https://launchpad.net/ubuntu/+source/librcsb-core-wrapper/1.005-10/+build/20895226 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-052 4.15.0-130-generic #134-Ubuntu SMP Tue Jan 5 20:43:12 UTC 2021 aarch64 Buildd toolchain package versions: launchpad-buildd_194~476~ubuntu18.04.1 python3-lpbuildd_194~476~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.7 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 17 Jan 23:34:10 ntpdate[1642]: adjust time server 10.211.37.1 offset 0.010217 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=hirsute --arch=arm64 PACKAGEBUILD-20895226 --image-type chroot /home/buildd/filecache-default/d1fb963478283f19fe8f83381d93195a7691df38 Creating target for build PACKAGEBUILD-20895226 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=hirsute --arch=arm64 PACKAGEBUILD-20895226 Starting target for build PACKAGEBUILD-20895226 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=hirsute --arch=arm64 PACKAGEBUILD-20895226 'deb http://ftpmaster.internal/ubuntu hirsute main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-security main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-updates main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-20895226 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=hirsute --arch=arm64 PACKAGEBUILD-20895226 Updating target for build PACKAGEBUILD-20895226 Get:1 http://ftpmaster.internal/ubuntu hirsute InRelease [269 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute-updates InRelease [90.7 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed InRelease [121 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main arm64 Packages [1355 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main Translation-en [511 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/universe arm64 Packages [12.7 MB] Get:8 http://ftpmaster.internal/ubuntu hirsute/universe Translation-en [5405 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 Packages [106 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main Translation-en [43.1 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/universe arm64 Packages [506 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/universe Translation-en [277 kB] Fetched 21.5 MB in 7s (2897 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libisl23 libperl5.32 libxxhash0 perl-modules-5.32 The following packages will be upgraded: adduser apt base-files base-passwd bash binutils binutils-aarch64-linux-gnu binutils-common bsdutils coreutils cpp-10 dash dpkg dpkg-dev fakeroot g++-10 gcc-10 gcc-10-base grep init init-system-helpers libacl1 libapparmor1 libapt-pkg6.0 libasan6 libassuan0 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libfakeroot libgcc-10-dev libgcc-s1 libgcrypt20 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgssapi-krb5-2 libidn2-0 libip4tc2 libitm1 libk5crypto3 libkrb5-3 libkrb5support0 liblsan0 liblz4-1 libmount1 libmpc3 libncurses6 libncursesw6 libnpth0 libp11-kit0 libpcre2-8-0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libssl1.1 libstdc++-10-dev libstdc++6 libsystemd0 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libtsan0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev login mount ncurses-base ncurses-bin openssl passwd patch perl perl-base readline-common sensible-utils systemd systemd-sysv systemd-timesyncd sysvinit-utils tar tzdata util-linux 110 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 80.4 MB of archives. After this operation, 58.6 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu hirsute/main arm64 libcrypt-dev arm64 1:4.4.17-1ubuntu1 [109 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute/main arm64 libc6-dev arm64 2.32-0ubuntu6 [1723 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute/main arm64 libc-dev-bin arm64 2.32-0ubuntu6 [28.7 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute/main arm64 libcrypt1 arm64 1:4.4.17-1ubuntu1 [80.8 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 linux-libc-dev arm64 5.10.0-12.13 [1141 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main arm64 libtirpc-common all 1.3.1-1 [7452 B] Get:7 http://ftpmaster.internal/ubuntu hirsute/main arm64 libk5crypto3 arm64 1.17-10ubuntu1 [79.6 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main arm64 libgssapi-krb5-2 arm64 1.17-10ubuntu1 [112 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute/main arm64 libkrb5-3 arm64 1.17-10ubuntu1 [314 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute/main arm64 libkrb5support0 arm64 1.17-10ubuntu1 [30.2 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute/main arm64 libssl1.1 arm64 1.1.1f-1ubuntu5 [1157 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute/main arm64 libtirpc-dev arm64 1.3.1-1 [185 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute/main arm64 libtirpc3 arm64 1.3.1-1 [73.3 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main arm64 libisl23 arm64 0.23-1 [586 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute/main arm64 libcc1-0 arm64 10.2.1-6ubuntu1 [46.7 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libctf0 arm64 2.35.90.20210113-1ubuntu1 [89.9 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libctf-nobfd0 arm64 2.35.90.20210113-1ubuntu1 [92.5 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 binutils-aarch64-linux-gnu arm64 2.35.90.20210113-1ubuntu1 [2516 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libbinutils arm64 2.35.90.20210113-1ubuntu1 [619 kB] Get:20 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 binutils-common arm64 2.35.90.20210113-1ubuntu1 [216 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 binutils arm64 2.35.90.20210113-1ubuntu1 [3360 B] Get:22 http://ftpmaster.internal/ubuntu hirsute/main arm64 gcc-10-base arm64 10.2.1-6ubuntu1 [19.7 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute/main arm64 libgcc-s1 arm64 10.2.1-6ubuntu1 [34.6 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main arm64 libgomp1 arm64 10.2.1-6ubuntu1 [93.7 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute/main arm64 libitm1 arm64 10.2.1-6ubuntu1 [24.2 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute/main arm64 libatomic1 arm64 10.2.1-6ubuntu1 [9812 B] Get:27 http://ftpmaster.internal/ubuntu hirsute/main arm64 libasan6 arm64 10.2.1-6ubuntu1 [2026 kB] Get:28 http://ftpmaster.internal/ubuntu hirsute/main arm64 liblsan0 arm64 10.2.1-6ubuntu1 [800 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute/main arm64 libtsan0 arm64 10.2.1-6ubuntu1 [1970 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main arm64 libubsan1 arm64 10.2.1-6ubuntu1 [765 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute/main arm64 g++-10 arm64 10.2.1-6ubuntu1 [8917 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute/main arm64 libstdc++-10-dev arm64 10.2.1-6ubuntu1 [1719 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute/main arm64 libgcc-10-dev arm64 10.2.1-6ubuntu1 [915 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute/main arm64 gcc-10 arm64 10.2.1-6ubuntu1 [15.8 MB] Get:35 http://ftpmaster.internal/ubuntu hirsute/main arm64 cpp-10 arm64 10.2.1-6ubuntu1 [7783 kB] Get:36 http://ftpmaster.internal/ubuntu hirsute/main arm64 libstdc++6 arm64 10.2.1-6ubuntu1 [461 kB] Get:37 http://ftpmaster.internal/ubuntu hirsute/main arm64 libmpc3 arm64 1.2.0-1 [42.3 kB] Get:38 http://ftpmaster.internal/ubuntu hirsute/main arm64 libzstd1 arm64 1.4.8+dfsg-1 [274 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main arm64 libc6 arm64 2.32-0ubuntu6 [2246 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute/main arm64 base-files arm64 11ubuntu16 [60.4 kB] Get:41 http://ftpmaster.internal/ubuntu hirsute/main arm64 bash arm64 5.1-1ubuntu1 [632 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute/main arm64 bsdutils arm64 1:2.36.1-1ubuntu2 [82.6 kB] Get:43 http://ftpmaster.internal/ubuntu hirsute/main arm64 coreutils arm64 8.32-4ubuntu2 [1258 kB] Get:44 http://ftpmaster.internal/ubuntu hirsute/main arm64 tar arm64 1.32+dfsg-1 [262 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 dpkg arm64 1.20.7.1ubuntu1 [1241 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute/main arm64 dash arm64 0.5.11+git20200708+dd9ef66+really0.5.11+git20200708+dd9ef66-5ubuntu1 [84.1 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute/main arm64 grep arm64 3.6-1 [147 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute/main arm64 login arm64 1:4.8.1-1ubuntu8 [217 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute/main arm64 libncurses6 arm64 6.2+20201114-2 [92.6 kB] Get:50 http://ftpmaster.internal/ubuntu hirsute/main arm64 libncursesw6 arm64 6.2+20201114-2 [120 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute/main arm64 libtinfo6 arm64 6.2+20201114-2 [81.6 kB] Get:52 http://ftpmaster.internal/ubuntu hirsute/main arm64 ncurses-bin arm64 6.2+20201114-2 [168 kB] Get:53 http://ftpmaster.internal/ubuntu hirsute/main arm64 perl-modules-5.32 all 5.32.0-6 [2754 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main arm64 libperl5.32 arm64 5.32.0-6 [3875 kB] Get:55 http://ftpmaster.internal/ubuntu hirsute/main arm64 perl arm64 5.32.0-6 [225 kB] Get:56 http://ftpmaster.internal/ubuntu hirsute/main arm64 perl-base arm64 5.32.0-6 [1430 kB] Get:57 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libgdbm6 arm64 1.19-1 [26.4 kB] Get:58 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libgdbm-compat4 arm64 1.19-1 [6016 B] Get:59 http://ftpmaster.internal/ubuntu hirsute/main arm64 util-linux arm64 2.36.1-1ubuntu2 [1034 kB] Get:60 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libdebconfclient0 arm64 0.256ubuntu1 [6148 B] Get:61 http://ftpmaster.internal/ubuntu hirsute/main arm64 base-passwd arm64 3.5.48 [46.6 kB] Get:62 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 init-system-helpers all 1.60 [37.8 kB] Get:63 http://ftpmaster.internal/ubuntu hirsute/main arm64 libc-bin arm64 2.32-0ubuntu6 [520 kB] Get:64 http://ftpmaster.internal/ubuntu hirsute/main arm64 ncurses-base all 6.2+20201114-2 [18.4 kB] Get:65 http://ftpmaster.internal/ubuntu hirsute/main arm64 sysvinit-utils arm64 2.96-5ubuntu1 [20.4 kB] Get:66 http://ftpmaster.internal/ubuntu hirsute/main arm64 libxxhash0 arm64 0.8.0-2 [16.9 kB] Get:67 http://ftpmaster.internal/ubuntu hirsute/main arm64 libgcrypt20 arm64 1.8.7-2ubuntu1 [354 kB] Get:68 http://ftpmaster.internal/ubuntu hirsute/main arm64 liblz4-1 arm64 1.9.3-0ubuntu1 [52.0 kB] Get:69 http://ftpmaster.internal/ubuntu hirsute/main arm64 systemd-sysv arm64 247.1-4ubuntu1 [10.3 kB] Get:70 http://ftpmaster.internal/ubuntu hirsute/main arm64 libaudit-common all 1:2.8.5-3ubuntu3 [4048 B] Get:71 http://ftpmaster.internal/ubuntu hirsute/main arm64 libcap-ng0 arm64 0.7.9-2.2build1 [10.5 kB] Get:72 http://ftpmaster.internal/ubuntu hirsute/main arm64 libaudit1 arm64 1:2.8.5-3ubuntu3 [38.1 kB] Get:73 http://ftpmaster.internal/ubuntu hirsute/main arm64 libpcre2-8-0 arm64 10.35-2ubuntu1 [172 kB] Get:74 http://ftpmaster.internal/ubuntu hirsute/main arm64 libselinux1 arm64 3.1-2build2 [65.4 kB] Get:75 http://ftpmaster.internal/ubuntu hirsute/main arm64 libsemanage-common all 3.1-1build2 [10.0 kB] Get:76 http://ftpmaster.internal/ubuntu hirsute/main arm64 libsemanage1 arm64 3.1-1build2 [80.6 kB] Get:77 http://ftpmaster.internal/ubuntu hirsute/main arm64 passwd arm64 1:4.8.1-1ubuntu8 [770 kB] Get:78 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 adduser all 3.118ubuntu5 [156 kB] Get:79 http://ftpmaster.internal/ubuntu hirsute/main arm64 systemd-timesyncd arm64 247.1-4ubuntu1 [26.4 kB] Get:80 http://ftpmaster.internal/ubuntu hirsute/main arm64 libapparmor1 arm64 3.0.0-0ubuntu5 [34.3 kB] Get:81 http://ftpmaster.internal/ubuntu hirsute/main arm64 libblkid1 arm64 2.36.1-1ubuntu2 [124 kB] Get:82 http://ftpmaster.internal/ubuntu hirsute/main arm64 libudev1 arm64 247.1-4ubuntu1 [63.3 kB] Get:83 http://ftpmaster.internal/ubuntu hirsute/main arm64 libdevmapper1.02.1 arm64 2:1.02.167-1ubuntu4 [110 kB] Get:84 http://ftpmaster.internal/ubuntu hirsute/main arm64 libuuid1 arm64 2.36.1-1ubuntu2 [21.0 kB] Get:85 http://ftpmaster.internal/ubuntu hirsute/main arm64 libcryptsetup12 arm64 2:2.3.4-1ubuntu1 [177 kB] Get:86 http://ftpmaster.internal/ubuntu hirsute/main arm64 libidn2-0 arm64 2.3.0-5 [51.3 kB] Get:87 http://ftpmaster.internal/ubuntu hirsute/main arm64 libp11-kit0 arm64 0.23.22-1 [183 kB] Get:88 http://ftpmaster.internal/ubuntu hirsute/main arm64 libgnutls30 arm64 3.7.0-5ubuntu1 [844 kB] Get:89 http://ftpmaster.internal/ubuntu hirsute/main arm64 libip4tc2 arm64 1.8.5-3ubuntu4 [18.2 kB] Get:90 http://ftpmaster.internal/ubuntu hirsute/main arm64 libseccomp2 arm64 2.4.3-1ubuntu6 [42.6 kB] Get:91 http://ftpmaster.internal/ubuntu hirsute/main arm64 mount arm64 2.36.1-1ubuntu2 [117 kB] Get:92 http://ftpmaster.internal/ubuntu hirsute/main arm64 systemd arm64 247.1-4ubuntu1 [3670 kB] Get:93 http://ftpmaster.internal/ubuntu hirsute/main arm64 libsystemd0 arm64 247.1-4ubuntu1 [254 kB] Get:94 http://ftpmaster.internal/ubuntu hirsute/main arm64 libapt-pkg6.0 arm64 2.1.18 [814 kB] Get:95 http://ftpmaster.internal/ubuntu hirsute/main arm64 apt arm64 2.1.18 [1268 kB] Get:96 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 init arm64 1.60 [6036 B] Get:97 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libacl1 arm64 2.2.53-9 [16.7 kB] Get:98 http://ftpmaster.internal/ubuntu hirsute/main arm64 libattr1 arm64 1:2.4.48-6 [12.6 kB] Get:99 http://ftpmaster.internal/ubuntu hirsute/main arm64 libmount1 arm64 2.36.1-1ubuntu2 [137 kB] Get:100 http://ftpmaster.internal/ubuntu hirsute/main arm64 libsmartcols1 arm64 2.36.1-1ubuntu2 [88.6 kB] Get:101 http://ftpmaster.internal/ubuntu hirsute/main arm64 sensible-utils all 0.0.14 [13.5 kB] Get:102 http://ftpmaster.internal/ubuntu hirsute/main arm64 libcap2 arm64 1:2.44-1 [16.7 kB] Get:103 http://ftpmaster.internal/ubuntu hirsute/main arm64 readline-common all 8.1-1 [54.1 kB] Get:104 http://ftpmaster.internal/ubuntu hirsute/main arm64 libreadline8 arm64 8.1-1 [129 kB] Get:105 http://ftpmaster.internal/ubuntu hirsute/main arm64 libsqlite3-0 arm64 3.34.0-1 [542 kB] Get:106 http://ftpmaster.internal/ubuntu hirsute/main arm64 openssl arm64 1.1.1f-1ubuntu5 [600 kB] Get:107 http://ftpmaster.internal/ubuntu hirsute/main arm64 tzdata all 2020f-1ubuntu2 [294 kB] Get:108 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 dpkg-dev all 1.20.7.1ubuntu1 [934 kB] Get:109 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libdpkg-perl all 1.20.7.1ubuntu1 [232 kB] Get:110 http://ftpmaster.internal/ubuntu hirsute/main arm64 patch arm64 2.7.6-7 [97.8 kB] Get:111 http://ftpmaster.internal/ubuntu hirsute/main arm64 libfakeroot arm64 1.25.3-1.1 [26.6 kB] Get:112 http://ftpmaster.internal/ubuntu hirsute/main arm64 fakeroot arm64 1.25.3-1.1 [62.4 kB] Get:113 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libassuan0 arm64 2.5.4-1 [33.2 kB] Get:114 http://ftpmaster.internal/ubuntu hirsute/main arm64 libnpth0 arm64 1.6-3 [7824 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 80.4 MB in 3s (23.5 MB/s) (Reading database ... 12970 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.17-1ubuntu1_arm64.deb ... Unpacking libcrypt-dev:arm64 (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Preparing to unpack .../libc6-dev_2.32-0ubuntu6_arm64.deb ... Unpacking libc6-dev:arm64 (2.32-0ubuntu6) over (2.32-0ubuntu3) ... Preparing to unpack .../libc-dev-bin_2.32-0ubuntu6_arm64.deb ... Unpacking libc-dev-bin (2.32-0ubuntu6) over (2.32-0ubuntu3) ... Preparing to unpack .../libcrypt1_1%3a4.4.17-1ubuntu1_arm64.deb ... Unpacking libcrypt1:arm64 (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Setting up libcrypt1:arm64 (1:4.4.17-1ubuntu1) ... (Reading database ... 12969 files and directories currently installed.) Preparing to unpack .../00-linux-libc-dev_5.10.0-12.13_arm64.deb ... Unpacking linux-libc-dev:arm64 (5.10.0-12.13) over (5.8.0-25.26) ... Preparing to unpack .../01-libtirpc-common_1.3.1-1_all.deb ... Unpacking libtirpc-common (1.3.1-1) over (1.2.6-1build1) ... 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Current default time zone: 'Etc/UTC' Local time is now: Sun Jan 17 23:35:15 UTC 2021. Universal Time is now: Sun Jan 17 23:35:15 UTC 2021. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.25.3-1.1) ... Setting up libncurses6:arm64 (6.2+20201114-2) ... Setting up libmpc3:arm64 (1.2.0-1) ... Setting up libatomic1:arm64 (10.2.1-6ubuntu1) ... Setting up patch (2.7.6-7) ... Setting up libncursesw6:arm64 (6.2+20201114-2) ... Setting up libk5crypto3:arm64 (1.17-10ubuntu1) ... Setting up libubsan1:arm64 (10.2.1-6ubuntu1) ... Setting up sensible-utils (0.0.14) ... Setting up libcrypt-dev:arm64 (1:4.4.17-1ubuntu1) ... Setting up libkrb5-3:arm64 (1.17-10ubuntu1) ... Setting up libbinutils:arm64 (2.35.90.20210113-1ubuntu1) ... Setting up libisl23:arm64 (0.23-1) ... Setting up libc-dev-bin (2.32-0ubuntu6) ... Setting up openssl (1.1.1f-1ubuntu5) ... Setting up readline-common (8.1-1) ... Setting up libcc1-0:arm64 (10.2.1-6ubuntu1) ... Setting up liblsan0:arm64 (10.2.1-6ubuntu1) ... Setting up cpp-10 (10.2.1-6ubuntu1) ... Setting up libitm1:arm64 (10.2.1-6ubuntu1) ... Setting up libgdbm6:arm64 (1.19-1) ... Setting up libtsan0:arm64 (10.2.1-6ubuntu1) ... Setting up libctf0:arm64 (2.35.90.20210113-1ubuntu1) ... Setting up libgcc-10-dev:arm64 (10.2.1-6ubuntu1) ... Setting up libreadline8:arm64 (8.1-1) ... Setting up binutils-aarch64-linux-gnu (2.35.90.20210113-1ubuntu1) ... Setting up binutils (2.35.90.20210113-1ubuntu1) ... Setting up libgssapi-krb5-2:arm64 (1.17-10ubuntu1) ... Setting up libgdbm-compat4:arm64 (1.19-1) ... Setting up libperl5.32:arm64 (5.32.0-6) ... Setting up gcc-10 (10.2.1-6ubuntu1) ... Setting up libtirpc3:arm64 (1.3.1-1) ... Setting up perl (5.32.0-6) ... Setting up libtirpc-dev:arm64 (1.3.1-1) ... Setting up libdpkg-perl (1.20.7.1ubuntu1) ... Setting up libc6-dev:arm64 (2.32-0ubuntu6) ... Setting up libstdc++-10-dev:arm64 (10.2.1-6ubuntu1) ... Setting up g++-10 (10.2.1-6ubuntu1) ... Setting up dpkg-dev (1.20.7.1ubuntu1) ... Processing triggers for libc-bin (2.32-0ubuntu6) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-20895226 arm64 hirsute-proposed -c chroot:build-PACKAGEBUILD-20895226 --arch=arm64 --dist=hirsute-proposed --nolog librcsb-core-wrapper_1.005-10.dsc Initiating build PACKAGEBUILD-20895226 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-130-generic #134-Ubuntu SMP Tue Jan 5 20:43:12 UTC 2021 aarch64 sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-arm64-052.buildd +==============================================================================+ | librcsb-core-wrapper 1.005-10 (arm64) Sun, 17 Jan 2021 23:35:17 +0000 | +==============================================================================+ Package: librcsb-core-wrapper Version: 1.005-10 Source Version: 1.005-10 Distribution: hirsute-proposed Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-20895226/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- librcsb-core-wrapper_1.005-10.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/librcsb-core-wrapper-djLew4/librcsb-core-wrapper-1.005' with '<>' I: NOTICE: Log filtering will replace 'build/librcsb-core-wrapper-djLew4' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-H3l6ZE/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-H3l6ZE/apt_archive ./ InRelease Get:2 copy:/<>/resolver-H3l6ZE/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-H3l6ZE/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-H3l6ZE/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-H3l6ZE/apt_archive ./ Packages [432 B] Fetched 1738 B in 0s (41.8 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-H3l6ZE/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (58.8 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14976 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), doxygen, graphviz, dh-python, libboost-python-dev, libxerces-c-dev, python3-all-dev, libtool, libtool-bin, bison, flex Filtered Build-Depends: debhelper-compat (= 13), doxygen, graphviz, dh-python, libboost-python-dev, libxerces-c-dev, python3-all-dev, libtool, libtool-bin, bison, flex dpkg-deb: building package 'sbuild-build-depends-librcsb-core-wrapper-dummy' in '/<>/resolver-H3l6ZE/apt_archive/sbuild-build-depends-librcsb-core-wrapper-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-librcsb-core-wrapper-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-H3l6ZE/apt_archive ./ InRelease Get:2 copy:/<>/resolver-H3l6ZE/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-H3l6ZE/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-H3l6ZE/apt_archive ./ Sources [565 B] Get:5 copy:/<>/resolver-H3l6ZE/apt_archive ./ Packages [645 B] Fetched 2173 B in 0s (51.9 kB/s) Reading package lists... Reading package lists... Install librcsb-core-wrapper build dependencies (apt-based resolver) -------------------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libisl22 libperl5.30 perl-modules-5.30 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bison bsdextrautils debhelper dh-autoreconf dh-python dh-strip-nondeterminism doxygen dwz file flex fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base icu-devtools intltool-debian libann0 libarchive-zip-perl libasn1-8-heimdal libboost-python-dev libboost-python1.74-dev libboost-python1.74.0 libboost1.74-dev libbrotli1 libbsd0 libcairo2 libcdt5 libcgraph6 libclang-cpp11 libclang1-11 libcurl3-gnutls libdatrie1 libdebhelper-perl libdeflate0 libedit2 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libglib2.0-0 libgraphite2-3 libgssapi3-heimdal libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu-dev libicu67 libjbig0 libjpeg-turbo8 libjpeg8 libkrb5-26-heimdal liblab-gamut1 libldap-2.4-2 libllvm11 libltdl7 libmagic-mgc libmagic1 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpsl5 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.9 libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh-4 libsub-override-perl libthai-data libthai0 libtiff5 libtool libtool-bin libuchardet0 libwebp6 libwind0-heimdal libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 m4 mailcap man-db media-types mime-support po-debconf python3 python3-all python3-all-dev python3-dev python3-distutils python3-lib2to3 python3-minimal python3.9 python3.9-dev python3.9-minimal ucf x11-common zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc bison-doc dh-make doxygen-latex doxygen-doc doxygen-gui flex-doc gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff libboost1.74-doc gccxml libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev libboost-context1.74-dev libboost-contract1.74-dev libboost-coroutine1.74-dev libboost-date-time1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev libboost-filesystem1.74-dev libboost-graph1.74-dev libboost-graph-parallel1.74-dev libboost-iostreams1.74-dev libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev libboost-program-options1.74-dev libboost-random1.74-dev libboost-regex1.74-dev libboost-serialization1.74-dev libboost-stacktrace1.74-dev libboost-system1.74-dev libboost-test1.74-dev libboost-thread1.74-dev libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev libgd-tools icu-doc libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools libxerces-c-doc m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.9-venv python3.9-doc binfmt-support Recommended packages: libfl-dev curl | wget | lynx fonts-liberation libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgts-bin libldap-common publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bison bsdextrautils debhelper dh-autoreconf dh-python dh-strip-nondeterminism doxygen dwz file flex fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base icu-devtools intltool-debian libann0 libarchive-zip-perl libasn1-8-heimdal libboost-python-dev libboost-python1.74-dev libboost-python1.74.0 libboost1.74-dev libbrotli1 libbsd0 libcairo2 libcdt5 libcgraph6 libclang-cpp11 libclang1-11 libcurl3-gnutls libdatrie1 libdebhelper-perl libdeflate0 libedit2 libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libglib2.0-0 libgraphite2-3 libgssapi3-heimdal libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu-dev libicu67 libjbig0 libjpeg-turbo8 libjpeg8 libkrb5-26-heimdal liblab-gamut1 libldap-2.4-2 libllvm11 libltdl7 libmagic-mgc libmagic1 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpsl5 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.9 libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh-4 libsub-override-perl libthai-data libthai0 libtiff5 libtool libtool-bin libuchardet0 libwebp6 libwind0-heimdal libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 m4 mailcap man-db media-types mime-support po-debconf python3 python3-all python3-all-dev python3-dev python3-distutils python3-lib2to3 python3-minimal python3.9 python3.9-dev python3.9-minimal sbuild-build-depends-librcsb-core-wrapper-dummy ucf x11-common zlib1g-dev 0 upgraded, 142 newly installed, 0 to remove and 0 not upgraded. Need to get 91.1 MB of archives. After this operation, 520 MB of additional disk space will be used. Get:1 copy:/<>/resolver-H3l6ZE/apt_archive ./ sbuild-build-depends-librcsb-core-wrapper-dummy 0.invalid.0 [932 B] Get:2 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libpython3.9-minimal arm64 3.9.1-2 [749 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute/main arm64 libexpat1 arm64 2.2.10-1 [61.9 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 python3.9-minimal arm64 3.9.1-2 [1833 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 python3-minimal arm64 3.9.1-1 [24.0 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main arm64 media-types all 4.0.0 [22.2 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/main arm64 mailcap all 3.68ubuntu1 [24.1 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main arm64 mime-support all 3.66 [3696 B] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libpython3.9-stdlib arm64 3.9.1-2 [1734 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 python3.9 arm64 3.9.1-2 [417 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libpython3-stdlib arm64 3.9.1-1 [7244 B] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 python3 arm64 3.9.1-1 [48.8 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute/main arm64 bsdextrautils arm64 2.36.1-1ubuntu2 [73.8 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main arm64 libuchardet0 arm64 0.0.7-1 [68.0 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute/main arm64 groff-base arm64 1.22.4-5 [797 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute/main arm64 libpipeline1 arm64 1.5.3-1 [26.1 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute/main arm64 man-db arm64 2.9.3-2 [1100 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute/main arm64 libsigsegv2 arm64 2.12-3 [13.8 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute/main arm64 m4 arm64 1.4.18-5 [194 kB] Get:20 http://ftpmaster.internal/ubuntu hirsute/main arm64 flex arm64 2.6.4-8 [287 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute/main arm64 libmagic-mgc arm64 1:5.39-3 [228 kB] Get:22 http://ftpmaster.internal/ubuntu hirsute/main arm64 libmagic1 arm64 1:5.39-3 [75.1 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute/main arm64 file arm64 1:5.39-3 [23.6 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main arm64 libbsd0 arm64 0.10.0-1 [43.7 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute/main arm64 libelf1 arm64 0.182-3 [43.4 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute/main arm64 libfribidi0 arm64 1.0.8-2 [23.7 kB] Get:27 http://ftpmaster.internal/ubuntu hirsute/main arm64 libglib2.0-0 arm64 2.66.4-1 [1217 kB] Get:28 http://ftpmaster.internal/ubuntu hirsute/main arm64 libicu67 arm64 67.1-5 [8457 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute/main arm64 libxml2 arm64 2.9.10+dfsg-6.3build1 [558 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main arm64 ucf all 3.0043 [56.1 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 gettext-base arm64 0.21-3ubuntu1 [38.8 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute/main arm64 libedit2 arm64 3.1-20191231-2 [83.2 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute/main arm64 libpsl5 arm64 0.21.0-1.1ubuntu1 [52.0 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute/main arm64 libxau6 arm64 1:1.0.9-0ubuntu1 [7356 B] Get:35 http://ftpmaster.internal/ubuntu hirsute/main arm64 libxdmcp6 arm64 1:1.1.3-0ubuntu1 [10.3 kB] Get:36 http://ftpmaster.internal/ubuntu hirsute/main arm64 libxcb1 arm64 1.14-2.1 [43.5 kB] Get:37 http://ftpmaster.internal/ubuntu hirsute/main arm64 libx11-data all 2:1.7.0-2 [112 kB] Get:38 http://ftpmaster.internal/ubuntu hirsute/main arm64 libx11-6 arm64 2:1.7.0-2 [552 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main arm64 libxext6 arm64 2:1.3.4-0ubuntu1 [27.7 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute/main arm64 autoconf all 2.69-14 [293 kB] Get:41 http://ftpmaster.internal/ubuntu hirsute/main arm64 autotools-dev all 20180224.1+nmu1 [39.4 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute/main arm64 automake all 1:1.16.3-2ubuntu1 [552 kB] Get:43 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 autopoint all 0.21-3ubuntu1 [423 kB] Get:44 http://ftpmaster.internal/ubuntu hirsute/main arm64 bison arm64 2:3.7.4+dfsg-1 [696 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute/main arm64 libtool all 2.4.6-15 [161 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute/main arm64 dh-autoreconf all 19 [16.1 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute/main arm64 libdebhelper-perl all 13.3.1ubuntu1 [62.2 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute/main arm64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute/main arm64 libsub-override-perl all 0.09-2 [9532 B] Get:50 http://ftpmaster.internal/ubuntu hirsute/main arm64 libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute/main arm64 dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:52 http://ftpmaster.internal/ubuntu hirsute/main arm64 dwz arm64 0.13+20201015-2 [153 kB] Get:53 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 gettext arm64 0.21-3ubuntu1 [775 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main arm64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:55 http://ftpmaster.internal/ubuntu hirsute/main arm64 po-debconf all 1.0.21+nmu1 [233 kB] Get:56 http://ftpmaster.internal/ubuntu hirsute/main arm64 debhelper all 13.3.1ubuntu1 [882 kB] Get:57 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 python3-lib2to3 all 3.9.1-1ubuntu1 [75.5 kB] Get:58 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 python3-distutils all 3.9.1-1ubuntu1 [140 kB] Get:59 http://ftpmaster.internal/ubuntu hirsute/universe arm64 dh-python all 4.20201102ubuntu4 [92.0 kB] Get:60 http://ftpmaster.internal/ubuntu hirsute/main arm64 libllvm11 arm64 1:11.0.1-2 [14.6 MB] Get:61 http://ftpmaster.internal/ubuntu hirsute/universe arm64 libclang-cpp11 arm64 1:11.0.1-2 [7886 kB] Get:62 http://ftpmaster.internal/ubuntu hirsute/universe arm64 libclang1-11 arm64 1:11.0.1-2 [4517 kB] Get:63 http://ftpmaster.internal/ubuntu hirsute/universe arm64 libxapian30 arm64 1.4.18-1 [585 kB] Get:64 http://ftpmaster.internal/ubuntu hirsute-proposed/universe arm64 doxygen arm64 1.9.1-1 [3597 kB] Get:65 http://ftpmaster.internal/ubuntu hirsute/main arm64 libbrotli1 arm64 1.0.9-2build2 [262 kB] Get:66 http://ftpmaster.internal/ubuntu hirsute/main arm64 libfreetype6 arm64 2.10.4+dfsg-1 [323 kB] Get:67 http://ftpmaster.internal/ubuntu hirsute/main arm64 fonts-dejavu-core all 2.37-2 [1041 kB] Get:68 http://ftpmaster.internal/ubuntu hirsute/main arm64 fontconfig-config all 2.13.1-4.2ubuntu2 [28.6 kB] Get:69 http://ftpmaster.internal/ubuntu hirsute/main arm64 libfontconfig1 arm64 2.13.1-4.2ubuntu2 [113 kB] Get:70 http://ftpmaster.internal/ubuntu hirsute/main arm64 fontconfig arm64 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[313 kB] Get:91 http://ftpmaster.internal/ubuntu hirsute/main arm64 libthai-data all 0.1.28-3 [134 kB] Get:92 http://ftpmaster.internal/ubuntu hirsute/main arm64 libdatrie1 arm64 0.2.12-3 [17.9 kB] Get:93 http://ftpmaster.internal/ubuntu hirsute/main arm64 libthai0 arm64 0.1.28-3 [16.8 kB] Get:94 http://ftpmaster.internal/ubuntu hirsute/main arm64 libpango-1.0-0 arm64 1.46.2-3 [160 kB] Get:95 http://ftpmaster.internal/ubuntu hirsute/main arm64 libpangoft2-1.0-0 arm64 1.46.2-3 [33.6 kB] Get:96 http://ftpmaster.internal/ubuntu hirsute/main arm64 libpangocairo-1.0-0 arm64 1.46.2-3 [22.8 kB] Get:97 http://ftpmaster.internal/ubuntu hirsute/universe arm64 libpathplan4 arm64 2.42.2-4build2 [20.4 kB] Get:98 http://ftpmaster.internal/ubuntu hirsute/universe arm64 libgvc6 arm64 2.42.2-4build2 [586 kB] Get:99 http://ftpmaster.internal/ubuntu hirsute/universe arm64 libgvpr2 arm64 2.42.2-4build2 [157 kB] Get:100 http://ftpmaster.internal/ubuntu hirsute/universe arm64 liblab-gamut1 arm64 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http://ftpmaster.internal/ubuntu hirsute/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-2ubuntu1 [14.9 kB] Get:130 http://ftpmaster.internal/ubuntu hirsute/main arm64 libsasl2-2 arm64 2.1.27+dfsg-2ubuntu1 [48.4 kB] Get:131 http://ftpmaster.internal/ubuntu hirsute/main arm64 libldap-2.4-2 arm64 2.4.56+dfsg-1ubuntu1 [145 kB] Get:132 http://ftpmaster.internal/ubuntu hirsute/main arm64 libnghttp2-14 arm64 1.42.0-1 [68.6 kB] Get:133 http://ftpmaster.internal/ubuntu hirsute/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2build2 [53.1 kB] Get:134 http://ftpmaster.internal/ubuntu hirsute/main arm64 libssh-4 arm64 0.9.5-1 [160 kB] Get:135 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libcurl3-gnutls arm64 7.74.0-1ubuntu1 [223 kB] Get:136 http://ftpmaster.internal/ubuntu hirsute/main arm64 libicu-dev arm64 67.1-5 [9459 kB] Get:137 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 libpython3-all-dev arm64 3.9.1-1 [1112 B] Get:138 http://ftpmaster.internal/ubuntu hirsute/main arm64 libtool-bin arm64 2.4.6-15 [80.3 kB] Get:139 http://ftpmaster.internal/ubuntu hirsute/universe arm64 libxerces-c3.2 arm64 3.2.3+debian-3 [763 kB] Get:140 http://ftpmaster.internal/ubuntu hirsute/universe arm64 libxerces-c-dev arm64 3.2.3+debian-3 [1625 kB] Get:141 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 python3-all arm64 3.9.1-1 [1104 B] Get:142 http://ftpmaster.internal/ubuntu hirsute-proposed/main arm64 python3-all-dev arm64 3.9.1-1 [1116 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 91.1 MB in 4s (25.8 MB/s) Selecting previously unselected package libpython3.9-minimal:arm64. (Reading database ... 14976 files and directories currently installed.) Preparing to unpack .../libpython3.9-minimal_3.9.1-2_arm64.deb ... Unpacking libpython3.9-minimal:arm64 (3.9.1-2) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.2.10-1_arm64.deb ... Unpacking libexpat1:arm64 (2.2.10-1) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../python3.9-minimal_3.9.1-2_arm64.deb ... Unpacking python3.9-minimal (3.9.1-2) ... Setting up libpython3.9-minimal:arm64 (3.9.1-2) ... Setting up libexpat1:arm64 (2.2.10-1) ... Setting up python3.9-minimal (3.9.1-2) ... Selecting previously unselected package python3-minimal. (Reading database ... 15269 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.1-1_arm64.deb ... Unpacking python3-minimal (3.9.1-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... 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Unpacking sbuild-build-depends-librcsb-core-wrapper-dummy (0.invalid.0) ... Setting up media-types (4.0.0) ... Setting up libpipeline1:arm64 (1.5.3-1) ... Setting up libgraphite2-3:arm64 (1.3.14-1) ... Setting up libpixman-1-0:arm64 (0.40.0-1) ... Setting up libxapian30:arm64 (1.4.18-1) ... Setting up libxau6:arm64 (1:1.0.9-0ubuntu1) ... Setting up libpsl5:arm64 (0.21.0-1.1ubuntu1) ... Setting up libboost1.74-dev:arm64 (1.74.0-3ubuntu2) ... Setting up bsdextrautils (2.36.1-1ubuntu2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:arm64 (67.1-5) ... Setting up libdatrie1:arm64 (0.2.12-3) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:arm64 (2.66.4-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.3.1ubuntu1) ... Setting up libbrotli1:arm64 (1.0.9-2build2) ... Setting up liblab-gamut1:arm64 (2.42.2-4build2) ... Setting up x11-common (1:7.7+19ubuntu15) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libnghttp2-14:arm64 (1.42.0-1) ... Setting up libmagic1:arm64 (1:5.39-3) ... Setting up libdeflate0:arm64 (1.7-1) ... Setting up gettext-base (0.21-3ubuntu1) ... Setting up file (1:5.39-3) ... Setting up libjbig0:arm64 (2.1-3.1build1) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-2ubuntu1) ... Setting up libgts-0.7-5:arm64 (0.7.6+darcs121130-4) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libexpat1-dev:arm64 (2.2.10-1) ... Setting up libfreetype6:arm64 (2.10.4+dfsg-1) ... Setting up libx11-data (2:1.7.0-2) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2build2) ... Setting up libpathplan4:arm64 (2.42.2-4build2) ... Setting up libann0 (1.1.2+doc-7build1) ... Setting up libsigsegv2:arm64 (2.12-3) ... Setting up libfribidi0:arm64 (1.0.8-2) ... Setting up autopoint (0.21-3ubuntu1) ... Setting up libwebp6:arm64 (0.6.1-2) ... Setting up icu-devtools (67.1-5) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up ucf (3.0043) ... Setting up libjpeg-turbo8:arm64 (2.0.3-0ubuntu2) ... Setting up libltdl7:arm64 (2.4.6-15) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-2ubuntu1) ... Setting up libssh-4:arm64 (0.9.5-1) ... Setting up libroken18-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-2ubuntu4) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libharfbuzz0b:arm64 (2.6.7-1ubuntu1) ... Setting up libthai-data (0.1.28-3) ... Setting up libcdt5:arm64 (2.42.2-4build2) ... Setting up libcgraph6:arm64 (2.42.2-4build2) ... Setting up libboost-python1.74.0 (1.74.0-3ubuntu2) ... Setting up libbsd0:arm64 (0.10.0-1) ... Setting up mailcap (3.68ubuntu1) ... Setting up libelf1:arm64 (0.182-3) ... Setting up libicu-dev:arm64 (67.1-5) ... Setting up libxml2:arm64 (2.9.10+dfsg-6.3build1) ... Setting up libpython3.9-stdlib:arm64 (3.9.1-2) ... Setting up libpython3-stdlib:arm64 (3.9.1-1) ... Setting up libheimbase1-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up libjpeg8:arm64 (8c-2ubuntu8) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libice6:arm64 (2:1.0.10-1) ... Setting up libxdmcp6:arm64 (1:1.1.3-0ubuntu1) ... Setting up libxcb1:arm64 (1.14-2.1) ... Setting up gettext (0.21-3ubuntu1) ... Setting up mime-support (3.66) ... Setting up libtool (2.4.6-15) ... Setting up libxcb-render0:arm64 (1.14-2.1) ... Setting up fontconfig-config (2.13.1-4.2ubuntu2) ... Setting up libasn1-8-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up libedit2:arm64 (3.1-20191231-2) ... Setting up m4 (1.4.18-5) ... Setting up libxcb-shm0:arm64 (1.14-2.1) ... Setting up libhcrypto4-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libthai0:arm64 (0.1.28-3) ... Setting up libwind0-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up libpython3.9:arm64 (3.9.1-2) ... Setting up libllvm11:arm64 (1:11.0.1-2) ... Setting up libclang1-11 (1:11.0.1-2) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up libgvpr2:arm64 (2.42.2-4build2) ... Setting up dwz (0.13+20201015-2) ... Setting up groff-base (1.22.4-5) ... Setting up bison (2:3.7.4+dfsg-1) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode Setting up libx11-6:arm64 (2:1.7.0-2) ... Setting up libtiff5:arm64 (4.2.0-1) ... Setting up libfontconfig1:arm64 (2.13.1-4.2ubuntu2) ... Setting up libsm6:arm64 (2:1.2.3-1) ... Setting up python3.9 (3.9.1-2) ... Setting up automake (1:1.16.3-2ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libtool-bin (2.4.6-15) ... Setting up fontconfig (2.13.1-4.2ubuntu2) ... Regenerating fonts cache... done. Setting up flex (2.6.4-8) ... Setting up libxpm4:arm64 (1:3.5.12-1) ... Setting up libxrender1:arm64 (1:0.9.10-1) ... Setting up libhx509-5-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpango-1.0-0:arm64 (1.46.2-3) ... Setting up libxext6:arm64 (2:1.3.4-0ubuntu1) ... Setting up libpython3.9-dev:arm64 (3.9.1-2) ... Setting up python3 (3.9.1-1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libcairo2:arm64 (1.16.0-5) ... Setting up libclang-cpp11 (1:11.0.1-2) ... Setting up doxygen (1.9.1-1) ... Setting up libgd3:arm64 (2.3.0-2) ... Setting up libxt6:arm64 (1:1.2.0-1) ... Setting up python3.9-dev (3.9.1-2) ... Setting up libpangoft2-1.0-0:arm64 (1.46.2-3) ... Setting up python3-lib2to3 (3.9.1-1ubuntu1) ... Setting up libpangocairo-1.0-0:arm64 (1.46.2-3) ... Setting up libkrb5-26-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up python3-distutils (3.9.1-1ubuntu1) ... Setting up dh-python (4.20201102ubuntu4) ... Setting up libxmu6:arm64 (2:1.1.3-0ubuntu1) ... Setting up libpython3-dev:arm64 (3.9.1-1) ... Setting up python3-all (3.9.1-1) ... Setting up libxaw7:arm64 (2:1.0.13-1.1) ... Setting up libheimntlm0-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up libgssapi3-heimdal:arm64 (7.7.0+dfsg-2) ... Setting up libpython3-all-dev:arm64 (3.9.1-1) ... Setting up python3-dev (3.9.1-1) ... Setting up libgvc6 (2.42.2-4build2) ... Setting up python3-all-dev (3.9.1-1) ... Setting up graphviz (2.42.2-4build2) ... Setting up libldap-2.4-2:arm64 (2.4.56+dfsg-1ubuntu1) ... Setting up libcurl3-gnutls:arm64 (7.74.0-1ubuntu1) ... Setting up libboost-python1.74-dev (1.74.0-3ubuntu2) ... Setting up libboost-python-dev (1.74.0.3ubuntu2) ... Setting up libxerces-c3.2:arm64 (3.2.3+debian-3) ... Setting up libxerces-c-dev:arm64 (3.2.3+debian-3) ... Setting up debhelper (13.3.1ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-librcsb-core-wrapper-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.32-0ubuntu6) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-130-generic arm64 (aarch64) Toolchain package versions: binutils_2.35.90.20210113-1ubuntu1 dpkg-dev_1.20.7.1ubuntu1 g++-10_10.2.1-6ubuntu1 gcc-10_10.2.1-6ubuntu1 libc6-dev_2.32-0ubuntu6 libstdc++-10-dev_10.2.1-6ubuntu1 libstdc++6_10.2.1-6ubuntu1 linux-libc-dev_5.10.0-12.13 Package versions: adduser_3.118ubuntu5 advancecomp_2.1-2.1build1 apt_2.1.18 autoconf_2.69-14 automake_1:1.16.3-2ubuntu1 autopoint_0.21-3ubuntu1 autotools-dev_20180224.1+nmu1 base-files_11ubuntu16 base-passwd_3.5.48 bash_5.1-1ubuntu1 binutils_2.35.90.20210113-1ubuntu1 binutils-aarch64-linux-gnu_2.35.90.20210113-1ubuntu1 binutils-common_2.35.90.20210113-1ubuntu1 bison_2:3.7.4+dfsg-1 bsdextrautils_2.36.1-1ubuntu2 bsdutils_1:2.36.1-1ubuntu2 build-essential_12.8ubuntu3 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librtmp1_2.4+20151223.gitfa8646d.1-2build2 libsasl2-2_2.1.27+dfsg-2ubuntu1 libsasl2-modules-db_2.1.27+dfsg-2ubuntu1 libseccomp2_2.4.3-1ubuntu6 libselinux1_3.1-2build2 libsemanage-common_3.1-1build2 libsemanage1_3.1-1build2 libsepol1_3.1-1 libsigsegv2_2.12-3 libsm6_2:1.2.3-1 libsmartcols1_2.36.1-1ubuntu2 libsqlite3-0_3.34.0-1 libss2_1.45.6-1ubuntu1 libssh-4_0.9.5-1 libssl1.1_1.1.1f-1ubuntu5 libstdc++-10-dev_10.2.1-6ubuntu1 libstdc++6_10.2.1-6ubuntu1 libsub-override-perl_0.09-2 libsystemd0_247.1-4ubuntu1 libtasn1-6_4.16.0-2 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.2.0-1 libtinfo6_6.2+20201114-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtool_2.4.6-15 libtool-bin_2.4.6-15 libtsan0_10.2.1-6ubuntu1 libubsan1_10.2.1-6ubuntu1 libuchardet0_0.0.7-1 libudev1_247.1-4ubuntu1 libunistring2_0.9.10-4 libuuid1_2.36.1-1ubuntu2 libwebp6_0.6.1-2 libwind0-heimdal_7.7.0+dfsg-2 libx11-6_2:1.7.0-2 libx11-data_2:1.7.0-2 libxapian30_1.4.18-1 libxau6_1:1.0.9-0ubuntu1 libxaw7_2:1.0.13-1.1 libxcb-render0_1.14-2.1 libxcb-shm0_1.14-2.1 libxcb1_1.14-2.1 libxdmcp6_1:1.1.3-0ubuntu1 libxerces-c-dev_3.2.3+debian-3 libxerces-c3.2_3.2.3+debian-3 libxext6_2:1.3.4-0ubuntu1 libxml2_2.9.10+dfsg-6.3build1 libxmu6_2:1.1.3-0ubuntu1 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.2.0-1 libxxhash0_0.8.0-2 libzstd1_1.4.8+dfsg-1 linux-libc-dev_5.10.0-12.13 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu8 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-5 mailcap_3.68ubuntu1 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 media-types_4.0.0 mime-support_3.66 mount_2.36.1-1ubuntu2 ncurses-base_6.2+20201114-2 ncurses-bin_6.2+20201114-2 openssl_1.1.1f-1ubuntu5 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu8 patch_2.7.6-7 perl_5.32.0-6 perl-base_5.32.0-6 perl-modules-5.30_5.30.3-4 perl-modules-5.32_5.32.0-6 pinentry-curses_1.1.0-4build1 pkgbinarymangler_146 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu2 python3_3.9.1-1 python3-all_3.9.1-1 python3-all-dev_3.9.1-1 python3-dev_3.9.1-1 python3-distutils_3.9.1-1ubuntu1 python3-lib2to3_3.9.1-1ubuntu1 python3-minimal_3.9.1-1 python3.9_3.9.1-2 python3.9-dev_3.9.1-2 python3.9-minimal_3.9.1-2 readline-common_8.1-1 rpcsvc-proto_1.4.2-0ubuntu4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-librcsb-core-wrapper-dummy_0.invalid.0 sed_4.7-1ubuntu1 sensible-utils_0.0.14 systemd_247.1-4ubuntu1 systemd-sysv_247.1-4ubuntu1 systemd-timesyncd_247.1-4ubuntu1 sysvinit-utils_2.96-5ubuntu1 tar_1.32+dfsg-1 tzdata_2020f-1ubuntu2 ubuntu-keyring_2020.06.17.1 ucf_3.0043 util-linux_2.36.1-1ubuntu2 x11-common_1:7.7+19ubuntu15 xz-utils_5.2.4-1ubuntu1 zlib1g_1:1.2.11.dfsg-2ubuntu4 zlib1g-dev_1:1.2.11.dfsg-2ubuntu4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Sun Jan 17 16:39:54 2021 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./librcsb-core-wrapper_1.005-10.dsc dpkg-source: info: extracting librcsb-core-wrapper in /<> dpkg-source: info: unpacking librcsb-core-wrapper_1.005.orig.tar.gz dpkg-source: info: unpacking librcsb-core-wrapper_1.005-10.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying wrapper-module dpkg-source: info: applying rm-duplicate-module dpkg-source: info: applying bash dpkg-source: info: applying unistd dpkg-source: info: applying devnull-log dpkg-source: info: applying docs dpkg-source: info: applying objectfiles dpkg-source: info: applying parallel-build dpkg-source: info: applying setup.py.in dpkg-source: info: applying hardening dpkg-source: info: applying spelling dpkg-source: info: applying exit-in-shlib dpkg-source: info: applying make_test_target dpkg-source: info: applying regcomp_cert_fix.patch dpkg-source: info: applying platformcheck.patch dpkg-source: info: applying xerces32.patch dpkg-source: info: applying gcc-8.patch dpkg-source: info: applying python3.patch dpkg-source: info: applying generated-includes dpkg-source: info: applying INSTALL-is-cifinstall.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-20895226 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-20895226 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-20895226 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package librcsb-core-wrapper dpkg-buildpackage: info: source version 1.005-10 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --with python3 debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j4 clean make[2]: Entering directory '/<>' rm -rf docs ------------------------------------------------------------ rm -rf rcsb **** Cleaning etc **** ------------------------------------------------------------ ------------------------------------------------------------ **** Cleaning common **** ------------------------------------------------------------ ------------------------------------------------------------ **** Cleaning test results in dict-obj-file **** ------------------------------------------------------------ make[3]: Entering directory '/<>/common' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Entering directory '/<>/dict-obj-file' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Leaving directory '/<>/dict-obj-file' ------------------------------------------------------------ **** Cleaning test results in pdbml-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/pdbml-parser' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Leaving directory '/<>/common' ------------------------------------------------------------ **** Cleaning tables **** ------------------------------------------------------------ make[3]: Entering directory '/<>/tables' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Leaving directory '/<>/pdbml-parser' make[3]: Leaving directory '/<>/tables' ------------------------------------------------------------ **** Cleaning regex **** ------------------------------------------------------------ make[3]: Entering directory '/<>/regex' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Leaving directory '/<>/regex' ------------------------------------------------------------ **** Cleaning cif-file **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-file' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Leaving directory '/<>/cif-file' ------------------------------------------------------------ **** Cleaning cif-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-parser' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Leaving directory '/<>/cif-parser' ------------------------------------------------------------ **** Cleaning cif-file-util **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-file-util' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Leaving directory '/<>/cif-file-util' ------------------------------------------------------------ **** Cleaning dict-obj-file **** ------------------------------------------------------------ make[3]: Entering directory '/<>/dict-obj-file' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Leaving directory '/<>/dict-obj-file' ------------------------------------------------------------ **** Cleaning pdbml-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/pdbml-parser' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Leaving directory '/<>/pdbml-parser' ------------------------------------------------------------ **** Cleaning cctbx **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cctbx' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[3]: Leaving directory '/<>/cctbx' make[2]: Leaving directory '/<>' rm -rf wrapper/python/build make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch --with python3 dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j4 "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>' sh -c '\ export PIC=-fPIC; \ export WWPDB_XERCESC_INC=/usr/include; \ export WWPDB_XERCESC_LIB_DIR=/usr/lib; \ export WWPDB_XERCESC_LIB=xerces-c; \ ( cd ./util; ./compile.sh ); \ libtool --mode=link g++ -version-info 0:1:0 -rpath /usr/lib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -l${WWPDB_XERCESC_LIB} -o lib/librcsb-core-wrapper.la lib/*.lo' ------------------------------------------------------------ **** Making etc **** ------------------------------------------------------------ Using platform specific configuration for system: gnu4 Platform configuration done. ------------------------------------------------------------ **** Making common **** ------------------------------------------------------------ make[3]: Entering directory '/<>/common' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbPlatform.C -o ./obj/RcsbPlatform.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbFile.C -o ./obj/RcsbFile.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/BlockIO.C -o ./obj/BlockIO.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Serializer.C -o ./obj/Serializer.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/BlockIO.C -fPIC -DPIC -o ./obj/.libs/BlockIO.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Serializer.C -fPIC -DPIC -o ./obj/.libs/Serializer.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbFile.C -fPIC -DPIC -o ./obj/.libs/RcsbFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbPlatform.C -fPIC -DPIC -o ./obj/.libs/RcsbPlatform.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbPlatform.C -o ./obj/RcsbPlatform.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenString.C -o ./obj/GenString.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenString.C -fPIC -DPIC -o ./obj/.libs/GenString.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/BlockIO.C -o ./obj/BlockIO.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/RcsbFile.C -o ./obj/RcsbFile.o >/dev/null 2>&1 src/GenString.C: In static member function ‘static bool String::IsNumber(const string&)’: src/GenString.C:539:12: warning: catching polymorphic type ‘class std::exception’ by value [-Wcatch-value=] 539 | catch (exception) | ^~~~~~~~~ libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifString.C -o ./obj/CifString.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifString.C -fPIC -DPIC -o ./obj/.libs/CifString.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenCont.C -o ./obj/GenCont.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenCont.C -fPIC -DPIC -o ./obj/.libs/GenCont.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenString.C -o ./obj/GenString.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifString.C -o ./obj/CifString.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/GenCont.C -o ./obj/GenCont.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Exceptions.C -o ./obj/Exceptions.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Exceptions.C -fPIC -DPIC -o ./obj/.libs/Exceptions.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Serializer.C -o ./obj/Serializer.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DataInfo.C -o ./obj/DataInfo.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DataInfo.C -fPIC -DPIC -o ./obj/.libs/DataInfo.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_vector.C -o ./obj/mapped_vector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_vector.C -fPIC -DPIC -o ./obj/.libs/mapped_vector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/Exceptions.C -o ./obj/Exceptions.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_vector.C -o ./obj/mapped_vector.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_ptr_vector.C -o ./obj/mapped_ptr_vector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_ptr_vector.C -fPIC -DPIC -o ./obj/.libs/mapped_ptr_vector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/mapped_ptr_vector.C -o ./obj/mapped_ptr_vector.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DataInfo.C -o ./obj/DataInfo.o >/dev/null 2>&1 a - RcsbPlatform.o a - RcsbFile.o a - BlockIO.o a - Serializer.o a - GenString.o a - CifString.o a - GenCont.o a - Exceptions.o a - DataInfo.o a - mapped_vector.o a - mapped_ptr_vector.o cp -f -t ../lib ./obj/RcsbPlatform.o ./obj/RcsbFile.o ./obj/BlockIO.o ./obj/Serializer.o ./obj/GenString.o ./obj/CifString.o ./obj/GenCont.o ./obj/Exceptions.o ./obj/DataInfo.o ./obj/mapped_vector.o ./obj/mapped_ptr_vector.o ./obj/RcsbPlatform.lo ./obj/RcsbFile.lo ./obj/BlockIO.lo ./obj/Serializer.lo ./obj/GenString.lo ./obj/CifString.lo ./obj/GenCont.lo ./obj/Exceptions.lo ./obj/DataInfo.lo ./obj/mapped_vector.lo ./obj/mapped_ptr_vector.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/RcsbPlatform.o ./obj/.libs/RcsbFile.o ./obj/.libs/BlockIO.o ./obj/.libs/Serializer.o ./obj/.libs/GenString.o ./obj/.libs/CifString.o ./obj/.libs/GenCont.o ./obj/.libs/Exceptions.o ./obj/.libs/DataInfo.o ./obj/.libs/mapped_vector.o ./obj/.libs/mapped_ptr_vector.o true lib/common.a lib/common.a is up to date. ../etc/cifinstall -m 0444 ./lib/common.a ../lib x - RcsbPlatform.o x - RcsbFile.o x - BlockIO.o x - Serializer.o x - GenString.o x - CifString.o x - GenCont.o x - Exceptions.o x - DataInfo.o x - mapped_vector.o x - mapped_ptr_vector.o x - RcsbPlatform.o x - RcsbFile.o x - BlockIO.o x - Serializer.o x - GenString.o x - CifString.o x - GenCont.o x - Exceptions.o x - DataInfo.o x - mapped_vector.o x - mapped_ptr_vector.o a - BlockIO.o a - CifString.o a - DataInfo.o a - Exceptions.o a - GenCont.o a - GenString.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - mapped_ptr_vector.o a - mapped_vector.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib make[3]: Leaving directory '/<>/common' ------------------------------------------------------------ **** Making tables **** ------------------------------------------------------------ make[3]: Entering directory '/<>/tables' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TTable.C -o ./obj/TTable.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ITTable.C -o ./obj/ITTable.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ISTable.C -o ./obj/ISTable.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TableFile.C -o ./obj/TableFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ITTable.C -fPIC -DPIC -o ./obj/.libs/ITTable.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TTable.C -fPIC -DPIC -o ./obj/.libs/TTable.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TableFile.C -fPIC -DPIC -o ./obj/.libs/TableFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ISTable.C -fPIC -DPIC -o ./obj/.libs/ISTable.o src/ITTable.C: In member function ‘void ITTable::AppendToColumn(unsigned int, const string&)’: src/ITTable.C:169:16: warning: catching polymorphic type ‘class AlreadyExistsException’ by value [-Wcatch-value=] 169 | catch (AlreadyExistsException) | ^~~~~~~~~~~~~~~~~~~~~~ src/ITTable.C: In member function ‘void ITTable::ClearColumn(unsigned int)’: src/ITTable.C:244:12: warning: catching polymorphic type ‘class AlreadyExistsException’ by value [-Wcatch-value=] 244 | catch (AlreadyExistsException) | ^~~~~~~~~~~~~~~~~~~~~~ src/TableFile.C: In member function ‘std::string TableFile::GetFirstBlockName()’: src/TableFile.C:474:12: warning: catching polymorphic type ‘class std::out_of_range’ by value [-Wcatch-value=] 474 | catch (out_of_range) | ^~~~~~~~~~~~ src/ITTable.C: In member function ‘unsigned int ITTable::InsertRow(unsigned int, const std::vector >&)’: src/ITTable.C:326:16: warning: catching polymorphic type ‘class AlreadyExistsException’ by value [-Wcatch-value=] 326 | catch (AlreadyExistsException) | ^~~~~~~~~~~~~~~~~~~~~~ src/ITTable.C: In member function ‘void ITTable::FillRow(unsigned int, const std::vector >&)’: src/ITTable.C:362:12: warning: catching polymorphic type ‘class AlreadyExistsException’ by value [-Wcatch-value=] 362 | catch (AlreadyExistsException) | ^~~~~~~~~~~~~~~~~~~~~~ src/ITTable.C: In member function ‘void ITTable::ClearRow(unsigned int)’: src/ITTable.C:439:12: warning: catching polymorphic type ‘class AlreadyExistsException’ by value [-Wcatch-value=] 439 | catch (AlreadyExistsException) | ^~~~~~~~~~~~~~~~~~~~~~ src/ITTable.C: In member function ‘void ITTable::FillColumn(unsigned int, std::vector >::const_iterator, std::vector >::const_iterator)’: src/ITTable.C:1645:12: warning: catching polymorphic type ‘class AlreadyExistsException’ by value [-Wcatch-value=] 1645 | catch (AlreadyExistsException) | ^~~~~~~~~~~~~~~~~~~~~~ src/ITTable.C: In member function ‘void ITTable::AppendToColumn(unsigned int, const std::vector >&)’: src/ITTable.C:1714:16: warning: catching polymorphic type ‘class AlreadyExistsException’ by value [-Wcatch-value=] 1714 | catch (AlreadyExistsException) | ^~~~~~~~~~~~~~~~~~~~~~ src/ITTable.C: In member function ‘int ITTable::UpdateCell(const string&, unsigned int, unsigned int)’: src/ITTable.C:1759:12: warning: catching polymorphic type ‘class AlreadyExistsException’ by value [-Wcatch-value=] 1759 | catch (AlreadyExistsException) | ^~~~~~~~~~~~~~~~~~~~~~ src/ISTable.C: In member function ‘bool ISTable::IsColumnPresent(const string&)’: src/ISTable.C:228:12: warning: catching polymorphic type ‘class NotFoundException’ by value [-Wcatch-value=] 228 | catch (NotFoundException) | ^~~~~~~~~~~~~~~~~ src/ISTable.C: In member function ‘unsigned int ISTable::InsertRow(unsigned int, const std::vector >&)’: src/ISTable.C:649:20: warning: catching polymorphic type ‘class AlreadyExistsException’ by value [-Wcatch-value=] 649 | catch (AlreadyExistsException) | ^~~~~~~~~~~~~~~~~~~~~~ src/ISTable.C: In function ‘std::ostream& operator<<(std::ostream&, const ISTable&)’: src/ISTable.C:1826:20: warning: catching polymorphic type ‘class std::out_of_range’ by value [-Wcatch-value=] 1826 | catch (out_of_range) | ^~~~~~~~~~~~ libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TTable.C -o ./obj/TTable.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/TableFile.C -o ./obj/TableFile.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ITTable.C -o ./obj/ITTable.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ISTable.C -o ./obj/ISTable.o >/dev/null 2>&1 a - TTable.o a - ITTable.o a - ISTable.o a - TableFile.o cp -f -t ../lib ./obj/TTable.o ./obj/ITTable.o ./obj/ISTable.o ./obj/TableFile.o ./obj/TTable.lo ./obj/ITTable.lo ./obj/ISTable.lo ./obj/TableFile.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/TTable.o ./obj/.libs/ITTable.o ./obj/.libs/ISTable.o ./obj/.libs/TableFile.o true lib/tables.a lib/tables.a is up to date. ../etc/cifinstall -m 0444 ./lib/tables.a ../lib x - BlockIO.o x - CifString.o x - DataInfo.o x - Exceptions.o x - GenCont.o x - GenString.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - mapped_ptr_vector.o x - mapped_vector.o x - TTable.o x - ITTable.o x - ISTable.o x - TableFile.o a - BlockIO.o a - CifString.o a - DataInfo.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib make[3]: Leaving directory '/<>/tables' ------------------------------------------------------------ **** Making regex **** ------------------------------------------------------------ make[3]: Entering directory '/<>/regex' libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regcomp.c -o ./obj/regcomp.o libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regexec.c -o ./obj/regexec.o libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regerror.c -o ./obj/regerror.o libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regfree.c -o ./obj/regfree.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regexec.c -fPIC -DPIC -o ./obj/.libs/regexec.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regcomp.c -fPIC -DPIC -o ./obj/.libs/regcomp.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regerror.c -fPIC -DPIC -o ./obj/.libs/regerror.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regfree.c -fPIC -DPIC -o ./obj/.libs/regfree.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regfree.c -o ./obj/regfree.o >/dev/null 2>&1 libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regerror.c -o ./obj/regerror.o >/dev/null 2>&1 libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regcomp.c -o ./obj/regcomp.o >/dev/null 2>&1 libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -DPOSIX_MISTAKE -c src/regexec.c -o ./obj/regexec.o >/dev/null 2>&1 a - regcomp.o a - regexec.o a - regerror.o a - regfree.o cp -f -t ../lib ./obj/regcomp.o ./obj/regexec.o ./obj/regerror.o ./obj/regfree.o ./obj/regcomp.lo ./obj/regexec.lo ./obj/regerror.lo ./obj/regfree.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/regcomp.o ./obj/.libs/regexec.o ./obj/.libs/regerror.o ./obj/.libs/regfree.o true lib/regex.a lib/regex.a is up to date. ../etc/cifinstall -m 0444 ./lib/regex.a ../lib x - BlockIO.o x - CifString.o x - DataInfo.o x - Exceptions.o x - GenCont.o x - GenString.o x - ISTable.o x - ITTable.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - TTable.o x - TableFile.o x - mapped_ptr_vector.o x - mapped_vector.o x - regcomp.o x - regexec.o x - regerror.o x - regfree.o a - BlockIO.o a - CifString.o a - DataInfo.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o a - regcomp.o a - regerror.o a - regexec.o a - regfree.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib make[3]: Leaving directory '/<>/regex' ------------------------------------------------------------ **** Making cif-file **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-file' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFile.C -o ./obj/CifFile.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DicFile.C -o ./obj/DicFile.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ParentChild.C -o ./obj/ParentChild.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParentChild.C -o ./obj/CifParentChild.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ParentChild.C -fPIC -DPIC -o ./obj/.libs/ParentChild.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DicFile.C -fPIC -DPIC -o ./obj/.libs/DicFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFile.C -fPIC -DPIC -o ./obj/.libs/CifFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParentChild.C -fPIC -DPIC -o ./obj/.libs/CifParentChild.o src/CifFile.C: In member function ‘int CifFile::CheckCellRange(const string&, const string&, const std::vector >&, const std::vector >&)’: src/CifFile.C:2503:12: warning: catching polymorphic type ‘class std::exception’ by value [-Wcatch-value=] 2503 | catch (exception) | ^~~~~~~~~ libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DicFile.C -o ./obj/DicFile.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParentChild.C -o ./obj/CifParentChild.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/ParentChild.C -o ./obj/ParentChild.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFile.C -o ./obj/CifFile.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifDataInfo.C -o ./obj/CifDataInfo.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifDataInfo.C -fPIC -DPIC -o ./obj/.libs/CifDataInfo.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifExcept.C -o ./obj/CifExcept.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifExcept.C -fPIC -DPIC -o ./obj/.libs/CifExcept.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifDataInfo.C -o ./obj/CifDataInfo.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifExcept.C -o ./obj/CifExcept.o >/dev/null 2>&1 a - CifFile.o a - DicFile.o a - ParentChild.o a - CifParentChild.o a - CifDataInfo.o a - CifExcept.o cp -f -t ../lib ./obj/CifFile.o ./obj/DicFile.o ./obj/ParentChild.o ./obj/CifParentChild.o ./obj/CifDataInfo.o ./obj/CifExcept.o ./obj/CifFile.lo ./obj/DicFile.lo ./obj/ParentChild.lo ./obj/CifParentChild.lo ./obj/CifDataInfo.lo ./obj/CifExcept.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/CifFile.o ./obj/.libs/DicFile.o ./obj/.libs/ParentChild.o ./obj/.libs/CifParentChild.o ./obj/.libs/CifDataInfo.o ./obj/.libs/CifExcept.o true lib/cif-file.a lib/cif-file.a is up to date. ../etc/cifinstall -m 0444 ./lib/cif-file.a ../lib x - BlockIO.o x - CifString.o x - DataInfo.o x - Exceptions.o x - GenCont.o x - GenString.o x - ISTable.o x - ITTable.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - TTable.o x - TableFile.o x - mapped_ptr_vector.o x - mapped_vector.o x - regcomp.o x - regerror.o x - regexec.o x - regfree.o x - CifFile.o x - DicFile.o x - ParentChild.o x - CifParentChild.o x - CifDataInfo.o x - CifExcept.o a - BlockIO.o a - CifDataInfo.o a - CifExcept.o a - CifFile.o a - CifParentChild.o a - CifString.o a - DataInfo.o a - DicFile.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - ParentChild.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o a - regcomp.o a - regerror.o a - regexec.o a - regfree.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib make[3]: Leaving directory '/<>/cif-file' ------------------------------------------------------------ **** Making cif-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-parser' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFileReadDef.C -o ./obj/CifFileReadDef.o sh -c 'cd ./src; bison -d -v -l -p cifparser_ ../src/CifParser.y' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParserBase.C -o ./obj/CifParserBase.o sh -c 'cd ./src; bison -d -v -l -p dicparser_ ../src/DICParser.y' mv src/CifParser.tab.c src/CifParser.c mv src/CifParser.tab.h src/CifParser.h sed -i -e's/\.tab\.h/\.h/' src/CifParser.c libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParser.c -o obj/CifParser.o mv src/DICParser.tab.c src/DICParser.c libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFileReadDef.C -fPIC -DPIC -o ./obj/.libs/CifFileReadDef.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParserBase.C -fPIC -DPIC -o ./obj/.libs/CifParserBase.o mv src/DICParser.tab.h src/DICParser.h sed -i -e's/\.tab\.h/\.h/' src/DICParser.c libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICParser.c -o obj/DICParser.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParser.c -fPIC -DPIC -o obj/.libs/CifParser.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICParser.c -fPIC -DPIC -o obj/.libs/DICParser.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParser.c -o obj/CifParser.o >/dev/null 2>&1 libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICParser.c -o obj/DICParser.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICParserBase.C -o ./obj/DICParserBase.o flex -Cfr -L -Pcifparser_ -t ./src/CifScanner.l > ./src/CifScanner.c libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c ./src/CifScanner.c -o ./obj/CifScanner.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICParserBase.C -fPIC -DPIC -o ./obj/.libs/DICParserBase.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c ./src/CifScanner.c -fPIC -DPIC -o ./obj/.libs/CifScanner.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c ./src/CifScanner.c -o ./obj/CifScanner.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFileReadDef.C -o ./obj/CifFileReadDef.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifScannerBase.C -o ./obj/CifScannerBase.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifScannerBase.C -fPIC -DPIC -o ./obj/.libs/CifScannerBase.o flex -Cfr -L -Pdicparser_ -t ./src/DICScanner.l > ./src/DICScanner.c libtool --mode=compile gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c ./src/DICScanner.c -o ./obj/DICScanner.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c ./src/DICScanner.c -fPIC -DPIC -o ./obj/.libs/DICScanner.o libtool: compile: gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c ./src/DICScanner.c -o ./obj/DICScanner.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifParserBase.C -o ./obj/CifParserBase.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICScannerBase.C -o ./obj/DICScannerBase.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifScannerBase.C -o ./obj/CifScannerBase.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICScannerBase.C -fPIC -DPIC -o ./obj/.libs/DICScannerBase.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICScannerBase.C -o ./obj/DICScannerBase.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DICParserBase.C -o ./obj/DICParserBase.o >/dev/null 2>&1 a - CifFileReadDef.o a - CifScanner.o a - CifScannerBase.o a - CifParser.o a - CifParserBase.o a - DICScanner.o a - DICScannerBase.o a - DICParser.o a - DICParserBase.o cp -f -t ../lib ./obj/CifFileReadDef.o ./obj/CifScanner.o ./obj/CifScannerBase.o ./obj/CifParser.o ./obj/CifParserBase.o ./obj/DICScanner.o ./obj/DICScannerBase.o ./obj/DICParser.o ./obj/DICParserBase.o ./obj/CifFileReadDef.lo ./obj/CifScanner.lo ./obj/CifScannerBase.lo ./obj/CifParser.lo ./obj/CifParserBase.lo ./obj/DICScanner.lo ./obj/DICScannerBase.lo ./obj/DICParser.lo ./obj/DICParserBase.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/CifFileReadDef.o ./obj/.libs/CifScanner.o ./obj/.libs/CifScannerBase.o ./obj/.libs/CifParser.o ./obj/.libs/CifParserBase.o ./obj/.libs/DICScanner.o ./obj/.libs/DICScannerBase.o ./obj/.libs/DICParser.o ./obj/.libs/DICParserBase.o true lib/cifparse-obj.a lib/cifparse-obj.a is up to date. ../etc/cifinstall -m 0444 ./lib/cifparse-obj.a ../lib x - BlockIO.o x - CifDataInfo.o x - CifExcept.o x - CifFile.o x - CifParentChild.o x - CifString.o x - DataInfo.o x - DicFile.o x - Exceptions.o x - GenCont.o x - GenString.o x - ISTable.o x - ITTable.o x - ParentChild.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - TTable.o x - TableFile.o x - mapped_ptr_vector.o x - mapped_vector.o x - regcomp.o x - regerror.o x - regexec.o x - regfree.o x - CifFileReadDef.o x - CifScanner.o x - CifScannerBase.o x - CifParser.o x - CifParserBase.o x - DICScanner.o x - DICScannerBase.o x - DICParser.o x - DICParserBase.o a - BlockIO.o a - CifDataInfo.o a - CifExcept.o a - CifFile.o a - CifFileReadDef.o a - CifParentChild.o a - CifParser.o a - CifParserBase.o a - CifScanner.o a - CifScannerBase.o a - CifString.o a - DICParser.o a - DICParserBase.o a - DICScanner.o a - DICScannerBase.o a - DataInfo.o a - DicFile.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - ParentChild.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o a - regcomp.o a - regerror.o a - regexec.o a - regfree.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib rm src/DICParser.h src/CifParser.h make[3]: Leaving directory '/<>/cif-parser' ------------------------------------------------------------ **** Making cif-file-util **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cif-file-util' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFileUtil.C -o ./obj/CifFileUtil.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifCorrector.C -o ./obj/CifCorrector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFileUtil.C -fPIC -DPIC -o ./obj/.libs/CifFileUtil.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifCorrector.C -fPIC -DPIC -o ./obj/.libs/CifCorrector.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifFileUtil.C -o ./obj/CifFileUtil.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/CifCorrector.C -o ./obj/CifCorrector.o >/dev/null 2>&1 a - CifFileUtil.o a - CifCorrector.o cp -f -t ../lib ./obj/CifFileUtil.o ./obj/CifCorrector.o ./obj/CifFileUtil.lo ./obj/CifCorrector.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/CifFileUtil.o ./obj/.libs/CifCorrector.o true lib/cif-file-util.a lib/cif-file-util.a is up to date. ../etc/cifinstall -m 0444 ./lib/cif-file-util.a ../lib x - BlockIO.o x - CifDataInfo.o x - CifExcept.o x - CifFile.o x - CifFileReadDef.o x - CifParentChild.o x - CifParser.o x - CifParserBase.o x - CifScanner.o x - CifScannerBase.o x - CifString.o x - DICParser.o x - DICParserBase.o x - DICScanner.o x - DICScannerBase.o x - DataInfo.o x - DicFile.o x - Exceptions.o x - GenCont.o x - GenString.o x - ISTable.o x - ITTable.o x - ParentChild.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - TTable.o x - TableFile.o x - mapped_ptr_vector.o x - mapped_vector.o x - regcomp.o x - regerror.o x - regexec.o x - regfree.o x - CifFileUtil.o x - CifCorrector.o a - BlockIO.o a - CifCorrector.o a - CifDataInfo.o a - CifExcept.o a - CifFile.o a - CifFileReadDef.o a - CifFileUtil.o a - CifParentChild.o a - CifParser.o a - CifParserBase.o a - CifScanner.o a - CifScannerBase.o a - CifString.o a - DICParser.o a - DICParserBase.o a - DICScanner.o a - DICScannerBase.o a - DataInfo.o a - DicFile.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - ParentChild.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o a - regcomp.o a - regerror.o a - regexec.o a - regfree.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib make[3]: Leaving directory '/<>/cif-file-util' ------------------------------------------------------------ **** Making dict-obj-file **** ------------------------------------------------------------ make[3]: Entering directory '/<>/dict-obj-file' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjContInfo.C -o ./obj/DictObjContInfo.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjCont.C -o ./obj/DictObjCont.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjFile.C -o ./obj/DictObjFile.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictDataInfo.C -o ./obj/DictDataInfo.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjContInfo.C -fPIC -DPIC -o ./obj/.libs/DictObjContInfo.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjFile.C -fPIC -DPIC -o ./obj/.libs/DictObjFile.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjCont.C -fPIC -DPIC -o ./obj/.libs/DictObjCont.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictDataInfo.C -fPIC -DPIC -o ./obj/.libs/DictDataInfo.o src/DictObjCont.C: In member function ‘void DictObjCont::PrintContainers(const string&, const string&, const ObjContInfo&)’: src/DictObjCont.C:640:16: warning: catching polymorphic type ‘class NotFoundException’ by value [-Wcatch-value=] 640 | catch (NotFoundException) | ^~~~~~~~~~~~~~~~~ libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictDataInfo.C -o ./obj/DictDataInfo.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjFile.C -o ./obj/DictObjFile.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjContInfo.C -o ./obj/DictObjContInfo.o >/dev/null 2>&1 libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictParentChild.C -o ./obj/DictParentChild.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictParentChild.C -fPIC -DPIC -o ./obj/.libs/DictParentChild.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjCont.C -o ./obj/DictObjCont.o >/dev/null 2>&1 g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjFileCreator.C -o obj/DictObjFileCreator.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictParentChild.C -o ./obj/DictParentChild.o >/dev/null 2>&1 g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjFileReader.C -o obj/DictObjFileReader.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -c src/DictObjFileSelectiveReader.C -o obj/DictObjFileSelectiveReader.o a - DictObjContInfo.o a - DictObjCont.o a - DictObjFile.o a - DictDataInfo.o a - DictParentChild.o cp -f -t ../lib ./obj/DictObjContInfo.o ./obj/DictObjCont.o ./obj/DictObjFile.o ./obj/DictDataInfo.o ./obj/DictParentChild.o ./obj/DictObjContInfo.lo ./obj/DictObjCont.lo ./obj/DictObjFile.lo ./obj/DictDataInfo.lo ./obj/DictParentChild.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/DictObjContInfo.o ./obj/.libs/DictObjCont.o ./obj/.libs/DictObjFile.o ./obj/.libs/DictDataInfo.o ./obj/.libs/DictParentChild.o true lib/dict-obj-file.a lib/dict-obj-file.a is up to date. ../etc/cifinstall -m 0444 ./lib/dict-obj-file.a ../lib x - BlockIO.o x - CifCorrector.o x - CifDataInfo.o x - CifExcept.o x - CifFile.o x - CifFileReadDef.o x - CifFileUtil.o x - CifParentChild.o x - CifParser.o x - CifParserBase.o x - CifScanner.o x - CifScannerBase.o x - CifString.o x - DICParser.o x - DICParserBase.o x - DICScanner.o x - DICScannerBase.o x - DataInfo.o x - DicFile.o x - Exceptions.o x - GenCont.o x - GenString.o x - ISTable.o x - ITTable.o x - ParentChild.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - TTable.o x - TableFile.o x - mapped_ptr_vector.o x - mapped_vector.o x - regcomp.o x - regerror.o x - regexec.o x - regfree.o x - DictObjContInfo.o x - DictObjCont.o x - DictObjFile.o x - DictDataInfo.o x - DictParentChild.o a - BlockIO.o a - CifCorrector.o a - CifDataInfo.o a - CifExcept.o a - CifFile.o a - CifFileReadDef.o a - CifFileUtil.o a - CifParentChild.o a - CifParser.o a - CifParserBase.o a - CifScanner.o a - CifScannerBase.o a - CifString.o a - DICParser.o a - DICParserBase.o a - DICScanner.o a - DICScannerBase.o a - DataInfo.o a - DicFile.o a - DictDataInfo.o a - DictObjCont.o a - DictObjContInfo.o a - DictObjFile.o a - DictParentChild.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - ParentChild.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o a - regcomp.o a - regerror.o a - regexec.o a - regfree.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -w -static obj/DictObjFileCreator.o ../lib/dict-obj-file.a ../lib/cif-file-util.a ../lib/cif-file.a ../lib/cifparse-obj.a ../lib/tables.a ../lib/common.a ../lib/regex.a -lm -o ./bin/DictObjFileCreator g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -w -static obj/DictObjFileReader.o ../lib/dict-obj-file.a ../lib/cif-file-util.a ../lib/cif-file.a ../lib/cifparse-obj.a ../lib/tables.a ../lib/common.a ../lib/regex.a -lm -o ./bin/DictObjFileReader g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -w -static obj/DictObjFileSelectiveReader.o ../lib/dict-obj-file.a ../lib/cif-file-util.a ../lib/cif-file.a ../lib/cifparse-obj.a ../lib/tables.a ../lib/common.a ../lib/regex.a -lm -o ./bin/DictObjFileSelectiveReader make[3]: Leaving directory '/<>/dict-obj-file' ------------------------------------------------------------ **** Making pdbml-parser **** ------------------------------------------------------------ make[3]: Entering directory '/<>/pdbml-parser' libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/PdbMlFileUtil.C -o ./obj/PdbMlFileUtil.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/PdbMlParserHandler.C -o ./obj/PdbMlParserHandler.o libtool --mode=compile g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/misc_util.C -o ./obj/misc_util.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/xml2mmcif.C -o obj/xml2mmcif.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/PdbMlParserHandler.C -fPIC -DPIC -o ./obj/.libs/PdbMlParserHandler.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/PdbMlFileUtil.C -fPIC -DPIC -o ./obj/.libs/PdbMlFileUtil.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/misc_util.C -fPIC -DPIC -o ./obj/.libs/misc_util.o libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/PdbMlFileUtil.C -o ./obj/PdbMlFileUtil.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/misc_util.C -o ./obj/misc_util.o >/dev/null 2>&1 libtool: compile: g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -fPIC -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I/usr/include -c src/PdbMlParserHandler.C -o ./obj/PdbMlParserHandler.o >/dev/null 2>&1 a - PdbMlFileUtil.o a - PdbMlParserHandler.o a - misc_util.o cp -f -t ../lib ./obj/PdbMlFileUtil.o ./obj/PdbMlParserHandler.o ./obj/misc_util.o ./obj/PdbMlFileUtil.lo ./obj/PdbMlParserHandler.lo ./obj/misc_util.lo mkdir -p ../lib/.libs && cp -f -t ../lib/.libs ./obj/.libs/PdbMlFileUtil.o ./obj/.libs/PdbMlParserHandler.o ./obj/.libs/misc_util.o true lib/pdbml-parser.a lib/pdbml-parser.a is up to date. ../etc/cifinstall -m 0444 ./lib/pdbml-parser.a ../lib x - BlockIO.o x - CifCorrector.o x - CifDataInfo.o x - CifExcept.o x - CifFile.o x - CifFileReadDef.o x - CifFileUtil.o x - CifParentChild.o x - CifParser.o x - CifParserBase.o x - CifScanner.o x - CifScannerBase.o x - CifString.o x - DICParser.o x - DICParserBase.o x - DICScanner.o x - DICScannerBase.o x - DataInfo.o x - DicFile.o x - DictDataInfo.o x - DictObjCont.o x - DictObjContInfo.o x - DictObjFile.o x - DictParentChild.o x - Exceptions.o x - GenCont.o x - GenString.o x - ISTable.o x - ITTable.o x - ParentChild.o x - RcsbFile.o x - RcsbPlatform.o x - Serializer.o x - TTable.o x - TableFile.o x - mapped_ptr_vector.o x - mapped_vector.o x - regcomp.o x - regerror.o x - regexec.o x - regfree.o x - PdbMlFileUtil.o x - PdbMlParserHandler.o x - misc_util.o a - BlockIO.o a - CifCorrector.o a - CifDataInfo.o a - CifExcept.o a - CifFile.o a - CifFileReadDef.o a - CifFileUtil.o a - CifParentChild.o a - CifParser.o a - CifParserBase.o a - CifScanner.o a - CifScannerBase.o a - CifString.o a - DICParser.o a - DICParserBase.o a - DICScanner.o a - DICScannerBase.o a - DataInfo.o a - DicFile.o a - DictDataInfo.o a - DictObjCont.o a - DictObjContInfo.o a - DictObjFile.o a - DictParentChild.o a - Exceptions.o a - GenCont.o a - GenString.o a - ISTable.o a - ITTable.o a - ParentChild.o a - PdbMlFileUtil.o a - PdbMlParserHandler.o a - RcsbFile.o a - RcsbPlatform.o a - Serializer.o a - TTable.o a - TableFile.o a - mapped_ptr_vector.o a - mapped_vector.o a - misc_util.o a - regcomp.o a - regerror.o a - regexec.o a - regfree.o ../etc/cifinstall -m 0444 ./lib/all.a ../lib g++ -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -w -L/usr/lib obj/xml2mmcif.o ../lib/pdbml-parser.a ../lib/dict-obj-file.a ../lib/cif-file-util.a ../lib/cif-file.a ../lib/cifparse-obj.a ../lib/tables.a ../lib/common.a ../lib/regex.a -lxerces-c -lm -o ./bin/xml2mmcif make[3]: Leaving directory '/<>/pdbml-parser' ------------------------------------------------------------ **** Making cctbx **** ------------------------------------------------------------ make[3]: Entering directory '/<>/cctbx' make[3]: Leaving directory '/<>/cctbx' libtool: link: g++ -fPIC -DPIC -shared lib/.libs/BlockIO.o lib/.libs/CifCorrector.o lib/.libs/CifDataInfo.o lib/.libs/CifExcept.o lib/.libs/CifFile.o lib/.libs/CifFileReadDef.o lib/.libs/CifFileUtil.o lib/.libs/CifParentChild.o lib/.libs/CifParser.o lib/.libs/CifParserBase.o lib/.libs/CifScanner.o lib/.libs/CifScannerBase.o lib/.libs/CifString.o lib/.libs/DICParser.o lib/.libs/DICParserBase.o lib/.libs/DICScanner.o lib/.libs/DICScannerBase.o lib/.libs/DataInfo.o lib/.libs/DicFile.o lib/.libs/DictDataInfo.o lib/.libs/DictObjCont.o lib/.libs/DictObjContInfo.o lib/.libs/DictObjFile.o lib/.libs/DictParentChild.o lib/.libs/Exceptions.o lib/.libs/GenCont.o lib/.libs/GenString.o lib/.libs/ISTable.o lib/.libs/ITTable.o lib/.libs/ParentChild.o lib/.libs/PdbMlFileUtil.o lib/.libs/PdbMlParserHandler.o lib/.libs/RcsbFile.o lib/.libs/RcsbPlatform.o lib/.libs/Serializer.o lib/.libs/TTable.o lib/.libs/TableFile.o lib/.libs/mapped_ptr_vector.o lib/.libs/mapped_vector.o lib/.libs/misc_util.o lib/.libs/regcomp.o lib/.libs/regerror.o lib/.libs/regexec.o lib/.libs/regfree.o -lxerces-c -lstdc++ -lm -lc -lgcc_s -g -O2 -fstack-protector-strong -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,--as-needed -Wl,-soname -Wl,librcsb-core-wrapper.so.0 -o lib/.libs/librcsb-core-wrapper.so.0.0.1 libtool: link: (cd "lib/.libs" && rm -f "librcsb-core-wrapper.so.0" && ln -s "librcsb-core-wrapper.so.0.0.1" "librcsb-core-wrapper.so.0") libtool: link: (cd "lib/.libs" && rm -f "librcsb-core-wrapper.so" && ln -s "librcsb-core-wrapper.so.0.0.1" "librcsb-core-wrapper.so") libtool: link: ar cr lib/.libs/librcsb-core-wrapper.a lib/BlockIO.o lib/CifCorrector.o lib/CifDataInfo.o lib/CifExcept.o lib/CifFile.o lib/CifFileReadDef.o lib/CifFileUtil.o lib/CifParentChild.o lib/CifParser.o lib/CifParserBase.o lib/CifScanner.o lib/CifScannerBase.o lib/CifString.o lib/DICParser.o lib/DICParserBase.o lib/DICScanner.o lib/DICScannerBase.o lib/DataInfo.o lib/DicFile.o lib/DictDataInfo.o lib/DictObjCont.o lib/DictObjContInfo.o lib/DictObjFile.o lib/DictParentChild.o lib/Exceptions.o lib/GenCont.o lib/GenString.o lib/ISTable.o lib/ITTable.o lib/ParentChild.o lib/PdbMlFileUtil.o lib/PdbMlParserHandler.o lib/RcsbFile.o lib/RcsbPlatform.o lib/Serializer.o lib/TTable.o lib/TableFile.o lib/mapped_ptr_vector.o lib/mapped_vector.o lib/misc_util.o lib/regcomp.o lib/regerror.o lib/regexec.o lib/regfree.o libtool: link: ranlib lib/.libs/librcsb-core-wrapper.a libtool: link: ( cd "lib/.libs" && rm -f "librcsb-core-wrapper.la" && ln -s "../librcsb-core-wrapper.la" "librcsb-core-wrapper.la" ) cd wrapper && make OPT=-O make[3]: Entering directory '/<>/wrapper' sed -e 's!@C++FLAGS@!-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O -std=c++11 -Wall -Wno-deprecated -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW -I./include -I../include -I -I !g; s!@DEFINES@! -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW !g; s!@EXT_COMP_OPT@!-ftemplate-depth-128 -fno-inline -Wall!; s!@EXT_LIBS_DIRS@!-L -L -L!g; s!@EXT_LIBS@!-l -l -l!g;' < "python/setup.py.in" > "python/setup.py" ln -sf ../src python/src make[3]: Leaving directory '/<>/wrapper' make[2]: Leaving directory '/<>' /usr/bin/make doc make[2]: Entering directory '/<>' rm -rf rcsb && cp -r include rcsb grep -lr '^#include "' rcsb | xargs sed -i -e '/^#include "/{ s/#include "\([^"]\+\)"/#include /; }' mkdir -p docs/doxyfiles echo PROJECT_NAME = librcsb-core-wrapper > docs/doxyfiles/Doxyfile echo PROJECT_NUMBER = 1.005 >> docs/doxyfiles/Doxyfile echo OUTPUT_DIRECTORY = docs >> docs/doxyfiles/Doxyfile echo INPUT = rcsb >> docs/doxyfiles/Doxyfile cat etc/Doxyfile-template >> docs/doxyfiles/Doxyfile doxygen docs/doxyfiles/Doxyfile warning: Tag 'USE_WINDOWS_ENCODING' at line 75 of file 'docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DETAILS_AT_TOP' at line 177 of file 'docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SHOW_DIRECTORIES' at line 411 of file 'docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 677 of file 'docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_ALIGN_MEMBERS' at line 732 of file 'docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_SCHEMA' at line 964 of file 'docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_DTD' at line 970 of file 'docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 1131 of file 'docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MAX_DOT_GRAPH_WIDTH' at line 1246 of file 'docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MAX_DOT_GRAPH_HEIGHT' at line 1254 of file 'docs/doxyfiles/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! make[2]: Leaving directory '/<>' dh_auto_build --sourcedirectory=wrapper/python --buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_ext building 'CorePyWrap' extension creating build creating build/temp.linux-arm64-3.9 creating build/temp.linux-arm64-3.9/src aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/CharPyWrap.C -o build/temp.linux-arm64-3.9/src/CharPyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/CharPyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/CifDataInfoPyWrap.C -o build/temp.linux-arm64-3.9/src/CifDataInfoPyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/CifDataInfoPyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/CifFilePyWrap.C -o build/temp.linux-arm64-3.9/src/CifFilePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/CifFilePyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ src/CifFilePyWrap.C: In function ‘void InitCifFilePyWrapper()’: src/CifFilePyWrap.C:168:40: warning: typedef ‘GetAttributeValue_function_type’ locally defined but not used [-Wunused-local-typedefs] 168 | typedef void ( ::CifFile::*GetAttributeValue_function_type )( ::std::string &,::std::string const &,::std::string const &,::std::string const & ) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/CifFilePyWrap.C:182:40: warning: typedef ‘GetAttributeValueIf_function_type’ locally defined but not used [-Wunused-local-typedefs] 182 | typedef void ( ::CifFile::*GetAttributeValueIf_function_type )( ::std::string &,::std::string const &,::std::string const &,::std::string const &,::std::string const &,::std::string const & ) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/CifFilePyWrap.C:196:40: warning: typedef ‘GetAttributeValues_function_type’ locally defined but not used [-Wunused-local-typedefs] 196 | typedef void ( ::CifFile::*GetAttributeValues_function_type )( ::std::vector< std::string > &,::std::string const &,::std::string const &,::std::string const & ) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/CifFilePyWrap.C:210:40: warning: typedef ‘GetAttributeValuesIf_function_type’ locally defined but not used [-Wunused-local-typedefs] 210 | typedef void ( ::CifFile::*GetAttributeValuesIf_function_type )( ::std::vector< std::string > &,::std::string const &,::std::string const &,::std::string const &,::std::string const &,::std::string const & ) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/CorePyWrap.C -o build/temp.linux-arm64-3.9/src/CorePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/CorePyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/DataInfoPyWrap.C -o build/temp.linux-arm64-3.9/src/DataInfoPyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/DataInfoPyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/DicFilePyWrap.C -o build/temp.linux-arm64-3.9/src/DicFilePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/DicFilePyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/DictDataInfoPyWrap.C -o build/temp.linux-arm64-3.9/src/DictDataInfoPyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/DictDataInfoPyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/DictObjFilePyWrap.C -o build/temp.linux-arm64-3.9/src/DictObjFilePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/DictObjFilePyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/ISTablePyWrap.C -o build/temp.linux-arm64-3.9/src/ISTablePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/ISTablePyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ src/ISTablePyWrap.C: In function ‘void InitISTablePyWrapper()’: src/ISTablePyWrap.C:205:40: warning: typedef ‘Search_function_type’ locally defined but not used [-Wunused-local-typedefs] 205 | typedef void ( ::ISTable::*Search_function_type )( ::std::vector< unsigned int > &,::std::vector< std::string > const &,::std::vector< std::string > const &,unsigned int const,::ITTable::eSearchDir const,::ITTable::eSearchType const,::std::string const & ) ; | ^~~~~~~~~~~~~~~~~~~~ src/ISTablePyWrap.C:245:40: warning: typedef ‘GetColumn_function_type’ locally defined but not used [-Wunused-local-typedefs] 245 | typedef void ( ::ISTable::*GetColumn_function_type )( ::std::vector< std::string > &,::std::string const & ) ; | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/PdbMlFilePyWrap.C -o build/temp.linux-arm64-3.9/src/PdbMlFilePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/PdbMlFilePyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/RcsbFilePyWrap.C -o build/temp.linux-arm64-3.9/src/RcsbFilePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/RcsbFilePyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/StlPyWrap.C -o build/temp.linux-arm64-3.9/src/StlPyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/StlPyWrap.C:34: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/TableFilePyWrap.C -o build/temp.linux-arm64-3.9/src/TableFilePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/TableFilePyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../../include -I/usr/include/python3.9 -c src/TypeCodePyWrap.C -o build/temp.linux-arm64-3.9/src/TypeCodePyWrap.o -DHAVE_STRCASECMP -DINCL_TEMPLATE_SRC -DHAVE_PLACEMENT_NEW In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from src/TypeCodePyWrap.C:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.9/src/CharPyWrap.o build/temp.linux-arm64-3.9/src/CifDataInfoPyWrap.o build/temp.linux-arm64-3.9/src/CifFilePyWrap.o build/temp.linux-arm64-3.9/src/CorePyWrap.o build/temp.linux-arm64-3.9/src/DataInfoPyWrap.o build/temp.linux-arm64-3.9/src/DicFilePyWrap.o build/temp.linux-arm64-3.9/src/DictDataInfoPyWrap.o build/temp.linux-arm64-3.9/src/DictObjFilePyWrap.o build/temp.linux-arm64-3.9/src/ISTablePyWrap.o build/temp.linux-arm64-3.9/src/PdbMlFilePyWrap.o build/temp.linux-arm64-3.9/src/RcsbFilePyWrap.o build/temp.linux-arm64-3.9/src/StlPyWrap.o build/temp.linux-arm64-3.9/src/TableFilePyWrap.o build/temp.linux-arm64-3.9/src/TypeCodePyWrap.o -L../../lib/.libs -lrcsb-core-wrapper -lboost_python39 -o /<>/.pybuild/cpython3_3.9/build/CorePyWrap.cpython-39-aarch64-linux-gnu.so dh override_dh_auto_build --with python3 make[1]: Leaving directory '/<>' dh_auto_test -a make -j4 test make[1]: Entering directory '/<>' ------- compile targets are compile_lnx_38, compile_lnx_41, compile_wwpdb_py27 and compile_osx ------- ------------------------------------------------------------ **** Testing dict-obj-file **** ------------------------------------------------------------ make[2]: Entering directory '/<>/dict-obj-file' make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. Creating mmCIF/DDL object dictionary DictObjFileCreator Version 8.0 Dictionary SDB filename: ./mmcif_std.sdb Object filename: ./mmcif_std.odb Number of dictionary datablocks: 1 Building dictionary object: mmcif_std.dic Writing dictionary object: mmcif_std.dic Last index = 19806 Return code = 0 Running reading test 1 Running reading test 2 Tests execution time is 2 seconds. make[2]: Leaving directory '/<>/dict-obj-file' ------------------------------------------------------------ **** Testing pdbml-parser **** ------------------------------------------------------------ make[2]: Entering directory '/<>/pdbml-parser' make[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. /<>/pdbml-parser/test/1ysh.xml Saving 1 columns and 5 rows in table audit_author Saving 19 columns and 1 rows in table pdbx_database_status Saving 5 columns and 1 rows in table database_PDB_rev Saving 7 columns and 3 rows in table struct_ref Saving 11 columns and 3 rows in table struct_ref_seq Saving 12 columns and 3 rows in table struct_ref_seq_dif Saving 3 columns and 1 rows in table struct_keywords Saving 3 columns and 1 rows in table em_assembly Saving 3 columns and 1 rows in table em_sample_preparation Saving 2 columns and 1 rows in table em_sample_support Saving 3 columns and 1 rows in table em_vitrification Saving 2 columns and 1 rows in table symmetry Saving 21 columns and 1 rows in table em_imaging Saving 3 columns and 1 rows in table em_detector Saving 3 columns and 1 rows in table refine Saving 4 columns and 1 rows in table em_3d_reconstruction Saving 13 columns and 1 rows in table database_PDB_matrix Saving 2 columns and 1 rows in table database_PDB_remark Saving 3 columns and 1 rows in table em_2d_projection_selection Saving 3 columns and 1 rows in table em_image_scans Saving 1 columns and 1 rows in table entry Saving 2 columns and 1 rows in table exptl Saving 2 columns and 9 rows in table ndb_struct_conf_na Saving 24 columns and 65 rows in table ndb_struct_na_base_pair Saving 43 columns and 59 rows in table ndb_struct_na_base_pair_step Saving 3 columns and 3 rows in table pdbx_entity_name Saving 3 columns and 1 rows in table software Saving 13 columns and 1 rows in table atom_sites Saving 11 columns and 1 rows in table citation Saving 2 columns and 1 rows in table computing Saving 2 columns and 3 rows in table database_2 Saving 6 columns and 6 rows in table entity Saving 3 columns and 424 rows in table entity_poly_seq Saving 6 columns and 6 rows in table entity_poly Saving 8 columns and 3 rows in table entity_src_nat Saving 10 columns and 424 rows in table pdbx_poly_seq_scheme Saving 8 columns and 1 rows in table refine_hist Saving 3 columns and 1 rows in table struct Saving 4 columns and 6 rows in table struct_asym Saving 4 columns and 6 rows in table struct_biol_gen Saving 17 columns and 11 rows in table struct_conf Saving 19 columns and 186 rows in table struct_conn Saving 2 columns and 1 rows in table struct_conn_type Saving 2 columns and 2 rows in table struct_sheet Saving 4 columns and 5 rows in table struct_sheet_order Saving 14 columns and 7 rows in table struct_sheet_range Saving 19 columns and 5 rows in table pdbx_struct_sheet_hbond Saving 1 columns and 5 rows in table atom_type Saving 6 columns and 24 rows in table chem_comp Saving 3 columns and 5 rows in table citation_author Saving 3 columns and 2 rows in table audit_conform Saving 3 columns and 1 rows in table audit Saving 2 columns and 1 rows in table pdbx_audit Saving 19 columns and 5576 rows in table atom_site /<>/pdbml-parser/test/1ysh.xml Tests execution time is 1 seconds. make[2]: Leaving directory '/<>/pdbml-parser' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' # lkajan: there is no real install mechanism in the upstream sources dh_auto_install --sourcedirectory=wrapper/python --buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py install --root /<>/debian/tmp running install running build running build_ext running install_lib creating /<>/debian/tmp/usr creating /<>/debian/tmp/usr/lib creating /<>/debian/tmp/usr/lib/python3.9 creating /<>/debian/tmp/usr/lib/python3.9/dist-packages copying /<>/.pybuild/cpython3_3.9/build/CorePyWrap.cpython-39-aarch64-linux-gnu.so -> /<>/debian/tmp/usr/lib/python3.9/dist-packages running install_egg_info Writing /<>/debian/tmp/usr/lib/python3.9/dist-packages/python_corepywrap-1.000.egg-info dh override_dh_auto_install --with python3 make[1]: Leaving directory '/<>' dh_install -a debian/rules override_dh_installdocs make[1]: Entering directory '/<>' dh_installdocs find debian -name "*.md5" -delete make[1]: Leaving directory '/<>' dh_installchangelogs -a dh_installexamples -a dh_python3 -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a -a dh_strip -a -a debian/rules override_dh_makeshlibs make[1]: Entering directory '/<>' dh_makeshlibs -V make[1]: Leaving directory '/<>' dh_shlibdeps -a -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package python3-corepywrap: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-corepywrap: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 pkgstriptranslations: processing librcsb-core-wrapper0 (in debian/librcsb-core-wrapper0); do_strip: , oemstrip: pkgstriptranslations: processing librcsb-core-wrapper0-dev (in debian/librcsb-core-wrapper0-dev); do_strip: , oemstrip: pkgstriptranslations: processing python3-corepywrap-dbgsym (in debian/.debhelper/python3-corepywrap/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/librcsb-core-wrapper0/DEBIAN/control, package librcsb-core-wrapper0, directory debian/librcsb-core-wrapper0 pkgstripfiles: processing control file: debian/librcsb-core-wrapper0-dev/DEBIAN/control, package librcsb-core-wrapper0-dev, directory debian/librcsb-core-wrapper0-dev INFO: pkgstripfiles: waiting for lock (librcsb-core-wrapper0-dev) ... pkgstripfiles: Truncating usr/share/doc/librcsb-core-wrapper0/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package librcsb-core-wrapper0 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'librcsb-core-wrapper0' in '../librcsb-core-wrapper0_1.005-10_arm64.deb'. Searching for duplicated docs in dependency librcsb-core-wrapper0... symlinking changelog.Debian.gz in librcsb-core-wrapper0-dev to file in librcsb-core-wrapper0 pkgstripfiles: Running PNG optimization (using 4 cpus) for package librcsb-core-wrapper0-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'librcsb-core-wrapper0-dev' in '../librcsb-core-wrapper0-dev_1.005-10_arm64.deb'. INFO: pkgstriptranslations version 146 pkgstriptranslations: processing librcsb-core-wrapper0-dbgsym (in debian/.debhelper/librcsb-core-wrapper0/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/librcsb-core-wrapper0/dbgsym-root/DEBIAN/control, package librcsb-core-wrapper0-dbgsym, directory debian/.debhelper/librcsb-core-wrapper0/dbgsym-root dpkg-deb: building package 'librcsb-core-wrapper0-dbgsym' in 'debian/.debhelper/scratch-space/build-librcsb-core-wrapper0/librcsb-core-wrapper0-dbgsym_1.005-10_arm64.deb'. INFO: pkgstriptranslations version 146 pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstriptranslations: processing python3-corepywrap (in debian/python3-corepywrap); do_strip: , oemstrip: pkgstripfiles: processing control file: debian/.debhelper/python3-corepywrap/dbgsym-root/DEBIAN/control, package python3-corepywrap-dbgsym, directory debian/.debhelper/python3-corepywrap/dbgsym-root dpkg-deb: building package 'python3-corepywrap-dbgsym' in 'debian/.debhelper/scratch-space/build-python3-corepywrap/python3-corepywrap-dbgsym_1.005-10_arm64.deb'. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python3-corepywrap/DEBIAN/control, package python3-corepywrap, directory debian/python3-corepywrap Searching for duplicated docs in dependency librcsb-core-wrapper0... symlinking changelog.Debian.gz in python3-corepywrap to file in librcsb-core-wrapper0 pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-corepywrap ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-corepywrap' in '../python3-corepywrap_1.005-10_arm64.deb'. Renaming librcsb-core-wrapper0-dbgsym_1.005-10_arm64.deb to librcsb-core-wrapper0-dbgsym_1.005-10_arm64.ddeb Renaming python3-corepywrap-dbgsym_1.005-10_arm64.deb to python3-corepywrap-dbgsym_1.005-10_arm64.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../librcsb-core-wrapper_1.005-10_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-01-17T23:43:40Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ librcsb-core-wrapper_1.005-10_arm64.changes: -------------------------------------------- Format: 1.8 Date: Sun, 17 Jan 2021 11:54:01 +0200 Source: librcsb-core-wrapper Binary: librcsb-core-wrapper0 librcsb-core-wrapper0-dev python3-corepywrap Architecture: arm64 Version: 1.005-10 Distribution: hirsute-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Juhani Numminen Description: librcsb-core-wrapper0 - C++ library providing OO API to information in mmCIF format librcsb-core-wrapper0-dev - development files for librcsb-core-wrapper0 python3-corepywrap - library that exports C++ mmCIF accessors to Python3 Changes: librcsb-core-wrapper (1.005-10) unstable; urgency=medium . * Team upload * Add autopkgtest-pkg-python.conf with the correct import_name * debhelper-compat 13 - Add INSTALL-is-cifinstall.patch allowing us to use compat >= 11 Checksums-Sha1: 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librcsb-core-wrapper0_1.005-10_arm64.deb e47a8fe191d538367e1d29e19d97bba19d914833 3365124 python3-corepywrap-dbgsym_1.005-10_arm64.ddeb 577fb66b1b06c9087c5cc5f296f91a175edfb2ea 195332 python3-corepywrap_1.005-10_arm64.deb Checksums-Sha256: 64cb5b3a6c9036c377b3b58dbd6b15b0976538ea0242fcf6fd09c93e734c6fe9 4751844 librcsb-core-wrapper0-dbgsym_1.005-10_arm64.ddeb 22b7e7d51e1371615eb4cd7241e6c13bffdf413b8db5736e3187c33fe3292266 355636 librcsb-core-wrapper0-dev_1.005-10_arm64.deb 3adb4ddd21236c063583f2aaec0b9fefd02949850f361bc90eba13b49417d99b 263892 librcsb-core-wrapper0_1.005-10_arm64.deb 48b36930aaeee1504154e62ae1b101feb8d2f9f79526325d2fbf372c130d451c 3365124 python3-corepywrap-dbgsym_1.005-10_arm64.ddeb 82781799518e759daccdcbd5a843ae00389bf720e98eaa5fce7b6f16e3b616c5 195332 python3-corepywrap_1.005-10_arm64.deb Build-Origin: Ubuntu Build-Architecture: arm64 Build-Date: Sun, 17 Jan 2021 23:43:38 +0000 Build-Path: /<> Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.69-14), automake (= 1:1.16.3-2ubuntu1), autopoint (= 0.21-3ubuntu1), autotools-dev (= 20180224.1+nmu1), base-files (= 11ubuntu16), base-passwd (= 3.5.48), bash (= 5.1-1ubuntu1), binutils (= 2.35.90.20210113-1ubuntu1), binutils-aarch64-linux-gnu (= 2.35.90.20210113-1ubuntu1), binutils-common (= 2.35.90.20210113-1ubuntu1), bison (= 2:3.7.4+dfsg-1), bsdextrautils (= 2.36.1-1ubuntu2), bsdutils (= 1:2.36.1-1ubuntu2), build-essential (= 12.8ubuntu3), bzip2 (= 1.0.8-4ubuntu2), coreutils (= 8.32-4ubuntu2), cpp (= 4:10.2.0-1ubuntu1), cpp-10 (= 10.2.1-6ubuntu1), dash (= 0.5.11+git20200708+dd9ef66+really0.5.11+git20200708+dd9ef66-5ubuntu1), debconf (= 1.5.74), debhelper (= 13.3.1ubuntu1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-python (= 4.20201102ubuntu4), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3ubuntu1), doxygen (= 1.9.1-1), dpkg (= 1.20.7.1ubuntu1), dpkg-dev (= 1.20.7.1ubuntu1), dwz (= 0.13+20201015-2), file (= 1:5.39-3), findutils (= 4.7.0-1ubuntu2), 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2.3.0-5), libisl23 (= 0.23-1), libitm1 (= 10.2.1-6ubuntu1), libjbig0 (= 2.1-3.1build1), libjpeg-turbo8 (= 2.0.3-0ubuntu2), libjpeg8 (= 8c-2ubuntu8), libk5crypto3 (= 1.17-10ubuntu1), libkeyutils1 (= 1.6.1-2ubuntu1), libkrb5-26-heimdal (= 7.7.0+dfsg-2), libkrb5-3 (= 1.17-10ubuntu1), libkrb5support0 (= 1.17-10ubuntu1), liblab-gamut1 (= 2.42.2-4build2), libldap-2.4-2 (= 2.4.56+dfsg-1ubuntu1), libllvm11 (= 1:11.0.1-2), liblsan0 (= 10.2.1-6ubuntu1), libltdl7 (= 2.4.6-15), liblz4-1 (= 1.9.3-0ubuntu1), liblzma5 (= 5.2.4-1ubuntu1), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmount1 (= 2.36.1-1ubuntu2), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libncursesw6 (= 6.2+20201114-2), libnettle8 (= 3.6-2), libnghttp2-14 (= 1.42.0-1), libnsl-dev (= 1.3.0-0ubuntu3), libnsl2 (= 1.3.0-0ubuntu3), libp11-kit0 (= 0.23.22-1), libpam-modules (= 1.3.1-5ubuntu6), libpam-modules-bin (= 1.3.1-5ubuntu6), libpam-runtime (= 1.3.1-5ubuntu6), libpam0g (= 1.3.1-5ubuntu6), libpango-1.0-0 (= 1.46.2-3), 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1:0.9.10-1), libxt6 (= 1:1.2.0-1), libzstd1 (= 1.4.8+dfsg-1), linux-libc-dev (= 5.10.0-12.13), login (= 1:4.8.1-1ubuntu8), lsb-base (= 11.1.0ubuntu2), m4 (= 1.4.18-5), mailcap (= 3.68ubuntu1), make (= 4.3-4ubuntu1), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), media-types (= 4.0.0), mime-support (= 3.66), ncurses-base (= 6.2+20201114-2), ncurses-bin (= 6.2+20201114-2), patch (= 2.7.6-7), perl (= 5.32.0-6), perl-base (= 5.32.0-6), perl-modules-5.32 (= 5.32.0-6), po-debconf (= 1.0.21+nmu1), python3 (= 3.9.1-1), python3-all (= 3.9.1-1), python3-all-dev (= 3.9.1-1), python3-dev (= 3.9.1-1), python3-distutils (= 3.9.1-1ubuntu1), python3-lib2to3 (= 3.9.1-1ubuntu1), python3-minimal (= 3.9.1-1), python3.9 (= 3.9.1-2), python3.9-dev (= 3.9.1-2), python3.9-minimal (= 3.9.1-2), readline-common (= 8.1-1), rpcsvc-proto (= 1.4.2-0ubuntu4), sed (= 4.7-1ubuntu1), sensible-utils (= 0.0.14), sysvinit-utils (= 2.96-5ubuntu1), tar (= 1.32+dfsg-1), tzdata (= 2020f-1ubuntu2), ucf (= 3.0043), util-linux (= 2.36.1-1ubuntu2), x11-common (= 1:7.7+19ubuntu15), xz-utils (= 5.2.4-1ubuntu1), zlib1g (= 1:1.2.11.dfsg-2ubuntu4), zlib1g-dev (= 1:1.2.11.dfsg-2ubuntu4) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1610877241" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ librcsb-core-wrapper0-dev_1.005-10_arm64.deb -------------------------------------------- new Debian package, version 2.0. size 355636 bytes: control archive=2056 bytes. 869 bytes, 20 lines control 3276 bytes, 50 lines md5sums Package: librcsb-core-wrapper0-dev Source: librcsb-core-wrapper Version: 1.005-10 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 2749 Depends: librcsb-core-wrapper0 (= 1.005-10) Suggests: librcsb-core-wrapper-doc Provides: librcsb-core-wrapper-dev Section: libdevel Priority: optional Homepage: https://sw-tools.rcsb.org/apps/CORE-WRAPPER/index.html Description: development files for librcsb-core-wrapper0 The RCSB Core Wrapper library was developed to provide an object-oriented application interface to information in mmCIF format. It includes several classes for accessing data dictionaries and mmCIF format data files. . This package contains files necessary for developing applications with the library. drwxr-xr-x root/root 0 2021-01-17 09:54 ./ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/include/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/include/rcsb/ -rw-r--r-- root/root 525 2021-01-17 09:54 ./usr/include/rcsb/BlockIO.h -rw-r--r-- root/root 3274 2021-01-17 09:54 ./usr/include/rcsb/CifCorrector.h -rw-r--r-- root/root 1756 2021-01-17 09:54 ./usr/include/rcsb/CifDataInfo.h -rw-r--r-- root/root 2398 2021-01-17 09:54 ./usr/include/rcsb/CifDefs.h -rw-r--r-- root/root 617 2021-01-17 09:54 ./usr/include/rcsb/CifExcept.h -rw-r--r-- root/root 22339 2021-01-17 09:54 ./usr/include/rcsb/CifFile.h -rw-r--r-- root/root 1518 2021-01-17 09:54 ./usr/include/rcsb/CifFileReadDef.h -rw-r--r-- root/root 1707 2021-01-17 09:54 ./usr/include/rcsb/CifFileUtil.h -rw-r--r-- root/root 1960 2021-01-17 09:54 ./usr/include/rcsb/CifParentChild.h -rw-r--r-- root/root 6387 2021-01-17 09:54 ./usr/include/rcsb/CifParserBase.h -rw-r--r-- root/root 898 2021-01-17 09:54 ./usr/include/rcsb/CifParserInt.h -rw-r--r-- root/root 1395 2021-01-17 09:54 ./usr/include/rcsb/CifScannerBase.h -rw-r--r-- root/root 750 2021-01-17 09:54 ./usr/include/rcsb/CifScannerInt.h -rw-r--r-- root/root 6737 2021-01-17 09:54 ./usr/include/rcsb/CifString.h -rw-r--r-- root/root 6964 2021-01-17 09:54 ./usr/include/rcsb/DICParserBase.h -rw-r--r-- root/root 1032 2021-01-17 09:54 ./usr/include/rcsb/DICParserInt.h -rw-r--r-- root/root 1476 2021-01-17 09:54 ./usr/include/rcsb/DICScannerBase.h -rw-r--r-- root/root 912 2021-01-17 09:54 ./usr/include/rcsb/DICScannerInt.h -rw-r--r-- root/root 2911 2021-01-17 09:54 ./usr/include/rcsb/DataInfo.h -rw-r--r-- root/root 5499 2021-01-17 09:54 ./usr/include/rcsb/DicFile.h -rw-r--r-- root/root 1447 2021-01-17 09:54 ./usr/include/rcsb/DictDataInfo.h -rw-r--r-- root/root 7746 2021-01-17 09:54 ./usr/include/rcsb/DictObjCont.h -rw-r--r-- root/root 4579 2021-01-17 09:54 ./usr/include/rcsb/DictObjContInfo.h -rw-r--r-- root/root 5617 2021-01-17 09:54 ./usr/include/rcsb/DictObjFile.h -rw-r--r-- root/root 896 2021-01-17 09:54 ./usr/include/rcsb/DictParentChild.h -rw-r--r-- root/root 3175 2021-01-17 09:54 ./usr/include/rcsb/Exceptions.h -rw-r--r-- root/root 547 2021-01-17 09:54 ./usr/include/rcsb/GenCont.h -rw-r--r-- root/root 5942 2021-01-17 09:54 ./usr/include/rcsb/GenString.h -rw-r--r-- root/root 52034 2021-01-17 09:54 ./usr/include/rcsb/ISTable.h -rw-r--r-- root/root 44543 2021-01-17 09:54 ./usr/include/rcsb/ITTable.h -rw-r--r-- root/root 2675 2021-01-17 09:54 ./usr/include/rcsb/ParentChild.h -rw-r--r-- root/root 258 2021-01-17 09:54 ./usr/include/rcsb/PdbMlFileUtil.h -rw-r--r-- root/root 2554 2021-01-17 09:54 ./usr/include/rcsb/PdbMlParserHandler.h -rw-r--r-- root/root 484 2021-01-17 09:54 ./usr/include/rcsb/RcsbFile.h -rw-r--r-- root/root 340 2021-01-17 09:54 ./usr/include/rcsb/RcsbPlatform.h -rw-r--r-- root/root 5674 2021-01-17 09:54 ./usr/include/rcsb/Serializer.h -rw-r--r-- root/root 20029 2021-01-17 09:54 ./usr/include/rcsb/TTable.h -rw-r--r-- root/root 1270 2021-01-17 09:54 ./usr/include/rcsb/TableError.h -rw-r--r-- root/root 21357 2021-01-17 09:54 ./usr/include/rcsb/TableFile.h -rw-r--r-- root/root 8652 2021-01-17 09:54 ./usr/include/rcsb/container_conversions.h -rw-r--r-- root/root 10685 2021-01-17 09:54 ./usr/include/rcsb/mapped_ptr_vector.C -rw-r--r-- root/root 2665 2021-01-17 09:54 ./usr/include/rcsb/mapped_ptr_vector.h -rw-r--r-- root/root 5764 2021-01-17 09:54 ./usr/include/rcsb/mapped_vector.C -rw-r--r-- root/root 1543 2021-01-17 09:54 ./usr/include/rcsb/mapped_vector.h -rw-r--r-- root/root 1232 2021-01-17 09:54 ./usr/include/rcsb/misc_util.h -rw-r--r-- root/root 210 2021-01-17 09:54 ./usr/include/rcsb/rcsb_math.h -rw-r--r-- root/root 617 2021-01-17 09:54 ./usr/include/rcsb/rcsb_types.h -rw-r--r-- root/root 1891 2021-01-17 09:54 ./usr/include/rcsb/regex.h drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/lib/ -rw-r--r-- root/root 2464878 2021-01-17 09:54 ./usr/lib/librcsb-core-wrapper.a lrwxrwxrwx root/root 0 2021-01-17 09:54 ./usr/lib/librcsb-core-wrapper.so -> librcsb-core-wrapper.so.0.0.1 drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/share/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/share/doc/librcsb-core-wrapper0-dev/ lrwxrwxrwx root/root 0 2021-01-17 09:54 ./usr/share/doc/librcsb-core-wrapper0-dev/changelog.Debian.gz -> ../librcsb-core-wrapper0/changelog.Debian.gz -rw-r--r-- root/root 27701 2021-01-17 09:54 ./usr/share/doc/librcsb-core-wrapper0-dev/copyright librcsb-core-wrapper0_1.005-10_arm64.deb ---------------------------------------- new Debian package, version 2.0. size 263892 bytes: control archive=1008 bytes. 802 bytes, 17 lines control 326 bytes, 4 lines md5sums 56 bytes, 1 lines shlibs 74 bytes, 2 lines triggers Package: librcsb-core-wrapper0 Source: librcsb-core-wrapper Version: 1.005-10 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1004 Depends: libc6 (>= 2.17), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2), libxerces-c3.2 Section: libs Priority: optional Homepage: https://sw-tools.rcsb.org/apps/CORE-WRAPPER/index.html Description: C++ library providing OO API to information in mmCIF format The RCSB Core Wrapper library was developed to provide an object-oriented application interface to information in mmCIF format. It includes several classes for accessing data dictionaries and mmCIF format data files. . This package contains the shared library. drwxr-xr-x root/root 0 2021-01-17 09:54 ./ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/lib/ lrwxrwxrwx root/root 0 2021-01-17 09:54 ./usr/lib/librcsb-core-wrapper.so.0 -> librcsb-core-wrapper.so.0.0.1 -rw-r--r-- root/root 983264 2021-01-17 09:54 ./usr/lib/librcsb-core-wrapper.so.0.0.1 drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/share/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/share/doc/librcsb-core-wrapper0/ -rw-r--r-- root/root 1448 2021-01-17 09:54 ./usr/share/doc/librcsb-core-wrapper0/changelog.Debian.gz -rw-r--r-- root/root 27701 2021-01-17 09:54 ./usr/share/doc/librcsb-core-wrapper0/copyright drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/share/lintian/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 136 2021-01-17 09:54 ./usr/share/lintian/overrides/librcsb-core-wrapper0 python3-corepywrap_1.005-10_arm64.deb ------------------------------------- new Debian package, version 2.0. size 195332 bytes: control archive=1072 bytes. 1003 bytes, 19 lines control 556 bytes, 6 lines md5sums Package: python3-corepywrap Source: librcsb-core-wrapper Version: 1.005-10 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1408 Depends: libboost-python1.74.0 (>= 1.74.0), libboost-python1.74.0-py39, libc6 (>= 2.17), libgcc-s1 (>= 3.0), librcsb-core-wrapper0 (= 1.005-10), libstdc++6 (>= 5.2), python3 (<< 3.10), python3 (>= 3.9~) Suggests: librcsb-core-wrapper-doc Provides: python3.9-corepywrap Section: python Priority: optional Homepage: https://sw-tools.rcsb.org/apps/CORE-WRAPPER/index.html Description: library that exports C++ mmCIF accessors to Python3 The RCSB Core Wrapper library was developed to provide an object-oriented application interface to information in mmCIF format. It includes several classes for accessing data dictionaries and mmCIF format data files. . This library provides Python3 bindings for librcsb-core-wrapper. drwxr-xr-x root/root 0 2021-01-17 09:54 ./ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/lib/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/lib/python3/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/lib/python3/dist-packages/ -rw-r--r-- root/root 1391896 2021-01-17 09:54 ./usr/lib/python3/dist-packages/CorePyWrap.cpython-39-aarch64-linux-gnu.so -rw-r--r-- root/root 359 2021-01-17 09:54 ./usr/lib/python3/dist-packages/python_corepywrap-1.000.egg-info drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/share/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/share/doc/python3-corepywrap/ -rw-r--r-- root/root 427 2021-01-17 09:54 ./usr/share/doc/python3-corepywrap/README.Debian lrwxrwxrwx root/root 0 2021-01-17 09:54 ./usr/share/doc/python3-corepywrap/changelog.Debian.gz -> ../librcsb-core-wrapper0/changelog.Debian.gz -rw-r--r-- root/root 27701 2021-01-17 09:54 ./usr/share/doc/python3-corepywrap/copyright drwxr-xr-x root/root 0 2021-01-17 09:54 ./usr/share/doc/python3-corepywrap/examples/ -rw-r--r-- root/root 2089 2013-10-21 12:54 ./usr/share/doc/python3-corepywrap/examples/ChemCompReaderTests.py -rw-r--r-- root/root 2513 2013-10-21 12:54 ./usr/share/doc/python3-corepywrap/examples/CorePyWrapTests.py +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Type: any Build-Space: n/a Build-Time: 435 Distribution: hirsute-proposed Host Architecture: arm64 Install-Time: 64 Job: librcsb-core-wrapper_1.005-10.dsc Machine Architecture: arm64 Package: librcsb-core-wrapper Package-Time: 503 Source-Version: 1.005-10 Space: n/a Status: successful Version: 1.005-10 -------------------------------------------------------------------------------- Finished at 2021-01-17T23:43:40Z Build needed 00:08:23, no disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=hirsute --arch=arm64 PACKAGEBUILD-20895226 Scanning for processes to kill in build PACKAGEBUILD-20895226