https://launchpad.net/ubuntu/+source/libseqlib/1.1.2+dfsg-9/+build/20205415 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-057 4.15.0-121-generic #123-Ubuntu SMP Mon Oct 5 16:19:23 UTC 2020 aarch64 Buildd toolchain package versions: launchpad-buildd_193~468~ubuntu18.04.1 python3-lpbuildd_193~468~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.7 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 29 Oct 01:41:47 ntpdate[1640]: adjust time server 10.211.37.1 offset 0.000834 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20205415 --image-type chroot /home/buildd/filecache-default/6663ab897c1b9684e4da3138ea2f806b3d40e7b1 Creating target for build PACKAGEBUILD-20205415 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20205415 Starting target for build PACKAGEBUILD-20205415 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20205415 'deb http://ftpmaster.internal/ubuntu hirsute main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-security main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-updates main universe' 'deb http://ftpmaster.internal/ubuntu hirsute-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-20205415 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20205415 Updating target for build PACKAGEBUILD-20205415 Get:1 http://ftpmaster.internal/ubuntu hirsute InRelease [267 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute-security InRelease [88.4 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute-updates InRelease [88.4 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed InRelease [114 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute/main armhf Packages [1338 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main Translation-en [508 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/universe armhf Packages [12.1 MB] Get:8 http://ftpmaster.internal/ubuntu hirsute/universe Translation-en [5261 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf Packages [164 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main Translation-en [73.1 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf Packages [569 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute-proposed/universe Translation-en [383 kB] Fetched 21.0 MB in 7s (2857 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt base-files base-passwd binutils binutils-arm-linux-gnueabihf binutils-common cpp-10 fakeroot g++-10 gcc-10 gcc-10-base libapparmor1 libapt-pkg6.0 libasan6 libatomic1 libaudit-common libaudit1 libbinutils libcap2 libcc1-0 libcrypt-dev libcrypt1 libctf-nobfd0 libctf0 libdebconfclient0 libfakeroot libgcc-10-dev libgcc-s1 libgomp1 libmpc3 libncurses6 libncursesw6 libnpth0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libstdc++-10-dev libstdc++6 libtinfo6 libtirpc-common libtirpc-dev libtirpc3 libubsan1 ncurses-base ncurses-bin sysvinit-utils tzdata 48 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 194 MB of archives. After this operation, 596 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libcrypt-dev armhf 1:4.4.17-1ubuntu1 [113 kB] Get:2 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libcrypt1 armhf 1:4.4.17-1ubuntu1 [86.7 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute/main armhf base-files armhf 11ubuntu16 [60.2 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libncursesw6 armhf 6.2+20200918-1 [106 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libncurses6 armhf 6.2+20200918-1 [79.9 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libtinfo6 armhf 6.2+20200918-1 [74.2 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf ncurses-bin armhf 6.2+20200918-1 [165 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libdebconfclient0 armhf 0.254ubuntu1 [5648 B] Get:9 http://ftpmaster.internal/ubuntu hirsute/main armhf base-passwd armhf 3.5.48 [46.0 kB] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf ncurses-base all 6.2+20200918-1 [18.7 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute/main armhf sysvinit-utils armhf 2.96-5ubuntu1 [19.2 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute/main armhf libcc1-0 armhf 10.2.0-15ubuntu1 [34.6 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute/main armhf gcc-10-base armhf 10.2.0-15ubuntu1 [19.5 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main armhf libgcc-s1 armhf 10.2.0-15ubuntu1 [36.2 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute/main armhf libgomp1 armhf 10.2.0-15ubuntu1 [87.1 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute/main armhf libatomic1 armhf 10.2.0-15ubuntu1 [7216 B] Get:17 http://ftpmaster.internal/ubuntu hirsute/main armhf libasan6 armhf 10.2.0-15ubuntu1 [328 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute/main armhf libubsan1 armhf 10.2.0-15ubuntu1 [122 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute/main armhf g++-10 armhf 10.2.0-15ubuntu1 [63.0 MB] Get:20 http://ftpmaster.internal/ubuntu hirsute/main armhf libstdc++-10-dev armhf 10.2.0-15ubuntu1 [1778 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute/main armhf libgcc-10-dev armhf 10.2.0-15ubuntu1 [719 kB] Get:22 http://ftpmaster.internal/ubuntu hirsute/main armhf gcc-10 armhf 10.2.0-15ubuntu1 [63.7 MB] Get:23 http://ftpmaster.internal/ubuntu hirsute/main armhf cpp-10 armhf 10.2.0-15ubuntu1 [57.0 MB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main armhf libstdc++6 armhf 10.2.0-15ubuntu1 [441 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libmpc3 armhf 1.2.0-1 [36.1 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libctf-nobfd0 armhf 2.35.1-2ubuntu1 [38.7 kB] Get:27 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libctf0 armhf 2.35.1-2ubuntu1 [37.6 kB] Get:28 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libbinutils armhf 2.35.1-2ubuntu1 [322 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf binutils-common armhf 2.35.1-2ubuntu1 [212 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf binutils armhf 2.35.1-2ubuntu1 [3368 B] Get:31 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf binutils-arm-linux-gnueabihf armhf 2.35.1-2ubuntu1 [2060 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libapt-pkg6.0 armhf 2.1.11 [773 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libseccomp2 armhf 2.4.3-1ubuntu5 [32.6 kB] Get:34 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf apt armhf 2.1.11 [1254 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute/main armhf libaudit-common all 1:2.8.5-3ubuntu2 [4092 B] Get:36 http://ftpmaster.internal/ubuntu hirsute/main armhf libaudit1 armhf 1:2.8.5-3ubuntu2 [36.2 kB] Get:37 http://ftpmaster.internal/ubuntu hirsute/main armhf libselinux1 armhf 3.1-2build1 [60.9 kB] Get:38 http://ftpmaster.internal/ubuntu hirsute/main armhf libsemanage-common all 3.1-1build1 [10.1 kB] Get:39 http://ftpmaster.internal/ubuntu hirsute/main armhf libsemanage1 armhf 3.1-1build1 [75.7 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libtirpc-common all 1.2.6-3 [7444 B] Get:41 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libtirpc-dev armhf 1.2.6-3 [175 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libtirpc3 armhf 1.2.6-3 [66.1 kB] Get:43 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libapparmor1 armhf 3.0.0-0ubuntu2 [31.1 kB] Get:44 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libcap2 armhf 1:2.44-1 [14.7 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute/main armhf tzdata all 2020d-1ubuntu1 [293 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libfakeroot armhf 1.25.3-1 [23.2 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf fakeroot armhf 1.25.3-1 [60.9 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libnpth0 armhf 1.6-3 [6980 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 194 MB in 11s (18.1 MB/s) (Reading database ... 12723 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.17-1ubuntu1_armhf.deb ... Unpacking libcrypt-dev:armhf (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Preparing to unpack .../libcrypt1_1%3a4.4.17-1ubuntu1_armhf.deb ... Unpacking libcrypt1:armhf (1:4.4.17-1ubuntu1) over (1:4.4.16-1ubuntu1) ... Setting up libcrypt1:armhf (1:4.4.17-1ubuntu1) ... (Reading database ... 12723 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu16_armhf.deb ... Unpacking base-files (11ubuntu16) over (11ubuntu14) ... Setting up base-files (11ubuntu16) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 12723 files and directories currently installed.) Preparing to unpack .../libncursesw6_6.2+20200918-1_armhf.deb ... Unpacking libncursesw6:armhf (6.2+20200918-1) over (6.2-1) ... 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Setting up base-passwd (3.5.48) ... Changing home-directory of irc from /var/run/ircd to /run/ircd 1 changes have been made, rewriting files Writing passwd-file to /etc/passwd Writing shadow-file to /etc/shadow Writing group-file to /etc/group (Reading database ... 12723 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.2+20200918-1_all.deb ... Unpacking ncurses-base (6.2+20200918-1) over (6.2-1) ... Setting up ncurses-base (6.2+20200918-1) ... (Reading database ... 12723 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_2.96-5ubuntu1_armhf.deb ... Unpacking sysvinit-utils (2.96-5ubuntu1) over (2.96-3ubuntu1) ... Setting up sysvinit-utils (2.96-5ubuntu1) ... (Reading database ... 12723 files and directories currently installed.) Preparing to unpack .../libcc1-0_10.2.0-15ubuntu1_armhf.deb ... Unpacking libcc1-0:armhf (10.2.0-15ubuntu1) over (10.2.0-13ubuntu1) ... 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Current default time zone: 'Etc/UTC' Local time is now: Thu Oct 29 01:43:10 UTC 2020. Universal Time is now: Thu Oct 29 01:43:10 UTC 2020. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.25.3-1) ... Setting up libtirpc-dev:armhf (1.2.6-3) ... Setting up libncurses6:armhf (6.2+20200918-1) ... Setting up libmpc3:armhf (1.2.0-1) ... Setting up libatomic1:armhf (10.2.0-15ubuntu1) ... Setting up libncursesw6:armhf (6.2+20200918-1) ... Setting up libubsan1:armhf (10.2.0-15ubuntu1) ... Setting up libcrypt-dev:armhf (1:4.4.17-1ubuntu1) ... Setting up libbinutils:armhf (2.35.1-2ubuntu1) ... Setting up libcc1-0:armhf (10.2.0-15ubuntu1) ... Setting up cpp-10 (10.2.0-15ubuntu1) ... Setting up libctf0:armhf (2.35.1-2ubuntu1) ... Setting up libgcc-10-dev:armhf (10.2.0-15ubuntu1) ... Setting up binutils-arm-linux-gnueabihf (2.35.1-2ubuntu1) ... Setting up libstdc++-10-dev:armhf (10.2.0-15ubuntu1) ... Setting up binutils (2.35.1-2ubuntu1) ... Setting up gcc-10 (10.2.0-15ubuntu1) ... Setting up g++-10 (10.2.0-15ubuntu1) ... Processing triggers for libc-bin (2.32-0ubuntu3) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-20205415 armhf hirsute-proposed -c chroot:build-PACKAGEBUILD-20205415 --arch=armhf --dist=hirsute-proposed --nolog libseqlib_1.1.2+dfsg-9.dsc Initiating build PACKAGEBUILD-20205415 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-121-generic #123-Ubuntu SMP Mon Oct 5 16:19:23 UTC 2020 armv7l sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-arm64-057.buildd +==============================================================================+ | libseqlib 1.1.2+dfsg-9 (armhf) Thu, 29 Oct 2020 01:43:13 +0000 | +==============================================================================+ Package: libseqlib Version: 1.1.2+dfsg-9 Source Version: 1.1.2+dfsg-9 Distribution: hirsute-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-20205415/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- libseqlib_1.1.2+dfsg-9.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/libseqlib-4iXW65/libseqlib-1.1.2+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/libseqlib-4iXW65' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-e97HM4/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-e97HM4/apt_archive ./ InRelease Get:2 copy:/<>/resolver-e97HM4/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-e97HM4/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-e97HM4/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-e97HM4/apt_archive ./ Packages [429 B] Fetched 1735 B in 0s (42.3 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-e97HM4/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (50.7 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev | libcurl4-dev, zlib1g-dev, libfml-dev (>= 0.1-3), libbwa-dev (>= 0.7.15-3), libjsoncpp-dev, libssw-dev Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, pkg-kde-tools, libhts-dev, libcurl4-gnutls-dev | libcurl4-dev, zlib1g-dev, libfml-dev (>= 0.1-3), libbwa-dev (>= 0.7.15-3), libjsoncpp-dev, libssw-dev dpkg-deb: building package 'sbuild-build-depends-libseqlib-dummy' in '/<>/resolver-e97HM4/apt_archive/sbuild-build-depends-libseqlib-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-libseqlib-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-e97HM4/apt_archive ./ InRelease Get:2 copy:/<>/resolver-e97HM4/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-e97HM4/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-e97HM4/apt_archive ./ Sources [579 B] Get:5 copy:/<>/resolver-e97HM4/apt_archive ./ Packages [661 B] Fetched 2203 B in 0s (38.4 kB/s) Reading package lists... Reading package lists... Install libseqlib build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism diffstat dwz file gettext gettext-base groff-base intltool-debian libaliased-perl libapt-pkg-perl libarchive-zip-perl libasn1-8-heimdal libb-hooks-endofscope-perl libb-hooks-op-check-perl libbrotli1 libbwa-dev libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libcroco3 libcurl3-gnutls libcurl4-gnutls-dev libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdebhelper-perl libdeflate-dev libdeflate0 libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libelf1 libemail-address-xs-perl libexception-class-perl libexpat1 libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfile-stripnondeterminism-perl libfml-dev libfml0 libfont-ttf-perl libglib2.0-0 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhtml-html5-entities-perl libhts-dev libhts3 libhx509-5-heimdal libicu67 libimport-into-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libjsoncpp-dev libjsoncpp1 libkrb5-26-heimdal libldap-2.4-2 liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzma-dev liblzo2-2 libmagic-mgc libmagic1 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnghttp2-14 libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libpipeline1 libproc-processtable-perl libpsl5 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libroken18-heimdal librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsigsegv2 libssh-4 libssw-dev libssw0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-override-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtool libtry-tiny-perl libtype-tiny-perl libuchardet0 libunicode-utf8-perl liburi-perl libvariable-magic-perl libwind0-heimdal libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml2 libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop m4 man-db mime-support patchutils pkg-config pkg-kde-tools po-debconf python3 python3-minimal python3.8 python3.8-minimal t1utils ucf unzip zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff samtools libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev libxml-parser-perl liblzma-doc libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libtool-doc gfortran | fortran95-compiler gcj-jdk libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl m4-doc apparmor less www-browser cdbs libmail-box-perl python3-doc python3-tk python3-venv python3.8-venv python3.8-doc binfmt-support zip Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libldap-common libpackage-stash-xs-perl publicsuffix libsasl2-modules libltdl-dev libref-util-perl libtype-tiny-xs-perl libwww-perl libxml-sax-expat-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism diffstat dwz file gettext gettext-base groff-base intltool-debian libaliased-perl libapt-pkg-perl libarchive-zip-perl libasn1-8-heimdal libb-hooks-endofscope-perl libb-hooks-op-check-perl libbrotli1 libbwa-dev libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libcroco3 libcurl3-gnutls libcurl4-gnutls-dev libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdebhelper-perl libdeflate-dev libdeflate0 libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libelf1 libemail-address-xs-perl libexception-class-perl libexpat1 libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfile-stripnondeterminism-perl libfml-dev libfml0 libfont-ttf-perl libglib2.0-0 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhtml-html5-entities-perl libhts-dev libhts3 libhx509-5-heimdal libicu67 libimport-into-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libjsoncpp-dev libjsoncpp1 libkrb5-26-heimdal libldap-2.4-2 liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzma-dev liblzo2-2 libmagic-mgc libmagic1 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnghttp2-14 libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libpipeline1 libproc-processtable-perl libpsl5 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libroken18-heimdal librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsigsegv2 libssh-4 libssw-dev libssw0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-override-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtool libtry-tiny-perl libtype-tiny-perl libuchardet0 libunicode-utf8-perl liburi-perl libvariable-magic-perl libwind0-heimdal libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml2 libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop m4 man-db mime-support patchutils pkg-config pkg-kde-tools po-debconf python3 python3-minimal python3.8 python3.8-minimal sbuild-build-depends-libseqlib-dummy t1utils ucf unzip zlib1g-dev 0 upgraded, 165 newly installed, 0 to remove and 0 not upgraded. Need to get 32.5 MB of archives. After this operation, 110 MB of additional disk space will be used. Get:1 copy:/<>/resolver-e97HM4/apt_archive ./ sbuild-build-depends-libseqlib-dummy 0.invalid.0 [948 B] Get:2 http://ftpmaster.internal/ubuntu hirsute/main armhf libpython3.8-minimal armhf 3.8.6-1 [706 kB] Get:3 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libexpat1 armhf 2.2.10-1 [55.1 kB] Get:4 http://ftpmaster.internal/ubuntu hirsute/main armhf python3.8-minimal armhf 3.8.6-1 [1508 kB] Get:5 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf python3-minimal armhf 3.8.6-1 [24.1 kB] Get:6 http://ftpmaster.internal/ubuntu hirsute/main armhf mime-support all 3.64ubuntu1 [30.6 kB] Get:7 http://ftpmaster.internal/ubuntu hirsute/main armhf libpython3.8-stdlib armhf 3.8.6-1 [1639 kB] Get:8 http://ftpmaster.internal/ubuntu hirsute/main armhf python3.8 armhf 3.8.6-1 [376 kB] Get:9 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libpython3-stdlib armhf 3.8.6-1 [7416 B] Get:10 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf python3 armhf 3.8.6-1 [48.8 kB] Get:11 http://ftpmaster.internal/ubuntu hirsute/main armhf bsdextrautils armhf 2.36-3ubuntu1 [70.6 kB] Get:12 http://ftpmaster.internal/ubuntu hirsute/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get:13 http://ftpmaster.internal/ubuntu hirsute/main armhf groff-base armhf 1.22.4-5 [759 kB] Get:14 http://ftpmaster.internal/ubuntu hirsute/main armhf libpipeline1 armhf 1.5.3-1 [23.3 kB] Get:15 http://ftpmaster.internal/ubuntu hirsute/main armhf man-db armhf 2.9.3-2 [1082 kB] Get:16 http://ftpmaster.internal/ubuntu hirsute/main armhf libmagic-mgc armhf 1:5.38-5 [218 kB] Get:17 http://ftpmaster.internal/ubuntu hirsute/main armhf libmagic1 armhf 1:5.38-5 [68.4 kB] Get:18 http://ftpmaster.internal/ubuntu hirsute/main armhf file armhf 1:5.38-5 [22.4 kB] Get:19 http://ftpmaster.internal/ubuntu hirsute/main armhf libelf1 armhf 0.181-1 [39.5 kB] Get:20 http://ftpmaster.internal/ubuntu hirsute/main armhf libglib2.0-0 armhf 2.66.1-2 [1138 kB] Get:21 http://ftpmaster.internal/ubuntu hirsute/main armhf libicu67 armhf 67.1-4 [8304 kB] Get:22 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libxml2 armhf 2.9.10+dfsg-6.1 [531 kB] Get:23 http://ftpmaster.internal/ubuntu hirsute/main armhf libyaml-0-2 armhf 0.2.2-1 [41.3 kB] Get:24 http://ftpmaster.internal/ubuntu hirsute/main armhf ucf all 3.0043 [56.1 kB] Get:25 http://ftpmaster.internal/ubuntu hirsute/main armhf gettext-base armhf 0.19.8.1-10build1 [46.0 kB] Get:26 http://ftpmaster.internal/ubuntu hirsute/main armhf libpsl5 armhf 0.21.0-1.1ubuntu1 [51.1 kB] Get:27 http://ftpmaster.internal/ubuntu hirsute/main armhf libsigsegv2 armhf 2.12-2build1 [13.0 kB] Get:28 http://ftpmaster.internal/ubuntu hirsute/main armhf m4 armhf 1.4.18-4 [187 kB] Get:29 http://ftpmaster.internal/ubuntu hirsute/main armhf autoconf all 2.69-11.1 [321 kB] Get:30 http://ftpmaster.internal/ubuntu hirsute/main armhf autotools-dev all 20180224.1 [39.6 kB] Get:31 http://ftpmaster.internal/ubuntu hirsute/main armhf automake all 1:1.16.2-4ubuntu1 [548 kB] Get:32 http://ftpmaster.internal/ubuntu hirsute/main armhf autopoint all 0.19.8.1-10build1 [412 kB] Get:33 http://ftpmaster.internal/ubuntu hirsute/universe armhf d-shlibs all 0.95 [9664 B] Get:34 http://ftpmaster.internal/ubuntu hirsute/main armhf libtool all 2.4.6-14 [161 kB] Get:35 http://ftpmaster.internal/ubuntu hirsute/main armhf dh-autoreconf all 19 [16.1 kB] Get:36 http://ftpmaster.internal/ubuntu hirsute/main armhf libdebhelper-perl all 13.2.1ubuntu1 [63.6 kB] Get:37 http://ftpmaster.internal/ubuntu hirsute/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] Get:38 http://ftpmaster.internal/ubuntu hirsute/main armhf libsub-override-perl all 0.09-2 [9532 B] Get:39 http://ftpmaster.internal/ubuntu hirsute/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:40 http://ftpmaster.internal/ubuntu hirsute/main armhf dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:41 http://ftpmaster.internal/ubuntu hirsute/main armhf dwz armhf 0.13-5 [153 kB] Get:42 http://ftpmaster.internal/ubuntu hirsute/main armhf libcroco3 armhf 0.6.13-1 [70.5 kB] Get:43 http://ftpmaster.internal/ubuntu hirsute/main armhf gettext armhf 0.19.8.1-10build1 [835 kB] Get:44 http://ftpmaster.internal/ubuntu hirsute/main armhf intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:45 http://ftpmaster.internal/ubuntu hirsute/main armhf po-debconf all 1.0.21 [233 kB] Get:46 http://ftpmaster.internal/ubuntu hirsute/main armhf debhelper all 13.2.1ubuntu1 [879 kB] Get:47 http://ftpmaster.internal/ubuntu hirsute/main armhf diffstat armhf 1.63-1 [25.1 kB] Get:48 http://ftpmaster.internal/ubuntu hirsute/main armhf libaliased-perl all 0.34-1 [13.2 kB] Get:49 http://ftpmaster.internal/ubuntu hirsute/main armhf libapt-pkg-perl armhf 0.1.36build3 [63.4 kB] Get:50 http://ftpmaster.internal/ubuntu hirsute/main armhf libroken18-heimdal armhf 7.7.0+dfsg-2 [34.5 kB] Get:51 http://ftpmaster.internal/ubuntu hirsute/main armhf libasn1-8-heimdal armhf 7.7.0+dfsg-2 [140 kB] Get:52 http://ftpmaster.internal/ubuntu hirsute/main armhf libb-hooks-op-check-perl armhf 0.22-1build2 [9792 B] Get:53 http://ftpmaster.internal/ubuntu hirsute/main armhf libdynaloader-functions-perl all 0.003-1 [11.9 kB] Get:54 http://ftpmaster.internal/ubuntu hirsute/main armhf libdevel-callchecker-perl armhf 0.008-1ubuntu1 [14.2 kB] Get:55 http://ftpmaster.internal/ubuntu hirsute/main armhf libparams-classify-perl armhf 0.015-1build2 [19.8 kB] Get:56 http://ftpmaster.internal/ubuntu hirsute/main armhf libmodule-runtime-perl all 0.016-1 [16.2 kB] Get:57 http://ftpmaster.internal/ubuntu hirsute/main armhf libtry-tiny-perl all 0.30-1 [20.5 kB] Get:58 http://ftpmaster.internal/ubuntu hirsute/main armhf libmodule-implementation-perl all 0.09-1 [12.2 kB] Get:59 http://ftpmaster.internal/ubuntu hirsute/main armhf libsub-exporter-progressive-perl all 0.001013-1 [6784 B] Get:60 http://ftpmaster.internal/ubuntu hirsute/main armhf libvariable-magic-perl armhf 0.62-1build2 [31.9 kB] Get:61 http://ftpmaster.internal/ubuntu hirsute/main armhf libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] Get:62 http://ftpmaster.internal/ubuntu hirsute/main armhf libbrotli1 armhf 1.0.9-2build1 [259 kB] Get:63 http://ftpmaster.internal/ubuntu hirsute/universe armhf libbwa-dev armhf 0.7.17-5 [127 kB] Get:64 http://ftpmaster.internal/ubuntu hirsute/main armhf libcapture-tiny-perl all 0.48-1 [20.4 kB] Get:65 http://ftpmaster.internal/ubuntu hirsute/main armhf libclass-data-inheritable-perl all 0.08-3 [8084 B] Get:66 http://ftpmaster.internal/ubuntu hirsute/main armhf libclass-method-modifiers-perl all 2.13-1 [16.2 kB] Get:67 http://ftpmaster.internal/ubuntu hirsute/main armhf libclass-xsaccessor-perl armhf 1.19-3build5 [33.6 kB] Get:68 http://ftpmaster.internal/ubuntu hirsute/main armhf libclone-perl armhf 0.45-1 [9836 B] Get:69 http://ftpmaster.internal/ubuntu hirsute/main armhf libconfig-tiny-perl all 2.24-1 [12.4 kB] Get:70 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libcpanel-json-xs-perl armhf 4.24-1 [108 kB] Get:71 http://ftpmaster.internal/ubuntu hirsute/main armhf libheimbase1-heimdal armhf 7.7.0+dfsg-2 [24.3 kB] Get:72 http://ftpmaster.internal/ubuntu hirsute/main armhf libhcrypto4-heimdal armhf 7.7.0+dfsg-2 [78.5 kB] Get:73 http://ftpmaster.internal/ubuntu hirsute/main armhf libwind0-heimdal armhf 7.7.0+dfsg-2 [47.2 kB] Get:74 http://ftpmaster.internal/ubuntu hirsute/main armhf libhx509-5-heimdal armhf 7.7.0+dfsg-2 [88.8 kB] Get:75 http://ftpmaster.internal/ubuntu hirsute/main armhf libkrb5-26-heimdal armhf 7.7.0+dfsg-2 [170 kB] Get:76 http://ftpmaster.internal/ubuntu hirsute/main armhf libheimntlm0-heimdal armhf 7.7.0+dfsg-2 [13.2 kB] Get:77 http://ftpmaster.internal/ubuntu hirsute/main armhf libgssapi3-heimdal armhf 7.7.0+dfsg-2 [79.9 kB] Get:78 http://ftpmaster.internal/ubuntu hirsute/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-2ubuntu1 [13.2 kB] Get:79 http://ftpmaster.internal/ubuntu hirsute/main armhf libsasl2-2 armhf 2.1.27+dfsg-2ubuntu1 [42.4 kB] Get:80 http://ftpmaster.internal/ubuntu hirsute/main armhf libldap-2.4-2 armhf 2.4.53+dfsg-1ubuntu1 [135 kB] Get:81 http://ftpmaster.internal/ubuntu hirsute/main armhf libnghttp2-14 armhf 1.41.0-3 [57.8 kB] Get:82 http://ftpmaster.internal/ubuntu hirsute/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2build2 [48.9 kB] Get:83 http://ftpmaster.internal/ubuntu hirsute/main armhf libssh-4 armhf 0.9.4-1ubuntu3 [147 kB] Get:84 http://ftpmaster.internal/ubuntu hirsute/main armhf libcurl3-gnutls armhf 7.68.0-1ubuntu4 [200 kB] Get:85 http://ftpmaster.internal/ubuntu hirsute/main armhf libcurl4-gnutls-dev armhf 7.68.0-1ubuntu4 [291 kB] Get:86 http://ftpmaster.internal/ubuntu hirsute/main armhf libdevel-stacktrace-perl all 2.0400-1 [22.7 kB] Get:87 http://ftpmaster.internal/ubuntu hirsute/main armhf libexception-class-perl all 1.44-1 [25.9 kB] Get:88 http://ftpmaster.internal/ubuntu hirsute/main armhf libiterator-perl all 0.03+ds1-1 [18.7 kB] Get:89 http://ftpmaster.internal/ubuntu hirsute/main armhf libiterator-util-perl all 0.02+ds1-1 [14.0 kB] Get:90 http://ftpmaster.internal/ubuntu hirsute/main armhf libexporter-tiny-perl all 1.002002-1 [36.2 kB] Get:91 http://ftpmaster.internal/ubuntu hirsute/main armhf liblist-moreutils-perl armhf 0.416-1build5 [52.7 kB] Get:92 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf libparams-util-perl armhf 1.101-1 [20.8 kB] Get:93 http://ftpmaster.internal/ubuntu hirsute/main armhf libsub-install-perl all 0.928-1 [10.5 kB] Get:94 http://ftpmaster.internal/ubuntu hirsute/main armhf libdata-optlist-perl all 0.110-1 [9956 B] Get:95 http://ftpmaster.internal/ubuntu hirsute/main armhf libsub-exporter-perl all 0.987-1 [44.9 kB] Get:96 http://ftpmaster.internal/ubuntu hirsute/main armhf libdata-dpath-perl all 0.58-1 [38.8 kB] Get:97 http://ftpmaster.internal/ubuntu hirsute/main armhf libdata-messagepack-perl armhf 1.00-4 [31.1 kB] Get:98 http://ftpmaster.internal/ubuntu hirsute/main armhf libnet-domain-tld-perl all 1.75-1 [29.1 kB] Get:99 http://ftpmaster.internal/ubuntu hirsute/main armhf libdata-validate-domain-perl all 0.10-1 [11.0 kB] Get:100 http://ftpmaster.internal/ubuntu hirsute/universe armhf libdeflate0 armhf 1.6-1 [46.1 kB] Get:101 http://ftpmaster.internal/ubuntu hirsute/universe armhf libdeflate-dev armhf 1.6-1 [38.4 kB] Get:102 http://ftpmaster.internal/ubuntu hirsute/main armhf libemail-address-xs-perl armhf 1.04-1build3 [24.5 kB] Get:103 http://ftpmaster.internal/ubuntu hirsute/main armhf libipc-system-simple-perl all 1.30-1 [23.2 kB] Get:104 http://ftpmaster.internal/ubuntu hirsute/main armhf libfile-basedir-perl all 0.08-1 [16.9 kB] Get:105 http://ftpmaster.internal/ubuntu hirsute/main armhf libnumber-compare-perl all 0.03-1 [7318 B] Get:106 http://ftpmaster.internal/ubuntu hirsute/main armhf libtext-glob-perl all 0.11-1 [7992 B] Get:107 http://ftpmaster.internal/ubuntu hirsute/main armhf libfile-find-rule-perl all 0.34-1 [28.3 kB] Get:108 http://ftpmaster.internal/ubuntu hirsute/universe armhf libfml0 armhf 0.1-13 [69.5 kB] Get:109 http://ftpmaster.internal/ubuntu hirsute/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2ubuntu4 [149 kB] Get:110 http://ftpmaster.internal/ubuntu hirsute/universe armhf libfml-dev armhf 0.1-13 [79.7 kB] Get:111 http://ftpmaster.internal/ubuntu hirsute/main armhf libio-string-perl all 1.08-3 [11.1 kB] Get:112 http://ftpmaster.internal/ubuntu hirsute/main armhf libfont-ttf-perl all 1.06-1 [313 kB] Get:113 http://ftpmaster.internal/ubuntu hirsute/universe armhf libhtml-html5-entities-perl all 0.004-1 [21.4 kB] Get:114 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf libhts3 armhf 1.11-2 [301 kB] Get:115 http://ftpmaster.internal/ubuntu hirsute/main armhf liblzma-dev armhf 5.2.4-1ubuntu1 [139 kB] Get:116 http://ftpmaster.internal/ubuntu hirsute-proposed/universe armhf libhts-dev armhf 1.11-2 [3794 kB] Get:117 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0.83-1build1 [19.3 kB] Get:155 http://ftpmaster.internal/ubuntu hirsute/main armhf libipc-run3-perl all 0.048-2 [31.4 kB] Get:156 http://ftpmaster.internal/ubuntu hirsute/main armhf lzip armhf 1.21-8 [71.7 kB] Get:157 http://ftpmaster.internal/ubuntu hirsute/main armhf lzop armhf 1.04-1build1 [81.2 kB] Get:158 http://ftpmaster.internal/ubuntu hirsute/main armhf patchutils armhf 0.4.2-1 [70.0 kB] Get:159 http://ftpmaster.internal/ubuntu hirsute/main armhf t1utils armhf 1.41-4 [48.4 kB] Get:160 http://ftpmaster.internal/ubuntu hirsute/main armhf unzip armhf 6.0-25ubuntu1 [155 kB] Get:161 http://ftpmaster.internal/ubuntu hirsute-proposed/main armhf lintian all 2.99.0ubuntu1 [944 kB] Get:162 http://ftpmaster.internal/ubuntu hirsute/main armhf pkg-config armhf 0.29.2-1ubuntu1 [43.4 kB] Get:163 http://ftpmaster.internal/ubuntu hirsute/main armhf libjsoncpp1 armhf 1.7.4-3.1ubuntu2 [65.1 kB] Get:164 http://ftpmaster.internal/ubuntu hirsute/main armhf libjsoncpp-dev armhf 1.7.4-3.1ubuntu2 [83.0 kB] Get:165 http://ftpmaster.internal/ubuntu hirsute/universe armhf pkg-kde-tools all 0.15.32ubuntu3 [96.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 32.5 MB in 3s (10.8 MB/s) Selecting previously unselected package libpython3.8-minimal:armhf. (Reading database ... 12722 files and directories currently installed.) Preparing to unpack .../libpython3.8-minimal_3.8.6-1_armhf.deb ... Unpacking libpython3.8-minimal:armhf (3.8.6-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.2.10-1_armhf.deb ... Unpacking libexpat1:armhf (2.2.10-1) ... Selecting previously unselected package python3.8-minimal. Preparing to unpack .../python3.8-minimal_3.8.6-1_armhf.deb ... Unpacking python3.8-minimal (3.8.6-1) ... Setting up libpython3.8-minimal:armhf (3.8.6-1) ... Setting up libexpat1:armhf (2.2.10-1) ... Setting up python3.8-minimal (3.8.6-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 13013 files and directories currently installed.) Preparing to unpack .../python3-minimal_3.8.6-1_armhf.deb ... Unpacking python3-minimal (3.8.6-1) ... Selecting previously unselected package mime-support. Preparing to unpack .../mime-support_3.64ubuntu1_all.deb ... 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Unpacking sbuild-build-depends-libseqlib-dummy (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.36build3) ... Setting up libpipeline1:armhf (1.5.3-1) ... Setting up libpsl5:armhf (0.21.0-1.1ubuntu1) ... Setting up libunicode-utf8-perl (0.62-1build1) ... Setting up libmouse-perl (2.5.10-1build1) ... Setting up mime-support (3.64ubuntu1) ... Setting up bsdextrautils (2.36-3ubuntu1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libdata-messagepack-perl (1.00-4) ... Setting up libicu67:armhf (67.1-4) ... Setting up libdynaloader-functions-perl (0.003-1) ... Setting up libtext-glob-perl (0.11-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.55-1) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libclone-perl (0.45-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:armhf (0.2.2-1) ... Setting up libsub-identify-perl (0.14-1build2) ... Setting up libglib2.0-0:armhf (2.66.1-2) ... No schema files found: doing nothing. Setting up libcpanel-json-xs-perl (4.24-1) ... Setting up libdevel-size-perl (0.83-1build1) ... Setting up unzip (6.0-25ubuntu1) ... Setting up libdebhelper-perl (13.2.1ubuntu1) ... Setting up libbrotli1:armhf (1.0.9-2build1) ... Setting up libyaml-libyaml-perl (0.82+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up libnghttp2-14:armhf (1.41.0-3) ... Setting up libmagic1:armhf (1:5.38-5) ... Setting up libdeflate0:armhf (1.6-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up liblzo2-2:armhf (2.10-2) ... Setting up libtime-moment-perl (0.44-1build3) ... Setting up file (1:5.38-5) ... Setting up libconfig-tiny-perl (2.24-1) ... Setting up libsereal-encoder-perl (4.018+ds-1) ... Setting up liblist-utilsby-perl (0.11-1) ... Setting up libfml0:armhf (0.1-13) ... Setting up libsub-install-perl (0.928-1) ... Setting up libnumber-compare-perl (0.03-1) ... Setting up libsasl2-modules-db:armhf (2.1.27+dfsg-2ubuntu1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004002-1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up autotools-dev (20180224.1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2build2) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up lzip (1.21-8) ... Setting up libsigsegv2:armhf (2.12-2build1) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.63-1) ... Setting up libvariable-magic-perl (0.62-1build2) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up libb-hooks-op-check-perl (0.22-1build2) ... Setting up pkg-config (0.29.2-1ubuntu1) ... Setting up d-shlibs (0.95) ... Setting up ucf (3.0043) ... Setting up libparams-util-perl (1.101-1) ... Setting up libsasl2-2:armhf (2.1.27+dfsg-2ubuntu1) ... Setting up libssh-4:armhf (0.9.4-1ubuntu3) ... Setting up libroken18-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl (3.5.8-1build1) ... Setting up libbwa-dev (0.7.17-5) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-1) ... Setting up liblzma-dev:armhf (5.2.4-1ubuntu1) ... Setting up libsub-name-perl (0.26-1) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2ubuntu4) ... Setting up libdata-validate-domain-perl (0.10-1) ... Setting up libproc-processtable-perl (0.59-2) ... Setting up libpath-tiny-perl (0.114-1) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up lzop (1.04-1build1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libsub-override-perl (0.09-2) ... Setting up libaliased-perl (0.34-1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3build5) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libpython3.8-stdlib:armhf (3.8.6-1) ... Setting up python3.8 (3.8.6-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libtext-levenshteinxs-perl (0.03-4build7) ... Setting up libdeflate-dev:armhf (1.6-1) ... Setting up libperlio-gzip-perl (0.19-1build5) ... Setting up libelf1:armhf (0.181-1) ... Setting up libssw0:armhf (1.1-11) ... Setting up libxml2:armhf (2.9.10+dfsg-6.1) ... Setting up libhtml-html5-entities-perl (0.004-1) ... Setting up libsereal-decoder-perl (4.018+ds-1) ... Setting up libmarkdown2:armhf (2.2.6-1ubuntu1) ... Setting up liburi-perl (5.05-1) ... Setting up libjsoncpp1:armhf (1.7.4-3.1ubuntu2) ... Setting up libpython3-stdlib:armhf (3.8.6-1) ... Setting up libheimbase1-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libemail-address-xs-perl (1.04-1build3) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libjsoncpp-dev:armhf (1.7.4-3.1ubuntu2) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up libfml-dev:armhf (0.1-13) ... Setting up libssw-dev:armhf (1.1-11) ... Setting up libtool (2.4.6-14) ... Setting up liblist-moreutils-perl (0.416-1build5) ... Setting up libasn1-8-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libtype-tiny-perl (1.010006-1) ... Setting up libtext-markdown-discount-perl:armhf (0.12-1) ... Setting up m4 (1.4.18-4) ... Setting up python3 (3.8.6-1) ... Setting up libexception-class-perl (1.44-1) ... Setting up libdevel-callchecker-perl (0.008-1ubuntu1) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libhcrypto4-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libwind0-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libdata-optlist-perl (0.110-1) ... Setting up libcroco3:armhf (0.6.13-1) ... Setting up autoconf (2.69-11.1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up automake (1:1.16.2-4ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libiterator-perl (0.03+ds1-1) ... Setting up gettext (0.19.8.1-10build1) ... Setting up libiterator-util-perl (0.02+ds1-1) ... Setting up libhx509-5-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libparams-classify-perl (0.015-1build2) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libkrb5-26-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004000-1) ... Setting up po-debconf (1.0.21) ... Setting up libheimntlm0-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libgssapi3-heimdal:armhf (7.7.0+dfsg-2) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libldap-2.4-2:armhf (2.4.53+dfsg-1ubuntu1) ... Setting up libcurl3-gnutls:armhf (7.68.0-1ubuntu4) ... Setting up libcurl4-gnutls-dev:armhf (7.68.0-1ubuntu4) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up libhts3:armhf (1.11-2) ... Setting up libhts-dev:armhf (1.11-2) ... Setting up lintian (2.99.0ubuntu1) ... Setting up pkg-kde-tools (0.15.32ubuntu3) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13.2.1ubuntu1) ... Setting up sbuild-build-depends-libseqlib-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.32-0ubuntu3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-121-generic arm64 (armv7l) Toolchain package versions: binutils_2.35.1-2ubuntu1 dpkg-dev_1.20.5ubuntu2 g++-10_10.2.0-15ubuntu1 gcc-10_10.2.0-15ubuntu1 libc6-dev_2.32-0ubuntu3 libstdc++-10-dev_10.2.0-15ubuntu1 libstdc++6_10.2.0-15ubuntu1 linux-libc-dev_5.8.0-25.26 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.1.11 autoconf_2.69-11.1 automake_1:1.16.2-4ubuntu1 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu16 base-passwd_3.5.48 bash_5.0-6ubuntu2 binutils_2.35.1-2ubuntu1 binutils-arm-linux-gnueabihf_2.35.1-2ubuntu1 binutils-common_2.35.1-2ubuntu1 bsdextrautils_2.36-3ubuntu1 bsdutils_1:2.36-3ubuntu1 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 ca-certificates_20200601 coreutils_8.32-3ubuntu1 cpp_4:10.2.0-1ubuntu1 cpp-10_10.2.0-15ubuntu1 d-shlibs_0.95 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2.1ubuntu1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffstat_1.63-1 diffutils_1:3.7-3ubuntu1 dpkg_1.20.5ubuntu2 dpkg-dev_1.20.5ubuntu2 dwz_0.13-5 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.25.3-1 file_1:5.38-5 findutils_4.7.0-1ubuntu2 g++_4:10.2.0-1ubuntu1 g++-10_10.2.0-15ubuntu1 gcc_4:10.2.0-1ubuntu1 gcc-10_10.2.0-15ubuntu1 gcc-10-base_10.2.0-15ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2ubuntu1 hostname_3.23 init_1.58 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libaliased-perl_0.34-1 libapparmor1_3.0.0-0ubuntu2 libapt-pkg-perl_0.1.36build3 libapt-pkg6.0_2.1.11 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2build20.10.0 libasan6_10.2.0-15ubuntu1 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libdata-dpath-perl_0.58-1 libdata-messagepack-perl_1.00-4 libdata-optlist-perl_0.110-1 libdata-validate-domain-perl_0.10-1 libdb5.3_5.3.28+dfsg1-0.6ubuntu3 libdebconfclient0_0.254ubuntu1 libdebhelper-perl_13.2.1ubuntu1 libdeflate-dev_1.6-1 libdeflate0_1.6-1 libdevel-callchecker-perl_0.008-1ubuntu1 libdevel-size-perl_0.83-1build1 libdevel-stacktrace-perl_2.0400-1 libdevmapper1.02.1_2:1.02.167-1ubuntu3 libdpkg-perl_1.20.5ubuntu2 libdynaloader-functions-perl_0.003-1 libelf1_0.181-1 libemail-address-xs-perl_1.04-1build3 libexception-class-perl_1.44-1 libexpat1_2.2.10-1 libexporter-tiny-perl_1.002002-1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.25.3-1 libffi8ubuntu1_3.4~20200819gead65ca871-0ubuntu3 libfile-basedir-perl_0.08-1 libfile-find-rule-perl_0.34-1 libfile-stripnondeterminism-perl_1.9.0-1 libfml-dev_0.1-13 libfml0_0.1-13 libfont-ttf-perl_1.06-1 libgcc-10-dev_10.2.0-15ubuntu1 libgcc-s1_10.2.0-15ubuntu1 libgcrypt20_1.8.5-5ubuntu2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.1-2 libgmp10_2:6.2.0+dfsg-6ubuntu1 libgnutls30_3.6.15-4ubuntu2 libgomp1_10.2.0-15ubuntu1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10 libgssapi3-heimdal_7.7.0+dfsg-2 libhcrypto4-heimdal_7.7.0+dfsg-2 libheimbase1-heimdal_7.7.0+dfsg-2 libheimntlm0-heimdal_7.7.0+dfsg-2 libhogweed6_3.6-2 libhtml-html5-entities-perl_0.004-1 libhts-dev_1.11-2 libhts3_1.11-2 libhx509-5-heimdal_7.7.0+dfsg-2 libicu67_67.1-4 libidn2-0_2.3.0-1 libimport-into-perl_1.002005-1 libio-string-perl_1.08-3 libip4tc2_1.8.5-3ubuntu1 libipc-run3-perl_0.048-2 libipc-system-simple-perl_1.30-1 libisl22_0.22.1-1 libiterator-perl_0.03+ds1-1 libiterator-util-perl_0.02+ds1-1 libjson-c5_0.15-1 libjson-maybexs-perl_1.004002-1 libjsoncpp-dev_1.7.4-3.1ubuntu2 libjsoncpp1_1.7.4-3.1ubuntu2 libk5crypto3_1.17-10 libkeyutils1_1.6.1-2ubuntu1 libkmod2_27+20200310-2ubuntu1 libkrb5-26-heimdal_7.7.0+dfsg-2 libkrb5-3_1.17-10 libkrb5support0_1.17-10 libldap-2.4-2_2.4.53+dfsg-1ubuntu1 liblist-compare-perl_0.55-1 liblist-moreutils-perl_0.416-1build5 liblist-utilsby-perl_0.11-1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1ubuntu1 liblzma5_5.2.4-1ubuntu1 liblzo2-2_2.10-2 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmarkdown2_2.2.6-1ubuntu1 libmodule-implementation-perl_0.09-1 libmodule-runtime-perl_0.016-1 libmoo-perl_2.004000-1 libmoox-aliases-perl_0.001006-1 libmount1_2.36-3ubuntu1 libmouse-perl_2.5.10-1build1 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libnamespace-clean-perl_0.27-1 libncurses6_6.2+20200918-1 libncursesw6_6.2+20200918-1 libnet-domain-tld-perl_1.75-1 libnettle8_3.6-2 libnghttp2-14_1.41.0-3 libnpth0_1.6-3 libnsl-dev_1.3.0-0ubuntu3 libnsl2_1.3.0-0ubuntu3 libnss-nis_3.1-0ubuntu4 libnss-nisplus_1.3-0ubuntu4 libnumber-compare-perl_0.03-1 libp11-kit0_0.23.21-2build1 libpackage-stash-perl_0.38-1 libpam-modules_1.3.1-5ubuntu6 libpam-modules-bin_1.3.1-5ubuntu6 libpam-runtime_1.3.1-5ubuntu6 libpam0g_1.3.1-5ubuntu6 libparams-classify-perl_0.015-1build2 libparams-util-perl_1.101-1 libpath-tiny-perl_0.114-1 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libperlio-gzip-perl_0.19-1build5 libpipeline1_1.5.3-1 libpng16-16_1.6.37-3 libproc-processtable-perl_0.59-2 libprocps8_2:3.3.16-5ubuntu2 libpsl5_0.21.0-1.1ubuntu1 libpython3-stdlib_3.8.6-1 libpython3.8-minimal_3.8.6-1 libpython3.8-stdlib_3.8.6-1 libreadline8_8.0-4 libroken18-heimdal_7.7.0+dfsg-2 librole-tiny-perl_2.001004-1 librtmp1_2.4+20151223.gitfa8646d.1-2build2 libsasl2-2_2.1.27+dfsg-2ubuntu1 libsasl2-modules-db_2.1.27+dfsg-2ubuntu1 libseccomp2_2.4.3-1ubuntu5 libselinux1_3.1-2build1 libsemanage-common_3.1-1build1 libsemanage1_3.1-1build1 libsepol1_3.1-1 libsereal-decoder-perl_4.018+ds-1 libsereal-encoder-perl_4.018+ds-1 libsigsegv2_2.12-2build1 libsmartcols1_2.36-3ubuntu1 libsqlite3-0_3.33.0-1 libss2_1.45.6-1ubuntu1 libssh-4_0.9.4-1ubuntu3 libssl1.1_1.1.1f-1ubuntu4 libssw-dev_1.1-11 libssw0_1.1-11 libstdc++-10-dev_10.2.0-15ubuntu1 libstdc++6_10.2.0-15ubuntu1 libstrictures-perl_2.000006-1 libsub-exporter-perl_0.987-1 libsub-exporter-progressive-perl_0.001013-1 libsub-identify-perl_0.14-1build2 libsub-install-perl_0.928-1 libsub-name-perl_0.26-1 libsub-override-perl_0.09-2 libsub-quote-perl_2.006006-1 libsystemd0_246.6-1ubuntu1 libtasn1-6_4.16.0-2 libtext-glob-perl_0.11-1 libtext-levenshteinxs-perl_0.03-4build7 libtext-markdown-discount-perl_0.12-1 libtext-xslate-perl_3.5.8-1build1 libtime-duration-perl_1.21-1 libtime-moment-perl_0.44-1build3 libtimedate-perl_2.3300-1 libtinfo6_6.2+20200918-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libtry-tiny-perl_0.30-1 libtype-tiny-perl_1.010006-1 libubsan1_10.2.0-15ubuntu1 libuchardet0_0.0.7-1 libudev1_246.6-1ubuntu1 libunicode-utf8-perl_0.62-1build1 libunistring2_0.9.10-4 liburi-perl_5.05-1 libuuid1_2.36-3ubuntu1 libvariable-magic-perl_0.62-1build2 libwind0-heimdal_7.7.0+dfsg-2 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml2_2.9.10+dfsg-6.1 libyaml-0-2_0.2.2-1 libyaml-libyaml-perl_0.82+repack-1 libzstd1_1.4.5+dfsg-4 lintian_2.99.0ubuntu1 linux-libc-dev_5.8.0-25.26 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu6 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 lzip_1.21-8 lzop_1.04-1build1 m4_1.4.18-4 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mime-support_3.64ubuntu1 mount_2.36-3ubuntu1 ncurses-base_6.2+20200918-1 ncurses-bin_6.2+20200918-1 openssl_1.1.1f-1ubuntu4 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu6 patch_2.7.6-6 patchutils_0.4.2-1 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4build1 pkg-config_0.29.2-1ubuntu1 pkg-kde-tools_0.15.32ubuntu3 pkgbinarymangler_146 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu2 python3_3.8.6-1 python3-minimal_3.8.6-1 python3.8_3.8.6-1 python3.8-minimal_3.8.6-1 readline-common_8.0-4 rpcsvc-proto_1.4.2-0ubuntu4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libseqlib-dummy_0.invalid.0 sed_4.7-1ubuntu1 sensible-utils_0.0.13 systemd_246.6-1ubuntu1 systemd-sysv_246.6-1ubuntu1 systemd-timesyncd_246.6-1ubuntu1 sysvinit-utils_2.96-5ubuntu1 t1utils_1.41-4 tar_1.30+dfsg-7 tzdata_2020d-1ubuntu1 ubuntu-keyring_2020.06.17.1 ucf_3.0043 unzip_6.0-25ubuntu1 util-linux_2.36-3ubuntu1 xz-utils_5.2.4-1ubuntu1 zlib1g_1:1.2.11.dfsg-2ubuntu4 zlib1g-dev_1:1.2.11.dfsg-2ubuntu4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon Oct 26 15:52:22 2020 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libseqlib_1.1.2+dfsg-9.dsc dpkg-source: info: extracting libseqlib in /<>/libseqlib-1.1.2+dfsg dpkg-source: info: unpacking libseqlib_1.1.2+dfsg.orig.tar.xz dpkg-source: info: unpacking libseqlib_1.1.2+dfsg-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_libs.patch dpkg-source: info: applying adapt_to_debian_fermi-lite.patch dpkg-source: info: applying fix_fermi-lite_usage.patch dpkg-source: info: applying fix_htslib_usage.patch dpkg-source: info: applying fml_include_path.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying use_debian_packaged_jsoncpp.patch dpkg-source: info: applying use_debian_packaged_ssw.patch dpkg-source: info: applying pkg-config.patch dpkg-source: info: applying fix_private_htslib_usage.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-20205415 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-20205415 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-20205415 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package libseqlib dpkg-buildpackage: info: source version 1.1.2+dfsg-9 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --with pkgkde_symbolshelper dh_clean debian/rules binary-arch dh binary-arch --with pkgkde_symbolshelper dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. libtoolize: 'AC_PROG_RANLIB' is rendered obsolete by 'LT_INIT' configure.ac:17: installing './compile' configure.ac:19: installing './config.guess' configure.ac:19: installing './config.sub' configure.ac:4: installing './missing' src/Makefile.am: installing './depcomp' dh_auto_configure -a ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... none checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for ranlib... ranlib checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking for library containing gzopen... -lz checking for library containing clock_gettime... none required checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for htslib... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/seqtools/Makefile config.status: creating libseqlib.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j4 make[1]: Entering directory '/<>/libseqlib-1.1.2+dfsg' make all-recursive make[2]: Entering directory '/<>/libseqlib-1.1.2+dfsg' Making all in src make[3]: Entering directory '/<>/libseqlib-1.1.2+dfsg/src' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-FastqReader.lo `test -f 'FastqReader.cpp' || echo './'`FastqReader.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BFC.lo `test -f 'BFC.cpp' || echo './'`BFC.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include 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-fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c FastqReader.cpp -fPIC -DPIC -o .libs/libseqlib_la-FastqReader.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ReadFilter.cpp -fPIC -DPIC -o .libs/libseqlib_la-ReadFilter.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c SeqPlot.cpp -fPIC -DPIC -o .libs/libseqlib_la-SeqPlot.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BFC.cpp -fPIC -DPIC -o .libs/libseqlib_la-BFC.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c FastqReader.cpp -o libseqlib_la-FastqReader.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BFC.cpp -o libseqlib_la-BFC.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-GenomicRegion.lo `test -f 'GenomicRegion.cpp' || echo './'`GenomicRegion.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c GenomicRegion.cpp -fPIC -DPIC -o .libs/libseqlib_la-GenomicRegion.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-RefGenome.lo `test -f 'RefGenome.cpp' || echo './'`RefGenome.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c RefGenome.cpp -fPIC -DPIC -o .libs/libseqlib_la-RefGenome.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c SeqPlot.cpp -o libseqlib_la-SeqPlot.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c GenomicRegion.cpp -o libseqlib_la-GenomicRegion.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c RefGenome.cpp -o libseqlib_la-RefGenome.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamWriter.lo `test -f 'BamWriter.cpp' || echo './'`BamWriter.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BamWriter.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamWriter.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamReader.lo `test -f 'BamReader.cpp' || echo './'`BamReader.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BamReader.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamReader.o In file included from /usr/include/c++/10/vector:72, from ../SeqLib/ReadFilter.h:7, from ReadFilter.cpp:1: /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const SeqLib::Filter::AbstractRule&}; _Tp = SeqLib::Filter::AbstractRule; _Alloc = std::allocator]’: /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ../SeqLib/ReadFilter.h:7, from ReadFilter.cpp:1: /usr/include/c++/10/bits/stl_vector.h: In member function ‘void SeqLib::Filter::ReadFilter::AddRule(const SeqLib::Filter::AbstractRule&)’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BWAWrapper.lo `test -f 'BWAWrapper.cpp' || echo './'`BWAWrapper.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BWAWrapper.cpp -fPIC -DPIC -o .libs/libseqlib_la-BWAWrapper.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BamWriter.cpp -o libseqlib_la-BamWriter.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamRecord.lo `test -f 'BamRecord.cpp' || echo './'`BamRecord.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BamRecord.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamRecord.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BWAWrapper.cpp -o libseqlib_la-BWAWrapper.o >/dev/null 2>&1 /usr/include/c++/10/bits/stl_vector.h: In constructor ‘SeqLib::Filter::ReadFilterCollection::ReadFilterCollection(const string&, const SeqLib::BamHeader&)’: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BamReader.cpp -o libseqlib_la-BamReader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-FermiAssembler.lo `test -f 'FermiAssembler.cpp' || echo './'`FermiAssembler.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c FermiAssembler.cpp -fPIC -DPIC -o .libs/libseqlib_la-FermiAssembler.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c ReadFilter.cpp -o libseqlib_la-ReadFilter.o >/dev/null 2>&1 In file included from /usr/include/c++/10/vector:72, from ../SeqLib/BamRecord.h:6, from BamRecord.cpp:1: /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector SeqLib::BamRecord::GetSmartDoubleTag(const string&) const’: /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BamRecord.cpp -o libseqlib_la-BamRecord.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c FermiAssembler.cpp -o libseqlib_la-FermiAssembler.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml `/usr/bin/pkg-config --cflags jsoncpp` -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libseqlib_la-BamHeader.lo `test -f 'BamHeader.cpp' || echo './'`BamHeader.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BamHeader.cpp -fPIC -DPIC -o .libs/libseqlib_la-BamHeader.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include -I/usr/include/htslib -I/usr/include/fml -I/usr/include/jsoncpp -Wno-sign-compare -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BamHeader.cpp -o libseqlib_la-BamHeader.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link g++ -g -Wno-unknown-pragmas -g -O2 -fdebug-prefix-map=/<>/libseqlib-1.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 1:0 -lfml `/usr/bin/pkg-config --libs htslib` `/usr/bin/pkg-config --libs jsoncpp` -lssw -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libseqlib.la -rpath /usr/lib/arm-linux-gnueabihf libseqlib_la-FastqReader.lo libseqlib_la-BFC.lo libseqlib_la-ReadFilter.lo libseqlib_la-SeqPlot.lo libseqlib_la-GenomicRegion.lo libseqlib_la-RefGenome.lo libseqlib_la-BamWriter.lo libseqlib_la-BamReader.lo libseqlib_la-BWAWrapper.lo libseqlib_la-BamRecord.lo libseqlib_la-FermiAssembler.lo libseqlib_la-BamHeader.lo -lz -pthread libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o .libs/libseqlib_la-FastqReader.o .libs/libseqlib_la-BFC.o .libs/libseqlib_la-ReadFilter.o .libs/libseqlib_la-SeqPlot.o .libs/libseqlib_la-GenomicRegion.o .libs/libseqlib_la-RefGenome.o .libs/libseqlib_la-BamWriter.o .libs/libseqlib_la-BamReader.o .libs/libseqlib_la-BWAWrapper.o .libs/libseqlib_la-BamRecord.o .libs/libseqlib_la-FermiAssembler.o .libs/libseqlib_la-BamHeader.o -lfml -lhts -ljsoncpp -lssw -lz -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../../lib -L/lib/arm-linux-gnueabihf -L/lib/../lib -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/../lib -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -g -g -O2 -fstack-protector-strong -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -pthread -pthread -Wl,-soname -Wl,libseqlib.so.1 -o .libs/libseqlib.so.1.0.0 libtool: link: (cd ".libs" && rm -f "libseqlib.so.1" && ln -s "libseqlib.so.1.0.0" "libseqlib.so.1") libtool: link: (cd ".libs" && rm -f "libseqlib.so" && ln -s "libseqlib.so.1.0.0" "libseqlib.so") libtool: link: ar cr .libs/libseqlib.a libseqlib_la-FastqReader.o libseqlib_la-BFC.o libseqlib_la-ReadFilter.o libseqlib_la-SeqPlot.o libseqlib_la-GenomicRegion.o libseqlib_la-RefGenome.o libseqlib_la-BamWriter.o libseqlib_la-BamReader.o libseqlib_la-BWAWrapper.o libseqlib_la-BamRecord.o libseqlib_la-FermiAssembler.o libseqlib_la-BamHeader.o libtool: link: ranlib .libs/libseqlib.a libtool: link: ( cd ".libs" && rm -f "libseqlib.la" && ln -s "../libseqlib.la" "libseqlib.la" ) make[3]: Leaving directory '/<>/libseqlib-1.1.2+dfsg/src' make[3]: Entering directory '/<>/libseqlib-1.1.2+dfsg' make[3]: Leaving directory '/<>/libseqlib-1.1.2+dfsg' make[2]: Leaving directory '/<>/libseqlib-1.1.2+dfsg' make[1]: Leaving directory '/<>/libseqlib-1.1.2+dfsg' dh_auto_test -a make -j4 check VERBOSE=1 make[1]: Entering directory '/<>/libseqlib-1.1.2+dfsg' Making check in src make[2]: Entering directory '/<>/libseqlib-1.1.2+dfsg/src' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/<>/libseqlib-1.1.2+dfsg/src' make[2]: Entering directory '/<>/libseqlib-1.1.2+dfsg' make[2]: Leaving directory '/<>/libseqlib-1.1.2+dfsg' make[1]: Leaving directory '/<>/libseqlib-1.1.2+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/libseqlib-1.1.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>/libseqlib-1.1.2+dfsg' echo "mkdir -p bin && cp src/libseqlib.a fermi-lite/libfml.a bwa/libbwa.a htslib/libhts.a bin" mkdir -p bin && cp src/libseqlib.a fermi-lite/libfml.a bwa/libbwa.a htslib/libhts.a bin make[1]: Leaving directory '/<>/libseqlib-1.1.2+dfsg' debian/rules override_dh_install make[1]: Entering directory '/<>/libseqlib-1.1.2+dfsg' dh_install # Trick to get also headers moved by d-shlibmove cp -a SeqLib debian # note: also GenomicRegionCollection.cpp is really needed by freebayes d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/SeqLib usr/include \ --override s/libfml0-dev/libfml-dev/ \ --override s/libssw0-dev/libssw-dev/ \ src/.libs/libseqlib.so Library package automatic movement utility --> libfml-dev package exists. --> libhts-dev package exists. --> libjsoncpp-dev package exists. --> libssw-dev package exists. --> zlib1g-dev package exists. set -e install -d -m 755 debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/libseqlib1/usr/lib/arm-linux-gnueabihf mv src/.libs/libseqlib.a debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf mv src/.libs/libseqlib.so debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf mv /<>/libseqlib-1.1.2+dfsg/src/.libs/libseqlib.so.1 debian/libseqlib1/usr/lib/arm-linux-gnueabihf mv /<>/libseqlib-1.1.2+dfsg/src/.libs/libseqlib.so.1.0.0 debian/libseqlib1/usr/lib/arm-linux-gnueabihf PKGDEV=libseqlib-dev PKGSHL=libseqlib1 install -d -m 755 debian/libseqlib-dev/usr/include mv debian/SeqLib debian/libseqlib-dev/usr/include mkdir -p /<>/libseqlib-1.1.2+dfsg/debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf/pkgconfig mv libseqlib.pc /<>/libseqlib-1.1.2+dfsg/debian/libseqlib-dev/usr/lib/arm-linux-gnueabihf/pkgconfig make[1]: Leaving directory '/<>/libseqlib-1.1.2+dfsg' dh_installdocs -a dh_installchangelogs -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a -a dh_strip -a -a dh_makeshlibs -a -a dpkg-gensymbols: warning: some new symbols appeared in the symbols file: see diff output below dpkg-gensymbols: warning: debian/libseqlib1/DEBIAN/symbols doesn't match completely debian/libseqlib1.symbols --- debian/libseqlib1.symbols (libseqlib1_1.1.2+dfsg-9_armhf) +++ dpkg-gensymbolsilOT05 2020-10-29 01:47:26.844032125 +0000 @@ -367,12 +367,12 @@ (optional=templinst|arch=armel riscv64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EED0Ev@Base 1.1.2 (optional=templinst|arch=armel riscv64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EED1Ev@Base 1.1.2 (optional=templinst|arch=armel riscv64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EED2Ev@Base 1.1.2 - (optional=templinst|arch=amd64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE10_M_destroyEv@Base 1.1.2 - (optional=templinst|arch=amd64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.1.2 - (optional=templinst|arch=amd64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE14_M_get_deleterERKSt9type_info@Base 1.1.2 - (optional=templinst|arch=amd64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED0Ev@Base 1.1.2 - (optional=templinst|arch=amd64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED1Ev@Base 1.1.2 - (optional=templinst|arch=amd64)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED2Ev@Base 1.1.2 + (optional=templinst)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE10_M_destroyEv@Base 1.1.2 + (optional=templinst)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv@Base 1.1.2 + (optional=templinst)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EE14_M_get_deleterERKSt9type_info@Base 1.1.2 + (optional=templinst)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED0Ev@Base 1.1.2 + (optional=templinst)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED1Ev@Base 1.1.2 + (optional=templinst)_ZNSt19_Sp_counted_deleterIP9hts_idx_t10idx_deleteSaIvELN9__gnu_cxx12_Lock_policyE2EED2Ev@Base 1.1.2 (optional=templinst|arch=armel riscv64)_ZNSt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE10_M_destroyEv@Base 1.1.2 (optional=templinst|arch=armel riscv64)_ZNSt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE10_M_disposeEv@Base 1.1.2 (optional=templinst|arch=armel riscv64)_ZNSt19_Sp_counted_deleterIP9hts_itr_t14hts_itr_deleteSaIvELN9__gnu_cxx12_Lock_policyE1EE14_M_get_deleterERKSt9type_info@Base 1.1.2 @@ -401,6 +401,7 @@ (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPS2_S4_EE@Base 1.1.2 + _ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EE9push_backERKS2_@Base 1.1.2+dfsg-9 (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EEC1ERKS4_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EEC2ERKS4_@Base 1.1.2 (optional=templinst)_ZNSt6vectorIN12aho_corasick7ahoemitIcEESaIS2_EED1Ev@Base 1.1.2 dh_shlibdeps -a -a dpkg-shlibdeps: warning: symbol bwa_idx_load used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol nst_nt4_table used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwt_dump_sa used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol err_fwrite used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwa_fill_scmat used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwt_bwtupdate_core used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bwa_verbose used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol bns_dump used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol err_fflush used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol err_fclose used by debian/libseqlib1/usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 found in none of the libraries dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 pkgstriptranslations: processing libseqlib1 (in debian/libseqlib1); do_strip: , oemstrip: pkgstriptranslations: processing libseqlib1-dbgsym (in debian/.debhelper/libseqlib1/dbgsym-root); do_strip: , oemstrip: pkgstriptranslations: processing libseqlib-dev (in debian/libseqlib-dev); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libseqlib1/DEBIAN/control, package libseqlib1, directory debian/libseqlib1 pkgstripfiles: Truncating usr/share/doc/libseqlib1/changelog.Debian.gz to topmost ten records pkgstripfiles: processing control file: debian/libseqlib-dev/DEBIAN/control, package libseqlib-dev, directory debian/libseqlib-dev pkgstripfiles: Running PNG optimization (using 4 cpus) for package libseqlib1 ... INFO: pkgstripfiles: waiting for lock (libseqlib-dev) ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libseqlib1' in '../libseqlib1_1.1.2+dfsg-9_armhf.deb'. Searching for duplicated docs in dependency libseqlib1... symlinking changelog.Debian.gz in libseqlib-dev to file in libseqlib1 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libseqlib-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libseqlib-dev' in '../libseqlib-dev_1.1.2+dfsg-9_armhf.deb'. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/libseqlib1/dbgsym-root/DEBIAN/control, package libseqlib1-dbgsym, directory debian/.debhelper/libseqlib1/dbgsym-root dpkg-deb: building package 'libseqlib1-dbgsym' in 'debian/.debhelper/scratch-space/build-libseqlib1/libseqlib1-dbgsym_1.1.2+dfsg-9_armhf.deb'. Renaming libseqlib1-dbgsym_1.1.2+dfsg-9_armhf.deb to libseqlib1-dbgsym_1.1.2+dfsg-9_armhf.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../libseqlib_1.1.2+dfsg-9_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-10-29T01:47:41Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ libseqlib_1.1.2+dfsg-9_armhf.changes: ------------------------------------- Format: 1.8 Date: Mon, 26 Oct 2020 16:51:53 +0100 Source: libseqlib Binary: libseqlib-dev libseqlib1 Architecture: armhf Version: 1.1.2+dfsg-9 Distribution: hirsute-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Michael R. Crusoe Description: libseqlib-dev - C++ htslib/bwa-mem/fermi interface for interrogating sequence dat libseqlib1 - C++ htslib/bwa-mem/fermi interface for interrogating sequence dat Changes: libseqlib (1.1.2+dfsg-9) unstable; urgency=medium . * Team upload. * More symbols updates. * Mark most of Debian's patches as not appropriate for forwarding to upstream. Checksums-Sha1: 40bc21724e2d1e05515b19b358927ab21544ead2 162492 libseqlib-dev_1.1.2+dfsg-9_armhf.deb 67fa48e1ed469588dc935ae97e78b83aefffa4aa 1598684 libseqlib1-dbgsym_1.1.2+dfsg-9_armhf.ddeb 725c2bce00b5ccfb247240d5f618c16869cc27b5 104784 libseqlib1_1.1.2+dfsg-9_armhf.deb 3647ad24a124f4c37ac19a15ae318144131a0e94 10972 libseqlib_1.1.2+dfsg-9_armhf.buildinfo Checksums-Sha256: 8f1e2c9796b8eec2d7aa5b4c010f9a97e1ef67bc6894354212e31cec3548f344 162492 libseqlib-dev_1.1.2+dfsg-9_armhf.deb 1a2cf1aa3beb59186a7429fb481214444790a894ddb12909c6f8f0b8123030ea 1598684 libseqlib1-dbgsym_1.1.2+dfsg-9_armhf.ddeb 4e8b5eaf4eb28881789c52473d8f4e868668a358be310cd279c9482a9a07a139 104784 libseqlib1_1.1.2+dfsg-9_armhf.deb cda41ed96c6ec4176652ab6f32d08119bd5aef70dab12f213c92f8d9651aac23 10972 libseqlib_1.1.2+dfsg-9_armhf.buildinfo Files: f9a013df3398e0fc323e046c803bcea8 162492 libdevel optional libseqlib-dev_1.1.2+dfsg-9_armhf.deb a573c531ff470619ed489f47e1d4a75f 1598684 debug optional libseqlib1-dbgsym_1.1.2+dfsg-9_armhf.ddeb 09b12bf07b99f5b788e5f5217707bdfd 104784 libs optional libseqlib1_1.1.2+dfsg-9_armhf.deb 22ac97021a910652b305db500c5133aa 10972 science optional libseqlib_1.1.2+dfsg-9_armhf.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: libseqlib Binary: libseqlib-dev libseqlib1 libseqlib1-dbgsym Architecture: armhf Version: 1.1.2+dfsg-9 Checksums-Md5: f9a013df3398e0fc323e046c803bcea8 162492 libseqlib-dev_1.1.2+dfsg-9_armhf.deb a573c531ff470619ed489f47e1d4a75f 1598684 libseqlib1-dbgsym_1.1.2+dfsg-9_armhf.ddeb 09b12bf07b99f5b788e5f5217707bdfd 104784 libseqlib1_1.1.2+dfsg-9_armhf.deb Checksums-Sha1: 40bc21724e2d1e05515b19b358927ab21544ead2 162492 libseqlib-dev_1.1.2+dfsg-9_armhf.deb 67fa48e1ed469588dc935ae97e78b83aefffa4aa 1598684 libseqlib1-dbgsym_1.1.2+dfsg-9_armhf.ddeb 725c2bce00b5ccfb247240d5f618c16869cc27b5 104784 libseqlib1_1.1.2+dfsg-9_armhf.deb Checksums-Sha256: 8f1e2c9796b8eec2d7aa5b4c010f9a97e1ef67bc6894354212e31cec3548f344 162492 libseqlib-dev_1.1.2+dfsg-9_armhf.deb 1a2cf1aa3beb59186a7429fb481214444790a894ddb12909c6f8f0b8123030ea 1598684 libseqlib1-dbgsym_1.1.2+dfsg-9_armhf.ddeb 4e8b5eaf4eb28881789c52473d8f4e868668a358be310cd279c9482a9a07a139 104784 libseqlib1_1.1.2+dfsg-9_armhf.deb Build-Origin: Ubuntu Build-Architecture: armhf Build-Date: Thu, 29 Oct 2020 01:47:40 +0000 Build-Path: /<>/libseqlib-1.1.2+dfsg Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: adduser (= 3.118ubuntu2), apt (= 2.1.11), autoconf (= 2.69-11.1), automake (= 1:1.16.2-4ubuntu1), autopoint (= 0.19.8.1-10build1), autotools-dev (= 20180224.1), base-files (= 11ubuntu16), base-passwd (= 3.5.48), bash (= 5.0-6ubuntu2), binutils (= 2.35.1-2ubuntu1), binutils-arm-linux-gnueabihf (= 2.35.1-2ubuntu1), binutils-common (= 2.35.1-2ubuntu1), bsdextrautils (= 2.36-3ubuntu1), bsdutils (= 1:2.36-3ubuntu1), build-essential (= 12.8ubuntu3), bzip2 (= 1.0.8-4ubuntu2), coreutils (= 8.32-3ubuntu1), cpp (= 4:10.2.0-1ubuntu1), cpp-10 (= 10.2.0-15ubuntu1), d-shlibs (= 0.95), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.2.1ubuntu1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffstat (= 1.63-1), diffutils (= 1:3.7-3ubuntu1), dpkg (= 1.20.5ubuntu2), dpkg-dev (= 1.20.5ubuntu2), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1ubuntu2), g++ (= 4:10.2.0-1ubuntu1), g++-10 (= 10.2.0-15ubuntu1), gcc (= 4:10.2.0-1ubuntu1), gcc-10 (= 10.2.0-15ubuntu1), gcc-10-base (= 10.2.0-15ubuntu1), gettext (= 0.19.8.1-10build1), gettext-base (= 0.19.8.1-10build1), gpg (= 2.2.20-1ubuntu1), gpgconf (= 2.2.20-1ubuntu1), gpgv (= 2.2.20-1ubuntu1), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2ubuntu1), hostname (= 3.23), init-system-helpers (= 1.58), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libaliased-perl (= 0.34-1), libapt-pkg-perl (= 0.1.36build3), libapt-pkg6.0 (= 2.1.11), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.0-15ubuntu1), libasn1-8-heimdal (= 7.7.0+dfsg-2), libassuan0 (= 2.5.3-7.1), libatomic1 (= 10.2.0-15ubuntu1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3ubuntu2), libaudit1 (= 1:2.8.5-3ubuntu2), libb-hooks-endofscope-perl (= 0.24-1), libb-hooks-op-check-perl (= 0.22-1build2), libbinutils (= 2.35.1-2ubuntu1), libblkid1 (= 2.36-3ubuntu1), libbrotli1 (= 1.0.9-2build1), libbwa-dev (= 0.7.17-5), libbz2-1.0 (= 1.0.8-4ubuntu2), libc-bin (= 2.32-0ubuntu3), libc-dev-bin (= 2.32-0ubuntu3), libc6 (= 2.32-0ubuntu3), libc6-dev (= 2.32-0ubuntu3), libcap-ng0 (= 0.7.9-2.2), libcapture-tiny-perl (= 0.48-1), libcc1-0 (= 10.2.0-15ubuntu1), libclass-data-inheritable-perl (= 0.08-3), libclass-method-modifiers-perl (= 2.13-1), libclass-xsaccessor-perl (= 1.19-3build5), libclone-perl (= 0.45-1), libcom-err2 (= 1.45.6-1ubuntu1), libconfig-tiny-perl (= 2.24-1), libcpanel-json-xs-perl (= 4.24-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.17-1ubuntu1), libcrypt1 (= 1:4.4.17-1ubuntu1), libctf-nobfd0 (= 2.35.1-2ubuntu1), libctf0 (= 2.35.1-2ubuntu1), libcurl3-gnutls (= 7.68.0-1ubuntu4), libcurl4-gnutls-dev (= 7.68.0-1ubuntu4), libdata-dpath-perl (= 0.58-1), libdata-messagepack-perl (= 1.00-4), libdata-optlist-perl (= 0.110-1), libdata-validate-domain-perl (= 0.10-1), libdb5.3 (= 5.3.28+dfsg1-0.6ubuntu3), libdebconfclient0 (= 0.254ubuntu1), libdebhelper-perl (= 13.2.1ubuntu1), libdeflate-dev (= 1.6-1), libdeflate0 (= 1.6-1), libdevel-callchecker-perl (= 0.008-1ubuntu1), libdevel-size-perl (= 0.83-1build1), libdevel-stacktrace-perl (= 2.0400-1), libdpkg-perl (= 1.20.5ubuntu2), libdynaloader-functions-perl (= 0.003-1), libelf1 (= 0.181-1), libemail-address-xs-perl (= 1.04-1build3), libexception-class-perl (= 1.44-1), libexpat1 (= 2.2.10-1), libexporter-tiny-perl (= 1.002002-1), libffi8ubuntu1 (= 3.4~20200819gead65ca871-0ubuntu3), libfile-basedir-perl (= 0.08-1), libfile-find-rule-perl (= 0.34-1), libfile-stripnondeterminism-perl (= 1.9.0-1), libfml-dev (= 0.1-13), libfml0 (= 0.1-13), libfont-ttf-perl (= 1.06-1), libgcc-10-dev (= 10.2.0-15ubuntu1), libgcc-s1 (= 10.2.0-15ubuntu1), libgcrypt20 (= 1.8.5-5ubuntu2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libglib2.0-0 (= 2.66.1-2), libgmp10 (= 2:6.2.0+dfsg-6ubuntu1), libgnutls30 (= 3.6.15-4ubuntu2), libgomp1 (= 10.2.0-15ubuntu1), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.17-10), libgssapi3-heimdal (= 7.7.0+dfsg-2), libhcrypto4-heimdal (= 7.7.0+dfsg-2), libheimbase1-heimdal (= 7.7.0+dfsg-2), libheimntlm0-heimdal (= 7.7.0+dfsg-2), libhogweed6 (= 3.6-2), libhtml-html5-entities-perl (= 0.004-1), libhts-dev (= 1.11-2), libhts3 (= 1.11-2), libhx509-5-heimdal (= 7.7.0+dfsg-2), libicu67 (= 67.1-4), libidn2-0 (= 2.3.0-1), libimport-into-perl (= 1.002005-1), libio-string-perl (= 1.08-3), libipc-run3-perl (= 0.048-2), libipc-system-simple-perl (= 1.30-1), libisl22 (= 0.22.1-1), libiterator-perl (= 0.03+ds1-1), libiterator-util-perl (= 0.02+ds1-1), libjson-maybexs-perl (= 1.004002-1), libjsoncpp-dev (= 1.7.4-3.1ubuntu2), libjsoncpp1 (= 1.7.4-3.1ubuntu2), libk5crypto3 (= 1.17-10), libkeyutils1 (= 1.6.1-2ubuntu1), libkrb5-26-heimdal (= 7.7.0+dfsg-2), libkrb5-3 (= 1.17-10), libkrb5support0 (= 1.17-10), libldap-2.4-2 (= 2.4.53+dfsg-1ubuntu1), liblist-compare-perl (= 0.55-1), liblist-moreutils-perl (= 0.416-1build5), liblist-utilsby-perl (= 0.11-1), liblz4-1 (= 1.9.2-2), liblzma-dev (= 5.2.4-1ubuntu1), liblzma5 (= 5.2.4-1ubuntu1), liblzo2-2 (= 2.10-2), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmarkdown2 (= 2.2.6-1ubuntu1), libmodule-implementation-perl (= 0.09-1), libmodule-runtime-perl (= 0.016-1), libmoo-perl (= 2.004000-1), libmoox-aliases-perl (= 0.001006-1), libmount1 (= 2.36-3ubuntu1), libmouse-perl (= 2.5.10-1build1), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libnamespace-clean-perl (= 0.27-1), libncursesw6 (= 6.2+20200918-1), libnet-domain-tld-perl (= 1.75-1), libnettle8 (= 3.6-2), libnghttp2-14 (= 1.41.0-3), libnsl-dev (= 1.3.0-0ubuntu3), libnsl2 (= 1.3.0-0ubuntu3), libnss-nis (= 3.1-0ubuntu4), libnss-nisplus (= 1.3-0ubuntu4), libnumber-compare-perl (= 0.03-1), libp11-kit0 (= 0.23.21-2build1), libpackage-stash-perl (= 0.38-1), libpam-modules (= 1.3.1-5ubuntu6), libpam-modules-bin (= 1.3.1-5ubuntu6), libpam-runtime (= 1.3.1-5ubuntu6), libpam0g (= 1.3.1-5ubuntu6), libparams-classify-perl (= 0.015-1build2), libparams-util-perl (= 1.101-1), libpath-tiny-perl (= 0.114-1), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libperlio-gzip-perl (= 0.19-1build5), libpipeline1 (= 1.5.3-1), libproc-processtable-perl (= 0.59-2), libpsl5 (= 0.21.0-1.1ubuntu1), libpython3-stdlib (= 3.8.6-1), libpython3.8-minimal (= 3.8.6-1), libpython3.8-stdlib (= 3.8.6-1), libreadline8 (= 8.0-4), libroken18-heimdal (= 7.7.0+dfsg-2), librole-tiny-perl (= 2.001004-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build2), libsasl2-2 (= 2.1.27+dfsg-2ubuntu1), libsasl2-modules-db (= 2.1.27+dfsg-2ubuntu1), libseccomp2 (= 2.4.3-1ubuntu5), libselinux1 (= 3.1-2build1), libsemanage-common (= 3.1-1build1), libsemanage1 (= 3.1-1build1), libsepol1 (= 3.1-1), libsereal-decoder-perl (= 4.018+ds-1), libsereal-encoder-perl (= 4.018+ds-1), libsigsegv2 (= 2.12-2build1), libsmartcols1 (= 2.36-3ubuntu1), libsqlite3-0 (= 3.33.0-1), libssh-4 (= 0.9.4-1ubuntu3), libssl1.1 (= 1.1.1f-1ubuntu4), libssw-dev (= 1.1-11), libssw0 (= 1.1-11), libstdc++-10-dev (= 10.2.0-15ubuntu1), libstdc++6 (= 10.2.0-15ubuntu1), libstrictures-perl (= 2.000006-1), libsub-exporter-perl (= 0.987-1), libsub-exporter-progressive-perl (= 0.001013-1), libsub-identify-perl (= 0.14-1build2), libsub-install-perl (= 0.928-1), libsub-name-perl (= 0.26-1), libsub-override-perl (= 0.09-2), libsub-quote-perl (= 2.006006-1), libsystemd0 (= 246.6-1ubuntu1), libtasn1-6 (= 4.16.0-2), libtext-glob-perl (= 0.11-1), libtext-levenshteinxs-perl (= 0.03-4build7), libtext-markdown-discount-perl (= 0.12-1), libtext-xslate-perl (= 3.5.8-1build1), libtime-duration-perl (= 1.21-1), libtime-moment-perl (= 0.44-1build3), libtimedate-perl (= 2.3300-1), libtinfo6 (= 6.2+20200918-1), libtirpc-common (= 1.2.6-3), libtirpc-dev (= 1.2.6-3), libtirpc3 (= 1.2.6-3), libtool (= 2.4.6-14), libtry-tiny-perl (= 0.30-1), libtype-tiny-perl (= 1.010006-1), libubsan1 (= 10.2.0-15ubuntu1), libuchardet0 (= 0.0.7-1), libudev1 (= 246.6-1ubuntu1), libunicode-utf8-perl (= 0.62-1build1), libunistring2 (= 0.9.10-4), liburi-perl (= 5.05-1), libuuid1 (= 2.36-3ubuntu1), libvariable-magic-perl (= 0.62-1build2), libwind0-heimdal (= 7.7.0+dfsg-2), libxml-libxml-perl (= 2.0134+dfsg-2), libxml-namespacesupport-perl (= 1.12-1), libxml-sax-base-perl (= 1.09-1), libxml-sax-perl (= 1.02+dfsg-1), libxml2 (= 2.9.10+dfsg-6.1), libyaml-0-2 (= 0.2.2-1), libyaml-libyaml-perl (= 0.82+repack-1), libzstd1 (= 1.4.5+dfsg-4), lintian (= 2.99.0ubuntu1), linux-libc-dev (= 5.8.0-25.26), login (= 1:4.8.1-1ubuntu6), lsb-base (= 11.1.0ubuntu2), lzip (= 1.21-8), lzop (= 1.04-1build1), m4 (= 1.4.18-4), make (= 4.3-4ubuntu1), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), mime-support (= 3.64ubuntu1), ncurses-base (= 6.2+20200918-1), ncurses-bin (= 6.2+20200918-1), passwd (= 1:4.8.1-1ubuntu6), patch (= 2.7.6-6), patchutils (= 0.4.2-1), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), pkg-config (= 0.29.2-1ubuntu1), pkg-kde-tools (= 0.15.32ubuntu3), po-debconf (= 1.0.21), python3 (= 3.8.6-1), python3-minimal (= 3.8.6-1), python3.8 (= 3.8.6-1), python3.8-minimal (= 3.8.6-1), readline-common (= 8.0-4), rpcsvc-proto (= 1.4.2-0ubuntu4), sed (= 4.7-1ubuntu1), sensible-utils (= 0.0.13), sysvinit-utils (= 2.96-5ubuntu1), t1utils (= 1.41-4), tar (= 1.30+dfsg-7), ubuntu-keyring (= 2020.06.17.1), ucf (= 3.0043), unzip (= 6.0-25ubuntu1), util-linux (= 2.36-3ubuntu1), xz-utils (= 5.2.4-1ubuntu1), zlib1g (= 1:1.2.11.dfsg-2ubuntu4), zlib1g-dev (= 1:1.2.11.dfsg-2ubuntu4) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1603727513" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libseqlib-dev_1.1.2+dfsg-9_armhf.deb ------------------------------------ new Debian package, version 2.0. size 162492 bytes: control archive=1764 bytes. 1412 bytes, 26 lines control 1663 bytes, 24 lines md5sums Package: libseqlib-dev Source: libseqlib Version: 1.1.2+dfsg-9 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 747 Depends: libseqlib1 (= 1.1.2+dfsg-9), libfml-dev, libhts-dev, libjsoncpp-dev, libssw-dev, zlib1g-dev, libbwa-dev Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/walaj/SeqLib Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev) C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment. . This package contains the header files and static library. drwxr-xr-x root/root 0 2020-10-26 15:51 ./ drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/ drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/include/ drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/include/SeqLib/ -rw-r--r-- root/root 3874 2020-10-26 15:51 ./usr/include/SeqLib/BFC.h -rw-r--r-- root/root 6285 2017-05-12 20:31 ./usr/include/SeqLib/BWAWrapper.h -rw-r--r-- root/root 3605 2020-10-26 15:51 ./usr/include/SeqLib/BamHeader.h -rw-r--r-- root/root 8503 2017-05-12 20:31 ./usr/include/SeqLib/BamReader.h -rw-r--r-- root/root 31497 2020-10-26 15:51 ./usr/include/SeqLib/BamRecord.h -rw-r--r-- root/root 1979 2020-10-26 15:51 ./usr/include/SeqLib/BamWalker.h -rw-r--r-- root/root 3096 2017-05-12 20:31 ./usr/include/SeqLib/BamWriter.h -rw-r--r-- root/root 1139 2017-05-12 20:31 ./usr/include/SeqLib/FastqReader.h -rw-r--r-- root/root 4022 2020-10-26 15:51 ./usr/include/SeqLib/FermiAssembler.h -rw-r--r-- root/root 6129 2017-05-12 20:31 ./usr/include/SeqLib/GenomicRegion.h -rw-r--r-- root/root 19701 2017-05-12 20:31 ./usr/include/SeqLib/GenomicRegionCollection.cpp -rw-r--r-- root/root 11804 2017-05-12 20:31 ./usr/include/SeqLib/GenomicRegionCollection.h -rw-r--r-- root/root 7320 2017-05-12 20:31 ./usr/include/SeqLib/IntervalTree.h -rw-r--r-- root/root 17397 2017-05-12 20:31 ./usr/include/SeqLib/ReadFilter.h -rw-r--r-- root/root 1387 2020-10-26 15:51 ./usr/include/SeqLib/RefGenome.h -rw-r--r-- root/root 3832 2017-05-12 20:31 ./usr/include/SeqLib/SeqLibCommon.h -rw-r--r-- root/root 4176 2017-05-12 20:31 ./usr/include/SeqLib/SeqLibUtils.h -rw-r--r-- root/root 2455 2017-05-12 20:31 ./usr/include/SeqLib/SeqPlot.h -rw-r--r-- root/root 1932 2017-05-12 20:31 ./usr/include/SeqLib/UnalignedSequence.h -rw-r--r-- root/root 17078 2017-05-12 20:31 ./usr/include/SeqLib/aho_corasick.hpp drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/lib/ drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 576308 2020-10-26 15:51 ./usr/lib/arm-linux-gnueabihf/libseqlib.a lrwxrwxrwx root/root 0 2020-10-26 15:51 ./usr/lib/arm-linux-gnueabihf/libseqlib.so -> libseqlib.so.1.0.0 drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/lib/arm-linux-gnueabihf/pkgconfig/ -rw-r--r-- root/root 301 2020-10-26 15:51 ./usr/lib/arm-linux-gnueabihf/pkgconfig/libseqlib.pc drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/share/ drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/share/doc/libseqlib-dev/ lrwxrwxrwx root/root 0 2020-10-26 15:51 ./usr/share/doc/libseqlib-dev/changelog.Debian.gz -> ../libseqlib1/changelog.Debian.gz -rw-r--r-- root/root 2441 2020-10-24 15:20 ./usr/share/doc/libseqlib-dev/copyright drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/share/lintian/ drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 145 2020-02-15 16:39 ./usr/share/lintian/overrides/libseqlib-dev libseqlib1_1.1.2+dfsg-9_armhf.deb --------------------------------- new Debian package, version 2.0. size 104784 bytes: control archive=5464 bytes. 1388 bytes, 24 lines control 229 bytes, 3 lines md5sums 39 bytes, 1 lines shlibs 40786 bytes, 433 lines symbols 74 bytes, 2 lines triggers Package: libseqlib1 Source: libseqlib Version: 1.1.2+dfsg-9 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 266 Depends: libc6 (>= 2.4), libfml0 (>= 0.1), libgcc-s1 (>= 3.5), libhts3 (>= 1.10), libjsoncpp1 (>= 1.7.4), libssw0 (>= 1.1), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/walaj/SeqLib Description: C++ htslib/bwa-mem/fermi interface for interrogating sequence data C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment. drwxr-xr-x root/root 0 2020-10-26 15:51 ./ drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/ drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/lib/ drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2020-10-26 15:51 ./usr/lib/arm-linux-gnueabihf/libseqlib.so.1 -> libseqlib.so.1.0.0 -rw-r--r-- root/root 214436 2020-10-26 15:51 ./usr/lib/arm-linux-gnueabihf/libseqlib.so.1.0.0 drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/share/ drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-10-26 15:51 ./usr/share/doc/libseqlib1/ -rw-r--r-- root/root 1177 2020-10-26 15:51 ./usr/share/doc/libseqlib1/changelog.Debian.gz -rw-r--r-- root/root 2441 2020-10-24 15:20 ./usr/share/doc/libseqlib1/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: n/a Build-Time: 193 Distribution: hirsute-proposed Host Architecture: armhf Install-Time: 70 Job: libseqlib_1.1.2+dfsg-9.dsc Machine Architecture: arm64 Package: libseqlib Package-Time: 268 Source-Version: 1.1.2+dfsg-9 Space: n/a Status: successful Version: 1.1.2+dfsg-9 -------------------------------------------------------------------------------- Finished at 2020-10-29T01:47:41Z Build needed 00:04:28, no disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=hirsute --arch=armhf PACKAGEBUILD-20205415 Scanning for processes to kill in build PACKAGEBUILD-20205415