https://launchpad.net/ubuntu/+source/liggghts/3.8.0+repack1-4/+build/16311982 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux bos02-arm64-013 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:50:27 UTC 2018 aarch64 Buildd toolchain package versions: launchpad-buildd_165 python-lpbuildd_165 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 23 Jan 05:57:55 ntpdate[1839]: adjust time server 10.211.37.1 offset -0.025870 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=armhf PACKAGEBUILD-16311982 /home/buildd/filecache-default/a8e076447bc9c859868a26138221e631724b6c90 Creating target for build PACKAGEBUILD-16311982 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=armhf PACKAGEBUILD-16311982 Starting target for build PACKAGEBUILD-16311982 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=armhf PACKAGEBUILD-16311982 'deb http://ftpmaster.internal/ubuntu disco main universe' 'deb http://ftpmaster.internal/ubuntu disco-security main universe' 'deb http://ftpmaster.internal/ubuntu disco-updates main universe' 'deb http://ftpmaster.internal/ubuntu disco-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-16311982 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=armhf PACKAGEBUILD-16311982 Updating target for build PACKAGEBUILD-16311982 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main armhf Packages [961 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [512 kB] Get:7 http://ftpmaster.internal/ubuntu disco/universe armhf Packages [8708 kB] Get:8 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5213 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main armhf Packages [131 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [61.9 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf Packages [500 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [296 kB] Fetched 16.8 MB in 7s (2480 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libreadline7 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: libreadline8 The following packages will be upgraded: apt bash binutils binutils-arm-linux-gnueabihf binutils-common bsdutils coreutils cpp-8 dash debconf debianutils dpkg dpkg-dev e2fslibs e2fsprogs fdisk findutils g++-8 gcc-8 gcc-8-base gpg gpg-agent gpgconf gpgv grep gzip init init-system-helpers libapt-pkg5.0 libargon2-1 libasan5 libassuan0 libatomic1 libbinutils libblkid1 libcap-ng0 libcc1-0 libcom-err2 libcomerr2 libdpkg-perl libext2fs2 libfdisk1 libgcc-8-dev libgcc1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libjson-c3 liblz4-1 libmount1 libmpfr6 libpng16-16 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libss2 libstdc++-8-dev libstdc++6 libsystemd0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev mount readline-common sed systemd systemd-sysv tar tzdata 74 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 40.1 MB of archives. After this operation, 1566 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main armhf debianutils armhf 4.8.6.1 [84.2 kB] Get:2 http://ftpmaster.internal/ubuntu disco/main armhf bash armhf 5.0-1ubuntu1 [581 kB] Get:3 http://ftpmaster.internal/ubuntu disco-proposed/main armhf bsdutils armhf 1:2.33.1-0.1ubuntu1 [58.0 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed/main armhf coreutils armhf 8.30-1ubuntu1 [1126 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main armhf tar armhf 1.30+dfsg-4 [218 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main armhf dpkg armhf 1.19.2ubuntu2 [1056 kB] Get:7 http://ftpmaster.internal/ubuntu disco-proposed/main armhf debconf all 1.5.70 [122 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main armhf dash armhf 0.5.10.2-4ubuntu1 [78.2 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main armhf findutils armhf 4.6.0+git+20190105-2 [307 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main armhf grep armhf 3.3-1 [138 kB] Get:11 http://ftpmaster.internal/ubuntu disco/main armhf gzip armhf 1.9-3 [89.8 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main armhf sed armhf 4.7-1 [181 kB] Get:13 http://ftpmaster.internal/ubuntu disco/main armhf init-system-helpers all 1.56+nmu1 [38.2 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main armhf libgnutls30 armhf 3.6.5-2ubuntu1 [700 kB] Get:15 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libubsan1 armhf 8.2.0-14ubuntu1 [109 kB] Get:16 http://ftpmaster.internal/ubuntu disco-proposed/main armhf gcc-8-base armhf 8.2.0-14ubuntu1 [18.6 kB] Get:17 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libgcc1 armhf 1:8.2.0-14ubuntu1 [37.0 kB] Get:18 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libgomp1 armhf 8.2.0-14ubuntu1 [66.6 kB] Get:19 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libatomic1 armhf 8.2.0-14ubuntu1 [7052 B] Get:20 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libasan5 armhf 8.2.0-14ubuntu1 [348 kB] Get:21 http://ftpmaster.internal/ubuntu disco-proposed/main armhf cpp-8 armhf 8.2.0-14ubuntu1 [5643 kB] Get:22 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libcc1-0 armhf 8.2.0-14ubuntu1 [32.5 kB] Get:23 http://ftpmaster.internal/ubuntu disco-proposed/main armhf g++-8 armhf 8.2.0-14ubuntu1 [6429 kB] Get:24 http://ftpmaster.internal/ubuntu disco-proposed/main armhf gcc-8 armhf 8.2.0-14ubuntu1 [6353 kB] Get:25 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libgcc-8-dev armhf 8.2.0-14ubuntu1 [633 kB] Get:26 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libstdc++-8-dev armhf 8.2.0-14ubuntu1 [1597 kB] Get:27 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libstdc++6 armhf 8.2.0-14ubuntu1 [349 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main armhf libmpfr6 armhf 4.0.2~rc1-1 [196 kB] Get:29 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libbinutils armhf 2.31.1-11ubuntu1 [309 kB] Get:30 http://ftpmaster.internal/ubuntu disco-proposed/main armhf binutils-common armhf 2.31.1-11ubuntu1 [194 kB] Get:31 http://ftpmaster.internal/ubuntu disco-proposed/main armhf binutils armhf 2.31.1-11ubuntu1 [3348 B] Get:32 http://ftpmaster.internal/ubuntu disco-proposed/main armhf binutils-arm-linux-gnueabihf armhf 2.31.1-11ubuntu1 [2150 kB] Get:33 http://ftpmaster.internal/ubuntu disco-proposed/main armhf liblz4-1 armhf 1.8.3-1ubuntu1 [66.6 kB] Get:34 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libudev1 armhf 240-4ubuntu1 [64.1 kB] Get:35 http://ftpmaster.internal/ubuntu disco/main armhf libzstd1 armhf 1.3.8+dfsg-3 [195 kB] Get:36 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libapt-pkg5.0 armhf 1.8.0~alpha3.1 [733 kB] Get:37 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libgpg-error0 armhf 1.33-3 [49.3 kB] Get:38 http://ftpmaster.internal/ubuntu disco-proposed/main armhf gpgv armhf 2.2.12-1ubuntu2 [167 kB] Get:39 http://ftpmaster.internal/ubuntu disco-proposed/main armhf apt armhf 1.8.0~alpha3.1 [1112 kB] Get:40 http://ftpmaster.internal/ubuntu disco-proposed/main armhf systemd-sysv armhf 240-4ubuntu1 [9376 B] Get:41 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libuuid1 armhf 2.33.1-0.1ubuntu1 [20.2 kB] Get:42 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libblkid1 armhf 2.33.1-0.1ubuntu1 [119 kB] Get:43 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libmount1 armhf 2.33.1-0.1ubuntu1 [129 kB] Get:44 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libsmartcols1 armhf 2.33.1-0.1ubuntu1 [80.7 kB] Get:45 http://ftpmaster.internal/ubuntu disco-proposed/main armhf mount armhf 2.33.1-0.1ubuntu1 [105 kB] Get:46 http://ftpmaster.internal/ubuntu disco-proposed/main armhf systemd armhf 240-4ubuntu1 [3152 kB] Get:47 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libsystemd0 armhf 240-4ubuntu1 [227 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main armhf libext2fs2 armhf 1.44.5-1 [145 kB] Get:49 http://ftpmaster.internal/ubuntu disco/main armhf e2fsprogs armhf 1.44.5-1 [492 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main armhf init armhf 1.56+nmu1 [6080 B] Get:51 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libfdisk1 armhf 2.33.1-0.1ubuntu1 [159 kB] Get:52 http://ftpmaster.internal/ubuntu disco-proposed/main armhf fdisk armhf 2.33.1-0.1ubuntu1 [106 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main armhf libcap-ng0 armhf 0.7.9-2 [9656 B] Get:54 http://ftpmaster.internal/ubuntu disco/main armhf libsemanage-common all 2.8-2 [7016 B] Get:55 http://ftpmaster.internal/ubuntu disco/main armhf libsemanage1 armhf 2.8-2 [72.7 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main armhf libcom-err2 armhf 1.44.5-1 [8468 B] Get:57 http://ftpmaster.internal/ubuntu disco/main armhf libss2 armhf 1.44.5-1 [9324 B] Get:58 http://ftpmaster.internal/ubuntu disco/main armhf libargon2-1 armhf 0~20171227-0.2 [20.0 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main armhf libjson-c3 armhf 0.12.1+ds-2 [20.2 kB] Get:60 http://ftpmaster.internal/ubuntu disco-proposed/main armhf readline-common all 8.0-1 [53.4 kB] Get:61 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libreadline8 armhf 8.0-1 [108 kB] Get:62 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libsqlite3-0 armhf 3.26.0+fossilbc891ac6b-1build1 [450 kB] Get:63 http://ftpmaster.internal/ubuntu disco/main armhf tzdata all 2018i-1 [189 kB] Get:64 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libgdbm6 armhf 1.18.1-2build1 [24.6 kB] Get:65 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libpng16-16 armhf 1.6.36-3 [162 kB] Get:66 http://ftpmaster.internal/ubuntu disco/main armhf dpkg-dev all 1.19.2ubuntu2 [549 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main armhf libdpkg-perl all 1.19.2ubuntu2 [227 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main armhf e2fslibs armhf 1.44.5-1 [2704 B] Get:69 http://ftpmaster.internal/ubuntu disco/main armhf libassuan0 armhf 2.5.2-1 [28.7 kB] Get:70 http://ftpmaster.internal/ubuntu disco-proposed/main armhf gpg armhf 2.2.12-1ubuntu2 [415 kB] Get:71 http://ftpmaster.internal/ubuntu disco-proposed/main armhf gpgconf armhf 2.2.12-1ubuntu2 [105 kB] Get:72 http://ftpmaster.internal/ubuntu disco-proposed/main armhf gpg-agent armhf 2.2.12-1ubuntu2 [191 kB] Get:73 http://ftpmaster.internal/ubuntu disco/main armhf libcomerr2 armhf 1.44.5-1 [2700 B] Get:74 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libgdbm-compat4 armhf 1.18.1-2build1 [5800 B] Get:75 http://ftpmaster.internal/ubuntu disco-proposed/main armhf linux-libc-dev armhf 4.19.0-11.12 [1047 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 40.1 MB in 2s (26.6 MB/s) (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../debianutils_4.8.6.1_armhf.deb ... Unpacking debianutils (4.8.6.1) over (4.8.6) ... Setting up debianutils (4.8.6.1) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../bash_5.0-1ubuntu1_armhf.deb ... Unpacking bash (5.0-1ubuntu1) over (4.4.18-2ubuntu3) ... Setting up bash (5.0-1ubuntu1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.33.1-0.1ubuntu1_armhf.deb ... Unpacking bsdutils (1:2.33.1-0.1ubuntu1) over (1:2.32-0.1ubuntu2) ... Setting up bsdutils (1:2.33.1-0.1ubuntu1) ... (Reading database ... 12402 files and directories currently installed.) Preparing to unpack .../coreutils_8.30-1ubuntu1_armhf.deb ... Unpacking coreutils (8.30-1ubuntu1) over (8.28-1ubuntu2) ... Setting up coreutils (8.30-1ubuntu1) ... 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Current default time zone: 'Etc/UTC' Local time is now: Wed Jan 23 05:58:37 UTC 2019. Universal Time is now: Wed Jan 23 05:58:37 UTC 2019. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up init (1.56+nmu1) ... Setting up linux-libc-dev:armhf (4.19.0-11.12) ... Setting up libmpfr6:armhf (4.0.2~rc1-1) ... Setting up libdpkg-perl (1.19.2ubuntu2) ... Setting up e2fsprogs (1.44.5-1) ... Setting up libgdbm6:armhf (1.18.1-2build1) ... Setting up binutils-common:armhf (2.31.1-11ubuntu1) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up libsqlite3-0:armhf (3.26.0+fossilbc891ac6b-1build1) ... Setting up libcomerr2:armhf (1.44.5-1) ... Setting up libgdbm-compat4:armhf (1.18.1-2build1) ... Setting up libargon2-1:armhf (0~20171227-0.2) ... Setting up libasan5:armhf (8.2.0-14ubuntu1) ... Setting up libassuan0:armhf (2.5.2-1) ... Setting up libreadline8:armhf (8.0-1) ... Setting up libubsan1:armhf (8.2.0-14ubuntu1) ... Setting up cpp-8 (8.2.0-14ubuntu1) ... Setting up libbinutils:armhf (2.31.1-11ubuntu1) ... Setting up gpgconf (2.2.12-1ubuntu2) ... Setting up binutils-arm-linux-gnueabihf (2.31.1-11ubuntu1) ... Setting up gpg-agent (2.2.12-1ubuntu2) ... Setting up libgcc-8-dev:armhf (8.2.0-14ubuntu1) ... Setting up binutils (2.31.1-11ubuntu1) ... Setting up gpg (2.2.12-1ubuntu2) ... Setting up libstdc++-8-dev:armhf (8.2.0-14ubuntu1) ... Setting up gcc-8 (8.2.0-14ubuntu1) ... Setting up g++-8 (8.2.0-14ubuntu1) ... Setting up dpkg-dev (1.19.2ubuntu2) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-16311982 armhf disco-proposed -c chroot:build-PACKAGEBUILD-16311982 --arch=armhf --dist=disco-proposed --nolog liggghts_3.8.0+repack1-4.dsc Initiating build PACKAGEBUILD-16311982 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:50:27 UTC 2018 armv7l sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-013.buildd +==============================================================================+ | liggghts 3.8.0+repack1-4 (armhf) 23 Jan 2019 05:58 | +==============================================================================+ Package: liggghts Version: 3.8.0+repack1-4 Source Version: 3.8.0+repack1-4 Distribution: disco-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf I: NOTICE: Log filtering will replace 'build/liggghts-5teVfs/liggghts-3.8.0+repack1' with '<>' I: NOTICE: Log filtering will replace 'build/liggghts-5teVfs' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-16311982/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- liggghts_3.8.0+repack1-4.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-lwqbU_/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-lwqbU_/apt_archive ./ InRelease Get:2 copy:/<>/resolver-lwqbU_/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-lwqbU_/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-lwqbU_/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-lwqbU_/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (122 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 1 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-lwqbU_/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12437 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: cmake, debhelper (>= 11~), libboost-mpi-dev, libeigen3-dev, libjpeg-dev, libpython-dev, libvtk6-dev, mpi-default-bin, mpi-default-dev Filtered Build-Depends: cmake, debhelper (>= 11~), libboost-mpi-dev, libeigen3-dev, libjpeg-dev, libpython-dev, libvtk6-dev, mpi-default-bin, mpi-default-dev dpkg-deb: building package 'sbuild-build-depends-liggghts-dummy' in '/<>/resolver-4jEdAF/apt_archive/sbuild-build-depends-liggghts-dummy.deb'. Ign:1 copy:/<>/resolver-4jEdAF/apt_archive ./ InRelease Get:2 copy:/<>/resolver-4jEdAF/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-4jEdAF/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-4jEdAF/apt_archive ./ Sources [266 B] Get:5 copy:/<>/resolver-4jEdAF/apt_archive ./ Packages [587 B] Fetched 2972 B in 0s (138 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install liggghts build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data cython debhelper default-libmysqlclient-dev dh-autoreconf dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core gdal-data gettext gettext-base groff-base hdf5-helpers ibverbs-providers icu-devtools intltool-debian iso-codes libaec-dev libaec0 libaom0 libarchive-zip-perl libarchive13 libarmadillo-dev libarmadillo9 libarpack2 libarpack2-dev libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev libavcodec58 libavformat-dev libavformat58 libavutil-dev libavutil56 libblas-dev libblas3 libbluray2 libboost-dev libboost-mpi-dev libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-serialization1.67-dev libboost-serialization1.67.0 libboost1.67-dev libbrotli1 libbsd0 libcairo2 libcap2-bin libcharls-dev libcharls2 libchromaprint1 libcodec2-0.8.1 libcroco3 libcups2 libcurl3-gnutls libcurl4 libcurl4-gnutls-dev libdap-dev libdap25 libdapclient6v5 libdapserver7v5 libdatrie1 libdbus-1-3 libdouble-conversion1 libdrm-amdgpu1 libdrm-common libdrm-dev libdrm-etnaviv1 libdrm-exynos1 libdrm-freedreno1 libdrm-nouveau2 libdrm-omap1 libdrm-radeon1 libdrm-tegra0 libdrm2 libedit2 libegl-mesa0 libegl1 libeigen3-dev libelf1 libepsilon-dev libepsilon1 libevdev2 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libfreexl-dev libfreexl1 libfribidi0 libfyba-dev libfyba0 libgbm1 libgdal-dev libgdal20 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgeos-3.7.1 libgeos-c1v5 libgeos-dev libgeotiff-dev libgeotiff2 libgfortran5 libgif-dev libgif7 libgl1 libgl1-mesa-dev libgl1-mesa-dri libgl2ps-dev libgl2ps1.4 libglapi-mesa libgles1 libgles2 libglib2.0-0 libglu1-mesa libglu1-mesa-dev libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0 libglx0 libgme0 libgraphite2-3 libgsm1 libgssapi-krb5-2 libgssapi3-heimdal libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0 libharfbuzz0b libhcrypto4-heimdal libhdf4-0-alt libhdf4-alt-dev libhdf5-103 libhdf5-cpp-103 libhdf5-dev libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libheimbase1-heimdal libheimntlm0-heimdal libhwloc-dev libhwloc-plugins libhwloc5 libhx509-5-heimdal libhyphen0 libibverbs-dev libibverbs1 libice-dev libice6 libicu-dev libicu63 libimagequant0 libinput-bin libinput10 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-sphinxdoc libjs-underscore libjson-c-dev libjsoncpp-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkml-dev libkmlbase1 libkmlconvenience1 libkmldom1 libkmlengine1 libkmlregionator1 libkmlxsd1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2 libldap-common libllvm7 libltdl-dev libltdl7 liblzma-dev libmagic-mgc libmagic1 libminizip-dev libminizip1 libmp3lame0 libmpg123-0 libmtdev1 libmysqlclient-dev libmysqlclient20 libnetcdf-c++4 libnetcdf-cxx-legacy-dev libnetcdf-dev libnetcdf13 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnspr4 libnss3 libodbc1 libogdi3.2 libogdi3.2-dev libogg-dev libogg0 libopengl0 libopenjp2-7 libopenjp2-7-dev libopenmpi-dev libopenmpi3 libopenmpt0 libopus0 liborc-0.4-0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcre16-3 libpcre2-16-0 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpmix2 libpng-dev libpoppler-dev libpoppler-private-dev libpoppler82 libpq-dev libpq5 libproj-dev libproj13 libpsl5 libpthread-stubs0-dev libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libqhull-dev libqhull-r7 libqhull7 libqt5core5a libqt5dbus5 libqt5gui5 libqt5network5 libqt5opengl5 libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 libqt5sensors5 libqt5webchannel5 libqt5webkit5 libqt5widgets5 librhash0 libroken18-heimdal librsvg2-2 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libshine3 libsigsegv2 libsm-dev libsm6 libsnappy1v5 libsodium23 libsoxr0 libspatialite-dev libspatialite7 libspeex1 libsqlite3-dev libssh-gcrypt-4 libsuperlu-dev libsuperlu5 libswresample-dev libswresample3 libswscale-dev libswscale5 libsz2 libtcl8.6 libthai-data libthai0 libtheora-dev libtheora0 libtiff-dev libtiff5 libtiffxx5 libtk8.6 libtool libtwolame0 libuchardet0 liburiparser-dev liburiparser1 libuv1 libva-drm2 libva-x11-2 libva2 libvdpau1 libvorbis0a libvorbisenc2 libvorbisfile3 libvpx5 libvtk6-dev libvtk6-java libvtk6-jni libvtk6.3 libvtk6.3-qt libwacom-common libwacom2 libwavpack1 libwayland-client0 libwayland-server0 libwebp-dev libwebp6 libwebpdemux2 libwebpmux3 libwind0-heimdal libwoff1 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libx264-155 libx265-165 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render-util0 libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb-xinerama0 libxcb-xkb1 libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev libxft2 libxi6 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxml2-dev libxrender-dev libxrender1 libxshmfence-dev libxshmfence1 libxslt1.1 libxss-dev libxss1 libxt-dev libxt6 libxvidcore4 libxxf86vm-dev libxxf86vm1 libzstd-dev libzvbi-common libzvbi0 m4 man-db mesa-common-dev mime-support mpi-default-bin mpi-default-dev mysql-common ocl-icd-libopencl1 odbcinst odbcinst1debian2 openmpi-bin openmpi-common openssh-client pkg-config po-debconf proj-data python python-asn1crypto python-attr python-autobahn python-automat python-cbor python-cffi-backend python-concurrent.futures python-configparser python-constantly python-cryptography python-enum34 python-future python-hyperlink python-idna python-incremental python-ipaddress python-lz4 python-minimal python-mpi4py python-nacl python-openssl python-pil python-pkg-resources python-pyasn1 python-pyasn1-modules python-qrcode python-service-identity python-six python-snappy python-trie python-trollius python-twisted python-twisted-bin python-twisted-core python-txaio python-u-msgpack python-ubjson python-vtk6 python-wsaccel python-zope.interface python2 python2-minimal python2.7 python2.7-minimal shared-mime-info tcl tcl-dev tcl-vtk6 tcl8.6 tcl8.6-dev tk tk-dev tk8.6 tk8.6-dev ucf unixodbc-dev uuid-dev vtk6 x11-common x11proto-core-dev x11proto-damage-dev x11proto-dev x11proto-fixes-dev x11proto-scrnsaver-dev x11proto-xext-dev x11proto-xf86vidmode-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build cython-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff isoquery lrzip libitpp-dev liblapack-doc libbluray-bdj libboost-doc libboost-graph1.67-dev libboost1.67-doc libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev libboost-context1.67-dev libboost-coroutine1.67-dev libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev libboost-filesystem1.67-dev libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev libboost-program-options1.67-dev libboost-python1.67-dev libboost-random1.67-dev libboost-regex1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev cups-common libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev libeigen3-doc libgdal-doc libgeotiff-epsg geotiff-bin gdal-bin krb5-doc krb5-user libvisual-0.4-plugins gstreamer1.0-tools libhdf4-doc hdf4-tools libhdf5-doc libhwloc-contrib-plugins libice-doc icu-doc liblcms2-utils libtool-doc liblzma-doc netcdf-bin netcdf-doc libmyodbc odbc-postgresql tdsodbc unixodbc-bin ogdi-bin openmpi-doc opus-tools pciutils postgresql-doc-11 proj-bin qt5-image-formats-plugins qtwayland5 qt5-qmltooling-plugins librsvg2-bin lm-sensors libsm-doc speex sqlite3-doc libsuperlu-doc gfortran | fortran95-compiler gcj-jdk vtk6-doc vtk6-examples java-virtual-machine libx11-doc libxcb-doc libxerces-c-doc libxext-doc libxt-doc m4-doc apparmor less www-browser opencl-icd gfortran keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl python-doc python-tk python-attr-doc python-cryptography-doc python-cryptography-vectors python-enum34-doc python-future-doc python-numpy python-nacl-doc python-openssl-doc python-openssl-dbg python-pil-doc python-pil-dbg python-setuptools python-trie-doc python-twisted-bin-dbg python-gtk2 python-glade2 python-pampy python-qt3 python-serial python-wxgtk3.0 python-txaio-doc mayavi2 python2-doc python2.7-doc binfmt-support tcl-doc tcl-tclreadline tcl8.6-doc tk-doc tk8.6-doc Recommended packages: python-dev curl | wget | lynx libaacs0 libpam-cap dbus libarchive-cpio-perl freetype2-doc proj-bin libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs gstreamer1.0-plugins-base javascript-common krb5-locales libcoarrays-openmpi-dev libpng-tools poppler-data publicsuffix qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme geoclue-2.0 libgl1-mesa-glx librsvg2-common libsasl2-modules va-driver-all | va-driver vdpau-driver-all | vdpau-driver libwacom-bin xauth libmail-sendmail-perl python-click python-olefile xterm | x-terminal-emulator The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data cython debhelper default-libmysqlclient-dev dh-autoreconf dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core gdal-data gettext gettext-base groff-base hdf5-helpers ibverbs-providers icu-devtools intltool-debian iso-codes libaec-dev libaec0 libaom0 libarchive-zip-perl libarchive13 libarmadillo-dev libarmadillo9 libarpack2 libarpack2-dev libasn1-8-heimdal libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev libavcodec58 libavformat-dev libavformat58 libavutil-dev libavutil56 libblas-dev libblas3 libbluray2 libboost-dev libboost-mpi-dev libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-serialization1.67-dev libboost-serialization1.67.0 libboost1.67-dev libbrotli1 libbsd0 libcairo2 libcap2-bin libcharls-dev libcharls2 libchromaprint1 libcodec2-0.8.1 libcroco3 libcups2 libcurl3-gnutls libcurl4 libcurl4-gnutls-dev libdap-dev libdap25 libdapclient6v5 libdapserver7v5 libdatrie1 libdbus-1-3 libdouble-conversion1 libdrm-amdgpu1 libdrm-common libdrm-dev libdrm-etnaviv1 libdrm-exynos1 libdrm-freedreno1 libdrm-nouveau2 libdrm-omap1 libdrm-radeon1 libdrm-tegra0 libdrm2 libedit2 libegl-mesa0 libegl1 libeigen3-dev libelf1 libepsilon-dev libepsilon1 libevdev2 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libfreexl-dev libfreexl1 libfribidi0 libfyba-dev libfyba0 libgbm1 libgdal-dev libgdal20 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgeos-3.7.1 libgeos-c1v5 libgeos-dev libgeotiff-dev libgeotiff2 libgfortran5 libgif-dev libgif7 libgl1 libgl1-mesa-dev libgl1-mesa-dri libgl2ps-dev libgl2ps1.4 libglapi-mesa libgles1 libgles2 libglib2.0-0 libglu1-mesa libglu1-mesa-dev libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0 libglx0 libgme0 libgraphite2-3 libgsm1 libgssapi-krb5-2 libgssapi3-heimdal libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0 libharfbuzz0b libhcrypto4-heimdal libhdf4-0-alt libhdf4-alt-dev libhdf5-103 libhdf5-cpp-103 libhdf5-dev libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libheimbase1-heimdal libheimntlm0-heimdal libhwloc-dev libhwloc-plugins libhwloc5 libhx509-5-heimdal libhyphen0 libibverbs-dev libibverbs1 libice-dev libice6 libicu-dev libicu63 libimagequant0 libinput-bin libinput10 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-sphinxdoc libjs-underscore libjson-c-dev libjsoncpp-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkml-dev libkmlbase1 libkmlconvenience1 libkmldom1 libkmlengine1 libkmlregionator1 libkmlxsd1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2 libldap-common libllvm7 libltdl-dev libltdl7 liblzma-dev libmagic-mgc libmagic1 libminizip-dev libminizip1 libmp3lame0 libmpg123-0 libmtdev1 libmysqlclient-dev libmysqlclient20 libnetcdf-c++4 libnetcdf-cxx-legacy-dev libnetcdf-dev libnetcdf13 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnspr4 libnss3 libodbc1 libogdi3.2 libogdi3.2-dev libogg-dev libogg0 libopengl0 libopenjp2-7 libopenjp2-7-dev libopenmpi-dev libopenmpi3 libopenmpt0 libopus0 liborc-0.4-0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcre16-3 libpcre2-16-0 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpmix2 libpng-dev libpoppler-dev libpoppler-private-dev libpoppler82 libpq-dev libpq5 libproj-dev libproj13 libpsl5 libpthread-stubs0-dev libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libqhull-dev libqhull-r7 libqhull7 libqt5core5a libqt5dbus5 libqt5gui5 libqt5network5 libqt5opengl5 libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 libqt5sensors5 libqt5webchannel5 libqt5webkit5 libqt5widgets5 librhash0 libroken18-heimdal librsvg2-2 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libshine3 libsigsegv2 libsm-dev libsm6 libsnappy1v5 libsodium23 libsoxr0 libspatialite-dev libspatialite7 libspeex1 libsqlite3-dev libssh-gcrypt-4 libsuperlu-dev libsuperlu5 libswresample-dev libswresample3 libswscale-dev libswscale5 libsz2 libtcl8.6 libthai-data libthai0 libtheora-dev libtheora0 libtiff-dev libtiff5 libtiffxx5 libtk8.6 libtool libtwolame0 libuchardet0 liburiparser-dev liburiparser1 libuv1 libva-drm2 libva-x11-2 libva2 libvdpau1 libvorbis0a libvorbisenc2 libvorbisfile3 libvpx5 libvtk6-dev libvtk6-java libvtk6-jni libvtk6.3 libvtk6.3-qt libwacom-common libwacom2 libwavpack1 libwayland-client0 libwayland-server0 libwebp-dev libwebp6 libwebpdemux2 libwebpmux3 libwind0-heimdal libwoff1 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libx264-155 libx265-165 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render-util0 libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb-xinerama0 libxcb-xkb1 libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev libxft2 libxi6 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxml2-dev libxrender-dev libxrender1 libxshmfence-dev libxshmfence1 libxslt1.1 libxss-dev libxss1 libxt-dev libxt6 libxvidcore4 libxxf86vm-dev libxxf86vm1 libzstd-dev libzvbi-common libzvbi0 m4 man-db mesa-common-dev mime-support mpi-default-bin mpi-default-dev mysql-common ocl-icd-libopencl1 odbcinst odbcinst1debian2 openmpi-bin openmpi-common openssh-client pkg-config po-debconf proj-data python python-asn1crypto python-attr python-autobahn python-automat python-cbor python-cffi-backend python-concurrent.futures python-configparser python-constantly python-cryptography python-enum34 python-future python-hyperlink python-idna python-incremental python-ipaddress python-lz4 python-minimal python-mpi4py python-nacl python-openssl python-pil python-pkg-resources python-pyasn1 python-pyasn1-modules python-qrcode python-service-identity python-six python-snappy python-trie python-trollius python-twisted python-twisted-bin python-twisted-core python-txaio python-u-msgpack python-ubjson python-vtk6 python-wsaccel python-zope.interface python2 python2-minimal python2.7 python2.7-minimal sbuild-build-depends-liggghts-dummy shared-mime-info tcl tcl-dev tcl-vtk6 tcl8.6 tcl8.6-dev tk tk-dev tk8.6 tk8.6-dev ucf unixodbc-dev uuid-dev vtk6 x11-common x11proto-core-dev x11proto-damage-dev x11proto-dev x11proto-fixes-dev x11proto-scrnsaver-dev x11proto-xext-dev x11proto-xf86vidmode-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 508 newly installed, 0 to remove and 1 not upgraded. Need to get 251 MB of archives. After this operation, 1123 MB of additional disk space will be used. Get:1 copy:/<>/resolver-4jEdAF/apt_archive ./ sbuild-build-depends-liggghts-dummy 0.invalid.0 [912 B] Get:2 http://ftpmaster.internal/ubuntu disco/main armhf libxau6 armhf 1:1.0.8-1 [7324 B] Get:3 http://ftpmaster.internal/ubuntu disco/main armhf libbsd0 armhf 0.9.1-1 [43.1 kB] Get:4 http://ftpmaster.internal/ubuntu disco/main armhf libxdmcp6 armhf 1:1.1.2-3 [9316 B] Get:5 http://ftpmaster.internal/ubuntu disco/main armhf libxcb1 armhf 1.13.1-2 [40.8 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main armhf libx11-data all 2:1.6.7-1 [113 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main armhf libx11-6 armhf 2:1.6.7-1 [515 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main armhf libxext6 armhf 2:1.3.3-1 [25.1 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main armhf bsdmainutils armhf 11.1.2ubuntu2 [176 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main armhf libuchardet0 armhf 0.0.6-3 [62.1 kB] Get:11 http://ftpmaster.internal/ubuntu disco/main armhf groff-base armhf 1.22.4-2 [772 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main armhf libpipeline1 armhf 1.5.0-2 [21.5 kB] Get:13 http://ftpmaster.internal/ubuntu disco/main armhf man-db armhf 2.8.5-1 [1068 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main armhf libogg0 armhf 1.3.2-1 [14.6 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main armhf libglvnd0 armhf 1.1.0-1 [48.5 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main armhf libdrm-common all 2.4.95-1 [5000 B] Get:17 http://ftpmaster.internal/ubuntu disco/main armhf libdrm2 armhf 2.4.95-1 [26.7 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main armhf libexpat1 armhf 2.2.6-1 [60.1 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main armhf libwayland-server0 armhf 1.16.0-1ubuntu2 [23.6 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main armhf libgbm1 armhf 18.3.2-1ubuntu1 [24.5 kB] Get:21 http://ftpmaster.internal/ubuntu disco/main armhf libglapi-mesa armhf 18.3.2-1ubuntu1 [30.8 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main armhf libwayland-client0 armhf 1.16.0-1ubuntu2 [18.7 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main armhf libx11-xcb1 armhf 2:1.6.7-1 [9104 B] Get:24 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-dri2-0 armhf 1.13.1-2 [6676 B] Get:25 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-dri3-0 armhf 1.13.1-2 [6288 B] Get:26 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-present0 armhf 1.13.1-2 [5424 B] Get:27 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-sync1 armhf 1.13.1-2 [8240 B] Get:28 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-xfixes0 armhf 1.13.1-2 [9004 B] Get:29 http://ftpmaster.internal/ubuntu disco/main armhf libxshmfence1 armhf 1.3-1 [4792 B] Get:30 http://ftpmaster.internal/ubuntu disco/main armhf libegl-mesa0 armhf 18.3.2-1ubuntu1 [79.8 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main armhf libegl1 armhf 1.1.0-1 [26.3 kB] Get:32 http://ftpmaster.internal/ubuntu disco/main armhf libgles2 armhf 1.1.0-1 [17.9 kB] Get:33 http://ftpmaster.internal/ubuntu disco/main armhf libglib2.0-0 armhf 2.58.1-2 [1024 kB] Get:34 http://ftpmaster.internal/ubuntu disco/main armhf libcap2-bin armhf 1:2.25-1.2 [20.1 kB] Get:35 http://ftpmaster.internal/ubuntu disco/main armhf libgstreamer1.0-0 armhf 1.14.4-1 [793 kB] Get:36 http://ftpmaster.internal/ubuntu disco/main armhf liborc-0.4-0 armhf 1:0.4.28-3.1 [117 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main armhf iso-codes all 4.1-1 [2632 kB] Get:38 http://ftpmaster.internal/ubuntu disco/main armhf libgstreamer-plugins-base1.0-0 armhf 1.14.4-1ubuntu1 [620 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main armhf libhyphen0 armhf 2.8.8-7 [24.4 kB] Get:40 http://ftpmaster.internal/ubuntu disco/main armhf libicu63 armhf 63.1-5 [7991 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main armhf libjpeg-turbo8 armhf 2.0.1-0ubuntu1 [89.9 kB] Get:42 http://ftpmaster.internal/ubuntu disco/main armhf libjpeg8 armhf 8c-2ubuntu8 [2202 B] Get:43 http://ftpmaster.internal/ubuntu disco/universe armhf libdouble-conversion1 armhf 3.1.0-2 [37.7 kB] Get:44 http://ftpmaster.internal/ubuntu disco/universe armhf libpcre2-16-0 armhf 10.32-3 [146 kB] Get:45 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5core5a armhf 5.11.3+dfsg-2ubuntu1 [1648 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main armhf libfreetype6 armhf 2.9.1-3 [278 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main armhf ucf all 3.0038+nmu1 [51.6 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main armhf fonts-dejavu-core all 2.37-1 [1041 kB] Get:49 http://ftpmaster.internal/ubuntu disco/main armhf fontconfig-config all 2.13.0-5ubuntu3 [28.4 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main armhf libfontconfig1 armhf 2.13.0-5ubuntu3 [93.9 kB] Get:51 http://ftpmaster.internal/ubuntu disco/main armhf fontconfig armhf 2.13.0-5ubuntu3 [168 kB] Get:52 http://ftpmaster.internal/ubuntu disco/main armhf libgraphite2-3 armhf 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http://ftpmaster.internal/ubuntu disco/main armhf libdbus-1-3 armhf 1.12.10-1ubuntu2 [154 kB] Get:64 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5dbus5 armhf 5.11.3+dfsg-2ubuntu1 [173 kB] Get:65 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5network5 armhf 5.11.3+dfsg-2ubuntu1 [561 kB] Get:66 http://ftpmaster.internal/ubuntu disco/main armhf libsm6 armhf 2:1.2.2-1 [13.9 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-icccm4 armhf 0.4.1-1.1 [9704 B] Get:68 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-shm0 armhf 1.13.1-2 [5380 B] Get:69 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-util1 armhf 0.4.0-0ubuntu3 [10.3 kB] Get:70 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-image0 armhf 0.4.0-1build1 [11.1 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-keysyms1 armhf 0.4.0-1 [7796 B] Get:72 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-randr0 armhf 1.13.1-2 [15.3 kB] Get:73 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-render0 armhf 1.13.1-2 [13.9 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-render-util0 armhf 0.3.9-1 [8858 B] Get:75 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-shape0 armhf 1.13.1-2 [5644 B] Get:76 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-xinerama0 armhf 1.13.1-2 [5128 B] Get:77 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-xkb1 armhf 1.13.1-2 [26.1 kB] Get:78 http://ftpmaster.internal/ubuntu disco/main armhf libxi6 armhf 2:1.7.9-1 [26.1 kB] Get:79 http://ftpmaster.internal/ubuntu disco/main armhf xkb-data all 2.23.1-1ubuntu1.18.10.1 [325 kB] Get:80 http://ftpmaster.internal/ubuntu disco/main armhf libxkbcommon0 armhf 0.8.2-1 [86.2 kB] Get:81 http://ftpmaster.internal/ubuntu disco/main armhf libxkbcommon-x11-0 armhf 0.8.2-1 [12.1 kB] Get:82 http://ftpmaster.internal/ubuntu disco/main armhf libxrender1 armhf 1:0.9.10-1 [15.6 kB] Get:83 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5gui5 armhf 5.11.3+dfsg-2ubuntu1 [2230 kB] Get:84 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5positioning5 armhf 5.11.3+dfsg-2 [161 kB] Get:85 http://ftpmaster.internal/ubuntu disco/main armhf libavahi-common-data armhf 0.7-4ubuntu4 [21.4 kB] Get:86 http://ftpmaster.internal/ubuntu disco/main armhf libavahi-common3 armhf 0.7-4ubuntu4 [18.2 kB] Get:87 http://ftpmaster.internal/ubuntu disco/main armhf libavahi-client3 armhf 0.7-4ubuntu4 [21.7 kB] Get:88 http://ftpmaster.internal/ubuntu disco/main armhf libkrb5support0 armhf 1.17-1 [30.0 kB] Get:89 http://ftpmaster.internal/ubuntu disco/main armhf libk5crypto3 armhf 1.17-1 [83.8 kB] Get:90 http://ftpmaster.internal/ubuntu disco/main armhf libkeyutils1 armhf 1.5.9-9.3 [8660 B] Get:91 http://ftpmaster.internal/ubuntu disco/main armhf libkrb5-3 armhf 1.17-1 [286 kB] Get:92 http://ftpmaster.internal/ubuntu disco/main armhf libgssapi-krb5-2 armhf 1.17-1 [101 kB] Get:93 http://ftpmaster.internal/ubuntu disco/main armhf libcups2 armhf 2.2.10-3 [179 kB] Get:94 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5widgets5 armhf 5.11.3+dfsg-2ubuntu1 [1937 kB] Get:95 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5printsupport5 armhf 5.11.3+dfsg-2ubuntu1 [172 kB] Get:96 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5qml5 armhf 5.11.3-2build1 [1069 kB] Get:97 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5quick5 armhf 5.11.3-2build1 [1061 kB] Get:98 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5sensors5 armhf 5.11.3-2 [95.2 kB] Get:99 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5webchannel5 armhf 5.11.3-2 [41.8 kB] Get:100 http://ftpmaster.internal/ubuntu disco/main armhf libwebp6 armhf 0.6.1-2 [152 kB] Get:101 http://ftpmaster.internal/ubuntu disco/main armhf libbrotli1 armhf 1.0.7-2 [259 kB] Get:102 http://ftpmaster.internal/ubuntu disco/main armhf libwoff1 armhf 1.0.2-1build1 [35.3 kB] Get:103 http://ftpmaster.internal/ubuntu disco/main armhf libxml2 armhf 2.9.4+dfsg1-7ubuntu3 [533 kB] Get:104 http://ftpmaster.internal/ubuntu disco/main armhf libxslt1.1 armhf 1.1.32-2 [131 kB] Get:105 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5webkit5 armhf 5.212.0~alpha2-19ubuntu1 [9314 kB] Get:106 http://ftpmaster.internal/ubuntu disco/main armhf libxxf86vm1 armhf 1:1.1.4-1 [9770 B] Get:107 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libpython2.7-minimal armhf 2.7.15-5build1 [335 kB] Get:108 http://ftpmaster.internal/ubuntu disco-proposed/main armhf python2.7-minimal armhf 2.7.15-5build1 [1104 kB] Get:109 http://ftpmaster.internal/ubuntu disco-proposed/main armhf python2-minimal armhf 2.7.15-4 [28.0 kB] Get:110 http://ftpmaster.internal/ubuntu disco-proposed/main armhf python-minimal armhf 2.7.15-4 [5980 B] Get:111 http://ftpmaster.internal/ubuntu disco/main armhf mime-support all 3.60ubuntu1 [30.1 kB] Get:112 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libpython2.7-stdlib armhf 2.7.15-5build1 [1833 kB] Get:113 http://ftpmaster.internal/ubuntu disco-proposed/main armhf python2.7 armhf 2.7.15-5build1 [239 kB] Get:114 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libpython2-stdlib armhf 2.7.15-4 [7592 B] Get:115 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libpython-stdlib armhf 2.7.15-4 [5824 B] Get:116 http://ftpmaster.internal/ubuntu disco-proposed/main armhf python2 armhf 2.7.15-4 [26.5 kB] Get:117 http://ftpmaster.internal/ubuntu disco-proposed/main armhf python armhf 2.7.15-4 [7832 B] Get:118 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libmagic-mgc armhf 1:5.35-2 [200 kB] Get:119 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libmagic1 armhf 1:5.35-2 [66.3 kB] Get:120 http://ftpmaster.internal/ubuntu disco-proposed/main armhf file armhf 1:5.35-2 [22.0 kB] Get:121 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libelf1 armhf 0.175-2 [41.0 kB] Get:122 http://ftpmaster.internal/ubuntu disco/main armhf libfribidi0 armhf 1.0.5-3.1 [24.3 kB] Get:123 http://ftpmaster.internal/ubuntu disco/main armhf shared-mime-info armhf 1.10-1 [426 kB] Get:124 http://ftpmaster.internal/ubuntu disco/main armhf gettext-base armhf 0.19.8.1-9 [46.0 kB] Get:125 http://ftpmaster.internal/ubuntu disco/main armhf libedit2 armhf 3.1-20181209-1 [71.3 kB] Get:126 http://ftpmaster.internal/ubuntu disco/main armhf libpsl5 armhf 0.20.2-2 [48.7 kB] Get:127 http://ftpmaster.internal/ubuntu disco/main armhf openssh-client armhf 1:7.9p1-5 [523 kB] Get:128 http://ftpmaster.internal/ubuntu disco/main armhf libsigsegv2 armhf 2.12-2 [13.1 kB] Get:129 http://ftpmaster.internal/ubuntu disco/main armhf m4 armhf 1.4.18-2 [186 kB] Get:130 http://ftpmaster.internal/ubuntu disco/main armhf autoconf all 2.69-11 [322 kB] Get:131 http://ftpmaster.internal/ubuntu disco/main armhf autotools-dev all 20180224.1 [39.6 kB] Get:132 http://ftpmaster.internal/ubuntu disco/main armhf automake all 1:1.16.1-4 [522 kB] Get:133 http://ftpmaster.internal/ubuntu disco/main armhf autopoint all 0.19.8.1-9 [412 kB] Get:134 http://ftpmaster.internal/ubuntu disco/main armhf cmake-data all 3.13.2-1 [1457 kB] Get:135 http://ftpmaster.internal/ubuntu disco/main armhf libarchive13 armhf 3.3.3-3 [268 kB] Get:136 http://ftpmaster.internal/ubuntu disco/main armhf libroken18-heimdal armhf 7.5.0+dfsg-2.1 [34.0 kB] Get:137 http://ftpmaster.internal/ubuntu disco/main armhf libasn1-8-heimdal armhf 7.5.0+dfsg-2.1 [138 kB] Get:138 http://ftpmaster.internal/ubuntu disco/main armhf libheimbase1-heimdal armhf 7.5.0+dfsg-2.1 [24.0 kB] Get:139 http://ftpmaster.internal/ubuntu disco/main armhf libhcrypto4-heimdal armhf 7.5.0+dfsg-2.1 [76.7 kB] Get:140 http://ftpmaster.internal/ubuntu disco/main armhf libwind0-heimdal armhf 7.5.0+dfsg-2.1 [47.1 kB] Get:141 http://ftpmaster.internal/ubuntu disco/main armhf libhx509-5-heimdal armhf 7.5.0+dfsg-2.1 [87.8 kB] Get:142 http://ftpmaster.internal/ubuntu disco/main armhf libkrb5-26-heimdal armhf 7.5.0+dfsg-2.1 [167 kB] Get:143 http://ftpmaster.internal/ubuntu disco/main armhf libheimntlm0-heimdal armhf 7.5.0+dfsg-2.1 [13.1 kB] Get:144 http://ftpmaster.internal/ubuntu disco/main armhf libgssapi3-heimdal armhf 7.5.0+dfsg-2.1 [78.7 kB] Get:145 http://ftpmaster.internal/ubuntu disco/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-1 [13.2 kB] Get:146 http://ftpmaster.internal/ubuntu disco/main armhf libsasl2-2 armhf 2.1.27+dfsg-1 [42.2 kB] Get:147 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libldap-common all 2.4.47+dfsg-2ubuntu1 [16.2 kB] Get:148 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libldap-2.4-2 armhf 2.4.47+dfsg-2ubuntu1 [131 kB] Get:149 http://ftpmaster.internal/ubuntu disco/main armhf libnghttp2-14 armhf 1.35.1-1 [68.3 kB] Get:150 http://ftpmaster.internal/ubuntu disco/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [49.2 kB] Get:151 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libcurl4 armhf 7.63.0-1 [190 kB] Get:152 http://ftpmaster.internal/ubuntu disco/main armhf libjsoncpp1 armhf 1.7.4-3 [65.9 kB] Get:153 http://ftpmaster.internal/ubuntu disco/main armhf librhash0 armhf 1.3.7-1 [106 kB] Get:154 http://ftpmaster.internal/ubuntu disco/main armhf libuv1 armhf 1.24.1-1 [58.0 kB] Get:155 http://ftpmaster.internal/ubuntu disco/main armhf cmake armhf 3.13.2-1 [2832 kB] Get:156 http://ftpmaster.internal/ubuntu disco/universe armhf cython armhf 0.29.2-2build1 [1267 kB] Get:157 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libtool all 2.4.6-8 [195 kB] Get:158 http://ftpmaster.internal/ubuntu disco/main armhf dh-autoreconf all 19 [16.1 kB] Get:159 http://ftpmaster.internal/ubuntu disco/main armhf libarchive-zip-perl all 1.64-1 [84.9 kB] Get:160 http://ftpmaster.internal/ubuntu disco/main armhf libfile-stripnondeterminism-perl all 1.1.0-1 [13.6 kB] Get:161 http://ftpmaster.internal/ubuntu disco/main armhf dh-strip-nondeterminism all 1.1.0-1 [5100 B] Get:162 http://ftpmaster.internal/ubuntu disco/main armhf dwz armhf 0.12-3 [72.1 kB] Get:163 http://ftpmaster.internal/ubuntu disco/main armhf libcroco3 armhf 0.6.12-3 [69.6 kB] Get:164 http://ftpmaster.internal/ubuntu disco/main armhf gettext armhf 0.19.8.1-9 [833 kB] Get:165 http://ftpmaster.internal/ubuntu disco-proposed/main armhf intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:166 http://ftpmaster.internal/ubuntu disco/main armhf po-debconf all 1.0.21 [233 kB] Get:167 http://ftpmaster.internal/ubuntu disco/main armhf debhelper all 12ubuntu1 [887 kB] Get:168 http://ftpmaster.internal/ubuntu disco/main armhf mysql-common all 5.8+1.0.5 [7352 B] Get:169 http://ftpmaster.internal/ubuntu disco/main armhf libmysqlclient20 armhf 5.7.24-3 [753 kB] Get:170 http://ftpmaster.internal/ubuntu disco/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-0ubuntu2 [168 kB] Get:171 http://ftpmaster.internal/ubuntu disco/main armhf libmysqlclient-dev armhf 5.7.24-3 [1106 kB] Get:172 http://ftpmaster.internal/ubuntu disco/main armhf default-libmysqlclient-dev armhf 1.0.5 [3792 B] Get:173 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf gdal-data all 2.4.0+dfsg-1build1 [514 kB] Get:174 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf hdf5-helpers armhf 1.10.4+repack-9 [14.0 kB] Get:175 http://ftpmaster.internal/ubuntu disco/main armhf libnl-3-200 armhf 3.4.0-1 [46.1 kB] Get:176 http://ftpmaster.internal/ubuntu disco/main armhf libnl-route-3-200 armhf 3.4.0-1 [124 kB] Get:177 http://ftpmaster.internal/ubuntu disco/main armhf libibverbs1 armhf 21.0-1 [43.1 kB] Get:178 http://ftpmaster.internal/ubuntu disco/main armhf ibverbs-providers armhf 21.0-1 [18.5 kB] Get:179 http://ftpmaster.internal/ubuntu disco/main armhf icu-devtools armhf 63.1-5 [163 kB] Get:180 http://ftpmaster.internal/ubuntu disco/universe armhf libaec0 armhf 1.0.2-1 [19.1 kB] Get:181 http://ftpmaster.internal/ubuntu disco/universe armhf libaom0 armhf 1.0.0-3 [775 kB] Get:182 http://ftpmaster.internal/ubuntu disco/main armhf libblas3 armhf 3.8.0-2 [98.5 kB] Get:183 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libgfortran5 armhf 8.2.0-14ubuntu1 [220 kB] Get:184 http://ftpmaster.internal/ubuntu disco/main armhf liblapack3 armhf 3.8.0-2 [1619 kB] Get:185 http://ftpmaster.internal/ubuntu disco/universe armhf libarpack2 armhf 3.7.0-1 [78.0 kB] Get:186 http://ftpmaster.internal/ubuntu disco/universe armhf libsuperlu5 armhf 5.2.1+dfsg1-3build1 [131 kB] Get:187 http://ftpmaster.internal/ubuntu disco/universe armhf libarmadillo9 armhf 1:9.200.7+dfsg-1 [83.9 kB] Get:188 http://ftpmaster.internal/ubuntu disco/main armhf libblas-dev armhf 3.8.0-2 [105 kB] Get:189 http://ftpmaster.internal/ubuntu disco/main armhf liblapack-dev armhf 3.8.0-2 [1667 kB] Get:190 http://ftpmaster.internal/ubuntu disco/universe armhf libarpack2-dev armhf 3.7.0-1 [89.4 kB] Get:191 http://ftpmaster.internal/ubuntu disco/universe armhf libsz2 armhf 1.0.2-1 [5072 B] Get:192 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libhdf5-103 armhf 1.10.4+repack-9 [1263 kB] Get:193 http://ftpmaster.internal/ubuntu disco/main armhf libjpeg-turbo8-dev armhf 2.0.1-0ubuntu1 [203 kB] Get:194 http://ftpmaster.internal/ubuntu disco/main armhf libjpeg8-dev armhf 8c-2ubuntu8 [1554 B] Get:195 http://ftpmaster.internal/ubuntu disco/main armhf libjpeg-dev armhf 8c-2ubuntu8 [1554 B] Get:196 http://ftpmaster.internal/ubuntu disco/universe armhf libaec-dev armhf 1.0.2-1 [16.3 kB] Get:197 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libhdf5-cpp-103 armhf 1.10.4+repack-9 [99.5 kB] Get:198 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libhdf5-dev armhf 1.10.4+repack-9 [2492 kB] Get:199 http://ftpmaster.internal/ubuntu disco/universe armhf libsuperlu-dev armhf 5.2.1+dfsg1-3build1 [16.3 kB] Get:200 http://ftpmaster.internal/ubuntu disco/universe armhf libarmadillo-dev armhf 1:9.200.7+dfsg-1 [356 kB] Get:201 http://ftpmaster.internal/ubuntu disco/universe armhf libva2 armhf 2.3.0-2 [42.8 kB] Get:202 http://ftpmaster.internal/ubuntu disco/universe armhf libva-drm2 armhf 2.3.0-2 [6060 B] Get:203 http://ftpmaster.internal/ubuntu disco/main armhf libxfixes3 armhf 1:5.0.3-1 [9390 B] Get:204 http://ftpmaster.internal/ubuntu disco/universe armhf libva-x11-2 armhf 2.3.0-2 [9416 B] Get:205 http://ftpmaster.internal/ubuntu disco/main armhf libvdpau1 armhf 1.1.1-8ubuntu1 [23.7 kB] Get:206 http://ftpmaster.internal/ubuntu disco/universe armhf libavutil56 armhf 7:4.1-1 [201 kB] Get:207 http://ftpmaster.internal/ubuntu disco/main armhf libpixman-1-0 armhf 0.36.0-1 [157 kB] Get:208 http://ftpmaster.internal/ubuntu disco/main armhf libcairo2 armhf 1.16.0-2 [511 kB] Get:209 http://ftpmaster.internal/ubuntu disco/universe armhf libcodec2-0.8.1 armhf 0.8.1-2 [216 kB] Get:210 http://ftpmaster.internal/ubuntu disco/universe armhf libgsm1 armhf 1.0.18-1 [23.3 kB] Get:211 http://ftpmaster.internal/ubuntu disco/main armhf libmp3lame0 armhf 3.100-2build1 [120 kB] Get:212 http://ftpmaster.internal/ubuntu disco/universe armhf libopenjp2-7 armhf 2.3.0-1.1 [126 kB] Get:213 http://ftpmaster.internal/ubuntu disco/main armhf libopus0 armhf 1.3-1 [173 kB] Get:214 http://ftpmaster.internal/ubuntu disco/main armhf libjbig0 armhf 2.1-3.1build1 [23.9 kB] Get:215 http://ftpmaster.internal/ubuntu disco/main armhf libtiff5 armhf 4.0.10-3 [139 kB] Get:216 http://ftpmaster.internal/ubuntu disco/main armhf libgdk-pixbuf2.0-common all 2.38.0+dfsg-7 [6080 B] Get:217 http://ftpmaster.internal/ubuntu disco/main armhf libgdk-pixbuf2.0-0 armhf 2.38.0+dfsg-7 [153 kB] Get:218 http://ftpmaster.internal/ubuntu disco/main armhf libthai-data all 0.1.28-1 [134 kB] Get:219 http://ftpmaster.internal/ubuntu disco/main armhf libdatrie1 armhf 0.2.12-1 [15.0 kB] Get:220 http://ftpmaster.internal/ubuntu disco/main armhf libthai0 armhf 0.1.28-1 [14.7 kB] Get:221 http://ftpmaster.internal/ubuntu disco/main armhf libpango-1.0-0 armhf 1.42.4-6 [138 kB] Get:222 http://ftpmaster.internal/ubuntu disco/main armhf libpangoft2-1.0-0 armhf 1.42.4-6 [30.0 kB] Get:223 http://ftpmaster.internal/ubuntu disco/main armhf libpangocairo-1.0-0 armhf 1.42.4-6 [19.5 kB] Get:224 http://ftpmaster.internal/ubuntu disco/main armhf librsvg2-2 armhf 2.44.10-1 [920 kB] Get:225 http://ftpmaster.internal/ubuntu disco/universe armhf libshine3 armhf 3.1.1-2 [21.6 kB] Get:226 http://ftpmaster.internal/ubuntu disco/main armhf libsnappy1v5 armhf 1.1.7-1 [14.3 kB] Get:227 http://ftpmaster.internal/ubuntu disco/main armhf libspeex1 armhf 1.2~rc1.2-1ubuntu2 [43.7 kB] Get:228 http://ftpmaster.internal/ubuntu disco/main armhf libsoxr0 armhf 0.1.2-3 [51.1 kB] Get:229 http://ftpmaster.internal/ubuntu disco/universe armhf libswresample3 armhf 7:4.1-1 [50.9 kB] Get:230 http://ftpmaster.internal/ubuntu disco/main armhf libtheora0 armhf 1.1.1+dfsg.1-14 [146 kB] Get:231 http://ftpmaster.internal/ubuntu disco/main armhf libtwolame0 armhf 0.3.13-4 [42.4 kB] Get:232 http://ftpmaster.internal/ubuntu disco/main armhf libvorbis0a armhf 1.3.6-1 [75.7 kB] Get:233 http://ftpmaster.internal/ubuntu disco/main armhf libvorbisenc2 armhf 1.3.6-1 [64.4 kB] Get:234 http://ftpmaster.internal/ubuntu disco/main armhf libvpx5 armhf 1.7.0-3 [449 kB] Get:235 http://ftpmaster.internal/ubuntu disco/main armhf libwavpack1 armhf 5.1.0-5 [65.3 kB] Get:236 http://ftpmaster.internal/ubuntu disco/main armhf libwebpmux3 armhf 0.6.1-2 [16.0 kB] Get:237 http://ftpmaster.internal/ubuntu disco/universe armhf libx264-155 armhf 2:0.155.2917+git0a84d98-2 [438 kB] Get:238 http://ftpmaster.internal/ubuntu disco/universe armhf libx265-165 armhf 2.9-3 [526 kB] Get:239 http://ftpmaster.internal/ubuntu disco/universe armhf libxvidcore4 armhf 2:1.3.5-1 [163 kB] Get:240 http://ftpmaster.internal/ubuntu disco/universe armhf libzvbi-common all 0.2.35-16 [32.4 kB] Get:241 http://ftpmaster.internal/ubuntu disco/universe armhf libzvbi0 armhf 0.2.35-16 [208 kB] Get:242 http://ftpmaster.internal/ubuntu disco/universe armhf libavcodec58 armhf 7:4.1-1 [4479 kB] Get:243 http://ftpmaster.internal/ubuntu disco/universe armhf libavutil-dev armhf 7:4.1-1 [317 kB] Get:244 http://ftpmaster.internal/ubuntu disco/universe armhf libswresample-dev armhf 7:4.1-1 [59.6 kB] Get:245 http://ftpmaster.internal/ubuntu disco/universe armhf libavcodec-dev armhf 7:4.1-1 [5003 kB] Get:246 http://ftpmaster.internal/ubuntu disco/universe armhf libbluray2 armhf 1:1.0.2-3 [128 kB] Get:247 http://ftpmaster.internal/ubuntu disco/universe armhf libchromaprint1 armhf 1.4.3-3 [33.4 kB] Get:248 http://ftpmaster.internal/ubuntu disco/universe armhf libgme0 armhf 0.6.2-1 [106 kB] Get:249 http://ftpmaster.internal/ubuntu disco/main armhf libmpg123-0 armhf 1.25.10-2 [110 kB] Get:250 http://ftpmaster.internal/ubuntu disco/main armhf libvorbisfile3 armhf 1.3.6-1 [15.2 kB] Get:251 http://ftpmaster.internal/ubuntu disco/universe armhf libopenmpt0 armhf 0.4.1-1 [529 kB] Get:252 http://ftpmaster.internal/ubuntu disco/main armhf libssh-gcrypt-4 armhf 0.8.6-2 [165 kB] Get:253 http://ftpmaster.internal/ubuntu disco/universe armhf libavformat58 armhf 7:4.1-1 [895 kB] Get:254 http://ftpmaster.internal/ubuntu disco/universe armhf libavformat-dev armhf 7:4.1-1 [1131 kB] Get:255 http://ftpmaster.internal/ubuntu disco/main armhf libboost1.67-dev armhf 1.67.0-11 [8362 kB] Get:256 http://ftpmaster.internal/ubuntu disco/main armhf libboost-dev armhf 1.67.0.1 [3228 B] Get:257 http://ftpmaster.internal/ubuntu disco/main armhf libboost-serialization1.67.0 armhf 1.67.0-11 [276 kB] Get:258 http://ftpmaster.internal/ubuntu disco/main armhf libboost-serialization1.67-dev armhf 1.67.0-11 [343 kB] Get:259 http://ftpmaster.internal/ubuntu disco/main armhf libevent-2.1-6 armhf 2.1.8-stable-4build1 [115 kB] Get:260 http://ftpmaster.internal/ubuntu disco/main armhf libevent-core-2.1-6 armhf 2.1.8-stable-4build1 [75.0 kB] Get:261 http://ftpmaster.internal/ubuntu disco/main armhf libevent-pthreads-2.1-6 armhf 2.1.8-stable-4build1 [4904 B] Get:262 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libltdl7 armhf 2.4.6-8 [35.6 kB] Get:263 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libhwloc5 armhf 1.11.12-1 [83.5 kB] Get:264 http://ftpmaster.internal/ubuntu disco/main armhf libpciaccess0 armhf 0.14-1 [15.5 kB] Get:265 http://ftpmaster.internal/ubuntu disco/main armhf ocl-icd-libopencl1 armhf 2.2.11-1ubuntu1 [28.7 kB] Get:266 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libhwloc-plugins armhf 1.11.12-1 [11.2 kB] Get:267 http://ftpmaster.internal/ubuntu disco/universe armhf libpmix2 armhf 3.1.1-1 [447 kB] Get:268 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libopenmpi3 armhf 3.1.3-10 [2234 kB] Get:269 http://ftpmaster.internal/ubuntu disco/universe armhf libboost-mpi1.67.0 armhf 1.67.0-11 [226 kB] Get:270 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf openmpi-common all 3.1.3-10 [147 kB] Get:271 http://ftpmaster.internal/ubuntu disco/main armhf libnl-3-dev armhf 3.4.0-1 [87.1 kB] Get:272 http://ftpmaster.internal/ubuntu disco/main armhf libnl-route-3-dev armhf 3.4.0-1 [150 kB] Get:273 http://ftpmaster.internal/ubuntu disco/main armhf libibverbs-dev armhf 21.0-1 [147 kB] Get:274 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libltdl-dev armhf 2.4.6-8 [160 kB] Get:275 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libhwloc-dev armhf 1.11.12-1 [149 kB] Get:276 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf openmpi-bin armhf 3.1.3-10 [85.6 kB] Get:277 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libopenmpi-dev armhf 3.1.3-10 [851 kB] Get:278 http://ftpmaster.internal/ubuntu disco/universe armhf mpi-default-dev armhf 1.13 [3748 B] Get:279 http://ftpmaster.internal/ubuntu disco/universe armhf libboost-mpi1.67-dev armhf 1.67.0-11 [253 kB] Get:280 http://ftpmaster.internal/ubuntu disco/universe armhf libboost-mpi-dev armhf 1.67.0.1 [3108 B] Get:281 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libcharls2 armhf 2.0.0+dfsg-1 [55.0 kB] Get:282 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libcharls-dev armhf 2.0.0+dfsg-1 [6552 B] Get:283 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libcurl3-gnutls armhf 7.63.0-1 [188 kB] Get:284 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libcurl4-gnutls-dev armhf 7.63.0-1 [279 kB] Get:285 http://ftpmaster.internal/ubuntu disco/universe armhf libdap25 armhf 3.20.2-1 [372 kB] Get:286 http://ftpmaster.internal/ubuntu disco/universe armhf libdapserver7v5 armhf 3.20.2-1 [18.8 kB] Get:287 http://ftpmaster.internal/ubuntu disco/universe armhf libdapclient6v5 armhf 3.20.2-1 [79.4 kB] Get:288 http://ftpmaster.internal/ubuntu disco/main armhf libicu-dev armhf 63.1-5 [8928 kB] Get:289 http://ftpmaster.internal/ubuntu disco/main armhf libxml2-dev armhf 2.9.4+dfsg1-7ubuntu3 [654 kB] Get:290 http://ftpmaster.internal/ubuntu disco-proposed/main armhf uuid-dev armhf 2.33.1-0.1ubuntu1 [32.7 kB] Get:291 http://ftpmaster.internal/ubuntu disco/main armhf pkg-config armhf 0.29.1-0ubuntu2 [42.0 kB] Get:292 http://ftpmaster.internal/ubuntu disco/universe armhf libdap-dev armhf 3.20.2-1 [708 kB] Get:293 http://ftpmaster.internal/ubuntu disco/main armhf libdrm-amdgpu1 armhf 2.4.95-1 [15.8 kB] Get:294 http://ftpmaster.internal/ubuntu disco/main armhf libdrm-radeon1 armhf 2.4.95-1 [19.0 kB] Get:295 http://ftpmaster.internal/ubuntu disco/main armhf libdrm-nouveau2 armhf 2.4.95-1 [14.5 kB] Get:296 http://ftpmaster.internal/ubuntu disco/main armhf libdrm-omap1 armhf 2.4.95-1 [6320 B] Get:297 http://ftpmaster.internal/ubuntu disco/main armhf libdrm-freedreno1 armhf 2.4.95-1 [16.7 kB] Get:298 http://ftpmaster.internal/ubuntu disco/main armhf libdrm-exynos1 armhf 2.4.95-1 [9320 B] Get:299 http://ftpmaster.internal/ubuntu disco/main armhf libdrm-tegra0 armhf 2.4.95-1 [5688 B] Get:300 http://ftpmaster.internal/ubuntu disco/main armhf libdrm-etnaviv1 armhf 2.4.95-1 [10.0 kB] Get:301 http://ftpmaster.internal/ubuntu disco/main armhf libdrm-dev armhf 2.4.95-1 [129 kB] Get:302 http://ftpmaster.internal/ubuntu disco/universe armhf libepsilon1 armhf 0.9.2+dfsg-4 [36.0 kB] Get:303 http://ftpmaster.internal/ubuntu disco/main armhf libexpat1-dev armhf 2.2.6-1 [107 kB] Get:304 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libpng-dev armhf 1.6.36-3 [167 kB] Get:305 http://ftpmaster.internal/ubuntu disco/main armhf libfreetype6-dev armhf 2.9.1-3 [445 kB] Get:306 http://ftpmaster.internal/ubuntu disco/main armhf libfontconfig1-dev armhf 2.13.0-5ubuntu3 [693 kB] Get:307 http://ftpmaster.internal/ubuntu disco/universe armhf libfyba0 armhf 4.1.1-6 [99.1 kB] Get:308 http://ftpmaster.internal/ubuntu disco/universe armhf libfyba-dev armhf 4.1.1-6 [159 kB] Get:309 http://ftpmaster.internal/ubuntu disco/universe armhf libfreexl1 armhf 1.0.5-3 [31.2 kB] Get:310 http://ftpmaster.internal/ubuntu disco/universe armhf libgeos-3.7.1 armhf 3.7.1-1 [400 kB] Get:311 http://ftpmaster.internal/ubuntu disco/universe armhf libgeos-c1v5 armhf 3.7.1-1 [49.4 kB] Get:312 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf proj-data all 5.2.0-1 [6952 kB] Get:313 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libproj13 armhf 5.2.0-1 [158 kB] Get:314 http://ftpmaster.internal/ubuntu disco/universe armhf libgeotiff2 armhf 1.4.3-1 [46.7 kB] Get:315 http://ftpmaster.internal/ubuntu disco/main armhf libgif7 armhf 5.1.4-3 [28.3 kB] Get:316 http://ftpmaster.internal/ubuntu disco/universe armhf libhdf4-0-alt armhf 4.2.13-4 [230 kB] Get:317 http://ftpmaster.internal/ubuntu disco/universe armhf libminizip1 armhf 1.1-8build1 [18.5 kB] Get:318 http://ftpmaster.internal/ubuntu disco/universe armhf liburiparser1 armhf 0.9.1-1 [32.2 kB] Get:319 http://ftpmaster.internal/ubuntu disco/universe armhf libkmlbase1 armhf 1.3.0-7 [38.3 kB] Get:320 http://ftpmaster.internal/ubuntu disco/universe armhf libkmldom1 armhf 1.3.0-7 [147 kB] Get:321 http://ftpmaster.internal/ubuntu disco/universe armhf libkmlengine1 armhf 1.3.0-7 [61.7 kB] Get:322 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libnetcdf13 armhf 1:4.6.2-1build1 [311 kB] Get:323 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libodbc1 armhf 2.3.6-0.1build1 [156 kB] Get:324 http://ftpmaster.internal/ubuntu disco/universe armhf libogdi3.2 armhf 3.2.1+ds-4 [184 kB] Get:325 http://ftpmaster.internal/ubuntu disco/main armhf liblcms2-2 armhf 2.9-3 [113 kB] Get:326 http://ftpmaster.internal/ubuntu disco/main armhf libnspr4 armhf 2:4.20-1ubuntu1 [84.6 kB] Get:327 http://ftpmaster.internal/ubuntu disco/main armhf libnss3 armhf 2:3.39-1ubuntu1 [953 kB] Get:328 http://ftpmaster.internal/ubuntu disco/main armhf libpoppler82 armhf 0.71.0-2ubuntu1 [759 kB] Get:329 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libpq5 armhf 11.1-2 [89.3 kB] Get:330 http://ftpmaster.internal/ubuntu disco/universe armhf libqhull7 armhf 2015.2-4 [134 kB] Get:331 http://ftpmaster.internal/ubuntu disco/universe armhf libspatialite7 armhf 4.3.0a-5build2 [1298 kB] Get:332 http://ftpmaster.internal/ubuntu disco/universe armhf libxerces-c3.2 armhf 3.2.2+debian-1build1 [720 kB] Get:333 http://ftpmaster.internal/ubuntu disco-proposed/main armhf odbcinst armhf 2.3.6-0.1build1 [14.1 kB] Get:334 http://ftpmaster.internal/ubuntu disco-proposed/main armhf odbcinst1debian2 armhf 2.3.6-0.1build1 [33.6 kB] Get:335 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libgdal20 armhf 2.4.0+dfsg-1build1 [4993 kB] Get:336 http://ftpmaster.internal/ubuntu disco/universe armhf libgeos-dev armhf 3.7.1-1 [73.9 kB] Get:337 http://ftpmaster.internal/ubuntu disco/main armhf libgif-dev armhf 5.1.4-3 [18.1 kB] Get:338 http://ftpmaster.internal/ubuntu disco/main armhf libllvm7 armhf 1:7.0.1-4 [11.2 MB] Get:339 http://ftpmaster.internal/ubuntu disco/main armhf libsensors-config all 1:3.5.0-3ubuntu1 [6168 B] Get:340 http://ftpmaster.internal/ubuntu disco/main armhf libsensors5 armhf 1:3.5.0-3ubuntu1 [24.2 kB] Get:341 http://ftpmaster.internal/ubuntu disco/main armhf libgl1-mesa-dri armhf 18.3.2-1ubuntu1 [4549 kB] Get:342 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-glx0 armhf 1.13.1-2 [20.2 kB] Get:343 http://ftpmaster.internal/ubuntu disco/main armhf libxdamage1 armhf 1:1.1.4-3 [6488 B] Get:344 http://ftpmaster.internal/ubuntu disco/main armhf libglx-mesa0 armhf 18.3.2-1ubuntu1 [124 kB] Get:345 http://ftpmaster.internal/ubuntu disco/main armhf libglx0 armhf 1.1.0-1 [23.7 kB] Get:346 http://ftpmaster.internal/ubuntu disco/main armhf libgl1 armhf 1.1.0-1 [98.1 kB] Get:347 http://ftpmaster.internal/ubuntu disco/universe armhf libgl2ps1.4 armhf 1.4.0+dfsg1-2 [33.6 kB] Get:348 http://ftpmaster.internal/ubuntu disco/universe armhf libgl2ps-dev armhf 1.4.0+dfsg1-2 [12.9 kB] Get:349 http://ftpmaster.internal/ubuntu disco/main armhf libgles1 armhf 1.1.0-1 [11.5 kB] Get:350 http://ftpmaster.internal/ubuntu disco/main armhf libglu1-mesa armhf 9.0.0-2.1build1 [134 kB] Get:351 http://ftpmaster.internal/ubuntu disco/main armhf xorg-sgml-doctools all 1:1.11-1 [12.9 kB] Get:352 http://ftpmaster.internal/ubuntu disco/main armhf x11proto-dev all 2018.4-4 [251 kB] Get:353 http://ftpmaster.internal/ubuntu disco/main armhf x11proto-core-dev all 2018.4-4 [2620 B] Get:354 http://ftpmaster.internal/ubuntu disco/main armhf libxau-dev armhf 1:1.0.8-1 [9438 B] Get:355 http://ftpmaster.internal/ubuntu disco/main armhf libxdmcp-dev armhf 1:1.1.2-3 [23.6 kB] Get:356 http://ftpmaster.internal/ubuntu disco/main armhf xtrans-dev all 1.3.5-1 [70.5 kB] Get:357 http://ftpmaster.internal/ubuntu disco/main armhf libpthread-stubs0-dev armhf 0.3-4 [4084 B] Get:358 http://ftpmaster.internal/ubuntu disco/main armhf libxcb1-dev armhf 1.13.1-2 [77.2 kB] Get:359 http://ftpmaster.internal/ubuntu disco/main armhf libx11-dev armhf 2:1.6.7-1 [588 kB] Get:360 http://ftpmaster.internal/ubuntu disco/main armhf mesa-common-dev armhf 18.3.2-1ubuntu1 [566 kB] Get:361 http://ftpmaster.internal/ubuntu disco/main armhf libglvnd-core-dev armhf 1.1.0-1 [12.6 kB] Get:362 http://ftpmaster.internal/ubuntu disco/main armhf libopengl0 armhf 1.1.0-1 [33.9 kB] Get:363 http://ftpmaster.internal/ubuntu disco/main armhf libglvnd-dev armhf 1.1.0-1 [3396 B] Get:364 http://ftpmaster.internal/ubuntu disco/main armhf libx11-xcb-dev armhf 2:1.6.7-1 [9748 B] Get:365 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-dri3-dev armhf 1.13.1-2 [7384 B] Get:366 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-render0-dev armhf 1.13.1-2 [18.2 kB] Get:367 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-randr0-dev armhf 1.13.1-2 [20.3 kB] Get:368 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-shape0-dev armhf 1.13.1-2 [7084 B] Get:369 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-xfixes0-dev armhf 1.13.1-2 [11.9 kB] Get:370 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-sync-dev armhf 1.13.1-2 [10.5 kB] Get:371 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-present-dev armhf 1.13.1-2 [7064 B] Get:372 http://ftpmaster.internal/ubuntu disco/main armhf libxshmfence-dev armhf 1.3-1 [3552 B] Get:373 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-dri2-0-dev armhf 1.13.1-2 [8476 B] Get:374 http://ftpmaster.internal/ubuntu disco/main armhf libxcb-glx0-dev armhf 1.13.1-2 [27.0 kB] Get:375 http://ftpmaster.internal/ubuntu disco/main armhf x11proto-fixes-dev all 1:2018.4-4 [2620 B] Get:376 http://ftpmaster.internal/ubuntu disco/main armhf libxfixes-dev armhf 1:5.0.3-1 [9856 B] Get:377 http://ftpmaster.internal/ubuntu disco/main armhf x11proto-damage-dev all 1:2018.4-4 [2620 B] Get:378 http://ftpmaster.internal/ubuntu disco/main armhf libxdamage-dev armhf 1:1.1.4-3 [4692 B] Get:379 http://ftpmaster.internal/ubuntu disco/main armhf x11proto-xext-dev all 2018.4-4 [2620 B] Get:380 http://ftpmaster.internal/ubuntu disco/main armhf libxext-dev armhf 2:1.3.3-1 [77.8 kB] Get:381 http://ftpmaster.internal/ubuntu disco/main armhf x11proto-xf86vidmode-dev all 2018.4-4 [2632 B] Get:382 http://ftpmaster.internal/ubuntu disco/main armhf libxxf86vm-dev armhf 1:1.1.4-1 [12.7 kB] Get:383 http://ftpmaster.internal/ubuntu disco/main armhf libgl1-mesa-dev armhf 18.3.2-1ubuntu1 [6040 B] Get:384 http://ftpmaster.internal/ubuntu disco/main armhf libglu1-mesa-dev armhf 9.0.0-2.1build1 [170 kB] Get:385 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libhdf5-openmpi-103 armhf 1.10.4+repack-9 [1312 kB] Get:386 http://ftpmaster.internal/ubuntu disco/main armhf libice-dev armhf 2:1.0.9-2 [40.4 kB] Get:387 http://ftpmaster.internal/ubuntu disco/universe armhf libimagequant0 armhf 2.12.2-1 [26.1 kB] Get:388 http://ftpmaster.internal/ubuntu disco/main armhf libjs-jquery all 3.2.1-1 [152 kB] Get:389 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libjs-underscore all 1.8.3~dfsg-2 [90.6 kB] Get:390 http://ftpmaster.internal/ubuntu disco/main armhf libjs-sphinxdoc all 1.7.9-1 [92.3 kB] Get:391 http://ftpmaster.internal/ubuntu disco/universe armhf libkmlconvenience1 armhf 1.3.0-7 [38.8 kB] Get:392 http://ftpmaster.internal/ubuntu disco/universe armhf libkmlregionator1 armhf 1.3.0-7 [16.8 kB] Get:393 http://ftpmaster.internal/ubuntu disco/universe armhf libkmlxsd1 armhf 1.3.0-7 [24.8 kB] Get:394 http://ftpmaster.internal/ubuntu disco/universe armhf libminizip-dev armhf 1.1-8build1 [25.7 kB] Get:395 http://ftpmaster.internal/ubuntu disco/universe armhf libnetcdf-c++4 armhf 4.2-11 [27.4 kB] Get:396 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libnetcdf-dev armhf 1:4.6.2-1build1 [38.8 kB] Get:397 http://ftpmaster.internal/ubuntu disco/universe armhf libnetcdf-cxx-legacy-dev armhf 4.2-11 [50.0 kB] Get:398 http://ftpmaster.internal/ubuntu disco/main armhf libogg-dev armhf 1.3.2-1 [155 kB] Get:399 http://ftpmaster.internal/ubuntu disco/main armhf libpcre16-3 armhf 2:8.39-11 [128 kB] Get:400 http://ftpmaster.internal/ubuntu disco/main armhf libpcre32-3 armhf 2:8.39-11 [120 kB] Get:401 http://ftpmaster.internal/ubuntu disco/main armhf libpcrecpp0v5 armhf 2:8.39-11 [13.2 kB] Get:402 http://ftpmaster.internal/ubuntu disco/main armhf libpcre3-dev armhf 2:8.39-11 [474 kB] Get:403 http://ftpmaster.internal/ubuntu disco/main armhf libpoppler-dev armhf 0.71.0-2ubuntu1 [5108 B] Get:404 http://ftpmaster.internal/ubuntu disco/main armhf libpoppler-private-dev armhf 0.71.0-2ubuntu1 [171 kB] Get:405 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libpq-dev armhf 11.1-2 [145 kB] Get:406 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libpython2.7 armhf 2.7.15-5build1 [891 kB] Get:407 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libpython2.7-dev armhf 2.7.15-5build1 [30.9 MB] Get:408 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libpython2-dev armhf 2.7.15-4 [7648 B] Get:409 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libpython-dev armhf 2.7.15-4 [5884 B] Get:410 http://ftpmaster.internal/ubuntu disco/universe armhf libqhull-r7 armhf 2015.2-4 [132 kB] Get:411 http://ftpmaster.internal/ubuntu disco/universe armhf libqhull-dev armhf 2015.2-4 [332 kB] Get:412 http://ftpmaster.internal/ubuntu disco/universe armhf libqt5opengl5 armhf 5.11.3+dfsg-2ubuntu1 [110 kB] Get:413 http://ftpmaster.internal/ubuntu disco/main armhf libsm-dev armhf 2:1.2.2-1 [14.8 kB] Get:414 http://ftpmaster.internal/ubuntu disco/main armhf libsodium23 armhf 1.0.16-2build1 [125 kB] Get:415 http://ftpmaster.internal/ubuntu disco-proposed/main armhf libsqlite3-dev armhf 3.26.0+fossilbc891ac6b-1build1 [607 kB] Get:416 http://ftpmaster.internal/ubuntu disco/universe armhf libswscale5 armhf 7:4.1-1 [129 kB] Get:417 http://ftpmaster.internal/ubuntu disco/universe armhf libswscale-dev armhf 7:4.1-1 [144 kB] Get:418 http://ftpmaster.internal/ubuntu disco/main armhf libtcl8.6 armhf 8.6.9+dfsg-1 [790 kB] Get:419 http://ftpmaster.internal/ubuntu disco/main armhf libtheora-dev armhf 1.1.1+dfsg.1-14 [162 kB] Get:420 http://ftpmaster.internal/ubuntu disco/main armhf libjbig-dev armhf 2.1-3.1build1 [22.9 kB] Get:421 http://ftpmaster.internal/ubuntu disco/main armhf liblzma-dev armhf 5.2.2-1.3 [138 kB] Get:422 http://ftpmaster.internal/ubuntu disco/main armhf libtiffxx5 armhf 4.0.10-3 [5732 B] Get:423 http://ftpmaster.internal/ubuntu disco/main armhf libtiff-dev armhf 4.0.10-3 [261 kB] Get:424 http://ftpmaster.internal/ubuntu disco/main armhf libxft2 armhf 2.3.2-2 [31.6 kB] Get:425 http://ftpmaster.internal/ubuntu disco/main armhf libxss1 armhf 1:1.2.3-1 [7512 B] Get:426 http://ftpmaster.internal/ubuntu disco/main armhf libtk8.6 armhf 8.6.9-1 [619 kB] Get:427 http://ftpmaster.internal/ubuntu disco/universe armhf liburiparser-dev armhf 0.9.1-1 [11.9 kB] Get:428 http://ftpmaster.internal/ubuntu disco/universe armhf libeigen3-dev all 3.3.7-1 [814 kB] Get:429 http://ftpmaster.internal/ubuntu disco/universe armhf libepsilon-dev armhf 0.9.2+dfsg-4 [44.9 kB] Get:430 http://ftpmaster.internal/ubuntu disco/universe armhf libfreexl-dev armhf 1.0.5-3 [29.2 kB] Get:431 http://ftpmaster.internal/ubuntu disco/universe armhf libgeotiff-dev armhf 1.4.3-1 [73.2 kB] Get:432 http://ftpmaster.internal/ubuntu disco/universe armhf libhdf4-alt-dev armhf 4.2.13-4 [333 kB] Get:433 http://ftpmaster.internal/ubuntu disco/main armhf libjson-c-dev armhf 0.12.1+ds-2 [29.0 kB] Get:434 http://ftpmaster.internal/ubuntu disco/universe armhf libkml-dev armhf 1.3.0-7 [933 kB] Get:435 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libproj-dev armhf 5.2.0-1 [198 kB] Get:436 http://ftpmaster.internal/ubuntu disco/universe armhf libogdi3.2-dev armhf 3.2.1+ds-4 [23.7 kB] Get:437 http://ftpmaster.internal/ubuntu disco/universe armhf libopenjp2-7-dev armhf 2.3.0-1.1 [26.6 kB] Get:438 http://ftpmaster.internal/ubuntu disco/universe armhf libspatialite-dev armhf 4.3.0a-5build2 [1524 kB] Get:439 http://ftpmaster.internal/ubuntu disco/main armhf libwebpdemux2 armhf 0.6.1-2 [8760 B] Get:440 http://ftpmaster.internal/ubuntu disco/main armhf libwebp-dev armhf 0.6.1-2 [228 kB] Get:441 http://ftpmaster.internal/ubuntu disco/universe armhf libxerces-c-dev armhf 3.2.2+debian-1build1 [1525 kB] Get:442 http://ftpmaster.internal/ubuntu disco/main armhf libzstd-dev armhf 1.3.8+dfsg-3 [243 kB] Get:443 http://ftpmaster.internal/ubuntu disco-proposed/main armhf unixodbc-dev armhf 2.3.6-0.1build1 [202 kB] Get:444 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libgdal-dev armhf 2.4.0+dfsg-1build1 [7054 kB] Get:445 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libhdf5-openmpi-dev armhf 1.10.4+repack-9 [2460 kB] Get:446 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libhdf5-mpi-dev armhf 1.10.4+repack-9 [4740 B] Get:447 http://ftpmaster.internal/ubuntu disco/main armhf libjsoncpp-dev armhf 1.7.4-3 [77.5 kB] Get:448 http://ftpmaster.internal/ubuntu disco/main armhf libxt6 armhf 1:1.1.5-1 [129 kB] Get:449 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libvtk6.3 armhf 6.3.0+dfsg2-2build6 [28.4 MB] Get:450 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libvtk6.3-qt armhf 6.3.0+dfsg2-2build6 [217 kB] Get:451 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libvtk6-jni armhf 6.3.0+dfsg2-2build6 [3887 kB] Get:452 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libvtk6-java armhf 6.3.0+dfsg2-2build6 [3300 kB] Get:453 http://ftpmaster.internal/ubuntu disco/main armhf libxrender-dev armhf 1:0.9.10-1 [21.7 kB] Get:454 http://ftpmaster.internal/ubuntu disco/main armhf libxft-dev armhf 2.3.2-2 [42.3 kB] Get:455 http://ftpmaster.internal/ubuntu disco/main armhf x11proto-scrnsaver-dev all 2018.4-4 [2628 B] Get:456 http://ftpmaster.internal/ubuntu disco/main armhf libxss-dev armhf 1:1.2.3-1 [11.5 kB] Get:457 http://ftpmaster.internal/ubuntu disco/main armhf libxt-dev armhf 1:1.1.5-1 [366 kB] Get:458 http://ftpmaster.internal/ubuntu disco/universe armhf python-cbor armhf 1.0.0-1build2 [19.6 kB] Get:459 http://ftpmaster.internal/ubuntu disco/main armhf python-concurrent.futures all 3.2.0-2 [34.6 kB] Get:460 http://ftpmaster.internal/ubuntu disco/main armhf python-configparser all 3.5.0b2-1 [59.3 kB] Get:461 http://ftpmaster.internal/ubuntu disco/universe armhf python-future all 0.15.2-5 [335 kB] Get:462 http://ftpmaster.internal/ubuntu disco/universe armhf python-lz4 armhf 1.1.0+dfsg-1build1 [23.5 kB] Get:463 http://ftpmaster.internal/ubuntu disco/main armhf python-cffi-backend armhf 1.11.5-3ubuntu2 [55.8 kB] Get:464 http://ftpmaster.internal/ubuntu disco-proposed/main armhf python-six all 1.12.0-1 [11.6 kB] Get:465 http://ftpmaster.internal/ubuntu disco/universe armhf python-nacl armhf 1.3.0-2 [42.8 kB] Get:466 http://ftpmaster.internal/ubuntu disco/main armhf python-asn1crypto all 0.24.0-1 [72.7 kB] Get:467 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17.3.1-2 [27.5 kB] Get:487 http://ftpmaster.internal/ubuntu disco/main armhf python-incremental all 16.10.1-3 [14.4 kB] Get:488 http://ftpmaster.internal/ubuntu disco/main armhf python-twisted-core all 18.9.0-3 [1989 kB] Get:489 http://ftpmaster.internal/ubuntu disco/universe armhf python-twisted all 18.9.0-3 [3716 B] Get:490 http://ftpmaster.internal/ubuntu disco/universe armhf python-txaio all 2.10.0-1 [18.7 kB] Get:491 http://ftpmaster.internal/ubuntu disco/universe armhf python-u-msgpack all 2.1-1 [7268 B] Get:492 http://ftpmaster.internal/ubuntu disco/universe armhf python-ubjson armhf 0.12.0-1build1 [29.5 kB] Get:493 http://ftpmaster.internal/ubuntu disco/universe armhf python-wsaccel armhf 0.6.2-1build2 [35.2 kB] Get:494 http://ftpmaster.internal/ubuntu disco/universe armhf python-autobahn all 17.10.1+dfsg1-3 [157 kB] Get:495 http://ftpmaster.internal/ubuntu disco/universe armhf mpi-default-bin armhf 1.13 [2968 B] Get:496 http://ftpmaster.internal/ubuntu disco/universe armhf python-mpi4py armhf 2.0.0-3build3 [367 kB] Get:497 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf python-vtk6 armhf 6.3.0+dfsg2-2build6 [246 kB] Get:498 http://ftpmaster.internal/ubuntu disco/main armhf tcl8.6 armhf 8.6.9+dfsg-1 [14.2 kB] Get:499 http://ftpmaster.internal/ubuntu disco/main armhf tcl8.6-dev armhf 8.6.9+dfsg-1 [807 kB] Get:500 http://ftpmaster.internal/ubuntu disco/universe armhf tcl armhf 8.6.0+9 [5142 B] Get:501 http://ftpmaster.internal/ubuntu disco/universe armhf tcl-dev armhf 8.6.0+9 [5680 B] Get:502 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf tcl-vtk6 armhf 6.3.0+dfsg2-2build6 [129 kB] Get:503 http://ftpmaster.internal/ubuntu disco/universe armhf tk8.6 armhf 8.6.9-1 [12.1 kB] Get:504 http://ftpmaster.internal/ubuntu disco/universe armhf tk8.6-dev armhf 8.6.9-1 [634 kB] Get:505 http://ftpmaster.internal/ubuntu disco/universe armhf tk armhf 8.6.0+9 [3178 B] Get:506 http://ftpmaster.internal/ubuntu disco/universe armhf tk-dev armhf 8.6.0+9 [2976 B] Get:507 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf vtk6 armhf 6.3.0+dfsg2-2build6 [154 kB] Get:508 http://ftpmaster.internal/ubuntu disco-proposed/universe armhf libvtk6-dev armhf 6.3.0+dfsg2-2build6 [2143 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 251 MB in 14s (17.6 MB/s) Selecting previously unselected package libxau6:armhf. (Reading database ... 12437 files and directories currently installed.) Preparing to unpack .../000-libxau6_1%3a1.0.8-1_armhf.deb ... Unpacking libxau6:armhf (1:1.0.8-1) ... Selecting previously unselected package libbsd0:armhf. Preparing to unpack .../001-libbsd0_0.9.1-1_armhf.deb ... Unpacking libbsd0:armhf (0.9.1-1) ... Selecting previously unselected package libxdmcp6:armhf. Preparing to unpack .../002-libxdmcp6_1%3a1.1.2-3_armhf.deb ... Unpacking libxdmcp6:armhf (1:1.1.2-3) ... Selecting previously unselected package libxcb1:armhf. Preparing to unpack .../003-libxcb1_1.13.1-2_armhf.deb ... Unpacking libxcb1:armhf (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../004-libx11-data_2%3a1.6.7-1_all.deb ... Unpacking libx11-data (2:1.6.7-1) ... Selecting previously unselected package libx11-6:armhf. Preparing to unpack .../005-libx11-6_2%3a1.6.7-1_armhf.deb ... Unpacking libx11-6:armhf (2:1.6.7-1) ... 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Setting up libnghttp2-14:armhf (1.35.1-1) ... Setting up libjs-underscore (1.8.3~dfsg-2) ... Setting up libdouble-conversion1:armhf (3.1.0-2) ... Setting up libcharls2:armhf (2.0.0+dfsg-1) ... Setting up mime-support (3.60ubuntu1) ... Setting up libwoff1:armhf (1.0.2-1build1) ... Setting up libicu63:armhf (63.1-5) ... Setting up libevdev2:armhf (1.6.0+dfsg-1) ... Setting up iso-codes (4.1-1) ... Setting up libsqlite3-dev:armhf (3.26.0+fossilbc891ac6b-1build1) ... Setting up libwavpack1:armhf (5.1.0-5) ... Setting up liblcms2-2:armhf (2.9-3) ... Setting up libjbig0:armhf (2.1-3.1build1) ... Setting up libsigsegv2:armhf (2.12-2) ... Setting up libldap-common (2.4.47+dfsg-2ubuntu1) ... Setting up libpthread-stubs0-dev:armhf (0.3-4) ... Setting up libimagequant0:armhf (2.12.2-1) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libuv1:armhf (1.24.1-1) ... Setting up libcap2-bin (1:2.25-1.2) ... Setting up libpsl5:armhf (0.20.2-2) ... Setting up libelf1:armhf (0.175-2) ... Setting up libsoxr0:armhf (0.1.2-3) ... Setting up libglib2.0-0:armhf (2.58.1-2) ... No schema files found: doing nothing. Setting up mysql-common (5.8+1.0.5) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libxshmfence1:armhf (1.3-1) ... Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up libwayland-client0:armhf (1.16.0-1ubuntu2) ... Setting up xkb-data (2.23.1-1ubuntu1.18.10.1) ... Setting up libsasl2-modules-db:armhf (2.1.27+dfsg-1) ... Setting up libsasl2-2:armhf (2.1.27+dfsg-1) ... Setting up uuid-dev:armhf (2.33.1-0.1ubuntu1) ... Setting up libjs-sphinxdoc (1.7.9-1) ... Setting up libgdk-pixbuf2.0-common (2.38.0+dfsg-7) ... Setting up libopenjp2-7-dev (2.3.0-1.1) ... Setting up libdatrie1:armhf (0.2.12-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libshine3:armhf (3.1.1-2) ... Setting up cmake-data (3.13.2-1) ... Setting up libgif7:armhf (5.1.4-3) ... Setting up libva2:armhf (2.3.0-2) ... Setting up libjpeg-turbo8:armhf (2.0.1-0ubuntu1) ... Setting up libpipeline1:armhf (1.5.0-2) ... Setting up libroken18-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libglapi-mesa:armhf (18.3.2-1ubuntu1) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2) ... Setting up libepsilon1:armhf (0.9.2+dfsg-4) ... Setting up libspeex1:armhf (1.2~rc1.2-1ubuntu2) ... Setting up m4 (1.4.18-2) ... Setting up libminizip-dev:armhf (1.1-8build1) ... Setting up libxvidcore4:armhf (2:1.3.5-1) ... Setting up libbsd0:armhf (0.9.1-1) ... Setting up libkrb5support0:armhf (1.17-1) ... Setting up libsensors5:armhf (1:3.5.0-3ubuntu1) ... Setting up libnspr4:armhf (2:4.20-1ubuntu1) ... Setting up ucf (3.0038+nmu1) ... Setting up libxml2:armhf (2.9.4+dfsg1-7ubuntu3) ... Setting up libuchardet0:armhf (0.0.6-3) ... Setting up libfreexl1:armhf (1.0.5-3) ... Setting up x11proto-dev (2018.4-4) ... Setting up libopus0:armhf (1.3-1) ... Setting up libfreetype6:armhf (2.9.1-3) ... 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Setting up libblas3:armhf (3.8.0-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up x11proto-xext-dev (2018.4-4) ... Setting up libjpeg-turbo8-dev:armhf (2.0.1-0ubuntu1) ... Setting up libevent-pthreads-2.1-6:armhf (2.1.8-stable-4build1) ... Setting up openmpi-common (3.1.3-10) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up libcodec2-0.8.1:armhf (0.8.1-2) ... Setting up dwz (0.12-3) ... Setting up autotools-dev (20180224.1) ... Setting up libboost1.67-dev:armhf (1.67.0-11) ... Setting up libheimbase1-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libsnappy1v5:armhf (1.1.7-1) ... Setting up libcharls-dev:armhf (2.0.0+dfsg-1) ... Setting up libzstd-dev:armhf (1.3.8+dfsg-3) ... Processing triggers for systemd (240-4ubuntu1) ... Setting up libltdl7:armhf (2.4.6-8) ... Setting up libmtdev1:armhf (1.1.5-1ubuntu3) ... Setting up libjson-c-dev:armhf (0.12.1+ds-2) ... Setting up libzvbi-common (0.2.35-16) ... Setting up libfribidi0:armhf (1.0.5-3.1) ... Setting up libexpat1-dev:armhf (2.2.6-1) ... Setting up libpciaccess0:armhf (0.14-1) ... Setting up libgles2:armhf (1.1.0-1) ... Setting up shared-mime-info (1.10-1) ... Setting up libxkbcommon0:armhf (0.8.2-1) ... Setting up x11proto-scrnsaver-dev (2018.4-4) ... Setting up libpcrecpp0v5:armhf (2:8.39-11) ... Setting up libpcre32-3:armhf (2:8.39-11) ... Setting up libgudev-1.0-0:armhf (1:232-2) ... Setting up libvpx5:armhf (1.7.0-3) ... Setting up libboost-serialization1.67.0:armhf (1.67.0-11) ... Setting up libmysqlclient20:armhf (5.7.24-3) ... Setting up icu-devtools (63.1-5) ... Setting up liborc-0.4-0:armhf (1:0.4.28-3.1) ... Setting up libpcre16-3:armhf (2:8.39-11) ... Setting up libaom0:armhf (1.0.0-3) ... Setting up libboost-dev:armhf (1.67.0.1) ... Setting up libgme0:armhf (0.6.2-1) ... Setting up libtcl8.6:armhf (8.6.9+dfsg-1) ... Setting up libthai-data (0.1.28-1) ... Setting up liblzma-dev:armhf (5.2.2-1.3) ... Setting up libxdmcp6:armhf (1:1.1.2-3) ... Setting up ocl-icd-libopencl1:armhf (2.2.11-1ubuntu1) ... Setting up libzvbi0:armhf (0.2.35-16) ... Setting up libkeyutils1:armhf (1.5.9-9.3) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libnl-3-200:armhf (3.4.0-1) ... Setting up libvorbis0a:armhf (1.3.6-1) ... Setting up x11-common (1:7.7+19ubuntu8) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libmpg123-0:armhf (1.25.10-2) ... Setting up libfyba-dev:armhf (4.1.1-6) ... Setting up libogg-dev:armhf (1.3.2-1) ... Setting up libgfortran5:armhf (8.2.0-14ubuntu1) ... 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Setting up libblas-dev:armhf (3.8.0-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode Setting up libopenmpt0:armhf (0.4.1-1) ... Setting up libarchive13:armhf (3.3.3-3) ... Setting up libllvm7:armhf (1:7.0.1-4) ... Setting up libeigen3-dev (3.3.7-1) ... Setting up libgif-dev (5.1.4-3) ... Setting up libepsilon-dev:armhf (0.9.2+dfsg-4) ... Setting up libasn1-8-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up groff-base (1.22.4-2) ... Setting up liblapack3:armhf (3.8.0-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up x11proto-fixes-dev (1:2018.4-4) ... Setting up libnl-3-dev:armhf (3.4.0-1) ... Setting up libhcrypto4-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libaec-dev:armhf (1.0.2-1) ... Setting up python2.7 (2.7.15-5build1) ... Setting up libnss3:armhf (2:3.39-1ubuntu1) ... Setting up libproj13:armhf (5.2.0-1) ... Setting up libharfbuzz0b:armhf (2.3.0-1) ... Setting up libtiff5:armhf (4.0.10-3) ... Setting up x11proto-xf86vidmode-dev (2018.4-4) ... Setting up libxau-dev:armhf (1:1.0.8-1) ... Setting up libnl-route-3-200:armhf (3.4.0-1) ... Setting up autoconf (2.69-11) ... Setting up libthai0:armhf (0.1.28-1) ... Setting up libicu-dev (63.1-5) ... Setting up libhdf5-103:armhf (1.10.4+repack-9) ... Setting up file (1:5.35-2) ... Setting up libinput-bin (1.12.4-1) ... Setting up libsuperlu5:armhf (5.2.1+dfsg1-3build1) ... Setting up libhwloc5:armhf (1.11.12-1) ... Setting up libkmlbase1:armhf (1.3.0-7) ... Setting up libhx509-5-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libqhull-dev:armhf (2015.2-4) ... Setting up libdrm2:armhf (2.4.95-1) ... Setting up libxml2-dev:armhf (2.9.4+dfsg1-7ubuntu3) ... Setting up libogdi3.2 (3.2.1+ds-4) ... Setting up libhwloc-plugins:armhf (1.11.12-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libkmlxsd1:armhf (1.3.0-7) ... Setting up libgeos-c1v5:armhf (3.7.1-1) ... Setting up libxdmcp-dev:armhf (1:1.1.2-3) ... Setting up libjpeg8-dev:armhf (8c-2ubuntu8) ... Setting up libsuperlu-dev:armhf (5.2.1+dfsg1-3build1) ... Setting up libjpeg-dev:armhf (8c-2ubuntu8) ... Setting up libdapserver7v5:armhf (3.20.2-1) ... Setting up libqt5positioning5:armhf (5.11.3+dfsg-2) ... Setting up libwebpmux3:armhf (0.6.1-2) ... Setting up libva-drm2:armhf (2.3.0-2) ... Setting up tcl8.6 (8.6.9+dfsg-1) ... Setting up libdrm-etnaviv1:armhf (2.4.95-1) ... Setting up libpython2.7:armhf (2.7.15-5build1) ... Setting up libgeotiff2:armhf (1.4.3-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libice6:armhf (2:1.0.9-2) ... Setting up libtiffxx5:armhf (4.0.10-3) ... Setting up libwebpdemux2:armhf (0.6.1-2) ... Setting up libspatialite7:armhf (4.3.0a-5build2) ... Setting up libarpack2:armhf (3.7.0-1) ... Setting up man-db (2.8.5-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libpython2-stdlib:armhf (2.7.15-4) ... Setting up liburiparser-dev (0.9.1-1) ... Setting up libkrb5-3:armhf (1.17-1) ... Setting up libpython2.7-dev:armhf (2.7.15-5build1) ... Setting up libkmldom1:armhf (1.3.0-7) ... Setting up libavahi-common3:armhf (0.7-4ubuntu4) ... Setting up libdrm-radeon1:armhf (2.4.95-1) ... Setting up default-libmysqlclient-dev:armhf (1.0.5) ... Setting up libkrb5-26-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up libpng-dev:armhf (1.6.36-3) ... Setting up libhdf4-0-alt (4.2.13-4) ... Setting up libvorbisenc2:armhf (1.3.6-1) ... Setting up libdrm-nouveau2:armhf (2.4.95-1) ... Setting up libspatialite-dev:armhf (4.3.0a-5build2) ... Setting up libxcb1:armhf (1.13.1-2) ... Setting up libheimntlm0-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up tcl8.6-dev:armhf (8.6.9+dfsg-1) ... Setting up libxcb-xkb1:armhf (1.13.1-2) ... Setting up libqt5qml5:armhf (5.11.3-2build1) ... Setting up liblapack-dev:armhf (3.8.0-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode Setting up libtool (2.4.6-8) ... Setting up libxcb-xinerama0:armhf (1.13.1-2) ... Setting up libibverbs1:armhf (21.0-1) ... Setting up libxcb-present0:armhf (1.13.1-2) ... Setting up libgstreamer-plugins-base1.0-0:armhf (1.14.4-1ubuntu1) ... Setting up libtiff-dev:armhf (4.0.10-3) ... Setting up libfontconfig1:armhf (2.13.0-5ubuntu3) ... Setting up libxcb-dri2-0:armhf (1.13.1-2) ... Setting up libsm6:armhf (2:1.2.2-1) ... Setting up libqt5sensors5:armhf (5.11.3-2) ... Setting up libgeotiff-dev:armhf (1.4.3-1) ... Setting up libproj-dev:armhf (5.2.0-1) ... Setting up libxcb-dri3-0:armhf (1.13.1-2) ... Setting up libxcb-glx0:armhf (1.13.1-2) ... Setting up libxcb-randr0:armhf (1.13.1-2) ... Setting up libxcb-xfixes0:armhf (1.13.1-2) ... Setting up libxcb-icccm4:armhf (0.4.1-1.1) ... Setting up libxcb-render0:armhf (1.13.1-2) ... Setting up libltdl-dev:armhf (2.4.6-8) ... Setting up po-debconf (1.0.21) ... Setting up libdrm-amdgpu1:armhf (2.4.95-1) ... Setting up libhwloc-dev:armhf (1.11.12-1) ... Setting up libdrm-exynos1:armhf (2.4.95-1) ... Setting up libdrm-freedreno1:armhf (2.4.95-1) ... Setting up libarmadillo9 (1:9.200.7+dfsg-1) ... Setting up libdrm-omap1:armhf (2.4.95-1) ... Setting up libgbm1:armhf (18.3.2-1ubuntu1) ... Setting up libx11-6:armhf (2:1.6.7-1) ... Setting up libinput10:armhf (1.12.4-1) ... Setting up libgl1-mesa-dri:armhf (18.3.2-1ubuntu1) ... Setting up tcl (8.6.0+9) ... Setting up libhdf5-cpp-103:armhf (1.10.4+repack-9) ... Setting up libnl-route-3-dev:armhf (3.4.0-1) ... Setting up libpoppler82:armhf (0.71.0-2ubuntu1) ... Setting up libbluray2:armhf (1:1.0.2-3) ... Setting up libhdf5-dev (1.10.4+repack-9) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libgeos-dev (3.7.1-1) ... Setting up libdrm-tegra0:armhf (2.4.95-1) ... Setting up libxcb-util1:armhf (0.4.0-0ubuntu3) ... Setting up libpmix2:armhf (3.1.1-1) ... Setting up libxkbcommon-x11-0:armhf (0.8.2-1) ... Setting up python2 (2.7.15-4) ... Setting up libogdi3.2-dev (3.2.1+ds-4) ... Setting up libwebp-dev:armhf (0.6.1-2) ... Setting up libxcb-sync1:armhf (1.13.1-2) ... Setting up libgssapi-krb5-2:armhf (1.17-1) ... Setting up libpython2-dev:armhf (2.7.15-4) ... Setting up libpython-stdlib:armhf (2.7.15-4) ... Setting up libkmlengine1:armhf (1.3.0-7) ... Setting up libfreetype6-dev:armhf (2.9.1-3) ... Setting up libice-dev:armhf (2:1.0.9-2) ... Setting up ibverbs-providers:armhf (21.0-1) ... Setting up libarpack2-dev:armhf (3.7.0-1) ... Setting up libxcb-shm0:armhf (1.13.1-2) ... Setting up libxt6:armhf (1:1.1.5-1) ... Setting up libxcb-shape0:armhf (1.13.1-2) ... Setting up libxrender1:armhf (1:0.9.10-1) ... Setting up libxcb1-dev:armhf (1.13.1-2) ... Setting up libxcb-glx0-dev:armhf (1.13.1-2) ... Setting up libavahi-client3:armhf (0.7-4ubuntu4) ... Setting up libxcb-keysyms1:armhf (0.4.0-1) ... Setting up libegl-mesa0:armhf (18.3.2-1ubuntu1) ... Setting up libx11-dev:armhf (2:1.6.7-1) ... Setting up libqt5webchannel5:armhf (5.11.3-2) ... Setting up libxft2:armhf (2.3.2-2) ... Setting up libgssapi3-heimdal:armhf (7.5.0+dfsg-2.1) ... Setting up openssh-client (1:7.9p1-5) ... Setting up libibverbs-dev:armhf (21.0-1) ... Setting up tcl-dev:armhf (8.6.0+9) ... Setting up python (2.7.15-4) ... Setting up libxcb-sync-dev:armhf (1.13.1-2) ... Setting up fontconfig (2.13.0-5ubuntu3) ... Regenerating fonts cache... done. Setting up libcups2:armhf (2.2.10-3) ... Setting up python-u-msgpack (2.1-1) ... Setting up libarmadillo-dev (1:9.200.7+dfsg-1) ... Setting up libfontconfig1-dev:armhf (2.13.0-5ubuntu3) ... Setting up python-idna (2.6-1) ... Setting up libx11-xcb-dev:armhf (2:1.6.7-1) ... Setting up libpython-dev:armhf (2.7.15-4) ... Setting up python-hyperlink (17.3.1-2) ... Setting up libsm-dev:armhf (2:1.2.2-1) ... Setting up libxcb-render-util0:armhf (0.3.9-1) ... Setting up python-asn1crypto (0.24.0-1) ... Setting up libopenmpi3:armhf (3.1.3-10) ... Setting up libpoppler-dev:armhf (0.71.0-2ubuntu1) ... Setting up python-attr (18.2.0-1) ... Setting up libxdamage1:armhf (1:1.1.4-3) ... Setting up python-snappy (0.5.3-1build1) ... Setting up libxcb-image0:armhf (0.4.0-1build1) ... Setting up libxext6:armhf (2:1.3.3-1) ... Setting up libxfixes3:armhf (1:5.0.3-1) ... Setting up python-pyasn1 (0.4.2-3) ... Setting up libdrm-dev:armhf (2.4.95-1) ... Setting up libssh-gcrypt-4:armhf (0.8.6-2) ... Setting up libxss1:armhf (1:1.2.3-1) ... Setting up libgdk-pixbuf2.0-0:armhf (2.38.0+dfsg-7) ... Setting up python-twisted-bin:armhf (18.9.0-3) ... Setting up libvdpau1:armhf (1.1.1-8ubuntu1) ... Setting up libxrender-dev:armhf (1:0.9.10-1) ... Setting up python-pkg-resources (40.6.3-1) ... Setting up libkmlconvenience1:armhf (1.3.0-7) ... Setting up openmpi-bin (3.1.3-10) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up python-pyasn1-modules (0.2.1-0.2) ... Setting up cython (0.29.2-2build1) ... Setting up python-wsaccel (0.6.2-1build2) ... Setting up libxcb-dri2-0-dev:armhf (1.13.1-2) ... Setting up libxcb-render0-dev:armhf (1.13.1-2) ... Setting up python-configparser (3.5.0b2-1) ... Setting up libegl1:armhf (1.1.0-1) ... Setting up python-cffi-backend (1.11.5-3ubuntu2) ... Setting up libxft-dev:armhf (2.3.2-2) ... Setting up python-incremental (16.10.1-3) ... Setting up libxcb-dri3-dev:armhf (1.13.1-2) ... Setting up python-six (1.12.0-1) ... Setting up python-constantly (15.1.0-1) ... Setting up python-cbor (1.0.0-1build2) ... Setting up python-zope.interface (4.3.2-1build4) ... Setting up libldap-2.4-2:armhf (2.4.47+dfsg-2ubuntu1) ... Setting up libkmlregionator1:armhf (1.3.0-7) ... Setting up libxext-dev:armhf (2:1.3.3-1) ... Setting up libpango-1.0-0:armhf (1.42.4-6) ... Setting up python-enum34 (1.1.6-2) ... Setting up libxcb-shape0-dev:armhf (1.13.1-2) ... Setting up python-concurrent.futures (3.2.0-2) ... Setting up libhdf5-openmpi-103:armhf (1.10.4+repack-9) ... Setting up libxxf86vm1:armhf (1:1.1.4-1) ... Setting up libva-x11-2:armhf (2.3.0-2) ... Setting up python-ubjson (0.12.0-1build1) ... Setting up python-ipaddress (1.0.17-1) ... Setting up libxxf86vm-dev:armhf (1:1.1.4-1) ... Setting up libxfixes-dev:armhf (1:5.0.3-1) ... Setting up python-trie (0.2+ds-1) ... Setting up python-automat (0.6.0-1) ... Setting up python-pil:armhf (5.4.1-1) ... Setting up libboost-mpi1.67.0 (1.67.0-11) ... Setting up python-future (0.15.2-5) ... update-alternatives: using /usr/bin/python2-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python2-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up libglx-mesa0:armhf (18.3.2-1ubuntu1) ... Setting up mpi-default-bin (1.13) ... Setting up libxi6:armhf (2:1.7.9-1) ... Setting up libcairo2:armhf (1.16.0-2) ... Setting up libxcb-randr0-dev:armhf (1.13.1-2) ... Setting up libxt-dev:armhf (1:1.1.5-1) ... Setting up libpoppler-private-dev:armhf (0.71.0-2ubuntu1) ... Setting up python-lz4 (1.1.0+dfsg-1build1) ... Setting up python-nacl (1.3.0-2) ... Setting up mesa-common-dev:armhf (18.3.2-1ubuntu1) ... Setting up python-trollius (2.1~b1-5) ... Setting up libxcb-xfixes0-dev:armhf (1.13.1-2) ... Setting up libcurl3-gnutls:armhf (7.63.0-1) ... Setting up libavutil56:armhf (7:4.1-1) ... Setting up libtk8.6:armhf (8.6.9-1) ... Setting up libopenmpi-dev:armhf (3.1.3-10) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode Setting up libcurl4:armhf (7.63.0-1) ... Setting up libxdamage-dev:armhf (1:1.1.4-3) ... Setting up python-qrcode (6.0-1) ... update-alternatives: using /usr/bin/python2-qr to provide /usr/bin/qr (qr) in auto mode Setting up libxss-dev:armhf (1:1.2.3-1) ... Setting up mpi-default-dev (1.13) ... Setting up libkml-dev:armhf (1.3.0-7) ... Setting up libpangoft2-1.0-0:armhf (1.42.4-6) ... Setting up libhdf5-openmpi-dev (1.10.4+repack-9) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode Setting up libdapclient6v5:armhf (3.20.2-1) ... Setting up libpq5:armhf (11.1-2) ... Setting up libqt5gui5:armhf (5.11.3+dfsg-2ubuntu1) ... Setting up libnetcdf13:armhf (1:4.6.2-1build1) ... Setting up python-cryptography (2.3-1ubuntu2) ... Setting up libxcb-present-dev:armhf (1.13.1-2) ... Setting up cmake (3.13.2-1) ... Setting up libtheora0:armhf (1.1.1+dfsg.1-14) ... Setting up libglx0:armhf (1.1.0-1) ... Setting up libcurl4-gnutls-dev:armhf (7.63.0-1) ... Setting up libnetcdf-dev (1:4.6.2-1build1) ... Setting up libxerces-c3.2:armhf (3.2.2+debian-1build1) ... Setting up libswscale5:armhf (7:4.1-1) ... Setting up libboost-mpi1.67-dev (1.67.0-11) ... Setting up python-mpi4py (2.0.0-3build3) ... Setting up libqt5quick5:armhf (5.11.3-2build1) ... Setting up libavutil-dev:armhf (7:4.1-1) ... Setting up libnetcdf-c++4 (4.2-11) ... Setting up libnetcdf-cxx-legacy-dev (4.2-11) ... Setting up libxerces-c-dev (3.2.2+debian-1build1) ... Setting up tk8.6 (8.6.9-1) ... Setting up libpq-dev (11.1-2) ... Setting up libqt5widgets5:armhf (5.11.3+dfsg-2ubuntu1) ... Setting up libswresample3:armhf (7:4.1-1) ... Setting up libdap-dev:armhf (3.20.2-1) ... Setting up python-openssl (18.0.0-1) ... Setting up libtheora-dev:armhf (1.1.1+dfsg.1-14) ... Setting up tk8.6-dev:armhf (8.6.9-1) ... Setting up libpangocairo-1.0-0:armhf (1.42.4-6) ... Setting up libhdf5-mpi-dev (1.10.4+repack-9) ... Setting up libqt5printsupport5:armhf (5.11.3+dfsg-2ubuntu1) ... Setting up libqt5opengl5:armhf (5.11.3+dfsg-2ubuntu1) ... Setting up libhdf4-alt-dev (4.2.13-4) ... Setting up libswscale-dev:armhf (7:4.1-1) ... Setting up tk (8.6.0+9) ... Setting up libswresample-dev:armhf (7:4.1-1) ... Setting up libgl1:armhf (1.1.0-1) ... Setting up libglu1-mesa:armhf (9.0.0-2.1build1) ... Setting up libboost-mpi-dev (1.67.0.1) ... Setting up python-service-identity (16.0.0-2) ... Setting up libgl2ps1.4 (1.4.0+dfsg1-2) ... Setting up librsvg2-2:armhf (2.44.10-1) ... Setting up libqt5webkit5:armhf (5.212.0~alpha2-19ubuntu1) ... Setting up tk-dev:armhf (8.6.0+9) ... Setting up libglvnd-dev:armhf (1.1.0-1) ... Setting up python-twisted-core (18.9.0-3) ... Setting up libgl1-mesa-dev:armhf (18.3.2-1ubuntu1) ... Setting up python-twisted (18.9.0-3) ... Setting up libgl2ps-dev (1.4.0+dfsg1-2) ... Setting up libavcodec58:armhf (7:4.1-1) ... Setting up libglu1-mesa-dev:armhf (9.0.0-2.1build1) ... Setting up libchromaprint1:armhf (1.4.3-3) ... Setting up python-txaio (2.10.0-1) ... Setting up libavformat58:armhf (7:4.1-1) ... Setting up libavcodec-dev:armhf (7:4.1-1) ... Setting up libavformat-dev:armhf (7:4.1-1) ... Setting up python-autobahn (17.10.1+dfsg1-3) ... Setting up dh-autoreconf (19) ... Setting up odbcinst (2.3.6-0.1build1) ... Setting up dh-strip-nondeterminism (1.1.0-1) ... Setting up odbcinst1debian2:armhf (2.3.6-0.1build1) ... Setting up debhelper (12ubuntu1) ... Setting up unixodbc-dev:armhf (2.3.6-0.1build1) ... Setting up libgdal20 (2.4.0+dfsg-1build1) ... Setting up libvtk6.3 (6.3.0+dfsg2-2build6) ... Setting up libvtk6.3-qt (6.3.0+dfsg2-2build6) ... Setting up python-vtk6 (6.3.0+dfsg2-2build6) ... Setting up libgdal-dev (2.4.0+dfsg-1build1) ... Setting up vtk6 (6.3.0+dfsg2-2build6) ... Setting up libvtk6-jni (6.3.0+dfsg2-2build6) ... Setting up tcl-vtk6 (6.3.0+dfsg2-2build6) ... Setting up libvtk6-java (6.3.0+dfsg2-2build6) ... Setting up libvtk6-dev (6.3.0+dfsg2-2build6) ... Setting up sbuild-build-depends-liggghts-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Processing triggers for systemd (240-4ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-141-generic arm64 (armv7l) Toolchain package versions: binutils_2.31.1-11ubuntu1 dpkg-dev_1.19.2ubuntu2 g++-8_8.2.0-14ubuntu1 gcc-8_8.2.0-14ubuntu1 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-14ubuntu1 libstdc++6_8.2.0-14ubuntu1 linux-libc-dev_4.19.0-11.12 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 apt_1.8.0~alpha3.1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.45 bash_5.0-1ubuntu1 binutils_2.31.1-11ubuntu1 binutils-arm-linux-gnueabihf_2.31.1-11ubuntu1 binutils-common_2.31.1-11ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.33.1-0.1ubuntu1 build-essential_12.5ubuntu2 bzip2_1.0.6-9 ca-certificates_20180409 cmake_3.13.2-1 cmake-data_3.13.2-1 coreutils_8.30-1ubuntu1 cpp_4:8.2.0-2ubuntu2 cpp-8_8.2.0-14ubuntu1 cython_0.29.2-2build1 dash_0.5.10.2-4ubuntu1 debconf_1.5.70 debhelper_12ubuntu1 debianutils_4.8.6.1 default-libmysqlclient-dev_1.0.5 dh-autoreconf_19 dh-strip-nondeterminism_1.1.0-1 diffutils_1:3.6-1 dmsetup_2:1.02.145-4.1ubuntu4 dpkg_1.19.2ubuntu2 dpkg-dev_1.19.2ubuntu2 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1ubuntu1 file_1:5.35-2 findutils_4.6.0+git+20190105-2 fontconfig_2.13.0-5ubuntu3 fontconfig-config_2.13.0-5ubuntu3 fonts-dejavu-core_2.37-1 g++_4:8.2.0-2ubuntu2 g++-8_8.2.0-14ubuntu1 gcc_4:8.2.0-2ubuntu2 gcc-8_8.2.0-14ubuntu1 gcc-8-base_8.2.0-14ubuntu1 gdal-data_2.4.0+dfsg-1build1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpg_2.2.12-1ubuntu2 gpg-agent_2.2.12-1ubuntu2 gpgconf_2.2.12-1ubuntu2 gpgv_2.2.12-1ubuntu2 grep_3.3-1 groff-base_1.22.4-2 gzip_1.9-3 hdf5-helpers_1.10.4+repack-9 hostname_3.21 ibverbs-providers_21.0-1 icu-devtools_63.1-5 init_1.56+nmu1 init-system-helpers_1.56+nmu1 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.5 iso-codes_4.1-1 libacl1_2.2.52-3build1 libaec-dev_1.0.2-1 libaec0_1.0.2-1 libaom0_1.0.0-3 libapparmor1_2.12-4ubuntu10 libapt-pkg5.0_1.8.0~alpha3.1 libarchive-zip-perl_1.64-1 libarchive13_3.3.3-3 libargon2-1_0~20171227-0.2 libarmadillo-dev_1:9.200.7+dfsg-1 libarmadillo9_1:9.200.7+dfsg-1 libarpack2_3.7.0-1 libarpack2-dev_3.7.0-1 libasan5_8.2.0-14ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-2.1 libassuan0_2.5.2-1 libatomic1_8.2.0-14ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.8.3-1ubuntu3 libaudit1_1:2.8.3-1ubuntu3 libavahi-client3_0.7-4ubuntu4 libavahi-common-data_0.7-4ubuntu4 libavahi-common3_0.7-4ubuntu4 libavcodec-dev_7:4.1-1 libavcodec58_7:4.1-1 libavformat-dev_7:4.1-1 libavformat58_7:4.1-1 libavutil-dev_7:4.1-1 libavutil56_7:4.1-1 libbinutils_2.31.1-11ubuntu1 libblas-dev_3.8.0-2 libblas3_3.8.0-2 libblkid1_2.33.1-0.1ubuntu1 libbluray2_1:1.0.2-3 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python-txaio_2.10.0-1 python-u-msgpack_2.1-1 python-ubjson_0.12.0-1build1 python-vtk6_6.3.0+dfsg2-2build6 python-wsaccel_0.6.2-1build2 python-zope.interface_4.3.2-1build4 python2_2.7.15-4 python2-minimal_2.7.15-4 python2.7_2.7.15-5build1 python2.7-minimal_2.7.15-5build1 readline-common_8.0-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-liggghts-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 shared-mime-info_1.10-1 systemd_240-4ubuntu1 systemd-sysv_240-4ubuntu1 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 tar_1.30+dfsg-4 tcl_8.6.0+9 tcl-dev_8.6.0+9 tcl-vtk6_6.3.0+dfsg2-2build6 tcl8.6_8.6.9+dfsg-1 tcl8.6-dev_8.6.9+dfsg-1 tk_8.6.0+9 tk-dev_8.6.0+9 tk8.6_8.6.9-1 tk8.6-dev_8.6.9-1 tzdata_2018i-1 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 unixodbc-dev_2.3.6-0.1build1 util-linux_2.32-0.1ubuntu2 uuid-dev_2.33.1-0.1ubuntu1 vtk6_6.3.0+dfsg2-2build6 x11-common_1:7.7+19ubuntu8 x11proto-core-dev_2018.4-4 x11proto-damage-dev_1:2018.4-4 x11proto-dev_2018.4-4 x11proto-fixes-dev_1:2018.4-4 x11proto-scrnsaver-dev_2018.4-4 x11proto-xext-dev_2018.4-4 x11proto-xf86vidmode-dev_2018.4-4 xkb-data_2.23.1-1ubuntu1.18.10.1 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 zlib1g-dev_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Jan 22 19:41:16 2019 UTC gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./liggghts_3.8.0+repack1-4.dsc dpkg-source: info: extracting liggghts in liggghts-3.8.0+repack1 dpkg-source: info: unpacking liggghts_3.8.0+repack1.orig.tar.xz dpkg-source: info: unpacking liggghts_3.8.0+repack1-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_add_cmake_files.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-16311982 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-16311982 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-16311982 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package liggghts dpkg-buildpackage: info: source version 3.8.0+repack1-4 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --buildsystem=cmake --builddirectory=/<>/liggghts-3.8.0+repack1/debian/build dh_auto_clean -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_autoreconf_clean -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_clean -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build debian/rules build-arch dh build-arch --buildsystem=cmake --builddirectory=/<>/liggghts-3.8.0+repack1/debian/build dh_update_autotools_config -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_autoreconf -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_auto_configure -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build cd debian/build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf ../.. -- The C compiler identification is GNU 8.2.0 -- The CXX compiler identification is GNU 8.2.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Boost version: 1.67.0 -- Found the following Boost libraries: -- mpi -- serialization -- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython2.7.so (found version "2.7.15+") -- The imported target "vtkRenderingPythonTkWidgets" references the file "/usr/lib/arm-linux-gnueabihf/libvtkRenderingPythonTkWidgets.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake" but not all the files it references. -- The imported target "vtk" references the file "/usr/bin/vtk" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake" but not all the files it references. -- Found VTK6 -- Found Eigen3 -- Found JPEG: /usr/lib/arm-linux-gnueabihf/libjpeg.so (found version "80") -- Found MPI_C: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY -- Build files have been written to: /<>/liggghts-3.8.0+repack1/debian/build dh_auto_build -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build cd debian/build && make -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -S/<>/liggghts-3.8.0+repack1 -B/<>/liggghts-3.8.0+repack1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/liggghts-3.8.0+repack1/debian/build/CMakeFiles /<>/liggghts-3.8.0+repack1/debian/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/GenerateHeaders.dir/build.make src/CMakeFiles/GenerateHeaders.dir/depend make[3]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' cd /<>/liggghts-3.8.0+repack1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/liggghts-3.8.0+repack1 /<>/liggghts-3.8.0+repack1/src /<>/liggghts-3.8.0+repack1/debian/build /<>/liggghts-3.8.0+repack1/debian/build/src /<>/liggghts-3.8.0+repack1/debian/build/src/CMakeFiles/GenerateHeaders.dir/DependInfo.cmake --color= Scanning dependencies of target GenerateHeaders make[3]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/GenerateHeaders.dir/build.make src/CMakeFiles/GenerateHeaders.dir/build make[3]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' cd /<>/liggghts-3.8.0+repack1/src && sh Make.sh style cd /<>/liggghts-3.8.0+repack1/src && sh Make.sh models Generating model list, this could take a moment... You have 3240 model combinations. (limit = 1200) Some model combinations are skipped automatically. You may add missing combinations by yourself to 'style_contact_model_user.whitelist'. Creating list of contact models completed. make[3]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' [ 0%] Built target GenerateHeaders make -f src/CMakeFiles/libliggghts.dir/build.make src/CMakeFiles/libliggghts.dir/depend make[3]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' cd /<>/liggghts-3.8.0+repack1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/liggghts-3.8.0+repack1 /<>/liggghts-3.8.0+repack1/src /<>/liggghts-3.8.0+repack1/debian/build /<>/liggghts-3.8.0+repack1/debian/build/src /<>/liggghts-3.8.0+repack1/debian/build/src/CMakeFiles/libliggghts.dir/DependInfo.cmake --color= Scanning dependencies of target libliggghts make[3]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/libliggghts.dir/build.make src/CMakeFiles/libliggghts.dir/build make[3]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/angle.cpp.o [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom.cpp.o [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_map.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/angle.cpp.o -c /<>/liggghts-3.8.0+repack1/src/angle.cpp cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom.cpp cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_map.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_map.cpp cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o -c /<>/liggghts-3.8.0+repack1/src/angle_hybrid.cpp [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec.cpp /<>/liggghts-3.8.0+repack1/src/angle_hybrid.cpp: In member function ‘virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)’: /<>/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:363:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:372:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/angle_hybrid.cpp:375:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 1%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_atomic.cpp [ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_charge.cpp [ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_ellipsoid.cpp [ 2%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_full.cpp [ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_hybrid.cpp [ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_line.cpp [ 3%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_molecular.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_sph.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_sph_var.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_sphere.cpp [ 4%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_sphere_w.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_superquadric.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/atom_vec_tri.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/atom_vec_tri.cpp.o -c /<>/liggghts-3.8.0+repack1/src/atom_vec_tri.cpp [ 5%] Building CXX object src/CMakeFiles/libliggghts.dir/bond.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/bond.cpp.o -c /<>/liggghts-3.8.0+repack1/src/bond.cpp [ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bond_harmonic.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/bond_harmonic.cpp.o -c /<>/liggghts-3.8.0+repack1/src/bond_harmonic.cpp [ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/bond_hybrid.cpp.o -c /<>/liggghts-3.8.0+repack1/src/bond_hybrid.cpp [ 6%] Building CXX object src/CMakeFiles/libliggghts.dir/bounding_box.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/bounding_box.cpp.o -c /<>/liggghts-3.8.0+repack1/src/bounding_box.cpp /<>/liggghts-3.8.0+repack1/src/bond_harmonic.cpp: In member function ‘virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)’: /<>/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:200:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&k[1],sizeof(double),atom->nbondtypes,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/bond_harmonic.cpp:201:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&r0[1],sizeof(double),atom->nbondtypes,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/bond_hybrid.cpp: In member function ‘virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)’: /<>/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:351:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:360:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/bond_hybrid.cpp:363:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/cfd_datacoupling.cpp.o -c /<>/liggghts-3.8.0+repack1/src/cfd_datacoupling.cpp [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o [ 7%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/cfd_datacoupling_file.cpp.o -c /<>/liggghts-3.8.0+repack1/src/cfd_datacoupling_file.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/cfd_datacoupling_mpi.cpp.o -c /<>/liggghts-3.8.0+repack1/src/cfd_datacoupling_mpi.cpp cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/cfd_regionmodel_none.cpp.o -c /<>/liggghts-3.8.0+repack1/src/cfd_regionmodel_none.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/change_box.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/change_box.cpp.o -c /<>/liggghts-3.8.0+repack1/src/change_box.cpp [ 8%] Building CXX object src/CMakeFiles/libliggghts.dir/citeme.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/citeme.cpp.o -c /<>/liggghts-3.8.0+repack1/src/citeme.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/comm.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/comm.cpp.o -c /<>/liggghts-3.8.0+repack1/src/comm.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_atom_molecule.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_atom_molecule.cpp [ 9%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_bond_local.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_bond_local.cpp [ 10%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_centro_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_centro_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_centro_atom.cpp [ 10%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_cluster_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_cluster_atom.cpp [ 10%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_cna_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_cna_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_cna_atom.cpp [ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_com.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_com.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_com.cpp [ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_com_molecule.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_com_molecule.cpp [ 11%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_contact_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_contact_atom.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_contact_atom_gran.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_contact_atom_gran.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_coord_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_coord_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_coord_atom.cpp [ 12%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_displace_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_displace_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_displace_atom.cpp [ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_erotate.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_erotate.cpp [ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_asphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_erotate_asphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_erotate_asphere.cpp [ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_multisphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_erotate_multisphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_erotate_multisphere.cpp [ 13%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_sphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_erotate_sphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_erotate_sphere.cpp [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_erotate_sphere_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_erotate_sphere_atom.cpp [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_erotate_superquadric.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_erotate_superquadric.cpp [ 14%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_group_group.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_group_group.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_group_group.cpp [ 15%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_gyration.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_gyration.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_gyration.cpp [ 15%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_gyration_molecule.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_gyration_molecule.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_gyration_molecule.cpp [ 15%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_inertia_molecule.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_inertia_molecule.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_inertia_molecule.cpp [ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_ke.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_ke.cpp [ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_ke_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_ke_atom.cpp [ 16%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_ke_multisphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_ke_multisphere.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_msd.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_msd.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_msd.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_msd_molecule.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_msd_molecule.cpp [ 17%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_nparticles_tracer_region.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_nparticles_tracer_region.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pair_gran_local.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_pair_gran_local.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_pair_gran_local.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pe.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_pe.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_pe.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pe_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_pe_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_pe_atom.cpp [ 18%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_pressure.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_pressure.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_pressure.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_property_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_property_atom.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_local.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_property_local.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_property_local.cpp [ 19%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_property_molecule.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_property_molecule.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rdf.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_rdf.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_rdf.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_reduce.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_reduce.cpp [ 20%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_reduce_region.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_reduce_region.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_rigid.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_rigid.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_rigid.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_slice.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_slice.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_slice.cpp [ 21%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_stress_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_stress_atom.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/compute_temp.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/compute_temp.cpp.o -c /<>/liggghts-3.8.0+repack1/src/compute_temp.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/contact_models.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/contact_models.cpp.o -c /<>/liggghts-3.8.0+repack1/src/contact_models.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/container_base.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/container_base.cpp.o -c /<>/liggghts-3.8.0+repack1/src/container_base.cpp [ 22%] Building CXX object src/CMakeFiles/libliggghts.dir/create_atoms.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/create_atoms.cpp.o -c /<>/liggghts-3.8.0+repack1/src/create_atoms.cpp [ 23%] Building CXX object src/CMakeFiles/libliggghts.dir/create_box.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/create_box.cpp.o -c /<>/liggghts-3.8.0+repack1/src/create_box.cpp [ 23%] Building CXX object src/CMakeFiles/libliggghts.dir/custom_value_tracker.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/custom_value_tracker.cpp.o -c /<>/liggghts-3.8.0+repack1/src/custom_value_tracker.cpp [ 23%] Building CXX object src/CMakeFiles/libliggghts.dir/delete_atoms.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/delete_atoms.cpp.o -c /<>/liggghts-3.8.0+repack1/src/delete_atoms.cpp [ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/delete_bonds.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/delete_bonds.cpp.o -c /<>/liggghts-3.8.0+repack1/src/delete_bonds.cpp [ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/dihedral.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dihedral.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dihedral.cpp [ 24%] Building CXX object src/CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dihedral_hybrid.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp [ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/displace_atoms.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/displace_atoms.cpp.o -c /<>/liggghts-3.8.0+repack1/src/displace_atoms.cpp [ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/domain.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/domain.cpp.o -c /<>/liggghts-3.8.0+repack1/src/domain.cpp [ 25%] Building CXX object src/CMakeFiles/libliggghts.dir/dump.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump.cpp /<>/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp: In member function ‘virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)’: /<>/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:352:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:361:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/dihedral_hybrid.cpp:364:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_atom_vtk.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp [ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_custom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_custom.cpp [ 26%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_custom_vtk.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_custom_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_custom_vtm.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_custom_vtm.cpp /<>/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp: In member function ‘void LAMMPS_NS::DumpATOMVTK::setFileCurrent()’: /<>/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp:367:19: warning: ‘s’ directive writing 1 byte into a region of size between 0 and 7 [-Wformat-overflow=] sprintf(pad,"%%s%%0%d_%%d%s%%s",padflag,&bif[1]); ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2684, from /<>/liggghts-3.8.0+repack1/src/dump.h:49, from /<>/liggghts-3.8.0+repack1/src/dump_atom_vtk.h:48, from /<>/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp:40: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 11 and 28 bytes into a destination of size 16 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/liggghts-3.8.0+repack1/src/dump_atom_vtk.h:51, from /<>/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp:40: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const LAMMPS_NS::DumpATOMVTK::DataVTK&}; _Tp = LAMMPS_NS::DumpATOMVTK::DataVTK; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from /<>/liggghts-3.8.0+repack1/src/dump_atom_vtk.h:51, from /<>/liggghts-3.8.0+repack1/src/dump_atom_vtk.cpp:40: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void LAMMPS_NS::DumpATOMVTK::vtkExportData::add(LAMMPS_NS::DumpATOMVTK::DataVTK&)’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_decomposition_vtk.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_decomposition_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_euler_vtk.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_euler_vtk.cpp [ 27%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_image.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_image.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_image.cpp [ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_local.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_local.cpp [ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_local_gran.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_local_gran.cpp [ 28%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_local_gran_vtk.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_local_gran_vtk.cpp [ 29%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_mesh.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_mesh.cpp [ 29%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_stl.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_mesh_stl.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_mesh_stl.cpp [ 29%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_mesh_vtk.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_mesh_vtk.cpp [ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_mesh_vtm.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_mesh_vtm.cpp [ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_movie.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_movie.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_movie.cpp [ 30%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_particle.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_particle.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_particle.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_vtk.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_vtk.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_vtk.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/dump_xyz.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/dump_xyz.cpp.o -c /<>/liggghts-3.8.0+repack1/src/dump_xyz.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/error.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/error.cpp.o -c /<>/liggghts-3.8.0+repack1/src/error.cpp [ 31%] Building CXX object src/CMakeFiles/libliggghts.dir/finish.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/finish.cpp.o -c /<>/liggghts-3.8.0+repack1/src/finish.cpp [ 32%] Building CXX object src/CMakeFiles/libliggghts.dir/fix.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix.cpp [ 32%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_adapt.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_adapt.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_adapt.cpp [ 32%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_addforce.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_addforce.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_addforce.cpp [ 33%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_ave_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_ave_atom.cpp [ 33%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_correlate.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_ave_correlate.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp [ 33%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_ave_euler.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_ave_euler.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_ave_histo.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp /<>/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp: In member function ‘virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()’: /<>/liggghts-3.8.0+repack1/src/fix_ave_correlate.cpp:520:16: warning: ignoring return value of ‘int ftruncate(int, __off_t)’, declared with attribute warn_unused_result [-Wunused-result] ftruncate(fileno(fp),fileend); ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp: In member function ‘virtual void LAMMPS_NS::FixAveHisto::end_of_step()’: /<>/liggghts-3.8.0+repack1/src/fix_ave_histo.cpp:848:16: warning: ignoring return value of ‘int ftruncate(int, __off_t)’, declared with attribute warn_unused_result [-Wunused-result] ftruncate(fileno(fp),fileend); ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_ave_spatial.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp [ 34%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_ave_time.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_ave_time.cpp /<>/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp: In member function ‘virtual void LAMMPS_NS::FixAveSpatial::end_of_step()’: /<>/liggghts-3.8.0+repack1/src/fix_ave_spatial.cpp:917:16: warning: ignoring return value of ‘int ftruncate(int, __off_t)’, declared with attribute warn_unused_result [-Wunused-result] ftruncate(fileno(fp),fileend); ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_aveforce.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_aveforce.cpp /<>/liggghts-3.8.0+repack1/src/fix_ave_time.cpp: In member function ‘void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)’: /<>/liggghts-3.8.0+repack1/src/fix_ave_time.cpp:670:16: warning: ignoring return value of ‘int ftruncate(int, __off_t)’, declared with attribute warn_unused_result [-Wunused-result] ftruncate(fileno(fp),fileend); ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_base_liggghts.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_base_liggghts.cpp [ 35%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_box_relax.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_box_relax.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_buoyancy.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_buoyancy.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_cfd_coupling.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection.cpp [ 36%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_impl.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_impl.cpp [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_species.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_convection_species.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_force.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_force.cpp [ 37%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_cfd_coupling_force_implicit.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_force_implicit.cpp /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp: In constructor ‘LAMMPS_NS::FixCfdCouplingConvectionSpecies::FixCfdCouplingConvectionSpecies(LAMMPS_NS::LAMMPS*, int, char**)’: /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:75:37: warning: ‘Source’ directive writing 6 bytes into a region of size between 1 and 128 [-Wformat-overflow=] sprintf(sourceName_, "%sSource",speciesName_); ^~~~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2684, from /<>/liggghts-3.8.0+repack1/src/pointers.h:63, from /<>/liggghts-3.8.0+repack1/src/atom.h:49, from /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:43: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 7 and 134 bytes into a destination of size 128 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:76:37: warning: ‘Flux’ directive writing 4 bytes into a region of size between 1 and 128 [-Wformat-overflow=] sprintf(convectiveFluxName_,"%sFlux",speciesName_); ^~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2684, from /<>/liggghts-3.8.0+repack1/src/pointers.h:63, from /<>/liggghts-3.8.0+repack1/src/atom.h:49, from /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:43: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 5 and 132 bytes into a destination of size 128 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:77:37: warning: ‘Capacity’ directive writing 8 bytes into a region of size between 1 and 128 [-Wformat-overflow=] sprintf(capacityName_, "%sCapacity",speciesName_); ^~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2684, from /<>/liggghts-3.8.0+repack1/src/pointers.h:63, from /<>/liggghts-3.8.0+repack1/src/atom.h:49, from /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:43: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 9 and 136 bytes into a destination of size 128 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:78:37: warning: ‘STE’ directive writing 3 bytes into a region of size between 1 and 128 [-Wformat-overflow=] sprintf(steName_, "%sSTE",speciesName_); ^~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2684, from /<>/liggghts-3.8.0+repack1/src/pointers.h:63, from /<>/liggghts-3.8.0+repack1/src/atom.h:49, from /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:43: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 4 and 131 bytes into a destination of size 128 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:79:37: warning: ‘TotalFlux’ directive writing 9 bytes into a region of size between 1 and 128 [-Wformat-overflow=] sprintf(totalFluxName_, "%sTotalFlux",speciesName_); ^~~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2684, from /<>/liggghts-3.8.0+repack1/src/pointers.h:63, from /<>/liggghts-3.8.0+repack1/src/atom.h:49, from /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:43: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 10 and 137 bytes into a destination of size 128 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:80:41: warning: ‘Fluid’ directive writing 5 bytes into a region of size between 1 and 128 [-Wformat-overflow=] sprintf(speciesFluidName_, "%sFluid",speciesName_); ^~~~~~~~~ In file included from /usr/include/stdio.h:873, from /usr/include/c++/8/cstdio:42, from /usr/include/c++/8/ext/string_conversions.h:43, from /usr/include/c++/8/bits/basic_string.h:6400, from /usr/include/c++/8/string:52, from /usr/include/c++/8/stdexcept:39, from /usr/include/c++/8/array:39, from /usr/include/c++/8/tuple:39, from /usr/include/c++/8/bits/stl_map.h:63, from /usr/include/c++/8/map:61, from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42, from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2684, from /<>/liggghts-3.8.0+repack1/src/pointers.h:63, from /<>/liggghts-3.8.0+repack1/src/atom.h:49, from /<>/liggghts-3.8.0+repack1/src/fix_cfd_coupling_convection_species.cpp:43: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 6 and 133 bytes into a destination of size 128 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_check_timestep_gran.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_check_timestep_gran.cpp [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_check_timestep_sph.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp [ 38%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_contact_history.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_contact_history.cpp /<>/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:63: warning: "BIG" redefined #define BIG 1000000. In file included from /<>/liggghts-3.8.0+repack1/src/region_neighbor_list_I.h:48, from /<>/liggghts-3.8.0+repack1/src/region_neighbor_list.h:183, from /<>/liggghts-3.8.0+repack1/src/surface_mesh.h:54, from /<>/liggghts-3.8.0+repack1/src/tri_mesh.h:47, from /<>/liggghts-3.8.0+repack1/src/fix_mesh_surface.h:56, from /<>/liggghts-3.8.0+repack1/src/fix_wall_gran.h:53, from /<>/liggghts-3.8.0+repack1/src/fix_check_timestep_sph.cpp:52: /<>/liggghts-3.8.0+repack1/src/domain_definitions.h:60: note: this is the location of the previous definition #define BIG 1.0e20 [ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_contact_history_mesh.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_contact_history_mesh.cpp [ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_contact_property_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_contact_property_atom.cpp [ 39%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_contact_property_atom_wall.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_contact_property_atom_wall.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_continuum_weighted.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_continuum_weighted.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_deform.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_deform.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_deform_check.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_deform_check.cpp [ 40%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_diam_max.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_diam_max.cpp [ 41%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_drag.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_drag.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_drag.cpp [ 41%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_dt_reset.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_dt_reset.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_dt_reset.cpp [ 41%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_efield.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_efield.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_efield.cpp [ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_enforce2d.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_enforce2d.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_enforce2d.cpp [ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_external.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_external.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_external.cpp [ 42%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_fiber_spring_simple.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_fiber_spring_simple.cpp [ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_freeze.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_freeze.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_freeze.cpp [ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_gravity.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_gravity.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_gravity.cpp [ 43%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_heat_gran.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_heat_gran.cpp [ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_heat_gran_conduction.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_heat_gran_conduction.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_heat_gran_conduction.cpp [ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_insert.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_insert.cpp [ 44%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert_pack.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_insert_pack.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_insert_pack.cpp [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert_rate_region.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_insert_rate_region.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_insert_rate_region.cpp [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_insert_stream.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_insert_stream.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_insert_stream.cpp In file included from /usr/include/c++/8/vector:69, from /<>/liggghts-3.8.0+repack1/src/force.h:59, from /<>/liggghts-3.8.0+repack1/src/fix_insert.cpp:48: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {LAMMPS_NS::Particle}; _Tp = LAMMPS_NS::Particle; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_lb_coupling_onetoone.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_lb_coupling_onetoone.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_lb_coupling_onetoone.cpp /usr/include/c++/8/bits/vector.tcc: In member function ‘void LAMMPS_NS::RegionNeighborList::insert(double*, double, int) [with bool INTERPOLATE = false]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_lineforce.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_lineforce.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_lineforce.cpp [ 46%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_massflow_mesh.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_massflow_mesh.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_massflow_mesh.cpp [ 46%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_massflow_mesh_sieve.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_massflow_mesh_sieve.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_massflow_mesh_sieve.cpp [ 46%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_mesh.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_mesh.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_mesh.cpp [ 47%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_mesh_surface.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_mesh_surface.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_mesh_surface.cpp [ 47%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_minimize.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_minimize.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_minimize.cpp [ 47%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_momentum.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_momentum.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_momentum.cpp [ 48%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_move.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_move.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_move.cpp [ 48%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_move_mesh.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_move_mesh.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_move_mesh.cpp [ 48%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multicontact_halfspace.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_multicontact_halfspace.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_multicontact_halfspace.cpp [ 49%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multisphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_multisphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_multisphere.cpp [ 49%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multisphere_break.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_multisphere_break.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_multisphere_break.cpp [ 49%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_multisphere_comm.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_multisphere_comm.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_multisphere_comm.cpp [ 50%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_neighlist_mesh.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_neighlist_mesh.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_neighlist_mesh.cpp [ 50%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_nve.cpp [ 50%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_asphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_asphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_nve_asphere.cpp [ 50%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_asphere_base.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_asphere_base.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_nve_asphere_base.cpp [ 51%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_asphere_noforce.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_asphere_noforce.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_nve_asphere_noforce.cpp [ 51%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_limit.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_limit.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_nve_limit.cpp [ 51%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_line.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_line.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_nve_line.cpp [ 52%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_noforce.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_noforce.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_nve_noforce.cpp [ 52%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_sph.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_sph.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_nve_sph.cpp [ 52%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_sph_stationary.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_sph_stationary.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_nve_sph_stationary.cpp [ 53%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_sphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_sphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_nve_sphere.cpp [ 53%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_nve_superquadric.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_nve_superquadric.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_nve_superquadric.cpp [ 53%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_particledistribution_discrete.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_particledistribution_discrete.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_particledistribution_discrete.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_planeforce.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_planeforce.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_planeforce.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_print.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_print.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_print.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_property_atom.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_property_atom.cpp [ 54%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_region_tracer.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_property_atom_region_tracer.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_property_atom_region_tracer.cpp [ 55%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_tracer.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_property_atom_tracer.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_property_atom_tracer.cpp [ 55%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_atom_tracer_stream.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_property_atom_tracer_stream.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_property_atom_tracer_stream.cpp [ 55%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_property_global.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_property_global.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_property_global.cpp [ 56%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_read_restart.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_read_restart.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_read_restart.cpp [ 56%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_region_variable.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_region_variable.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_region_variable.cpp [ 56%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_respa.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_respa.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_respa.cpp [ 57%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_rigid.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_rigid.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_rigid.cpp [ 57%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_scalar_transport_equation.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_scalar_transport_equation.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_scalar_transport_equation.cpp [ 57%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_setforce.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_setforce.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_setforce.cpp [ 58%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_sph.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_sph.cpp [ 58%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_density_continuity.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_sph_density_continuity.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_sph_density_continuity.cpp [ 58%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_density_corr.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_sph_density_corr.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_sph_density_corr.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_density_summation.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_sph_density_summation.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_sph_density_summation.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_sph_pressure.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_sph_pressure.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_sph_pressure.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_spring.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_spring.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_spring.cpp [ 59%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_spring_rg.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_spring_rg.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_spring_rg.cpp [ 60%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_spring_self.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_spring_self.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_spring_self.cpp [ 60%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_store.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_store.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_store.cpp [ 60%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_store_force.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_store_force.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_store_force.cpp [ 61%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_store_state.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_store_state.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_store_state.cpp [ 61%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_multiplespheres.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_template_multiplespheres.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_template_multiplespheres.cpp [ 61%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_multisphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_template_multisphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_template_multisphere.cpp [ 62%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_sphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_template_sphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_template_sphere.cpp [ 62%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_template_superquadric.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_template_superquadric.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_template_superquadric.cpp [ 62%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_viscous.cpp.o [ 63%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_wall.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_wall.cpp cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_viscous.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_viscous.cpp [ 63%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall_gran.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_wall_gran.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_wall_gran.cpp [ 63%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall_region.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_wall_region.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_wall_region.cpp [ 63%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall_region_sph.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_wall_region_sph.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_wall_region_sph.cpp [ 64%] Building CXX object src/CMakeFiles/libliggghts.dir/fix_wall_sph.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/fix_wall_sph.cpp.o -c /<>/liggghts-3.8.0+repack1/src/fix_wall_sph.cpp [ 64%] Building CXX object src/CMakeFiles/libliggghts.dir/force.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/force.cpp.o -c /<>/liggghts-3.8.0+repack1/src/force.cpp [ 64%] Building CXX object src/CMakeFiles/libliggghts.dir/global_properties.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/global_properties.cpp.o -c /<>/liggghts-3.8.0+repack1/src/global_properties.cpp [ 65%] Building CXX object src/CMakeFiles/libliggghts.dir/granular_pair_style.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/granular_pair_style.cpp.o -c /<>/liggghts-3.8.0+repack1/src/granular_pair_style.cpp [ 65%] Building CXX object src/CMakeFiles/libliggghts.dir/granular_wall.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/granular_wall.cpp.o -c /<>/liggghts-3.8.0+repack1/src/granular_wall.cpp [ 65%] Building CXX object src/CMakeFiles/libliggghts.dir/group.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/group.cpp.o -c /<>/liggghts-3.8.0+repack1/src/group.cpp [ 66%] Building CXX object src/CMakeFiles/libliggghts.dir/image.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/image.cpp.o -c /<>/liggghts-3.8.0+repack1/src/image.cpp /<>/liggghts-3.8.0+repack1/src/group.cpp: In member function ‘void LAMMPS_NS::Group::read_restart(FILE*)’: /<>/liggghts-3.8.0+repack1/src/group.cpp:569:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&ngroup,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/group.cpp:581:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/group.cpp:585:25: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(names[i],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/libliggghts.dir/improper.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/improper.cpp.o -c /<>/liggghts-3.8.0+repack1/src/improper.cpp [ 66%] Building CXX object src/CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/improper_hybrid.cpp.o -c /<>/liggghts-3.8.0+repack1/src/improper_hybrid.cpp [ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/info.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/info.cpp.o -c /<>/liggghts-3.8.0+repack1/src/info.cpp /<>/liggghts-3.8.0+repack1/src/improper_hybrid.cpp: In member function ‘virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)’: /<>/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:340:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:349:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/improper_hybrid.cpp:352:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/input.cpp.o -c /<>/liggghts-3.8.0+repack1/src/input.cpp [ 67%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/input_mesh_tet.cpp.o -c /<>/liggghts-3.8.0+repack1/src/input_mesh_tet.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/input_mesh_tri.cpp.o -c /<>/liggghts-3.8.0+repack1/src/input_mesh_tri.cpp /<>/liggghts-3.8.0+repack1/src/input.cpp: In member function ‘void LAMMPS_NS::Input::shell()’: /<>/liggghts-3.8.0+repack1/src/input.cpp:1124:10: warning: ignoring return value of ‘int chdir(const char*)’, declared with attribute warn_unused_result [-Wunused-result] chdir(arg[1]); ~~~~~^~~~~~~~ /<>/liggghts-3.8.0+repack1/src/input.cpp:1170:24: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) system(work); ~~~~~~^~~~~~ [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/input_multisphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/input_multisphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/input_multisphere.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/integrate.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/integrate.cpp.o -c /<>/liggghts-3.8.0+repack1/src/integrate.cpp [ 68%] Building CXX object src/CMakeFiles/libliggghts.dir/irregular.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/irregular.cpp.o -c /<>/liggghts-3.8.0+repack1/src/irregular.cpp [ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/kspace.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/kspace.cpp.o -c /<>/liggghts-3.8.0+repack1/src/kspace.cpp [ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lammps.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/lammps.cpp.o -c /<>/liggghts-3.8.0+repack1/src/lammps.cpp [ 69%] Building CXX object src/CMakeFiles/libliggghts.dir/lattice.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/lattice.cpp.o -c /<>/liggghts-3.8.0+repack1/src/lattice.cpp [ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/library.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/library.cpp.o -c /<>/liggghts-3.8.0+repack1/src/library.cpp [ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/library_cfd_coupling.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/library_cfd_coupling.cpp.o -c /<>/liggghts-3.8.0+repack1/src/library_cfd_coupling.cpp [ 70%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/math_extra.cpp.o -c /<>/liggghts-3.8.0+repack1/src/math_extra.cpp [ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra_liggghts_nonspherical.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/math_extra_liggghts_nonspherical.cpp.o -c /<>/liggghts-3.8.0+repack1/src/math_extra_liggghts_nonspherical.cpp [ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/math_extra_liggghts_superquadric.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/math_extra_liggghts_superquadric.cpp.o -c /<>/liggghts-3.8.0+repack1/src/math_extra_liggghts_superquadric.cpp [ 71%] Building CXX object src/CMakeFiles/libliggghts.dir/memory.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/memory.cpp.o -c /<>/liggghts-3.8.0+repack1/src/memory.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/mesh_module.cpp.o -c /<>/liggghts-3.8.0+repack1/src/mesh_module.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/mesh_module_liquidtransfer.cpp.o -c /<>/liggghts-3.8.0+repack1/src/mesh_module_liquidtransfer.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/mesh_module_stress.cpp.o -c /<>/liggghts-3.8.0+repack1/src/mesh_module_stress.cpp [ 72%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/mesh_module_stress_servo.cpp.o -c /<>/liggghts-3.8.0+repack1/src/mesh_module_stress_servo.cpp /<>/liggghts-3.8.0+repack1/src/mesh_module_stress_servo.cpp:67: warning: "BIG" redefined #define BIG 1000000. In file included from /<>/liggghts-3.8.0+repack1/src/region_neighbor_list_I.h:48, from /<>/liggghts-3.8.0+repack1/src/region_neighbor_list.h:183, from /<>/liggghts-3.8.0+repack1/src/surface_mesh.h:54, from /<>/liggghts-3.8.0+repack1/src/tri_mesh.h:47, from /<>/liggghts-3.8.0+repack1/src/mesh_module.h:44, from /<>/liggghts-3.8.0+repack1/src/mesh_module_stress.h:54, from /<>/liggghts-3.8.0+repack1/src/mesh_module_stress_servo.h:59, from /<>/liggghts-3.8.0+repack1/src/mesh_module_stress_servo.cpp:50: /<>/liggghts-3.8.0+repack1/src/domain_definitions.h:60: note: this is the location of the previous definition #define BIG 1.0e20 In file included from /<>/liggghts-3.8.0+repack1/src/pair_gran_base.h:63, from /<>/liggghts-3.8.0+repack1/src/granular_styles.h:81, from /<>/liggghts-3.8.0+repack1/src/lammps.cpp:87: /<>/liggghts-3.8.0+repack1/src/os_specific.h: In function ‘T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::SurfacesIntersectData]’: /<>/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of ‘int posix_memalign(void**, size_t, size_t)’, declared with attribute warn_unused_result [-Wunused-result] posix_memalign(&ptr, alignment, sizeof(T)); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/os_specific.h: In function ‘T* aligned_malloc(size_t) [with T = LIGGGHTS::ContactModels::ForceData]’: /<>/liggghts-3.8.0+repack1/src/os_specific.h:80:17: warning: ignoring return value of ‘int posix_memalign(void**, size_t, size_t)’, declared with attribute warn_unused_result [-Wunused-result] [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/mesh_mover_linear.cpp.o -c /<>/liggghts-3.8.0+repack1/src/mesh_mover_linear.cpp [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/mesh_mover_rotation.cpp.o -c /<>/liggghts-3.8.0+repack1/src/mesh_mover_rotation.cpp [ 73%] Building CXX object src/CMakeFiles/libliggghts.dir/min.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/min.cpp.o -c /<>/liggghts-3.8.0+repack1/src/min.cpp [ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/min_cg.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/min_cg.cpp.o -c /<>/liggghts-3.8.0+repack1/src/min_cg.cpp [ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/min_linesearch.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/min_linesearch.cpp.o -c /<>/liggghts-3.8.0+repack1/src/min_linesearch.cpp [ 74%] Building CXX object src/CMakeFiles/libliggghts.dir/minimize.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/minimize.cpp.o -c /<>/liggghts-3.8.0+repack1/src/minimize.cpp [ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modified_andrew.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/modified_andrew.cpp.o -c /<>/liggghts-3.8.0+repack1/src/modified_andrew.cpp [ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modify.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/modify.cpp.o -c /<>/liggghts-3.8.0+repack1/src/modify.cpp [ 75%] Building CXX object src/CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/modify_liggghts.cpp.o -c /<>/liggghts-3.8.0+repack1/src/modify_liggghts.cpp In file included from /usr/include/c++/8/vector:69, from /<>/liggghts-3.8.0+repack1/src/modified_andrew.h:45, from /<>/liggghts-3.8.0+repack1/src/modified_andrew.cpp:42: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const MODIFIED_ANDREW_AUX::Point&}; _Tp = MODIFIED_ANDREW_AUX::Point; _Alloc = std::allocator]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from /<>/liggghts-3.8.0+repack1/src/modified_andrew.h:45, from /<>/liggghts-3.8.0+repack1/src/modified_andrew.cpp:42: /usr/include/c++/8/bits/stl_vector.h: In member function ‘void LAMMPS_NS::ModifiedAndrew::add_contact(MODIFIED_ANDREW_AUX::Circle)’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function ‘std::vector LAMMPS_NS::ModifiedAndrew::construct_hull_c_all(double*, int)’: /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/liggghts-3.8.0+repack1/src/modified_andrew.cpp:48: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __unguarded_linear_insert(_RandomAccessIterator __last, ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from /<>/liggghts-3.8.0+repack1/src/modified_andrew.cpp:48: /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = MODIFIED_ANDREW_AUX::Point; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from /<>/liggghts-3.8.0+repack1/src/modified_andrew.cpp:48: /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __heap_select(_RandomAccessIterator __first, ^~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1668:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1933:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__heap_select(__first, __middle, __last, __comp); ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function ‘std::vector LAMMPS_NS::ModifiedAndrew::convex_hull(std::vector)’: /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/multisphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/multisphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/multisphere.cpp /<>/liggghts-3.8.0+repack1/src/modify.cpp: In member function ‘int LAMMPS_NS::Modify::read_restart(FILE*)’: /<>/liggghts-3.8.0+repack1/src/modify.cpp:1197:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/modify.cpp:1213:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/modify.cpp:1216:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/modify.cpp:1219:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/modify.cpp:1222:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/modify.cpp:1225:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/modify.cpp:1228:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/modify.cpp:1236:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/modify.cpp:1252:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/modify.cpp:1255:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/modify.cpp:1258:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/modify.cpp:1261:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/modify.cpp:1264:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/multisphere_parallel.cpp.o -c /<>/liggghts-3.8.0+repack1/src/multisphere_parallel.cpp [ 76%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_bond.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_bond.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neigh_bond.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_derive.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_derive.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neigh_derive.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_dummy.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neigh_dummy.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_full.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_full.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neigh_full.cpp [ 77%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_gran.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_gran.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neigh_gran.cpp [ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_half_bin.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neigh_half_bin.cpp [ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_half_multi.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neigh_half_multi.cpp [ 78%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_half_nsq.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neigh_half_nsq.cpp [ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_list.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_list.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neigh_list.cpp [ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_request.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_request.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neigh_request.cpp [ 79%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_respa.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_respa.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neigh_respa.cpp [ 80%] Building CXX object src/CMakeFiles/libliggghts.dir/neigh_stencil.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neigh_stencil.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neigh_stencil.cpp [ 80%] Building CXX object src/CMakeFiles/libliggghts.dir/neighbor.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/neighbor.cpp.o -c /<>/liggghts-3.8.0+repack1/src/neighbor.cpp [ 80%] Building CXX object src/CMakeFiles/libliggghts.dir/output.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/output.cpp.o -c /<>/liggghts-3.8.0+repack1/src/output.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair.cpp.o -c /<>/liggghts-3.8.0+repack1/src/pair.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_gran.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_gran.cpp.o -c /<>/liggghts-3.8.0+repack1/src/pair_gran.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_gran_proxy.cpp.o -c /<>/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp [ 81%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_hybrid.cpp.o -c /<>/liggghts-3.8.0+repack1/src/pair_hybrid.cpp /<>/liggghts-3.8.0+repack1/src/pair_gran.cpp: In member function ‘virtual void LAMMPS_NS::PairGran::read_restart(FILE*, int, int)’: /<>/liggghts-3.8.0+repack1/src/pair_gran.cpp:763:25: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/pair_hybrid.cpp: In member function ‘virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*, int, int)’: /<>/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:660:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&nstyles,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:674:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/pair_hybrid.cpp:677:23: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(keywords[m],sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp: In member function ‘virtual void LAMMPS_NS::PairGranProxy::read_restart_settings(FILE*, int, int)’: /<>/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:116:26: warning: format ‘%zd’ expects argument of type ‘signed size_t’, but argument 3 has type ‘int64_t’ {aka ‘long long int’} [-Wformat=] fprintf(screen," original hashcode = %zd \n",selected); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/pair_gran_proxy.cpp:99:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&selected, sizeof(int64_t), 1, fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_hybrid_overlay.cpp.o -c /<>/liggghts-3.8.0+repack1/src/pair_hybrid_overlay.cpp [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_line_lj.cpp.o -c /<>/liggghts-3.8.0+repack1/src/pair_line_lj.cpp [ 82%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_soft.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_soft.cpp.o -c /<>/liggghts-3.8.0+repack1/src/pair_soft.cpp [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_sph.cpp.o -c /<>/liggghts-3.8.0+repack1/src/pair_sph.cpp [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/pair_sph_artvisc_tenscorr.cpp.o -c /<>/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp /<>/liggghts-3.8.0+repack1/src/pair_soft.cpp: In member function ‘virtual void LAMMPS_NS::PairSoft::read_restart(FILE*, int, int)’: /<>/liggghts-3.8.0+repack1/src/pair_soft.cpp:282:25: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/pair_soft.cpp:286:16: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&prefactor[i][j],sizeof(double),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/pair_soft.cpp:287:16: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut[i][j],sizeof(double),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/pair_soft.cpp: In member function ‘virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*, int, int)’: /<>/liggghts-3.8.0+repack1/src/pair_soft.cpp:312:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&cut_global,sizeof(double),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/pair_soft.cpp:313:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&mix_flag,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function ‘virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart(FILE*, int, int)’: /<>/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:300:25: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp: In member function ‘virtual void LAMMPS_NS::PairSphArtviscTenscorr::read_restart_settings(FILE*, int, int)’: /<>/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:322:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&artVisc_flag,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/pair_sph_artvisc_tenscorr.cpp:323:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&tensCorr_flag,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 83%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/particleToInsert.cpp.o -c /<>/liggghts-3.8.0+repack1/src/particleToInsert.cpp [ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/particleToInsertSuperquadric.cpp.o -c /<>/liggghts-3.8.0+repack1/src/particleToInsertSuperquadric.cpp [ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/particleToInsert_multisphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/particleToInsert_multisphere.cpp [ 84%] Building CXX object src/CMakeFiles/libliggghts.dir/procmap.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/procmap.cpp.o -c /<>/liggghts-3.8.0+repack1/src/procmap.cpp In file included from /usr/include/c++/8/vector:69, from /<>/liggghts-3.8.0+repack1/src/region_neighbor_list_definitions.h:49, from /<>/liggghts-3.8.0+repack1/src/region_neighbor_list.h:50, from /<>/liggghts-3.8.0+repack1/src/particleToInsert.h:48, from /<>/liggghts-3.8.0+repack1/src/particleToInsert.cpp:42: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {LAMMPS_NS::Particle}; _Tp = LAMMPS_NS::Particle; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void LAMMPS_NS::RegionNeighborList::insert(double*, double, int) [with bool INTERPOLATE = false]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/liggghts-3.8.0+repack1/src/region_neighbor_list_definitions.h:49, from /<>/liggghts-3.8.0+repack1/src/region_neighbor_list.h:50, from /<>/liggghts-3.8.0+repack1/src/particleToInsert.h:48, from /<>/liggghts-3.8.0+repack1/src/particleToInsert_multisphere.h:45, from /<>/liggghts-3.8.0+repack1/src/particleToInsert_multisphere.cpp:42: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {LAMMPS_NS::Particle}; _Tp = LAMMPS_NS::Particle; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘virtual int LAMMPS_NS::ParticleToInsertMultisphere::check_near_set_x_v_omega(double*, double*, double*, double*, LAMMPS_NS::RegionNeighborList&)’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/properties.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/properties.cpp.o -c /<>/liggghts-3.8.0+repack1/src/properties.cpp [ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/property_registry.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/property_registry.cpp.o -c /<>/liggghts-3.8.0+repack1/src/property_registry.cpp [ 85%] Building CXX object src/CMakeFiles/libliggghts.dir/random.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/random.cpp.o -c /<>/liggghts-3.8.0+repack1/src/random.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/random_mars.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/random_mars.cpp.o -c /<>/liggghts-3.8.0+repack1/src/random_mars.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/random_park.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/random_park.cpp.o -c /<>/liggghts-3.8.0+repack1/src/random_park.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/read_data.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/read_data.cpp.o -c /<>/liggghts-3.8.0+repack1/src/read_data.cpp [ 86%] Building CXX object src/CMakeFiles/libliggghts.dir/read_dump.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/read_dump.cpp.o -c /<>/liggghts-3.8.0+repack1/src/read_dump.cpp [ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/read_restart.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/read_restart.cpp.o -c /<>/liggghts-3.8.0+repack1/src/read_restart.cpp [ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/reader.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/reader.cpp.o -c /<>/liggghts-3.8.0+repack1/src/reader.cpp [ 87%] Building CXX object src/CMakeFiles/libliggghts.dir/reader_native.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/reader_native.cpp.o -c /<>/liggghts-3.8.0+repack1/src/reader_native.cpp /<>/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function ‘void LAMMPS_NS::ReadRestart::nread_int(int*, int, FILE*)’: /<>/liggghts-3.8.0+repack1/src/read_restart.cpp:863:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(buf,sizeof(int),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function ‘void LAMMPS_NS::ReadRestart::nread_double(double*, int, FILE*)’: /<>/liggghts-3.8.0+repack1/src/read_restart.cpp:874:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(buf,sizeof(double),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function ‘void LAMMPS_NS::ReadRestart::nread_char(char*, int, FILE*)’: /<>/liggghts-3.8.0+repack1/src/read_restart.cpp:885:8: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(buf,sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function ‘int LAMMPS_NS::ReadRestart::read_int()’: /<>/liggghts-3.8.0+repack1/src/read_restart.cpp:896:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&value,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function ‘double LAMMPS_NS::ReadRestart::read_double()’: /<>/liggghts-3.8.0+repack1/src/read_restart.cpp:911:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&value,sizeof(double),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function ‘char* LAMMPS_NS::ReadRestart::read_char()’: /<>/liggghts-3.8.0+repack1/src/read_restart.cpp:927:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&n,sizeof(int),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/read_restart.cpp:933:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(value,sizeof(char),n,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/read_restart.cpp: In member function ‘LAMMPS_NS::bigint LAMMPS_NS::ReadRestart::read_bigint()’: /<>/liggghts-3.8.0+repack1/src/read_restart.cpp:948:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fread(&value,sizeof(bigint),1,fp); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/reader_xyz.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/reader_xyz.cpp.o -c /<>/liggghts-3.8.0+repack1/src/reader_xyz.cpp [ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/region.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region.cpp.o -c /<>/liggghts-3.8.0+repack1/src/region.cpp [ 88%] Building CXX object src/CMakeFiles/libliggghts.dir/region_block.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_block.cpp.o -c /<>/liggghts-3.8.0+repack1/src/region_block.cpp [ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_cone.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_cone.cpp.o -c /<>/liggghts-3.8.0+repack1/src/region_cone.cpp [ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_cylinder.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_cylinder.cpp.o -c /<>/liggghts-3.8.0+repack1/src/region_cylinder.cpp [ 89%] Building CXX object src/CMakeFiles/libliggghts.dir/region_intersect.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_intersect.cpp.o -c /<>/liggghts-3.8.0+repack1/src/region_intersect.cpp [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_mesh_tet.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_mesh_tet.cpp.o -c /<>/liggghts-3.8.0+repack1/src/region_mesh_tet.cpp [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_neighbor_list.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_neighbor_list.cpp.o -c /<>/liggghts-3.8.0+repack1/src/region_neighbor_list.cpp [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_plane.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_plane.cpp.o -c /<>/liggghts-3.8.0+repack1/src/region_plane.cpp [ 90%] Building CXX object src/CMakeFiles/libliggghts.dir/region_prism.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_prism.cpp.o -c /<>/liggghts-3.8.0+repack1/src/region_prism.cpp [ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_sphere.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_sphere.cpp.o -c /<>/liggghts-3.8.0+repack1/src/region_sphere.cpp [ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_union.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_union.cpp.o -c /<>/liggghts-3.8.0+repack1/src/region_union.cpp In file included from /usr/include/c++/8/vector:69, from /<>/liggghts-3.8.0+repack1/src/region_neighbor_list_definitions.h:49, from /<>/liggghts-3.8.0+repack1/src/region_neighbor_list.h:50, from /<>/liggghts-3.8.0+repack1/src/region_mesh_tet.h:53, from /<>/liggghts-3.8.0+repack1/src/region_mesh_tet.cpp:46: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {LAMMPS_NS::Particle}; _Tp = LAMMPS_NS::Particle; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void LAMMPS_NS::RegTetMesh::build_neighs()’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/CMakeFiles/libliggghts.dir/region_wedge.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/region_wedge.cpp.o -c /<>/liggghts-3.8.0+repack1/src/region_wedge.cpp [ 92%] Building CXX object src/CMakeFiles/libliggghts.dir/replicate.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/replicate.cpp.o -c /<>/liggghts-3.8.0+repack1/src/replicate.cpp [ 92%] Building CXX object src/CMakeFiles/libliggghts.dir/respa.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/respa.cpp.o -c /<>/liggghts-3.8.0+repack1/src/respa.cpp [ 92%] Building CXX object src/CMakeFiles/libliggghts.dir/rotate.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/rotate.cpp.o -c /<>/liggghts-3.8.0+repack1/src/rotate.cpp [ 93%] Building CXX object src/CMakeFiles/libliggghts.dir/run.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/run.cpp.o -c /<>/liggghts-3.8.0+repack1/src/run.cpp [ 93%] Building CXX object src/CMakeFiles/libliggghts.dir/run_time.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/run_time.cpp.o -c /<>/liggghts-3.8.0+repack1/src/run_time.cpp [ 93%] Building CXX object src/CMakeFiles/libliggghts.dir/set.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/set.cpp.o -c /<>/liggghts-3.8.0+repack1/src/set.cpp [ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/signal_handling.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/signal_handling.cpp.o -c /<>/liggghts-3.8.0+repack1/src/signal_handling.cpp /<>/liggghts-3.8.0+repack1/src/signal_handling.cpp: In function ‘void LAMMPS_NS::SignalHandler::int_handler(int)’: /<>/liggghts-3.8.0+repack1/src/signal_handling.cpp:65:18: warning: ignoring return value of ‘ssize_t write(int, const void*, size_t)’, declared with attribute warn_unused_result [-Wunused-result] write(STDOUT_FILENO, warning.c_str(), len); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/signal_handling.cpp:72:14: warning: ignoring return value of ‘ssize_t write(int, const void*, size_t)’, declared with attribute warn_unused_result [-Wunused-result] write(STDERR_FILENO, error.c_str(), len); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/signal_handling.cpp:89:14: warning: ignoring return value of ‘ssize_t write(int, const void*, size_t)’, declared with attribute warn_unused_result [-Wunused-result] write(STDOUT_FILENO, warning.c_str(), len); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/liggghts-3.8.0+repack1/src/signal_handling.cpp: In function ‘void LAMMPS_NS::SignalHandler::usr1_handler(int)’: /<>/liggghts-3.8.0+repack1/src/signal_handling.cpp:108:10: warning: ignoring return value of ‘ssize_t write(int, const void*, size_t)’, declared with attribute warn_unused_result [-Wunused-result] write(STDOUT_FILENO, warning.c_str(), len); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/sort_buffer.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/sort_buffer.cpp.o -c /<>/liggghts-3.8.0+repack1/src/sort_buffer.cpp [ 94%] Building CXX object src/CMakeFiles/libliggghts.dir/special.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/special.cpp.o -c /<>/liggghts-3.8.0+repack1/src/special.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/superquadric.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/superquadric.cpp.o -c /<>/liggghts-3.8.0+repack1/src/superquadric.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/tet_mesh.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/tet_mesh.cpp.o -c /<>/liggghts-3.8.0+repack1/src/tet_mesh.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/thermo.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/thermo.cpp.o -c /<>/liggghts-3.8.0+repack1/src/thermo.cpp [ 95%] Building CXX object src/CMakeFiles/libliggghts.dir/timer.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/timer.cpp.o -c /<>/liggghts-3.8.0+repack1/src/timer.cpp [ 96%] Building CXX object src/CMakeFiles/libliggghts.dir/tri_mesh.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/tri_mesh.cpp.o -c /<>/liggghts-3.8.0+repack1/src/tri_mesh.cpp [ 96%] Building CXX object src/CMakeFiles/libliggghts.dir/tri_mesh_planar.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/tri_mesh_planar.cpp.o -c /<>/liggghts-3.8.0+repack1/src/tri_mesh_planar.cpp [ 96%] Building CXX object src/CMakeFiles/libliggghts.dir/universe.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/universe.cpp.o -c /<>/liggghts-3.8.0+repack1/src/universe.cpp In file included from /usr/include/c++/8/vector:69, from /<>/liggghts-3.8.0+repack1/src/comm.h:56, from /<>/liggghts-3.8.0+repack1/src/domain.h:58, from /<>/liggghts-3.8.0+repack1/src/multi_node_mesh.h:48, from /<>/liggghts-3.8.0+repack1/src/multi_node_mesh_parallel.h:46, from /<>/liggghts-3.8.0+repack1/src/tracking_mesh.h:51, from /<>/liggghts-3.8.0+repack1/src/surface_mesh.h:47, from /<>/liggghts-3.8.0+repack1/src/tri_mesh.h:47, from /<>/liggghts-3.8.0+repack1/src/tri_mesh_planar.h:45, from /<>/liggghts-3.8.0+repack1/src/tri_mesh_planar.cpp:42: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {LAMMPS_NS::Particle}; _Tp = LAMMPS_NS::Particle; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void LAMMPS_NS::RegionNeighborList::insert(double*, double, int) [with bool INTERPOLATE = false]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from /<>/liggghts-3.8.0+repack1/src/comm.h:56, from /<>/liggghts-3.8.0+repack1/src/domain.h:58, from /<>/liggghts-3.8.0+repack1/src/multi_node_mesh.h:48, from /<>/liggghts-3.8.0+repack1/src/multi_node_mesh_parallel.h:46, from /<>/liggghts-3.8.0+repack1/src/tracking_mesh.h:51, from /<>/liggghts-3.8.0+repack1/src/surface_mesh.h:47, from /<>/liggghts-3.8.0+repack1/src/tri_mesh.h:47, from /<>/liggghts-3.8.0+repack1/src/tri_mesh.cpp:42: /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {LAMMPS_NS::Particle}; _Tp = LAMMPS_NS::Particle; _Alloc = std::allocator >]’: /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator*, std::vector > >’} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function ‘void LAMMPS_NS::RegionNeighborList::insert(double*, double, int) [with bool INTERPOLATE = false]’: /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ [ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/update.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/update.cpp.o -c /<>/liggghts-3.8.0+repack1/src/update.cpp [ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/variable.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/variable.cpp.o -c /<>/liggghts-3.8.0+repack1/src/variable.cpp [ 97%] Building CXX object src/CMakeFiles/libliggghts.dir/velocity.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/velocity.cpp.o -c /<>/liggghts-3.8.0+repack1/src/velocity.cpp /<>/liggghts-3.8.0+repack1/src/variable.cpp: In member function ‘int LAMMPS_NS::Variable::next(int, char**)’: /<>/liggghts-3.8.0+repack1/src/variable.cpp:534:13: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] fscanf(fp,"%d",&nextindex); ~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 98%] Building CXX object src/CMakeFiles/libliggghts.dir/verlet.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/verlet.cpp.o -c /<>/liggghts-3.8.0+repack1/src/verlet.cpp [ 98%] Building CXX object src/CMakeFiles/libliggghts.dir/write_data.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/write_data.cpp.o -c /<>/liggghts-3.8.0+repack1/src/write_data.cpp [ 98%] Building CXX object src/CMakeFiles/libliggghts.dir/write_dump.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/write_dump.cpp.o -c 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/usr/lib/arm-linux-gnueabihf/libvtkIOParallelXML-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOMPIParallel-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOParallel-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOImage-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkDICOMParser-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkmetaio-6.3.so.6.3.0 -lz /usr/lib/arm-linux-gnueabihf/libvtkIOXML-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOGeometry-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOXMLParser-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersParallel-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkRenderingCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonColor-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersExtraction-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersStatistics-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkImagingFourier-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkImagingCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkalglib-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersGeometry-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersModeling-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersSources-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersGeneral-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonComputationalGeometry-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIONetCDF-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/hdf5/openmpi/libhdf5.so -lsz -ldl -lm /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so /usr/lib/arm-linux-gnueabihf/libvtkexoIIc-6.3.so.6.3.0 -lnetcdf_c++ -lnetcdf -ljsoncpp /usr/lib/arm-linux-gnueabihf/libvtkParallelMPI-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkParallelCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOLegacy-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonExecutionModel-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonDataModel-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonMisc-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonSystem-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtksys-6.3.so.6.3.0 -ldl /usr/lib/arm-linux-gnueabihf/libvtkCommonTransforms-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonMath-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonCore-6.3.so.6.3.0 make[3]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' [100%] Built target liggghts make[2]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -E cmake_progress_start /<>/liggghts-3.8.0+repack1/debian/build/CMakeFiles 0 make[1]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' debian/rules override_dh_auto_test make[1]: Entering directory '/<>/liggghts-3.8.0+repack1' mkdir test cp -r examples/LIGGGHTS/Tutorials_public/heatTransfer_1/* test/ cd test; mpirun -np 2 --allow-run-as-root --oversubscribe /<>/liggghts-3.8.0+repack1/debian/build/src/liggghts < in.heatGran -------------------------------------------------------------------------- [[45054,1],1]: A high-performance Open MPI point-to-point messaging module was unable to find any relevant network interfaces: Module: OpenFabrics (openib) Host: bos02-arm64-013 Another transport will be used instead, although this may result in lower performance. NOTE: You can disable this warning by setting the MCA parameter btl_base_warn_component_unused to 0. -------------------------------------------------------------------------- LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2019-01-23-06:01:10 by buildd, git commit unknown) Created orthogonal box = (-0.05 -0.05 0) to (0.05 0.05 0.15) 1 by 1 by 2 MPI processor grid Fix particledistribution/discrete (id pdd1): distribution based on mass%: pts1: d=8.000000e-03 (max. bounding sphere) mass%=100.000000% Fix particledistribution/discrete (id pdd1): distribution based on number%: pts1: d=8.000000e-03 (max. bounding sphere) number%=100.000000% Setting up run at Wed Jan 23 06:10:21 2019 INFO: Resetting random generator for region bc INFO: Particle insertion ins: inserting every 0 steps Memory usage per processor = 4.29637 Mbytes Step Atoms KinEng rke heattran Volume 0 0 0 0 0 0.0015 insertion: proc 0 at 0 % insertion: proc 1 at 0 % insertion: proc 1 at 10 % insertion: proc 0 at 10 % insertion: proc 1 at 20 % insertion: proc 0 at 20 % insertion: proc 1 at 30 % insertion: proc 0 at 30 % insertion: proc 1 at 40 % insertion: proc 0 at 40 % insertion: proc 1 at 50 % insertion: proc 0 at 50 % insertion: proc 1 at 60 % insertion: proc 0 at 60 % insertion: proc 1 at 70 % insertion: proc 0 at 70 % insertion: proc 1 at 80 % insertion: proc 0 at 80 % insertion: proc 1 at 90 % insertion: proc 0 at 90 % insertion: proc 1 at 100 % insertion: proc 0 at 100 % INFO: Particle insertion ins: inserted 889 particle templates (mass 1.906603e+00) at step 1 - a total of 889 particle templates (mass 1.906603e+00) inserted so far. 1 889 0.0858673 0 5719.8098 0.0015 Loop time of 0.0433842 on 2 procs for 1 steps with 889 atoms, finish time Wed Jan 23 06:10:21 2019 Pair time (%) = 4.1804e-05 (0.0963576) Neigh time (%) = 0.00083927 (1.93451) Comm time (%) = 0.000196538 (0.453016) Outpt time (%) = 8.5358e-05 (0.196749) Other time (%) = 0.0422212 (97.3194) Nlocal: 444.5 ave 446 max 443 min Histogram: 1 0 0 0 0 0 0 0 0 1 Nghost: 53.5 ave 55 max 52 min Histogram: 1 0 0 0 0 0 0 0 0 1 Neighs: 677.5 ave 692 max 663 min Histogram: 1 0 0 0 0 0 0 0 0 1 Total # of neighbors = 1355 Ave neighs/atom = 1.52418 Neighbor list builds = 1 Dangerous builds = 0 Setting up run at Wed Jan 23 06:10:21 2019 Memory usage per processor = 8.00555 Mbytes Step Atoms KinEng rke heattran Volume 1 889 0.0858673 0 5719.8098 0.0015 1000 889 0.24513315 0.00028749395 5719.8098 0.0015 2000 889 0.41448052 0.0011292267 5719.8098 0.0015 3000 889 0.499185 0.0020564748 5719.8098 0.0015 4000 889 0.31640464 0.0039072055 5719.8098 0.0015 5000 889 0.025728568 0.0031537134 5719.8098 0.0015 [bos02-arm64-013:29149] 1 more process has sent help message help-mpi-btl-base.txt / btl:no-nics [bos02-arm64-013:29149] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages 6000 889 0.0066287838 0.0017750363 5719.8098 0.0015 7000 889 0.0056666661 0.0011144246 5719.8098 0.0015 8000 889 0.0035001128 0.00068883305 5719.8098 0.0015 9000 889 0.001874252 0.00041791814 5719.8098 0.0015 10000 889 0.0011194605 0.00026336617 5719.8098 0.0015 11000 889 0.00028190569 0.00014289112 5719.8098 0.0015 12000 889 0.00021361459 8.3137013e-05 5719.8098 0.0015 13000 889 0.00010832404 4.2427322e-05 5719.8098 0.0015 14000 889 6.9512993e-05 2.3729214e-05 5719.8098 0.0015 15000 889 2.7899973e-05 1.146997e-05 5719.8098 0.0015 16000 889 7.2323469e-05 1.5151257e-05 5719.8098 0.0015 17000 889 3.2147222e-05 1.2263866e-05 5719.8098 0.0015 18000 889 1.9134527e-05 9.6788056e-06 5719.8098 0.0015 19000 889 4.4217855e-06 3.7107113e-06 5719.8098 0.0015 20000 889 2.3496863e-06 2.5381488e-06 5719.8098 0.0015 Loop time of 33.5099 on 2 procs for 19999 steps with 889 atoms, finish time Wed Jan 23 06:10:55 2019 Pair time (%) = 10.5393 (31.4514) Neigh time (%) = 0.159702 (0.476583) Comm time (%) = 2.92295 (8.72266) Outpt time (%) = 0.295819 (0.882781) Other time (%) = 19.5921 (58.4666) Nlocal: 444.5 ave 889 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 Nghost: 0 ave 0 max 0 min Histogram: 2 0 0 0 0 0 0 0 0 0 Neighs: 2066.5 ave 4133 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 Total # of neighbors = 4133 Ave neighs/atom = 4.64904 Neighbor list builds = 184 Dangerous builds = 0 Setting atom values ... 440 settings made for property/atom Setting up run at Wed Jan 23 06:10:55 2019 Memory usage per processor = 8.30253 Mbytes Step Atoms KinEng rke heattran Volume 20000 889 2.3496863e-06 2.5381488e-06 10438.063 0.0015 21000 889 1.0436132e-06 1.5046063e-06 10438.063 0.0015 22000 889 7.4104702e-07 5.7218783e-07 10438.063 0.0015 23000 889 7.3927769e-07 4.6257436e-07 10438.063 0.0015 24000 889 9.4235914e-07 7.5388085e-07 10438.063 0.0015 25000 889 3.7081363e-06 1.7709857e-06 10438.063 0.0015 26000 889 3.9511941e-06 1.4323564e-06 10438.063 0.0015 27000 889 2.3998039e-07 1.3860278e-07 10438.063 0.0015 28000 889 4.0284459e-08 3.3788398e-08 10438.063 0.0015 29000 889 2.1089594e-08 2.6144051e-08 10438.063 0.0015 30000 889 1.4146237e-08 2.4905017e-08 10438.063 0.0015 31000 889 9.6351465e-09 2.4174491e-08 10438.063 0.0015 32000 889 7.9202469e-09 2.3934581e-08 10438.063 0.0015 33000 889 7.9549599e-09 2.3850282e-08 10438.063 0.0015 34000 889 8.2645169e-09 2.3762126e-08 10438.063 0.0015 35000 889 6.0680201e-09 1.8482029e-08 10438.063 0.0015 36000 889 5.7083658e-09 1.8444568e-08 10438.063 0.0015 37000 889 5.17788e-09 1.8387992e-08 10438.063 0.0015 38000 889 4.7690407e-09 1.8377249e-08 10438.063 0.0015 39000 889 4.4446861e-09 1.8351042e-08 10438.063 0.0015 40000 889 4.2439403e-09 1.8307304e-08 10438.063 0.0015 41000 889 4.1561155e-09 1.8271947e-08 10438.063 0.0015 42000 889 4.254111e-09 1.8281401e-08 10438.063 0.0015 43000 889 4.291908e-09 1.8271443e-08 10438.063 0.0015 44000 889 4.2795268e-09 1.8270757e-08 10438.063 0.0015 45000 889 4.2053977e-09 1.8262942e-08 10438.063 0.0015 46000 889 4.136915e-09 1.8259562e-08 10438.063 0.0015 47000 889 4.102735e-09 1.825755e-08 10438.063 0.0015 48000 889 4.1028794e-09 1.8257014e-08 10438.063 0.0015 49000 889 4.1101685e-09 1.8256258e-08 10438.063 0.0015 50000 889 2.8053107e-09 1.4643392e-08 10438.063 0.0015 Loop time of 61.0384 on 2 procs for 30000 steps with 889 atoms, finish time Wed Jan 23 06:11:56 2019 Pair time (%) = 19.6172 (32.139) Neigh time (%) = 0.00189692 (0.00310775) Comm time (%) = 0.112379 (0.184112) Outpt time (%) = 0.476245 (0.780238) Other time (%) = 40.8308 (66.8935) Nlocal: 444.5 ave 889 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 Nghost: 0 ave 0 max 0 min Histogram: 2 0 0 0 0 0 0 0 0 0 Neighs: 2066.5 ave 4133 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 1 Total # of neighbors = 4133 Ave neighs/atom = 4.64904 Neighbor list builds = 2 Dangerous builds = 0 rm -rf test make[1]: Leaving directory '/<>/liggghts-3.8.0+repack1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --buildsystem=cmake --builddirectory=/<>/liggghts-3.8.0+repack1/debian/build dh_testroot -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_prep -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_auto_install -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build cd debian/build && make -j4 install DESTDIR=/<>/liggghts-3.8.0\+repack1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -S/<>/liggghts-3.8.0+repack1 -B/<>/liggghts-3.8.0+repack1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/liggghts-3.8.0+repack1/debian/build/CMakeFiles /<>/liggghts-3.8.0+repack1/debian/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/GenerateHeaders.dir/build.make src/CMakeFiles/GenerateHeaders.dir/depend make[3]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' cd /<>/liggghts-3.8.0+repack1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/liggghts-3.8.0+repack1 /<>/liggghts-3.8.0+repack1/src /<>/liggghts-3.8.0+repack1/debian/build /<>/liggghts-3.8.0+repack1/debian/build/src /<>/liggghts-3.8.0+repack1/debian/build/src/CMakeFiles/GenerateHeaders.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/GenerateHeaders.dir/build.make src/CMakeFiles/GenerateHeaders.dir/build make[3]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' cd /<>/liggghts-3.8.0+repack1/src && sh Make.sh style cd /<>/liggghts-3.8.0+repack1/src && sh Make.sh models Creating list of contact models completed. make[3]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' [ 0%] Built target GenerateHeaders make -f src/CMakeFiles/libliggghts.dir/build.make src/CMakeFiles/libliggghts.dir/depend make[3]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' cd /<>/liggghts-3.8.0+repack1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/liggghts-3.8.0+repack1 /<>/liggghts-3.8.0+repack1/src /<>/liggghts-3.8.0+repack1/debian/build /<>/liggghts-3.8.0+repack1/debian/build/src /<>/liggghts-3.8.0+repack1/debian/build/src/CMakeFiles/libliggghts.dir/DependInfo.cmake --color= Scanning dependencies of target libliggghts make[3]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/libliggghts.dir/build.make src/CMakeFiles/libliggghts.dir/build make[3]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' [ 0%] Building CXX object src/CMakeFiles/libliggghts.dir/universe.cpp.o cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/mpicxx -Dlibliggghts_EXPORTS -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/jsoncpp -I/usr/include/eigen3 -I/<>/liggghts-3.8.0+repack1 -I/<>/liggghts-3.8.0+repack1/src -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -fPIC -o CMakeFiles/libliggghts.dir/universe.cpp.o -c /<>/liggghts-3.8.0+repack1/src/universe.cpp [ 0%] Linking CXX shared library libliggghts.so cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/libliggghts.dir/link.txt --verbose=1 /usr/bin/mpicxx -fPIC -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libliggghts.so.3 -o libliggghts.so.3.8.0 CMakeFiles/libliggghts.dir/angle.cpp.o CMakeFiles/libliggghts.dir/angle_hybrid.cpp.o CMakeFiles/libliggghts.dir/atom.cpp.o CMakeFiles/libliggghts.dir/atom_map.cpp.o CMakeFiles/libliggghts.dir/atom_vec.cpp.o CMakeFiles/libliggghts.dir/atom_vec_atomic.cpp.o CMakeFiles/libliggghts.dir/atom_vec_charge.cpp.o CMakeFiles/libliggghts.dir/atom_vec_ellipsoid.cpp.o CMakeFiles/libliggghts.dir/atom_vec_full.cpp.o CMakeFiles/libliggghts.dir/atom_vec_hybrid.cpp.o CMakeFiles/libliggghts.dir/atom_vec_line.cpp.o CMakeFiles/libliggghts.dir/atom_vec_molecular.cpp.o CMakeFiles/libliggghts.dir/atom_vec_sph.cpp.o CMakeFiles/libliggghts.dir/atom_vec_sph_var.cpp.o CMakeFiles/libliggghts.dir/atom_vec_sphere.cpp.o CMakeFiles/libliggghts.dir/atom_vec_sphere_w.cpp.o CMakeFiles/libliggghts.dir/atom_vec_superquadric.cpp.o CMakeFiles/libliggghts.dir/atom_vec_tri.cpp.o 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/usr/lib/arm-linux-gnueabihf/libvtkIOXML-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOGeometry-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOXMLParser-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkRenderingCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonColor-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersExtraction-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersStatistics-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkImagingFourier-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkImagingCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkalglib-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersGeometry-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersModeling-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersSources-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersGeneral-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonComputationalGeometry-6.3.so.6.3.0 -lnetcdf_c++ -lnetcdf /usr/lib/arm-linux-gnueabihf/libvtkParallelCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOLegacy-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonExecutionModel-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonDataModel-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonMisc-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonSystem-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtksys-6.3.so.6.3.0 -ldl /usr/lib/arm-linux-gnueabihf/libvtkCommonTransforms-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonMath-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonCore-6.3.so.6.3.0 cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/cmake -E cmake_symlink_library libliggghts.so.3.8.0 libliggghts.so.3 libliggghts.so make[3]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' [ 99%] Built target libliggghts make -f src/CMakeFiles/liggghts.dir/build.make src/CMakeFiles/liggghts.dir/depend make[3]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' cd /<>/liggghts-3.8.0+repack1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/liggghts-3.8.0+repack1 /<>/liggghts-3.8.0+repack1/src /<>/liggghts-3.8.0+repack1/debian/build /<>/liggghts-3.8.0+repack1/debian/build/src /<>/liggghts-3.8.0+repack1/debian/build/src/CMakeFiles/liggghts.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' make -f src/CMakeFiles/liggghts.dir/build.make src/CMakeFiles/liggghts.dir/build make[3]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' [100%] Linking CXX executable liggghts cd /<>/liggghts-3.8.0+repack1/debian/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/liggghts.dir/link.txt --verbose=1 /usr/bin/mpicxx -g -O2 -fdebug-prefix-map=/<>/liggghts-3.8.0+repack1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DLAMMPS_VTK6 -DLAMMPS_VTK -std=c++0x -DLAMMPS_JPEG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/liggghts.dir/main.cpp.o -o liggghts -Wl,-rpath,/<>/liggghts-3.8.0+repack1/debian/build/src:/usr/lib/arm-linux-gnueabihf/hdf5/openmpi:/usr/lib/arm-linux-gnueabihf/openmpi/lib: libliggghts.so.3.8.0 -lboost_mpi -lboost_serialization -ljpeg /usr/lib/arm-linux-gnueabihf/libvtkChartsCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkInfovisCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkViewsContext2D-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkRenderingContext2D-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkViewsCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkInteractionWidgets-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersHybrid-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkImagingGeneral-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkImagingSources-6.3.so.6.3.0 -lpng -ltiff /usr/lib/arm-linux-gnueabihf/libvtkInteractionStyle-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkRenderingAnnotation-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkRenderingFreeType-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkftgl-6.3.so.6.3.0 -lfreetype /usr/lib/arm-linux-gnueabihf/libvtkImagingColor-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkRenderingVolume-6.3.so.6.3.0 -lexpat /usr/lib/arm-linux-gnueabihf/libvtkRenderingOpenGL-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkImagingHybrid-6.3.so.6.3.0 -lGL -lGLU -lSM -lICE -lX11 -lXext -lXt /usr/lib/arm-linux-gnueabihf/libvtkIOParallelXML-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOMPIParallel-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOParallel-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOImage-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkDICOMParser-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkmetaio-6.3.so.6.3.0 -lz /usr/lib/arm-linux-gnueabihf/libvtkIOXML-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOGeometry-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOXMLParser-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersParallel-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkRenderingCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonColor-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersExtraction-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersStatistics-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkImagingFourier-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkImagingCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkalglib-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersGeometry-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersModeling-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersSources-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersGeneral-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkFiltersCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonComputationalGeometry-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIONetCDF-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/hdf5/openmpi/libhdf5.so -lsz -ldl -lm /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so /usr/lib/arm-linux-gnueabihf/libvtkexoIIc-6.3.so.6.3.0 -lnetcdf_c++ -lnetcdf -ljsoncpp /usr/lib/arm-linux-gnueabihf/libvtkParallelMPI-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkParallelCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOLegacy-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkIOCore-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonExecutionModel-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonDataModel-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonMisc-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonSystem-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtksys-6.3.so.6.3.0 -ldl /usr/lib/arm-linux-gnueabihf/libvtkCommonTransforms-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonMath-6.3.so.6.3.0 /usr/lib/arm-linux-gnueabihf/libvtkCommonCore-6.3.so.6.3.0 make[3]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' [100%] Built target liggghts make[2]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' /usr/bin/cmake -E cmake_progress_start /<>/liggghts-3.8.0+repack1/debian/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/liggghts-3.8.0+repack1/debian/build' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/lib/arm-linux-gnueabihf/libliggghts.so.3.8.0 -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/lib/arm-linux-gnueabihf/libliggghts.so.3 -- Set runtime path of "/<>/liggghts-3.8.0+repack1/debian/tmp/usr/lib/arm-linux-gnueabihf/libliggghts.so.3.8.0" to "" -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/lib/arm-linux-gnueabihf/libliggghts.so -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/bin/liggghts -- Set runtime path of "/<>/liggghts-3.8.0+repack1/debian/tmp/usr/bin/liggghts" to "" -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/abstract_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/accelerator_cuda.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/accelerator_omp.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/angle.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/angle_hybrid.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/associative_pointer_array.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/associative_pointer_array_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_masks.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_atomic.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_charge.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_convexhull.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_ellipsoid.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_full.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_hybrid.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_line.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_molecular.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_sph.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_sph_var.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_sphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_superquadric.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/atom_vec_tri.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/bond.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/bond_harmonic.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/bond_hybrid.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/bounding_box.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cfd_datacoupling.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cfd_datacoupling_file.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cfd_datacoupling_mpi.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cfd_datacoupling_simple.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cfd_regionmodel.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cfd_regionmodel_none.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/change_box.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/citeme.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cohesion_model_base.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cohesion_model_easo_capillary_viscous.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cohesion_model_sjkr.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cohesion_model_sjkr2.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/cohesion_model_washino_capillary_viscous.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/comm.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/comm_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_atom_molecule.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_bond_local.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_centro_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_cluster_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_cna_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_com.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_com_molecule.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_contact_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_contact_atom_gran.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_coord_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_displace_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_erotate.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_erotate_asphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_erotate_multisphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_erotate_sphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_erotate_sphere_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_erotate_superquadric.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_group_group.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_gyration.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_gyration_molecule.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_inertia_molecule.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_ke.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_ke_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_ke_multisphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_msd.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_msd_molecule.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_nparticles_tracer_region.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_pair_gran_local.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_pe.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_pe_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_pressure.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_property_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_property_local.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_property_molecule.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_rdf.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_reduce.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_reduce_region.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_rigid.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_slice.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_stress_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/compute_temp.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/contact_interface.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/contact_model_base.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/contact_model_constants.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/contact_models.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/container.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/container_base.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/container_base_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/create_atoms.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/create_box.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/custom_value_tracker.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/custom_value_tracker_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/debug_liggghts.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/delete_atoms.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/delete_bonds.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dihedral.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dihedral_hybrid.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/displace_atoms.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/domain.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/domain_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/domain_definitions.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/domain_wedge.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/domain_wedge_dummy.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_atom_vtk.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_custom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_custom_vtk.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_custom_vtm.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_decomposition_vtk.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_euler_vtk.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_image.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_local.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_local_gran.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_local_gran_vtk.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_mesh_stl.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_mesh_vtk.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_mesh_vtm.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_movie.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_particle.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_vtk.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/dump_xyz.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/error.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/error_special.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/finish.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_adapt.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_addforce.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_ave_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_ave_correlate.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_ave_euler.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_ave_histo.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_ave_spatial.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_ave_time.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_aveforce.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_base_liggghts.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_box_relax.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_buoyancy.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_calculate_energy_wall.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_cfd_coupling.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_cfd_coupling_convection.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_cfd_coupling_convection_impl.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_cfd_coupling_convection_species.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_cfd_coupling_force.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_cfd_coupling_force_implicit.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_check_timestep_gran.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_check_timestep_sph.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_contact_atom_counter.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_contact_atom_counter_dummy.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_contact_atom_counter_wall.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_contact_atom_counter_wall_dummy.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_contact_history.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_contact_history_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_contact_history_mesh_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_contact_property_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_contact_property_atom_wall.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_continuum_weighted.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_deform.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_deform_check.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_diam_max.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_drag.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_dt_reset.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_dummy.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_dummy2.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_efield.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_enforce2d.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_external.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_fiber_spring_simple.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_freeze.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_gravity.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_heat_gran.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_heat_gran_conduction.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_insert.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_insert_pack.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_insert_rate_region.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_insert_stream.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_insert_stream_predefined.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_lb_coupling_onetoone.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_lineforce.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_massflow_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_massflow_mesh_sieve.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_mesh_surface.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_minimize.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_mixing.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_momentum.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_move.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_move_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_multicontact_halfspace.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_multisphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_multisphere_break.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_multisphere_comm_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_neighlist_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_nve.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_nve_asphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_nve_asphere_base.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_nve_asphere_noforce.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_nve_limit.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_nve_line.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_nve_noforce.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_nve_sph.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_nve_sph_stationary.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_nve_sphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_nve_superquadric.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_particledistribution_discrete.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_planeforce.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_print.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_property_atom.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_property_atom_region_tracer.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_property_atom_tracer.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_property_atom_tracer_stream.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_property_global.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_read_restart.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_region_variable.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_relax_contacts.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_remove.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_respa.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_rigid.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_scalar_transport_equation.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_setforce.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_sph.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_sph_density_continuity.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_sph_density_corr.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_sph_density_summation.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_sph_pressure.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_spring.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_spring_rg.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_spring_self.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_store.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_store_force.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_store_state.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_template_multiplespheres.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_template_multisphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_template_sphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_template_superquadric.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_viscous.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_wall.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_wall_gran.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_wall_gran_base.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_wall_region.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_wall_region_sph.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/fix_wall_sph.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/force.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/general_container.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/general_container_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/global_properties.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/granular_pair_style.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/granular_styles.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/granular_wall.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/group.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/histogram.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/image.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/improper.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/improper_hybrid.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/info.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/input.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/input_mesh_tet.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/input_mesh_tri.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/input_multisphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/integrate.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/irregular.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/kspace.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/lammps.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/lattice.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/library.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/library_cfd_coupling.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/lmptype.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/lmpwindows.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/math_complex.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/math_const.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/math_extra.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/math_extra_liggghts.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/math_extra_liggghts_nonspherical.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/math_extra_liggghts_superquadric.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/math_special.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/math_vector.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/memory.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/memory_ns.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/mesh_module.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/mesh_module_liquidtransfer.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/mesh_module_stress.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/mesh_module_stress_servo.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/mesh_mover.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/mesh_mover_linear.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/mesh_mover_rotation.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/min.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/min_cg.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/min_linesearch.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/minimize.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/modified_andrew.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/modify.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/mpi_liggghts.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/multi_node_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/multi_node_mesh_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/multi_node_mesh_parallel.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/multi_node_mesh_parallel_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/multi_node_mesh_parallel_buffer_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/multi_vector_container.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/multisphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/multisphere_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/multisphere_parallel.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/multisphere_parallel_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/my_page.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/my_pool_chunk.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_bond.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_derive.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_dummy.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_full.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_gran.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_half_bin.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_half_multi.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_half_nsq.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_list.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_mlg_dummy.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_modify.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_multi_level_grid.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_request.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neigh_respa.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/neighbor.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_base.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_edinburgh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_edinburgh_stiffness.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_hertz.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_hertz_stiffness.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_hooke.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_hooke_hysteresis.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_hooke_stiffness.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_luding.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/normal_model_thornton_ning.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/os_specific.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/output.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pack.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair_gran.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair_gran_base.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair_gran_proxy.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair_hybrid.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair_hybrid_overlay.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair_line_lj.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair_soft.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair_sph.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pair_sph_artvisc_tenscorr.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/particleToInsert.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/particleToInsertSuperquadric.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/particleToInsert_multisphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/pointers.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/primitive_wall.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/primitive_wall_definitions.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/probability_distribution.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/procmap.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/properties.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/property_registry.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/random.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/random_mars.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/random_park.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/read_data.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/read_dump.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/read_restart.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/reader.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/reader_native.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/reader_xyz.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_block.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_cone.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_cylinder.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_intersect.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_mesh_tet.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_mesh_tet_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_neighbor_list.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_neighbor_list_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_neighbor_list_base.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_neighbor_list_definitions.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_plane.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_prism.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_sphere.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_union.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/region_wedge.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/replicate.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/respa.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/rolling_model_base.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/rolling_model_cdt.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/rolling_model_epsd.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/rolling_model_epsd2.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/rolling_model_epsd3.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/rolling_model_luding.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/rotate.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/run.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/run_time.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/scalar_container.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/set.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/settings.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/signal_handling.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/sort_buffer.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/special.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/sph_kernel_cubicspline.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/sph_kernel_cubicspline2D.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/sph_kernel_spiky.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/sph_kernel_spiky2D.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/sph_kernel_wendland.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/sph_kernel_wendland2D.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/sph_kernels.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/string_liggghts.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/suffix.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/superquadric.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_mesh_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_mesh_feature_remove.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_mesh_feature_remove_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_model_base.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_model_default.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_model_multicontact.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/surface_model_superquadric.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tangential_model_base.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tangential_model_history.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tangential_model_luding_tn.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tangential_model_no_history.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tet_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tet_mesh_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/thermo.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/timer.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tracking_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tracking_mesh_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_line.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_mesh_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_mesh_I_superquadric.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_mesh_deform.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_mesh_planar.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/tri_mesh_planar_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/universe.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/update.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/utils.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/variable.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/vector_container.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/vector_liggghts.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/velocity.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/verlet.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/version.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/volume_mesh.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/volume_mesh_I.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/write_data.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/write_dump.h -- Installing: /<>/liggghts-3.8.0+repack1/debian/tmp/usr/include/liggghts/write_restart.h make[1]: Leaving directory '/<>/liggghts-3.8.0+repack1/debian/build' dh_install -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_installdocs -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_installchangelogs -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build debian/rules override_dh_installexamples make[1]: Entering directory '/<>/liggghts-3.8.0+repack1' dh_installexamples find /<>/liggghts-3.8.0+repack1/debian/ -name ".gitignore" | xargs rm -f make[1]: Leaving directory '/<>/liggghts-3.8.0+repack1' dh_installman -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_installinit -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_perl -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_link -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_strip_nondeterminism -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_compress -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_fixperms -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_missing -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_strip -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_makeshlibs -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_shlibdeps -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dpkg-shlibdeps: warning: debian/liggghts/usr/bin/liggghts contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libliggghts3/usr/lib/arm-linux-gnueabihf/libliggghts.so.3.8.0 found in none of the libraries dh_installdeb -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_gencontrol -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dpkg-gencontrol: warning: Depends field of package libliggghts-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build dh_builddeb -a -O--buildsystem=cmake -O--builddirectory=/<>/liggghts-3.8.0\+repack1/debian/build INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 pkgstriptranslations: processing libliggghts-dev (in debian/libliggghts-dev); do_strip: , oemstrip: pkgstriptranslations: processing libliggghts3-dbgsym (in debian/.debhelper/libliggghts3/dbgsym-root); do_strip: , oemstrip: pkgstriptranslations: processing liggghts-dbgsym (in debian/.debhelper/liggghts/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libliggghts-dev/DEBIAN/control, package libliggghts-dev, directory debian/libliggghts-dev pkgstripfiles: processing control file: debian/.debhelper/libliggghts3/dbgsym-root/DEBIAN/control, package libliggghts3-dbgsym, directory debian/.debhelper/libliggghts3/dbgsym-root Searching for duplicated docs in dependency libliggghts3... dpkg-deb: building package 'libliggghts3-dbgsym' in 'debian/.debhelper/scratch-space/build-libliggghts3/libliggghts3-dbgsym_3.8.0+repack1-4_armhf.deb'. symlinking changelog.Debian.gz in libliggghts-dev to file in libliggghts3 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libliggghts-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libliggghts-dev' in '../libliggghts-dev_3.8.0+repack1-4_armhf.deb'. INFO: pkgstriptranslations version 143 pkgstriptranslations: processing libliggghts3 (in debian/libliggghts3); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libliggghts3/DEBIAN/control, package libliggghts3, directory debian/libliggghts3 pkgstripfiles: Truncating usr/share/doc/libliggghts3/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package libliggghts3 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libliggghts3' in '../libliggghts3_3.8.0+repack1-4_armhf.deb'. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/liggghts/dbgsym-root/DEBIAN/control, package liggghts-dbgsym, directory debian/.debhelper/liggghts/dbgsym-root dpkg-deb: building package 'liggghts-dbgsym' in 'debian/.debhelper/scratch-space/build-liggghts/liggghts-dbgsym_3.8.0+repack1-4_armhf.deb'. Renaming liggghts-dbgsym_3.8.0+repack1-4_armhf.deb to liggghts-dbgsym_3.8.0+repack1-4_armhf.ddeb Renaming libliggghts3-dbgsym_3.8.0+repack1-4_armhf.deb to libliggghts3-dbgsym_3.8.0+repack1-4_armhf.ddeb INFO: pkgstriptranslations version 143 pkgstriptranslations: processing liggghts (in debian/liggghts); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/liggghts/DEBIAN/control, package liggghts, directory debian/liggghts Searching for duplicated docs in dependency libliggghts3... symlinking changelog.Debian.gz in liggghts to file in libliggghts3 pkgstripfiles: Running PNG optimization (using 4 cpus) for package liggghts ... pkgstripfiles: No PNG files. dpkg-deb: building package 'liggghts' in '../liggghts_3.8.0+repack1-4_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../liggghts_3.8.0+repack1-4_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20190123-0612 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ liggghts_3.8.0+repack1-4_armhf.changes: --------------------------------------- Format: 1.8 Date: Tue, 22 Jan 2019 20:40:32 +0100 Source: liggghts Binary: libliggghts-dev libliggghts3 liggghts liggghts-doc Architecture: armhf Version: 3.8.0+repack1-4 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Anton Gladky Description: libliggghts-dev - Open Source DEM Particle Simulation Software. Development files libliggghts3 - Open Source DEM Particle Simulation Software. Shared library liggghts - Open Source DEM Particle Simulation Software. liggghts-doc - Open Source DEM Particle Simulation Software. Documentation and e Closes: 917500 Changes: liggghts (3.8.0+repack1-4) unstable; urgency=medium . * [b42dedf] Update CMakeListst. (Closes: 917500) Checksums-Sha1: 6493de340b155e9a9b8447ab243132cc071443f6 259196 libliggghts-dev_3.8.0+repack1-4_armhf.deb ace66a95e686f4fe69ae10a50df0e51855ea9710 17576128 libliggghts3-dbgsym_3.8.0+repack1-4_armhf.ddeb 4a056841fe885a774ea8b99d9725dce1ed681beb 1435404 libliggghts3_3.8.0+repack1-4_armhf.deb 7f1a88acb4f1c4eb1aff99bd6de07f5b9a6d6c3c 33012 liggghts-dbgsym_3.8.0+repack1-4_armhf.ddeb ba4e5bfb5098d69c25a1e8a143c1c0b623ebe8a0 21138 liggghts_3.8.0+repack1-4_armhf.buildinfo 21f71db56e40a5706d398f1ad2f937a64d0bcde4 5692 liggghts_3.8.0+repack1-4_armhf.deb Checksums-Sha256: f5a5430b0bf7f94ccd8ca58919a9f2f10367d9839006ec47e9559cd9963c51bd 259196 libliggghts-dev_3.8.0+repack1-4_armhf.deb 9322ff07c52e27131fd684dc16cf66eececb573062977df2e9adef4692ccdf0a 17576128 libliggghts3-dbgsym_3.8.0+repack1-4_armhf.ddeb 5110547d443c50b4ba05d21200b48e7d4930ecfe6d27062498ab7792bb8280c1 1435404 libliggghts3_3.8.0+repack1-4_armhf.deb ef833f6cb3913aaa029fe114238fd1435756d0f2b958198235b8ac8a9943c0fc 33012 liggghts-dbgsym_3.8.0+repack1-4_armhf.ddeb a6d7f6777bf904d89689f0f3f7ac0e398ff3a0075832e62020a7a16f368bcdbc 21138 liggghts_3.8.0+repack1-4_armhf.buildinfo 98276366ac60b8776182837fe485ce0caca71c3f99c6b4dbaecab3e9aff66a30 5692 liggghts_3.8.0+repack1-4_armhf.deb Files: 52047c977f6b7f67dc7dcb9b7b514ed4 259196 libdevel optional libliggghts-dev_3.8.0+repack1-4_armhf.deb dcbab3214ee12e6e71a3871a0ab15dac 17576128 debug optional libliggghts3-dbgsym_3.8.0+repack1-4_armhf.ddeb 8cc94ab8144c8122740775213781df29 1435404 science optional libliggghts3_3.8.0+repack1-4_armhf.deb 27ec20e89d7d72707d91555c91186abb 33012 debug optional liggghts-dbgsym_3.8.0+repack1-4_armhf.ddeb e5915716136c545ca21aca360ee41435 21138 science optional liggghts_3.8.0+repack1-4_armhf.buildinfo 12a7a3135e3eb0f398659cf610d93155 5692 science optional liggghts_3.8.0+repack1-4_armhf.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libliggghts-dev_3.8.0+repack1-4_armhf.deb ----------------------------------------- new debian package, version 2.0. size 259196 bytes: control archive=11724 bytes. 1048 bytes, 24 lines control 32850 bytes, 447 lines md5sums Package: libliggghts-dev Source: liggghts Version: 3.8.0+repack1-4 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Maintainers Installed-Size: 2960 Depends: libliggghts3 (= 3.8.0+repack1-4), mpi-default-bin Section: libdevel Priority: optional Multi-Arch: same Homepage: http://www.liggghts.com/ Description: Open Source DEM Particle Simulation Software. Development files LIGGGHTS stands for LAMMPS improved for general granular and granular heat transfer simulations. . LAMMPS is a classical molecular dynamics simulator. It is widely used in the field of Molecular Dynamics. Thanks to physical and algorithmic analogies, LAMMPS is a very good platform for DEM simulations. LAMMPS offers a GRANULAR package to perform these kind of simulations. LIGGGHTS aims to improve those capability with the goal to apply it to industrial applications. Development version. . The package contains development files. drwxr-xr-x root/root 0 2019-01-22 19:40 ./ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/include/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/include/liggghts/ -rw-r--r-- root/root 6347 2017-11-30 09:34 ./usr/include/liggghts/abstract_mesh.h -rw-r--r-- root/root 4106 2017-11-30 09:34 ./usr/include/liggghts/accelerator_cuda.h -rw-r--r-- root/root 6602 2017-11-30 09:34 ./usr/include/liggghts/accelerator_omp.h -rw-r--r-- root/root 4567 2017-11-30 09:34 ./usr/include/liggghts/angle.h -rw-r--r-- root/root 4661 2017-11-30 09:34 ./usr/include/liggghts/angle_hybrid.h -rw-r--r-- root/root 6342 2017-11-30 09:34 ./usr/include/liggghts/associative_pointer_array.h -rw-r--r-- root/root 19490 2017-11-30 09:34 ./usr/include/liggghts/associative_pointer_array_I.h -rw-r--r-- root/root 14817 2017-11-30 09:34 ./usr/include/liggghts/atom.h -rw-r--r-- root/root 4592 2017-11-30 09:34 ./usr/include/liggghts/atom_masks.h -rw-r--r-- root/root 8117 2017-11-30 09:34 ./usr/include/liggghts/atom_vec.h -rw-r--r-- root/root 4457 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_atomic.h -rw-r--r-- root/root 4686 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_charge.h -rw-r--r-- root/root 210 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_convexhull.h -rw-r--r-- root/root 5703 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_ellipsoid.h -rw-r--r-- root/root 5090 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_full.h -rw-r--r-- root/root 5006 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_hybrid.h -rw-r--r-- root/root 5847 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_line.h -rw-r--r-- root/root 4997 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_molecular.h -rw-r--r-- root/root 4315 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_sph.h -rw-r--r-- root/root 4220 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_sph_var.h -rw-r--r-- root/root 5667 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_sphere.h -rw-r--r-- root/root 5902 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_superquadric.h -rw-r--r-- root/root 6105 2017-11-30 09:34 ./usr/include/liggghts/atom_vec_tri.h -rw-r--r-- root/root 4638 2017-11-30 09:34 ./usr/include/liggghts/bond.h -rw-r--r-- root/root 3488 2017-11-30 09:34 ./usr/include/liggghts/bond_harmonic.h -rw-r--r-- root/root 4671 2017-11-30 09:34 ./usr/include/liggghts/bond_hybrid.h -rw-r--r-- root/root 5433 2017-11-30 09:34 ./usr/include/liggghts/bounding_box.h -rw-r--r-- root/root 5051 2017-11-30 09:34 ./usr/include/liggghts/cfd_datacoupling.h -rw-r--r-- root/root 3840 2017-11-30 09:34 ./usr/include/liggghts/cfd_datacoupling_file.h -rw-r--r-- root/root 12359 2017-11-30 09:34 ./usr/include/liggghts/cfd_datacoupling_mpi.h -rw-r--r-- root/root 3190 2017-11-30 09:34 ./usr/include/liggghts/cfd_datacoupling_simple.h -rw-r--r-- root/root 3280 2017-11-30 09:34 ./usr/include/liggghts/cfd_regionmodel.h -rw-r--r-- root/root 3047 2017-11-30 09:34 ./usr/include/liggghts/cfd_regionmodel_none.h -rw-r--r-- root/root 5433 2017-11-30 09:34 ./usr/include/liggghts/change_box.h -rw-r--r-- root/root 3293 2017-11-30 09:34 ./usr/include/liggghts/citeme.h -rw-r--r-- root/root 5182 2017-11-30 09:34 ./usr/include/liggghts/cohesion_model_base.h -rw-r--r-- root/root 21951 2017-11-30 09:34 ./usr/include/liggghts/cohesion_model_easo_capillary_viscous.h -rw-r--r-- root/root 5593 2017-11-30 09:34 ./usr/include/liggghts/cohesion_model_sjkr.h -rw-r--r-- root/root 5558 2017-11-30 09:34 ./usr/include/liggghts/cohesion_model_sjkr2.h -rw-r--r-- root/root 26265 2017-11-30 09:34 ./usr/include/liggghts/cohesion_model_washino_capillary_viscous.h -rw-r--r-- root/root 12775 2017-11-30 09:34 ./usr/include/liggghts/comm.h -rw-r--r-- root/root 14012 2017-11-30 09:34 ./usr/include/liggghts/comm_I.h -rw-r--r-- root/root 9025 2017-11-30 09:34 ./usr/include/liggghts/compute.h -rw-r--r-- root/root 5036 2017-11-30 09:34 ./usr/include/liggghts/compute_atom_molecule.h -rw-r--r-- root/root 3850 2017-11-30 09:34 ./usr/include/liggghts/compute_bond_local.h -rw-r--r-- root/root 3919 2017-11-30 09:34 ./usr/include/liggghts/compute_centro_atom.h -rw-r--r-- root/root 4120 2017-11-30 09:34 ./usr/include/liggghts/compute_cluster_atom.h -rw-r--r-- root/root 4266 2017-11-30 09:34 ./usr/include/liggghts/compute_cna_atom.h -rw-r--r-- root/root 3392 2017-11-30 09:34 ./usr/include/liggghts/compute_com.h -rw-r--r-- root/root 3725 2017-11-30 09:34 ./usr/include/liggghts/compute_com_molecule.h -rw-r--r-- root/root 4110 2017-11-30 09:34 ./usr/include/liggghts/compute_contact_atom.h -rw-r--r-- root/root 4123 2017-11-30 09:34 ./usr/include/liggghts/compute_contact_atom_gran.h -rw-r--r-- root/root 4193 2017-11-30 09:34 ./usr/include/liggghts/compute_coord_atom.h -rw-r--r-- root/root 3603 2017-11-30 09:34 ./usr/include/liggghts/compute_displace_atom.h -rw-r--r-- root/root 3259 2017-11-30 09:34 ./usr/include/liggghts/compute_erotate.h -rw-r--r-- root/root 3747 2017-11-30 09:34 ./usr/include/liggghts/compute_erotate_asphere.h -rw-r--r-- root/root 3255 2017-11-30 09:34 ./usr/include/liggghts/compute_erotate_multisphere.h -rw-r--r-- root/root 3761 2017-11-30 09:34 ./usr/include/liggghts/compute_erotate_sphere.h -rw-r--r-- root/root 3949 2017-11-30 09:34 ./usr/include/liggghts/compute_erotate_sphere_atom.h -rw-r--r-- root/root 3284 2017-11-30 09:34 ./usr/include/liggghts/compute_erotate_superquadric.h -rw-r--r-- root/root 4417 2017-11-30 09:34 ./usr/include/liggghts/compute_group_group.h -rw-r--r-- root/root 3454 2017-11-30 09:34 ./usr/include/liggghts/compute_gyration.h -rw-r--r-- root/root 3857 2017-11-30 09:34 ./usr/include/liggghts/compute_gyration_molecule.h -rw-r--r-- root/root 3794 2017-11-30 09:34 ./usr/include/liggghts/compute_inertia_molecule.h -rw-r--r-- root/root 3419 2017-11-30 09:34 ./usr/include/liggghts/compute_ke.h -rw-r--r-- root/root 3575 2017-11-30 09:34 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root/root 2678 2017-11-30 09:34 ./usr/include/liggghts/container.h -rw-r--r-- root/root 12005 2017-11-30 09:34 ./usr/include/liggghts/container_base.h -rw-r--r-- root/root 7289 2017-11-30 09:34 ./usr/include/liggghts/container_base_I.h -rw-r--r-- root/root 4817 2017-11-30 09:34 ./usr/include/liggghts/create_atoms.h -rw-r--r-- root/root 4044 2017-11-30 09:34 ./usr/include/liggghts/create_box.h -rw-r--r-- root/root 8449 2017-11-30 09:34 ./usr/include/liggghts/custom_value_tracker.h -rw-r--r-- root/root 19813 2017-11-30 09:34 ./usr/include/liggghts/custom_value_tracker_I.h -rw-r--r-- root/root 2869 2017-11-30 09:34 ./usr/include/liggghts/debug_liggghts.h -rw-r--r-- root/root 4737 2017-11-30 09:34 ./usr/include/liggghts/delete_atoms.h -rw-r--r-- root/root 4744 2017-11-30 09:34 ./usr/include/liggghts/delete_bonds.h -rw-r--r-- root/root 4570 2017-11-30 09:34 ./usr/include/liggghts/dihedral.h -rw-r--r-- root/root 4539 2017-11-30 09:34 ./usr/include/liggghts/dihedral_hybrid.h -rw-r--r-- root/root 4326 2017-11-30 09:34 ./usr/include/liggghts/displace_atoms.h -rw-r--r-- root/root 12726 2017-11-30 09:34 ./usr/include/liggghts/domain.h -rw-r--r-- root/root 7613 2017-11-30 09:34 ./usr/include/liggghts/domain_I.h -rw-r--r-- root/root 3315 2017-11-30 09:34 ./usr/include/liggghts/domain_definitions.h -rw-r--r-- root/root 32 2017-11-30 09:34 ./usr/include/liggghts/domain_wedge.h -rw-r--r-- root/root 2980 2017-11-30 09:34 ./usr/include/liggghts/domain_wedge_dummy.h -rw-r--r-- root/root 7824 2017-11-30 09:34 ./usr/include/liggghts/dump.h -rw-r--r-- root/root 4062 2017-11-30 09:34 ./usr/include/liggghts/dump_atom_vtk.h -rw-r--r-- root/root 11735 2017-11-30 09:34 ./usr/include/liggghts/dump_custom.h -rw-r--r-- root/root 9139 2017-11-30 09:34 ./usr/include/liggghts/dump_custom_vtk.h -rw-r--r-- root/root 8179 2017-11-30 09:34 ./usr/include/liggghts/dump_custom_vtm.h -rw-r--r-- root/root 3624 2017-11-30 09:34 ./usr/include/liggghts/dump_decomposition_vtk.h -rw-r--r-- root/root 3193 2017-11-30 09:34 ./usr/include/liggghts/dump_euler_vtk.h -rw-r--r-- root/root 7302 2017-11-30 09:34 ./usr/include/liggghts/dump_image.h -rw-r--r-- root/root 6230 2017-11-30 09:34 ./usr/include/liggghts/dump_local.h -rw-r--r-- root/root 6651 2017-11-30 09:34 ./usr/include/liggghts/dump_local_gran.h -rw-r--r-- root/root 4968 2017-11-30 09:34 ./usr/include/liggghts/dump_local_gran_vtk.h -rw-r--r-- root/root 4855 2017-11-30 09:34 ./usr/include/liggghts/dump_mesh.h -rw-r--r-- root/root 3364 2017-11-30 09:34 ./usr/include/liggghts/dump_mesh_stl.h -rw-r--r-- root/root 3288 2017-11-30 09:34 ./usr/include/liggghts/dump_mesh_vtk.h -rw-r--r-- root/root 3280 2017-11-30 09:34 ./usr/include/liggghts/dump_mesh_vtm.h -rw-r--r-- root/root 4163 2017-11-30 09:34 ./usr/include/liggghts/dump_movie.h -rw-r--r-- root/root 14170 2017-11-30 09:34 ./usr/include/liggghts/dump_particle.h -rw-r--r-- root/root 5089 2017-11-30 09:34 ./usr/include/liggghts/dump_vtk.h -rw-r--r-- root/root 3944 2017-11-30 09:34 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root/root 4032 2017-11-30 09:34 ./usr/include/liggghts/fix_nve_sphere.h -rw-r--r-- root/root 3245 2017-11-30 09:34 ./usr/include/liggghts/fix_nve_superquadric.h -rw-r--r-- root/root 5620 2017-11-30 09:34 ./usr/include/liggghts/fix_particledistribution_discrete.h -rw-r--r-- root/root 3486 2017-11-30 09:34 ./usr/include/liggghts/fix_planeforce.h -rw-r--r-- root/root 3540 2017-11-30 09:34 ./usr/include/liggghts/fix_print.h -rw-r--r-- root/root 4909 2017-11-30 09:34 ./usr/include/liggghts/fix_property_atom.h -rw-r--r-- root/root 3497 2017-11-30 09:34 ./usr/include/liggghts/fix_property_atom_region_tracer.h -rw-r--r-- root/root 3329 2017-11-30 09:34 ./usr/include/liggghts/fix_property_atom_tracer.h -rw-r--r-- root/root 3642 2017-11-30 09:34 ./usr/include/liggghts/fix_property_atom_tracer_stream.h -rw-r--r-- root/root 4783 2017-11-30 09:34 ./usr/include/liggghts/fix_property_global.h -rw-r--r-- root/root 3393 2017-11-30 09:34 ./usr/include/liggghts/fix_read_restart.h -rw-r--r-- root/root 3077 2017-11-30 09:34 ./usr/include/liggghts/fix_region_variable.h -rw-r--r-- root/root 135 2017-11-30 09:34 ./usr/include/liggghts/fix_relax_contacts.h -rw-r--r-- root/root 74 2017-11-30 09:34 ./usr/include/liggghts/fix_remove.h -rw-r--r-- root/root 3417 2017-11-30 09:34 ./usr/include/liggghts/fix_respa.h -rw-r--r-- root/root 10060 2017-11-30 09:34 ./usr/include/liggghts/fix_rigid.h -rw-r--r-- root/root 4829 2017-11-30 09:34 ./usr/include/liggghts/fix_scalar_transport_equation.h -rw-r--r-- root/root 4152 2017-11-30 09:34 ./usr/include/liggghts/fix_setforce.h -rw-r--r-- root/root 3420 2017-11-30 09:34 ./usr/include/liggghts/fix_sph.h -rw-r--r-- root/root 2919 2017-11-30 09:34 ./usr/include/liggghts/fix_sph_density_continuity.h -rw-r--r-- root/root 3112 2017-11-30 09:34 ./usr/include/liggghts/fix_sph_density_corr.h -rw-r--r-- root/root 2867 2017-11-30 09:34 ./usr/include/liggghts/fix_sph_density_summation.h -rw-r--r-- root/root 3064 2017-11-30 09:34 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root/root 4760 2017-11-30 09:34 ./usr/include/liggghts/fix_wall.h -rw-r--r-- root/root 10012 2017-11-30 09:34 ./usr/include/liggghts/fix_wall_gran.h -rw-r--r-- root/root 13555 2017-11-30 09:34 ./usr/include/liggghts/fix_wall_gran_base.h -rw-r--r-- root/root 4325 2017-11-30 09:34 ./usr/include/liggghts/fix_wall_region.h -rw-r--r-- root/root 3260 2017-11-30 09:34 ./usr/include/liggghts/fix_wall_region_sph.h -rw-r--r-- root/root 2883 2017-11-30 09:34 ./usr/include/liggghts/fix_wall_sph.h -rw-r--r-- root/root 10990 2017-11-30 09:34 ./usr/include/liggghts/force.h -rw-r--r-- root/root 7871 2017-11-30 09:34 ./usr/include/liggghts/general_container.h -rw-r--r-- root/root 30460 2017-11-30 09:34 ./usr/include/liggghts/general_container_I.h -rw-r--r-- root/root 10938 2017-11-30 09:34 ./usr/include/liggghts/global_properties.h -rw-r--r-- root/root 3678 2017-11-30 09:34 ./usr/include/liggghts/granular_pair_style.h -rw-r--r-- root/root 6496 2017-11-30 09:34 ./usr/include/liggghts/granular_styles.h -rw-r--r-- root/root 3548 2017-11-30 09:34 ./usr/include/liggghts/granular_wall.h -rw-r--r-- root/root 6570 2017-11-30 09:34 ./usr/include/liggghts/group.h -rw-r--r-- root/root 8390 2017-11-30 09:34 ./usr/include/liggghts/histogram.h -rw-r--r-- root/root 7068 2017-11-30 09:34 ./usr/include/liggghts/image.h -rw-r--r-- root/root 4529 2017-11-30 09:34 ./usr/include/liggghts/improper.h -rw-r--r-- root/root 4518 2017-11-30 09:34 ./usr/include/liggghts/improper_hybrid.h -rw-r--r-- root/root 3761 2017-11-30 09:34 ./usr/include/liggghts/info.h -rw-r--r-- root/root 12465 2017-11-30 09:34 ./usr/include/liggghts/input.h -rw-r--r-- root/root 2973 2017-11-30 09:34 ./usr/include/liggghts/input_mesh_tet.h -rw-r--r-- root/root 3459 2017-11-30 09:34 ./usr/include/liggghts/input_mesh_tri.h -rw-r--r-- root/root 2981 2017-11-30 09:34 ./usr/include/liggghts/input_multisphere.h -rw-r--r-- root/root 3944 2017-11-30 09:34 ./usr/include/liggghts/integrate.h -rw-r--r-- root/root 5795 2017-11-30 09:34 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2017-11-30 09:34 ./usr/include/liggghts/output.h -rw-r--r-- root/root 25791 2017-11-30 09:34 ./usr/include/liggghts/pack.h -rw-r--r-- root/root 13137 2017-11-30 09:34 ./usr/include/liggghts/pair.h -rw-r--r-- root/root 9624 2017-11-30 09:34 ./usr/include/liggghts/pair_gran.h -rw-r--r-- root/root 17758 2017-11-30 09:34 ./usr/include/liggghts/pair_gran_base.h -rw-r--r-- root/root 3465 2017-11-30 09:34 ./usr/include/liggghts/pair_gran_proxy.h -rw-r--r-- root/root 5570 2017-11-30 09:34 ./usr/include/liggghts/pair_hybrid.h -rw-r--r-- root/root 3405 2017-11-30 09:34 ./usr/include/liggghts/pair_hybrid_overlay.h -rw-r--r-- root/root 4285 2017-11-30 09:34 ./usr/include/liggghts/pair_line_lj.h -rw-r--r-- root/root 3987 2017-11-30 09:34 ./usr/include/liggghts/pair_soft.h -rw-r--r-- root/root 4335 2017-11-30 09:34 ./usr/include/liggghts/pair_sph.h -rw-r--r-- root/root 3589 2017-11-30 09:34 ./usr/include/liggghts/pair_sph_artvisc_tenscorr.h -rw-r--r-- root/root 4873 2017-11-30 09:34 ./usr/include/liggghts/particleToInsert.h -rw-r--r-- root/root 3313 2017-11-30 09:34 ./usr/include/liggghts/particleToInsertSuperquadric.h -rw-r--r-- root/root 3836 2017-11-30 09:34 ./usr/include/liggghts/particleToInsert_multisphere.h -rw-r--r-- root/root 4588 2017-11-30 09:34 ./usr/include/liggghts/pointers.h -rw-r--r-- root/root 5405 2017-11-30 09:34 ./usr/include/liggghts/primitive_wall.h -rw-r--r-- root/root 10299 2017-11-30 09:34 ./usr/include/liggghts/primitive_wall_definitions.h -rw-r--r-- root/root 10232 2017-11-30 09:34 ./usr/include/liggghts/probability_distribution.h -rw-r--r-- root/root 5306 2017-11-30 09:34 ./usr/include/liggghts/procmap.h -rw-r--r-- root/root 3507 2017-11-30 09:34 ./usr/include/liggghts/properties.h -rw-r--r-- root/root 6944 2017-11-30 09:34 ./usr/include/liggghts/property_registry.h -rw-r--r-- root/root 2787 2017-11-30 09:34 ./usr/include/liggghts/random.h -rw-r--r-- root/root 3345 2017-11-30 09:34 ./usr/include/liggghts/random_mars.h -rw-r--r-- root/root 3336 2017-11-30 09:34 ./usr/include/liggghts/random_park.h -rw-r--r-- root/root 12815 2017-11-30 09:34 ./usr/include/liggghts/read_data.h -rw-r--r-- root/root 6560 2017-11-30 09:34 ./usr/include/liggghts/read_dump.h -rw-r--r-- root/root 6508 2017-11-30 09:34 ./usr/include/liggghts/read_restart.h -rw-r--r-- root/root 3876 2017-11-30 09:34 ./usr/include/liggghts/reader.h -rw-r--r-- root/root 3728 2017-11-30 09:34 ./usr/include/liggghts/reader_native.h -rw-r--r-- root/root 3717 2017-11-30 09:34 ./usr/include/liggghts/reader_xyz.h -rw-r--r-- root/root 7233 2017-11-30 09:34 ./usr/include/liggghts/region.h -rw-r--r-- root/root 3656 2017-11-30 09:34 ./usr/include/liggghts/region_block.h -rw-r--r-- root/root 3899 2017-11-30 09:34 ./usr/include/liggghts/region_cone.h -rw-r--r-- root/root 4050 2017-11-30 09:34 ./usr/include/liggghts/region_cylinder.h -rw-r--r-- root/root 3633 2017-11-30 09:34 ./usr/include/liggghts/region_intersect.h -rw-r--r-- root/root 4454 2017-11-30 09:34 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root/root 6357 2017-11-30 09:34 ./usr/include/liggghts/respa.h -rw-r--r-- root/root 4810 2017-11-30 09:34 ./usr/include/liggghts/rolling_model_base.h -rw-r--r-- root/root 6905 2017-11-30 09:34 ./usr/include/liggghts/rolling_model_cdt.h -rw-r--r-- root/root 13524 2017-11-30 09:34 ./usr/include/liggghts/rolling_model_epsd.h -rw-r--r-- root/root 8380 2017-11-30 09:34 ./usr/include/liggghts/rolling_model_epsd2.h -rw-r--r-- root/root 10145 2017-11-30 09:34 ./usr/include/liggghts/rolling_model_epsd3.h -rw-r--r-- root/root 17857 2017-11-30 09:34 ./usr/include/liggghts/rolling_model_luding.h -rw-r--r-- root/root 2777 2017-11-30 09:34 ./usr/include/liggghts/rotate.h -rw-r--r-- root/root 4167 2017-11-30 09:34 ./usr/include/liggghts/run.h -rw-r--r-- root/root 4242 2017-11-30 09:34 ./usr/include/liggghts/run_time.h -rw-r--r-- root/root 7319 2017-11-30 09:34 ./usr/include/liggghts/scalar_container.h -rw-r--r-- root/root 6410 2017-11-30 09:34 ./usr/include/liggghts/set.h -rw-r--r-- root/root 8339 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root/root 3027 2017-11-30 09:34 ./usr/include/liggghts/suffix.h -rw-r--r-- root/root 7429 2017-11-30 09:34 ./usr/include/liggghts/superquadric.h -rw-r--r-- root/root 10827 2017-11-30 09:34 ./usr/include/liggghts/surface_mesh.h -rw-r--r-- root/root 53724 2017-11-30 09:34 ./usr/include/liggghts/surface_mesh_I.h -rw-r--r-- root/root 170 2017-11-30 09:34 ./usr/include/liggghts/surface_mesh_feature_remove.h -rw-r--r-- root/root 1 2017-11-30 09:34 ./usr/include/liggghts/surface_mesh_feature_remove_I.h -rw-r--r-- root/root 6029 2017-11-30 09:34 ./usr/include/liggghts/surface_model_base.h -rw-r--r-- root/root 8945 2017-11-30 09:34 ./usr/include/liggghts/surface_model_default.h -rw-r--r-- root/root 9937 2017-11-30 09:34 ./usr/include/liggghts/surface_model_multicontact.h -rw-r--r-- root/root 11602 2017-11-30 09:34 ./usr/include/liggghts/surface_model_superquadric.h -rw-r--r-- root/root 4929 2017-11-30 09:34 ./usr/include/liggghts/tangential_model_base.h -rw-r--r-- root/root 16017 2017-11-30 09:34 ./usr/include/liggghts/tangential_model_history.h -rw-r--r-- root/root 10850 2017-11-30 09:34 ./usr/include/liggghts/tangential_model_luding_tn.h -rw-r--r-- root/root 11010 2017-11-30 09:34 ./usr/include/liggghts/tangential_model_no_history.h -rw-r--r-- root/root 3393 2017-11-30 09:34 ./usr/include/liggghts/tet_mesh.h -rw-r--r-- root/root 7244 2017-11-30 09:34 ./usr/include/liggghts/tet_mesh_I.h -rw-r--r-- root/root 13445 2017-11-30 09:34 ./usr/include/liggghts/thermo.h -rw-r--r-- root/root 3244 2017-11-30 09:34 ./usr/include/liggghts/timer.h -rw-r--r-- root/root 7744 2017-11-30 09:34 ./usr/include/liggghts/tracking_mesh.h -rw-r--r-- root/root 16045 2017-11-30 09:34 ./usr/include/liggghts/tracking_mesh_I.h -rw-r--r-- root/root 138 2017-11-30 09:34 ./usr/include/liggghts/tri_line.h -rw-r--r-- root/root 6221 2017-11-30 09:34 ./usr/include/liggghts/tri_mesh.h -rw-r--r-- root/root 14336 2017-11-30 09:34 ./usr/include/liggghts/tri_mesh_I.h -rw-r--r-- root/root 11251 2017-11-30 09:34 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-rw-r--r-- root/root 5439 2017-11-30 09:34 ./usr/include/liggghts/volume_mesh.h -rw-r--r-- root/root 16187 2017-11-30 09:34 ./usr/include/liggghts/volume_mesh_I.h -rw-r--r-- root/root 3697 2017-11-30 09:34 ./usr/include/liggghts/write_data.h -rw-r--r-- root/root 3617 2017-11-30 09:34 ./usr/include/liggghts/write_dump.h -rw-r--r-- root/root 4260 2017-11-30 09:34 ./usr/include/liggghts/write_restart.h drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2019-01-22 19:40 ./usr/lib/arm-linux-gnueabihf/libliggghts.so -> libliggghts.so.3 drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/share/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/share/doc/libliggghts-dev/ lrwxrwxrwx root/root 0 2019-01-22 19:40 ./usr/share/doc/libliggghts-dev/changelog.Debian.gz -> ../libliggghts3/changelog.Debian.gz -rw-r--r-- root/root 2002 2017-07-17 21:19 ./usr/share/doc/libliggghts-dev/copyright libliggghts3_3.8.0+repack1-4_armhf.deb -------------------------------------- new debian package, version 2.0. size 1435404 bytes: control archive=1116 bytes. 1103 bytes, 24 lines control 235 bytes, 3 lines md5sums 27 bytes, 1 lines shlibs 70 bytes, 2 lines triggers Package: libliggghts3 Source: liggghts Version: 3.8.0+repack1-4 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Maintainers Installed-Size: 5500 Depends: mpi-default-bin, libc6 (>= 2.4), libgcc1 (>= 1:3.5), libjpeg8 (>= 8c), libopenmpi3, libstdc++6 (>= 5.2), libvtk6.3 Section: science Priority: optional Multi-Arch: same Homepage: http://www.liggghts.com/ Description: Open Source DEM Particle Simulation Software. Shared library LIGGGHTS stands for LAMMPS improved for general granular and granular heat transfer simulations. . LAMMPS is a classical molecular dynamics simulator. It is widely used in the field of Molecular Dynamics. Thanks to physical and algorithmic analogies, LAMMPS is a very good platform for DEM simulations. LAMMPS offers a GRANULAR package to perform these kind of simulations. LIGGGHTS aims to improve those capability with the goal to apply it to industrial applications. Development version. . The package contains shared library. drwxr-xr-x root/root 0 2019-01-22 19:40 ./ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/lib/arm-linux-gnueabihf/ lrwxrwxrwx root/root 0 2019-01-22 19:40 ./usr/lib/arm-linux-gnueabihf/libliggghts.so.3 -> libliggghts.so.3.8.0 -rw-r--r-- root/root 5615148 2019-01-22 19:40 ./usr/lib/arm-linux-gnueabihf/libliggghts.so.3.8.0 drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/share/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/share/doc/libliggghts3/ -rw-r--r-- root/root 934 2019-01-22 19:40 ./usr/share/doc/libliggghts3/changelog.Debian.gz -rw-r--r-- root/root 2002 2017-07-17 21:19 ./usr/share/doc/libliggghts3/copyright liggghts_3.8.0+repack1-4_armhf.deb ---------------------------------- new debian package, version 2.0. size 5692 bytes: control archive=968 bytes. 1036 bytes, 22 lines control 193 bytes, 3 lines md5sums Package: liggghts Version: 3.8.0+repack1-4 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Maintainers Installed-Size: 21 Depends: libliggghts3 (>= 3.8.0+repack1-4), mpi-default-bin, libc6 (>= 2.4), libopenmpi3, libstdc++6 (>= 4.3.0) Recommends: paraview Section: science Priority: optional Multi-Arch: foreign Homepage: http://www.liggghts.com/ Description: Open Source DEM Particle Simulation Software. LIGGGHTS stands for LAMMPS improved for general granular and granular heat transfer simulations. . LAMMPS is a classical molecular dynamics simulator. It is widely used in the field of Molecular Dynamics. Thanks to physical and algorithmic analogies, LAMMPS is a very good platform for DEM simulations. LAMMPS offers a GRANULAR package to perform these kind of simulations. LIGGGHTS aims to improve those capability with the goal to apply it to industrial applications. Development version. drwxr-xr-x root/root 0 2019-01-22 19:40 ./ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/bin/ -rwxr-xr-x root/root 5592 2019-01-22 19:40 ./usr/bin/liggghts drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/share/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/share/doc/liggghts/ lrwxrwxrwx root/root 0 2019-01-22 19:40 ./usr/share/doc/liggghts/changelog.Debian.gz -> ../libliggghts3/changelog.Debian.gz -rw-r--r-- root/root 2002 2017-07-17 21:19 ./usr/share/doc/liggghts/copyright drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/share/man/ drwxr-xr-x root/root 0 2019-01-22 19:40 ./usr/share/man/man2/ -rw-r--r-- root/root 875 2019-01-22 19:40 ./usr/share/man/man2/liggghts.2011-11-4.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build-Space: 310228 Build-Time: 720 Distribution: disco-proposed Host Architecture: armhf Install-Time: 137 Job: liggghts_3.8.0+repack1-4.dsc Machine Architecture: arm64 Package: liggghts Package-Time: 859 Source-Version: 3.8.0+repack1-4 Space: 310228 Status: successful Version: 3.8.0+repack1-4 -------------------------------------------------------------------------------- Finished at 20190123-0612 Build needed 00:14:19, 310228k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=armhf PACKAGEBUILD-16311982 Scanning for processes to kill in build PACKAGEBUILD-16311982