gnu/cmake/bpp-seq-omics/bpp-seq-omics-config-version.cmake -- Installing: /<>/debian/tmp/usr/lib/s390x-linux-gnu/libbpp-seq-omics.a -- Installing: /<>/debian/tmp/usr/lib/s390x-linux-gnu/libbpp-seq-omics.so.3.0.0 -- Installing: /<>/debian/tmp/usr/lib/s390x-linux-gnu/libbpp-seq-omics.so.3 -- Installing: /<>/debian/tmp/usr/lib/s390x-linux-gnu/libbpp-seq-omics.so -- Installing: /<>/debian/tmp/usr/include/Bpp -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Feature -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Feature/SequenceFeatureTools.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Feature/Gff -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Feature/Gff/GffFeatureReader.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Feature/Bed -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Feature/Gtf -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Feature/Gtf/GtfFeatureReader.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Feature/SequenceFeature.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Feature/FeatureReader.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/MafParser.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/IterationListener.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/QualityFilterMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/OrderFilterMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/WindowSplitMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/VcfOutputMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/MafBlock.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/ConcatenateMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/BlockLengthMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/BlockMergerMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/OutputMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/BlockSizeMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/ChromosomeMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/MafSequence.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/AlignmentFilterMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/FullGapFilterMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/TableOutputMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/MafStatistics.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/MaskFilterMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/MafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.h -- Installing: /<>/debian/tmp/usr/include/Bpp/Seq/Io/Fastq.h -- Installing: /<>/debian/tmp/usr/lib/s390x-linux-gnu/cmake/bpp-seq-omics/bpp-seq-omics-targets.cmake -- Installing: /<>/debian/tmp/usr/lib/s390x-linux-gnu/cmake/bpp-seq-omics/bpp-seq-omics-targets-none.cmake make[1]: Leaving directory '/<>/obj-s390x-linux-gnu' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ --movedev debian/tmp/usr/lib/*/cmake usr/lib/s390x-linux-gnu \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility --> libbpp-core-dev package exists. --> libbpp-seq-dev package exists. set -e install -d -m 755 debian/libbpp-seq-omics-dev/usr/lib/s390x-linux-gnu install -d -m 755 debian/libbpp-seq-omics3/usr/lib/s390x-linux-gnu mv debian/tmp/usr/lib/s390x-linux-gnu/libbpp-seq-omics.a debian/libbpp-seq-omics-dev/usr/lib/s390x-linux-gnu mv debian/tmp/usr/lib/s390x-linux-gnu/libbpp-seq-omics.so debian/libbpp-seq-omics-dev/usr/lib/s390x-linux-gnu mv /<>/debian/tmp/usr/lib/s390x-linux-gnu/libbpp-seq-omics.so.3 debian/libbpp-seq-omics3/usr/lib/s390x-linux-gnu mv /<>/debian/tmp/usr/lib/s390x-linux-gnu/libbpp-seq-omics.so.3.0.0 debian/libbpp-seq-omics3/usr/lib/s390x-linux-gnu PKGDEV=libbpp-seq-omics-dev PKGSHL=libbpp-seq-omics3 install -d -m 755 debian/libbpp-seq-omics-dev/usr/include mv debian/tmp/usr/include/Bpp debian/libbpp-seq-omics-dev/usr/include install -d -m 755 debian/libbpp-seq-omics-dev/usr/lib/s390x-linux-gnu mv debian/tmp/usr/lib/s390x-linux-gnu/cmake debian/libbpp-seq-omics-dev/usr/lib/s390x-linux-gnu make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a debian/rules override_dh_makeshlibs make[1]: Entering directory '/<>' echo "Symbols file for architecture s390x is not provided" Symbols file for architecture s390x is not provided mkdir -p debian/hidesymbols mv debian/*.symbols debian/hidesymbols dh_makeshlibs # restore original debian/ dir to enable building twice in a row mv debian/hidesymbols/*.symbols debian rmdir debian/hidesymbols make[1]: Leaving directory '/<>' dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package libbpp-seq-omics-dev: unused substitution variable ${devlibs:Depends} dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 135 INFO: pkgstriptranslations version 135 INFO: pkgstriptranslations version 135 pkgstriptranslations: processing libbpp-seq-omics3 (in debian/libbpp-seq-omics3); do_strip: , oemstrip: pkgstriptranslations: processing libbpp-seq-omics3-dbgsym (in debian/.debhelper/libbpp-seq-omics3/dbgsym-root); do_strip: , oemstrip: pkgstriptranslations: processing libbpp-seq-omics-dev (in debian/libbpp-seq-omics-dev); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libbpp-seq-omics3/DEBIAN/control, package libbpp-seq-omics3, directory debian/libbpp-seq-omics3 INFO: pkgstripfiles: waiting for lock (libbpp-seq-omics3) ... pkgstripfiles: processing control file: debian/.debhelper/libbpp-seq-omics3/dbgsym-root/DEBIAN/control, package libbpp-seq-omics3-dbgsym, directory debian/.debhelper/libbpp-seq-omics3/dbgsym-root pkgstripfiles: Running PNG optimization (using 4 cpus) for package libbpp-seq-omics3-dbgsym ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libbpp-seq-omics3-dbgsym' in 'debian/.debhelper/scratch-space/build-libbpp-seq-omics3/libbpp-seq-omics3-dbgsym_2.4.0-2_s390x.deb'. INFO: pkgstripfiles: waiting for lock (libbpp-seq-omics3) ... INFO: pkgstripfiles: waiting for lock (libbpp-seq-omics3) ... Renaming libbpp-seq-omics3-dbgsym_2.4.0-2_s390x.deb to libbpp-seq-omics3-dbgsym_2.4.0-2_s390x.ddeb INFO: pkgstripfiles: waiting for lock (libbpp-seq-omics3) ... INFO: pkgstripfiles: waiting for lock (libbpp-seq-omics3) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libbpp-seq-omics-dev/DEBIAN/control, package libbpp-seq-omics-dev, directory debian/libbpp-seq-omics-dev INFO: pkgstripfiles: waiting for lock (libbpp-seq-omics3) ... Searching for duplicated docs in dependency libbpp-seq-omics3... symlinking changelog.Debian.gz in libbpp-seq-omics-dev to file in libbpp-seq-omics3 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libbpp-seq-omics-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libbpp-seq-omics-dev' in '../libbpp-seq-omics-dev_2.4.0-2_s390x.deb'. pkgstripfiles: Truncating usr/share/doc/libbpp-seq-omics3/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package libbpp-seq-omics3 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libbpp-seq-omics3' in '../libbpp-seq-omics3_2.4.0-2_s390x.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../libbpp-seq-omics_2.4.0-2_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build libbpp-seq-omics-2.4.0 dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20180409-0240 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libbpp-seq-omics_2.4.0-2_s390x.changes: --------------------------------------- Format: 1.8 Date: Sun, 08 Apr 2018 18:29:27 +0200 Source: libbpp-seq-omics Binary: libbpp-seq-omics-dev libbpp-seq-omics3 Architecture: s390x Version: 2.4.0-2 Distribution: bionic-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Julien Dutheil Description: libbpp-seq-omics-dev - Bio++ Sequence library: genomics components (development files) libbpp-seq-omics3 - Bio++ Sequence library: genomics components Closes: 895212 Changes: libbpp-seq-omics (2.4.0-2) unstable; urgency=medium . [ Julien Dutheil ] * Provide symbols file only for amd64 Closes: #895212 * Versioned Build-Depends: d-shlibs (>= 0.82) . [ Andreas Tille ] * Provide full license text of CeCILL license * Point Vcs fields to salsa.debian.org Checksums-Sha1: 952950239aa3edc19e9fc1203606240dc2e805e1 346816 libbpp-seq-omics-dev_2.4.0-2_s390x.deb b49fab40e89df1c24803890be4493ad02d0eefbf 6980232 libbpp-seq-omics3-dbgsym_2.4.0-2_s390x.ddeb 2d4994f31c071204c892de58b9508892ca25272d 195068 libbpp-seq-omics3_2.4.0-2_s390x.deb d00a302f1b9906cb9198513c3aea3acd92aed982 7043 libbpp-seq-omics_2.4.0-2_s390x.buildinfo Checksums-Sha256: 874d07b772428ccc02ea9fa7b50af0683117238de93478c96057ddcecab96085 346816 libbpp-seq-omics-dev_2.4.0-2_s390x.deb a3a85f27de73564eafd982d75f6838cc75eae6dfec360c2ab54ad4581ffc4fdb 6980232 libbpp-seq-omics3-dbgsym_2.4.0-2_s390x.ddeb a0f38148a7f70170e8f2ab19020c460a0f3027e5f1b1ad97f704f02e868459c7 195068 libbpp-seq-omics3_2.4.0-2_s390x.deb 67d54081f4fef9bb0f64fa101442e600a76e4a6729dd94058f709994fd9189f3 7043 libbpp-seq-omics_2.4.0-2_s390x.buildinfo Files: 4f8f5e357b8c6627d202d4efdccbe862 346816 libdevel optional libbpp-seq-omics-dev_2.4.0-2_s390x.deb 14fffeb195cff4c6ee72287d5359bdd3 6980232 debug optional libbpp-seq-omics3-dbgsym_2.4.0-2_s390x.ddeb e390a1fb22f604a2d9e3e9a9219c86e0 195068 libs optional libbpp-seq-omics3_2.4.0-2_s390x.deb e2ae106da5e4b2b494f12f8f528aa5d2 7043 science optional libbpp-seq-omics_2.4.0-2_s390x.buildinfo +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libbpp-seq-omics-dev_2.4.0-2_s390x.deb -------------------------------------- new debian package, version 2.0. size 346816 bytes: control archive=2228 bytes. 991 bytes, 20 lines control 4175 bytes, 48 lines md5sums Package: libbpp-seq-omics-dev Source: libbpp-seq-omics Version: 2.4.0-2 Architecture: s390x Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 4011 Depends: libbpp-seq-omics3 (= 2.4.0-2), libbpp-seq-dev (>= 2.4.0) Section: libdevel Priority: optional Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page Description: Bio++ Sequence library: genomics components (development files) Bio++ is a set of C++ libraries for Bioinformatics, including sequence analysis, phylogenetics, molecular evolution and population genetics. Bio++ is Object Oriented and is designed to be both easy to use and computer efficient. Bio++ intends to help programmers to write computer expensive programs, by providing them a set of re-usable tools. . This package contains the static library and the header files of the Bio++ classes dedicated to genomic sequencing. drwxr-xr-x root/root 0 2018-04-08 16:29 ./ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/include/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/include/Bpp/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/include/Bpp/Seq/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/include/Bpp/Seq/Feature/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/include/Bpp/Seq/Feature/Bed/ -rw-r--r-- root/root 4694 2018-03-12 09:43 ./usr/include/Bpp/Seq/Feature/Bed/BedGraphFeatureReader.h -rw-r--r-- root/root 2497 2018-03-12 09:43 ./usr/include/Bpp/Seq/Feature/FeatureReader.h drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/include/Bpp/Seq/Feature/Gff/ -rw-r--r-- root/root 4782 2018-03-12 09:43 ./usr/include/Bpp/Seq/Feature/Gff/GffFeatureReader.h drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/include/Bpp/Seq/Feature/Gtf/ -rw-r--r-- root/root 3639 2018-03-12 09:43 ./usr/include/Bpp/Seq/Feature/Gtf/GtfFeatureReader.h -rw-r--r-- root/root 20572 2018-03-12 09:43 ./usr/include/Bpp/Seq/Feature/SequenceFeature.h -rw-r--r-- root/root 3441 2018-03-12 09:43 ./usr/include/Bpp/Seq/Feature/SequenceFeatureTools.h drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/include/Bpp/Seq/Io/ -rw-r--r-- root/root 4066 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Fastq.h drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/include/Bpp/Seq/Io/Maf/ -rw-r--r-- root/root 9903 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/AlignmentFilterMafIterator.h -rw-r--r-- root/root 2884 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/BlockLengthMafIterator.h -rw-r--r-- root/root 4640 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/BlockMergerMafIterator.h -rw-r--r-- root/root 2878 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/BlockSizeMafIterator.h -rw-r--r-- root/root 2916 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/ChromosomeMafIterator.h -rw-r--r-- root/root 3396 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/ConcatenateMafIterator.h -rw-r--r-- root/root 4524 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/CoordinateTranslatorMafIterator.h -rw-r--r-- root/root 3918 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/CoordinatesOutputMafIterator.h -rw-r--r-- root/root 3060 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/DuplicateFilterMafIterator.h -rw-r--r-- root/root 3608 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/EntropyFilterMafIterator.h -rw-r--r-- root/root 3781 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/FeatureExtractorMafIterator.h -rw-r--r-- root/root 3307 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/FeatureFilterMafIterator.h -rw-r--r-- root/root 2724 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/FullGapFilterMafIterator.h -rw-r--r-- root/root 4455 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/IterationListener.h -rw-r--r-- root/root 8676 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/MafBlock.h -rw-r--r-- root/root 6822 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/MafIterator.h -rw-r--r-- root/root 4248 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/MafParser.h -rw-r--r-- root/root 8008 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/MafSequence.h -rw-r--r-- root/root 22454 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/MafStatistics.h -rw-r--r-- root/root 3223 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/MaskFilterMafIterator.h -rw-r--r-- root/root 4276 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/MsmcOutputMafIterator.h -rw-r--r-- root/root 5518 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/OrderFilterMafIterator.h -rw-r--r-- root/root 3696 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/OrphanSequenceFilterMafIterator.h -rw-r--r-- root/root 7473 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/OutputAlignmentMafIterator.h -rw-r--r-- root/root 3042 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/OutputMafIterator.h -rw-r--r-- root/root 5728 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/PlinkOutputMafIterator.h -rw-r--r-- root/root 3211 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/QualityFilterMafIterator.h -rw-r--r-- root/root 2999 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/RemoveEmptySequencesMafIterator.h -rw-r--r-- root/root 4025 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/SequenceFilterMafIterator.h -rw-r--r-- root/root 4120 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/SequenceLDhotOutputMafIterator.h -rw-r--r-- root/root 3928 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/SequenceStatisticsMafIterator.h -rw-r--r-- root/root 3136 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/SequenceStreamToMafIterator.h -rw-r--r-- root/root 3946 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/TableOutputMafIterator.h -rw-r--r-- root/root 4026 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/VcfOutputMafIterator.h -rw-r--r-- root/root 2900 2018-03-12 09:43 ./usr/include/Bpp/Seq/Io/Maf/WindowSplitMafIterator.h drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/lib/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/lib/s390x-linux-gnu/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/lib/s390x-linux-gnu/cmake/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/lib/s390x-linux-gnu/cmake/bpp-seq-omics/ -rw-r--r-- root/root 1607 2018-04-08 16:29 ./usr/lib/s390x-linux-gnu/cmake/bpp-seq-omics/bpp-seq-omics-config-version.cmake -rw-r--r-- root/root 2322 2018-04-08 16:29 ./usr/lib/s390x-linux-gnu/cmake/bpp-seq-omics/bpp-seq-omics-config.cmake -rw-r--r-- root/root 1571 2018-04-08 16:29 ./usr/lib/s390x-linux-gnu/cmake/bpp-seq-omics/bpp-seq-omics-targets-none.cmake -rw-r--r-- root/root 3986 2018-04-08 16:29 ./usr/lib/s390x-linux-gnu/cmake/bpp-seq-omics/bpp-seq-omics-targets.cmake -rw-r--r-- root/root 3817366 2018-04-08 16:29 ./usr/lib/s390x-linux-gnu/libbpp-seq-omics.a lrwxrwxrwx root/root 0 2018-04-08 16:29 ./usr/lib/s390x-linux-gnu/libbpp-seq-omics.so -> libbpp-seq-omics.so.3 drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/share/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/share/doc/libbpp-seq-omics-dev/ lrwxrwxrwx root/root 0 2018-04-08 16:29 ./usr/share/doc/libbpp-seq-omics-dev/changelog.Debian.gz -> ../libbpp-seq-omics3/changelog.Debian.gz -rw-r--r-- root/root 23176 2018-04-08 16:29 ./usr/share/doc/libbpp-seq-omics-dev/copyright libbpp-seq-omics3_2.4.0-2_s390x.deb ----------------------------------- new debian package, version 2.0. size 195068 bytes: control archive=1064 bytes. 987 bytes, 21 lines control 246 bytes, 3 lines md5sums 37 bytes, 1 lines shlibs 74 bytes, 2 lines triggers Package: libbpp-seq-omics3 Source: libbpp-seq-omics Version: 2.4.0-2 Architecture: s390x Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 809 Depends: libbpp-core4, libbpp-seq12, libc6 (>= 2.4), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2) Section: libs Priority: optional Multi-Arch: same Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page Description: Bio++ Sequence library: genomics components Bio++ is a set of C++ libraries for Bioinformatics, including sequence analysis, phylogenetics, molecular evolution and population genetics. Bio++ is Object Oriented and is designed to be both easy to use and computer efficient. Bio++ intends to help programmers to write computer expensive programs, by providing them a set of re-usable tools. . This package contains the dynamic library of the Bio++ classes dedicated to genomic sequencing. drwxr-xr-x root/root 0 2018-04-08 16:29 ./ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/lib/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/lib/s390x-linux-gnu/ lrwxrwxrwx root/root 0 2018-04-08 16:29 ./usr/lib/s390x-linux-gnu/libbpp-seq-omics.so.3 -> libbpp-seq-omics.so.3.0.0 -rw-r--r-- root/root 792544 2018-04-08 16:29 ./usr/lib/s390x-linux-gnu/libbpp-seq-omics.so.3.0.0 drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/share/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-04-08 16:29 ./usr/share/doc/libbpp-seq-omics3/ -rw-r--r-- root/root 995 2018-04-08 16:29 ./usr/share/doc/libbpp-seq-omics3/changelog.Debian.gz -rw-r--r-- root/root 23176 2018-04-08 16:29 ./usr/share/doc/libbpp-seq-omics3/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: s390x Build-Space: 228928 Build-Time: 66 Distribution: bionic-proposed Host Architecture: s390x Install-Time: 8 Job: libbpp-seq-omics_2.4.0-2.dsc Machine Architecture: s390x Package: libbpp-seq-omics Package-Time: 75 Source-Version: 2.4.0-2 Space: 228928 Status: successful Version: 2.4.0-2 -------------------------------------------------------------------------------- Finished at 20180409-0240 Build needed 00:01:15, 228928k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=bionic --arch=s390x PACKAGEBUILD-14739639 Scanning for processes to kill in build PACKAGEBUILD-14739639 RUN: /usr/share/launchpad-buildd/slavebin/in-target umount-chroot --backend=chroot --series=bionic --arch=s390x PACKAGEBUILD-14739639 Stopping target for build PACKAGEBUILD-14739639 RUN: /usr/share/launchpad-buildd/slavebin/in-target remove-build --backend=chroot --series=bionic --arch=s390x PACKAGEBUILD-14739639 Removing build PACKAGEBUILD-14739639