RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lgw01-amd64-010 4.4.0-101-generic #124-Ubuntu SMP Fri Nov 10 18:29:59 UTC 2017 x86_64 Buildd toolchain package versions: launchpad-buildd_157 python-lpbuildd_157 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.3 dpkg-dev_1.18.4ubuntu1.3 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 6 Feb 01:58:00 ntpdate[1810]: adjust time server 10.211.37.1 offset -0.000283 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-14314967 /home/buildd/filecache-default/f027e517e95d0e91684230ee23be60d709f816c0 Creating target for build PACKAGEBUILD-14314967 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-14314967 Starting target for build PACKAGEBUILD-14314967 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-14314967 'deb http://ftpmaster.internal/ubuntu bionic main universe' 'deb http://ftpmaster.internal/ubuntu bionic-security main universe' 'deb http://ftpmaster.internal/ubuntu bionic-updates main universe' 'deb http://ftpmaster.internal/ubuntu bionic-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-14314967 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-14314967 Updating target for build PACKAGEBUILD-14314967 Get:1 http://ftpmaster.internal/ubuntu bionic InRelease [235 kB] Get:2 http://ftpmaster.internal/ubuntu bionic-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu bionic-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu bionic-proposed InRelease [235 kB] Get:5 http://ftpmaster.internal/ubuntu bionic/main amd64 Packages [1006 kB] Get:6 http://ftpmaster.internal/ubuntu bionic/main Translation-en [515 kB] Get:7 http://ftpmaster.internal/ubuntu bionic/universe amd64 Packages [8415 kB] Get:8 http://ftpmaster.internal/ubuntu bionic/universe Translation-en [4947 kB] Get:9 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 Packages [191 kB] Get:10 http://ftpmaster.internal/ubuntu bionic-proposed/main Translation-en [82.9 kB] Get:11 http://ftpmaster.internal/ubuntu bionic-proposed/universe amd64 Packages [798 kB] Get:12 http://ftpmaster.internal/ubuntu bionic-proposed/universe Translation-en [304 kB] Fetched 16.9 MB in 4s (3475 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: gnupg-agent libcryptsetup4 libcurl3-gnutls libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libnghttp2-14 libpsl5 librtmp1 libssl1.0.0 libustr-1.0-1 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: dirmngr gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpg-wks-server gpgconf gpgsm libargon2-0 libcryptsetup12 libgdbm5 libjson-c3 libmpfr6 libnghttp2-14 libssl1.1 The following packages will be upgraded: adduser apt apt-transport-https base-files base-passwd binutils binutils-common binutils-x86-64-linux-gnu bsdutils build-essential coreutils cpp-7 dash debconf debianutils dmsetup dpkg dpkg-dev e2fslibs e2fsprogs fakeroot fdisk findutils g++-7 gcc-7 gcc-7-base gnupg gnupg-agent gpgv hostname init init-system-helpers libapparmor1 libapt-pkg5.0 libasan4 libasn1-8-heimdal libassuan0 libatomic1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcilkrts5 libcomerr2 libcurl3-gnutls libdevmapper1.02.1 libdpkg-perl libfakeroot libfdisk1 libffi6 libgcc-7-dev libgcc1 libgcrypt20 libgmp10 libgnutls30 libgomp1 libgpg-error0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libidn11 libidn2-0 libip4tc0 libitm1 libk5crypto3 libkeyutils1 libkmod2 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblockfile-bin liblockfile1 liblsan0 libmount1 libmpc3 libmpx2 libncurses5 libncursesw5 libnettle6 libnpth0 libp11-kit0 libpcre3 libperl5.26 libpng16-16 libprocps6 libpsl5 libquadmath0 libreadline7 libroken18-heimdal libsasl2-2 libsasl2-modules-db libseccomp2 libselinux1 libsemanage-common libsemanage1 libslang2 libsmartcols1 libsqlite3-0 libss2 libssl1.0.0 libstdc++-7-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo5 libtsan0 libubsan0 libudev1 libuuid1 libwind0-heimdal linux-libc-dev login lsb-base mount multiarch-support ncurses-base ncurses-bin openssl optipng passwd perl perl-base perl-modules-5.26 pinentry-curses procps readline-common sed sensible-utils systemd systemd-sysv sysvinit-utils tzdata ubuntu-keyring util-linux 143 upgraded, 16 newly installed, 0 to remove and 0 not upgraded. Need to get 69.9 MB of archives. After this operation, 11.7 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 perl-modules-5.26 all 5.26.1-4build1 [2760 kB] Get:2 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libgdbm5 amd64 1.14.1-2ubuntu1 [26.5 kB] Get:3 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libperl5.26 amd64 5.26.1-4build1 [3530 kB] Get:4 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 perl amd64 5.26.1-4build1 [201 kB] Get:5 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 perl-base amd64 5.26.1-4build1 [1389 kB] Get:6 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libc6-dev amd64 2.26-0ubuntu4 [2531 kB] Get:7 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libc-dev-bin amd64 2.26-0ubuntu4 [69.8 kB] Get:8 http://ftpmaster.internal/ubuntu bionic/main amd64 linux-libc-dev amd64 4.13.0-32.35 [950 kB] Get:9 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libitm1 amd64 7.3.0-1ubuntu1 [27.5 kB] Get:10 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gcc-7-base amd64 7.3.0-1ubuntu1 [19.3 kB] Get:11 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libgcc1 amd64 1:7.3.0-1ubuntu1 [39.3 kB] Get:12 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libmpx2 amd64 7.3.0-1ubuntu1 [11.8 kB] Get:13 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libgomp1 amd64 7.3.0-1ubuntu1 [76.3 kB] Get:14 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libatomic1 amd64 7.3.0-1ubuntu1 [8976 B] Get:15 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libasan4 amd64 7.3.0-1ubuntu1 [358 kB] Get:16 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 liblsan0 amd64 7.3.0-1ubuntu1 [134 kB] Get:17 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libtsan0 amd64 7.3.0-1ubuntu1 [281 kB] Get:18 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libubsan0 amd64 7.3.0-1ubuntu1 [126 kB] Get:19 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libcilkrts5 amd64 7.3.0-1ubuntu1 [42.4 kB] Get:20 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libquadmath0 amd64 7.3.0-1ubuntu1 [133 kB] Get:21 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libmpc3 amd64 1.1.0-1 [40.8 kB] Get:22 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libmpfr6 amd64 4.0.1~rc2-1 [243 kB] Get:23 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 cpp-7 amd64 7.3.0-1ubuntu1 [6735 kB] Get:24 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libcc1-0 amd64 7.3.0-1ubuntu1 [38.7 kB] Get:25 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 binutils-x86-64-linux-gnu amd64 2.30-2ubuntu1 [1856 kB] Get:26 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libbinutils amd64 2.30-2ubuntu1 [502 kB] Get:27 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 binutils amd64 2.30-2ubuntu1 [3392 B] Get:28 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 binutils-common amd64 2.30-2ubuntu1 [193 kB] Get:29 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 g++-7 amd64 7.3.0-1ubuntu1 [7565 kB] Get:30 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gcc-7 amd64 7.3.0-1ubuntu1 [7435 kB] Get:31 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libgcc-7-dev amd64 7.3.0-1ubuntu1 [2380 kB] Get:32 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libstdc++-7-dev amd64 7.3.0-1ubuntu1 [1459 kB] Get:33 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libstdc++6 amd64 7.3.0-1ubuntu1 [396 kB] Get:34 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libgmp10 amd64 2:6.1.2+dfsg-2 [240 kB] Get:35 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libc6 amd64 2.26-0ubuntu4 [2784 kB] Get:36 http://ftpmaster.internal/ubuntu bionic/main amd64 init-system-helpers all 1.51 [37.3 kB] Get:37 http://ftpmaster.internal/ubuntu bionic/main amd64 base-files amd64 10ubuntu1 [55.9 kB] Get:38 http://ftpmaster.internal/ubuntu bionic/main amd64 bsdutils amd64 1:2.30.2-0.1ubuntu1 [60.1 kB] Get:39 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 coreutils amd64 8.28-1ubuntu1 [1231 kB] Get:40 http://ftpmaster.internal/ubuntu bionic/main amd64 debianutils amd64 4.8.4 [85.7 kB] Get:41 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 dpkg amd64 1.19.0.5ubuntu1 [1140 kB] Get:42 http://ftpmaster.internal/ubuntu bionic/main amd64 dash amd64 0.5.8-2.10 [88.5 kB] Get:43 http://ftpmaster.internal/ubuntu bionic/main amd64 e2fslibs amd64 1.43.8-2 [157 kB] Get:44 http://ftpmaster.internal/ubuntu bionic/main amd64 e2fsprogs amd64 1.43.8-2 [501 kB] Get:45 http://ftpmaster.internal/ubuntu bionic/main amd64 findutils amd64 4.6.0+git+20170828-2 [291 kB] Get:46 http://ftpmaster.internal/ubuntu bionic/main amd64 hostname amd64 3.20 [11.3 kB] Get:47 http://ftpmaster.internal/ubuntu bionic/main amd64 login amd64 1:4.5-1ubuntu1 [307 kB] Get:48 http://ftpmaster.internal/ubuntu bionic/main amd64 libncurses5 amd64 6.0+20171125-1ubuntu1 [95.0 kB] Get:49 http://ftpmaster.internal/ubuntu bionic/main amd64 libtinfo5 amd64 6.0+20171125-1ubuntu1 [80.2 kB] Get:50 http://ftpmaster.internal/ubuntu bionic/main amd64 libncursesw5 amd64 6.0+20171125-1ubuntu1 [117 kB] Get:51 http://ftpmaster.internal/ubuntu bionic/main amd64 ncurses-bin amd64 6.0+20171125-1ubuntu1 [162 kB] Get:52 http://ftpmaster.internal/ubuntu bionic/main amd64 sed amd64 4.4-2 [182 kB] Get:53 http://ftpmaster.internal/ubuntu bionic/main amd64 libuuid1 amd64 2.30.2-0.1ubuntu1 [14.8 kB] Get:54 http://ftpmaster.internal/ubuntu bionic/main amd64 libblkid1 amd64 2.30.2-0.1ubuntu1 [119 kB] Get:55 http://ftpmaster.internal/ubuntu bionic/main amd64 libsmartcols1 amd64 2.30.2-0.1ubuntu1 [78.8 kB] Get:56 http://ftpmaster.internal/ubuntu bionic/main amd64 libfdisk1 amd64 2.30.2-0.1ubuntu1 [157 kB] Get:57 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libpcre3 amd64 2:8.39-9 [229 kB] Get:58 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libselinux1 amd64 2.7-2build1 [68.3 kB] Get:59 http://ftpmaster.internal/ubuntu bionic/main amd64 libmount1 amd64 2.30.2-0.1ubuntu1 [131 kB] Get:60 http://ftpmaster.internal/ubuntu bionic/main amd64 fdisk amd64 2.30.2-0.1ubuntu1 [105 kB] Get:61 http://ftpmaster.internal/ubuntu bionic/main amd64 util-linux amd64 2.30.2-0.1ubuntu1 [879 kB] Get:62 http://ftpmaster.internal/ubuntu bionic/main amd64 base-passwd amd64 3.5.44 [47.2 kB] Get:63 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libc-bin amd64 2.26-0ubuntu4 [615 kB] Get:64 http://ftpmaster.internal/ubuntu bionic/main amd64 ncurses-base all 6.0+20171125-1ubuntu1 [17.3 kB] Get:65 http://ftpmaster.internal/ubuntu bionic/main amd64 sysvinit-utils amd64 2.88dsf-59.10ubuntu1 [18.6 kB] Get:66 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libudev1 amd64 237-1ubuntu2 [54.6 kB] Get:67 http://ftpmaster.internal/ubuntu bionic/main amd64 libapt-pkg5.0 amd64 1.6~alpha7ubuntu1 [798 kB] Get:68 http://ftpmaster.internal/ubuntu bionic/main amd64 libsemanage-common all 2.7-2build1 [6944 B] Get:69 http://ftpmaster.internal/ubuntu bionic/main amd64 libsemanage1 amd64 2.7-2build1 [84.4 kB] Get:70 http://ftpmaster.internal/ubuntu bionic/main amd64 passwd amd64 1:4.5-1ubuntu1 [816 kB] Get:71 http://ftpmaster.internal/ubuntu bionic/main amd64 debconf all 1.5.65 [124 kB] Get:72 http://ftpmaster.internal/ubuntu bionic/main amd64 adduser all 3.116ubuntu1 [163 kB] Get:73 http://ftpmaster.internal/ubuntu bionic/main amd64 libgpg-error0 amd64 1.27-5 [36.9 kB] Get:74 http://ftpmaster.internal/ubuntu bionic/main amd64 libgcrypt20 amd64 1.8.1-4 [417 kB] Get:75 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gpgv amd64 2.2.4-1ubuntu1 [196 kB] Get:76 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 ubuntu-keyring all 2018.02.05 [18.5 kB] Get:77 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libnettle6 amd64 3.4-1 [109 kB] Get:78 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libhogweed4 amd64 3.4-1 [137 kB] Get:79 http://ftpmaster.internal/ubuntu bionic/main amd64 libidn2-0 amd64 2.0.4-1 [93.2 kB] Get:80 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libffi6 amd64 3.2.1-8 [17.9 kB] Get:81 http://ftpmaster.internal/ubuntu bionic/main amd64 libp11-kit0 amd64 0.23.9-2 [187 kB] Get:82 http://ftpmaster.internal/ubuntu bionic/main amd64 libtasn1-6 amd64 4.13-2 [36.2 kB] Get:83 http://ftpmaster.internal/ubuntu bionic/main amd64 libgnutls30 amd64 3.5.17-1ubuntu1 [685 kB] Get:84 http://ftpmaster.internal/ubuntu bionic/main amd64 libseccomp2 amd64 2.3.1-2.1ubuntu3 [37.3 kB] Get:85 http://ftpmaster.internal/ubuntu bionic/main amd64 apt amd64 1.6~alpha7ubuntu1 [1153 kB] Get:86 http://ftpmaster.internal/ubuntu bionic/main amd64 libargon2-0 amd64 0~20161029-1.1 [19.9 kB] Get:87 http://ftpmaster.internal/ubuntu bionic/main amd64 libjson-c3 amd64 0.12.1-1.3 [21.4 kB] Get:88 http://ftpmaster.internal/ubuntu bionic/main amd64 libdevmapper1.02.1 amd64 2:1.02.145-4.1ubuntu2 [127 kB] Get:89 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libcryptsetup12 amd64 2:2.0.1-0ubuntu1 [134 kB] Get:90 http://ftpmaster.internal/ubuntu bionic/main amd64 libapparmor1 amd64 2.11.0-2ubuntu19 [28.8 kB] Get:91 http://ftpmaster.internal/ubuntu bionic/main amd64 libcap2 amd64 1:2.25-1.2 [13.0 kB] Get:92 http://ftpmaster.internal/ubuntu bionic/main amd64 libidn11 amd64 1.33-2.1 [46.0 kB] Get:93 http://ftpmaster.internal/ubuntu bionic/main amd64 libip4tc0 amd64 1.6.1-2ubuntu2 [19.6 kB] Get:94 http://ftpmaster.internal/ubuntu bionic/main amd64 libkmod2 amd64 24-1ubuntu3 [40.1 kB] Get:95 http://ftpmaster.internal/ubuntu bionic/main amd64 mount amd64 2.30.2-0.1ubuntu1 [110 kB] Get:96 http://ftpmaster.internal/ubuntu bionic/main amd64 libprocps6 amd64 2:3.3.12-3ubuntu1 [31.4 kB] Get:97 http://ftpmaster.internal/ubuntu bionic/main amd64 lsb-base all 9.20170808ubuntu1 [12.5 kB] Get:98 http://ftpmaster.internal/ubuntu bionic/main amd64 procps amd64 2:3.3.12-3ubuntu1 [225 kB] Get:99 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 systemd amd64 237-1ubuntu2 [2898 kB] Get:100 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libsystemd0 amd64 237-1ubuntu2 [206 kB] Get:101 http://ftpmaster.internal/ubuntu bionic/main amd64 init amd64 1.51 [5864 B] Get:102 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 systemd-sysv amd64 237-1ubuntu2 [12.6 kB] Get:103 http://ftpmaster.internal/ubuntu bionic/main amd64 libcap-ng0 amd64 0.7.7-3.1 [11.1 kB] Get:104 http://ftpmaster.internal/ubuntu bionic/main amd64 libcomerr2 amd64 1.43.8-2 [11.2 kB] Get:105 http://ftpmaster.internal/ubuntu bionic/main amd64 libss2 amd64 1.43.8-2 [11.1 kB] Get:106 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 multiarch-support amd64 2.26-0ubuntu4 [6912 B] Get:107 http://ftpmaster.internal/ubuntu bionic/main amd64 sensible-utils all 0.0.11 [14.8 kB] Get:108 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gnupg-l10n all 2.2.4-1ubuntu1 [48.6 kB] Get:109 http://ftpmaster.internal/ubuntu bionic/main amd64 libassuan0 amd64 2.5.1-1 [35.0 kB] Get:110 http://ftpmaster.internal/ubuntu bionic/main amd64 readline-common all 7.0-3 [52.9 kB] Get:111 http://ftpmaster.internal/ubuntu bionic/main amd64 libreadline7 amd64 7.0-3 [124 kB] Get:112 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gnupg amd64 2.2.4-1ubuntu1 [249 kB] Get:113 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gnupg-agent all 2.2.4-1ubuntu1 [4544 B] Get:114 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gpgconf amd64 2.2.4-1ubuntu1 [122 kB] Get:115 http://ftpmaster.internal/ubuntu bionic/main amd64 pinentry-curses amd64 1.0.0-3 [34.7 kB] Get:116 http://ftpmaster.internal/ubuntu bionic/main amd64 libnpth0 amd64 1.5-3 [7668 B] Get:117 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gpg-agent amd64 2.2.4-1ubuntu1 [227 kB] Get:118 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gnupg-utils amd64 2.2.4-1ubuntu1 [126 kB] Get:119 http://ftpmaster.internal/ubuntu bionic/main amd64 libsqlite3-0 amd64 3.22.0-1 [496 kB] Get:120 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gpg amd64 2.2.4-1ubuntu1 [467 kB] Get:121 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gpg-wks-client amd64 2.2.4-1ubuntu1 [91.7 kB] Get:122 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gpg-wks-server amd64 2.2.4-1ubuntu1 [84.9 kB] Get:123 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 gpgsm amd64 2.2.4-1ubuntu1 [215 kB] Get:124 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 dirmngr amd64 2.2.4-1ubuntu1 [316 kB] Get:125 http://ftpmaster.internal/ubuntu bionic/main amd64 dmsetup amd64 2:1.02.145-4.1ubuntu2 [74.3 kB] Get:126 http://ftpmaster.internal/ubuntu bionic/main amd64 libroken18-heimdal amd64 7.5.0+dfsg-1 [41.3 kB] Get:127 http://ftpmaster.internal/ubuntu bionic/main amd64 libasn1-8-heimdal amd64 7.5.0+dfsg-1 [175 kB] Get:128 http://ftpmaster.internal/ubuntu bionic/main amd64 libheimbase1-heimdal amd64 7.5.0+dfsg-1 [29.3 kB] Get:129 http://ftpmaster.internal/ubuntu bionic/main amd64 libhcrypto4-heimdal amd64 7.5.0+dfsg-1 [85.9 kB] Get:130 http://ftpmaster.internal/ubuntu bionic/main amd64 libwind0-heimdal amd64 7.5.0+dfsg-1 [47.8 kB] Get:131 http://ftpmaster.internal/ubuntu bionic/main amd64 libhx509-5-heimdal amd64 7.5.0+dfsg-1 [107 kB] Get:132 http://ftpmaster.internal/ubuntu bionic/main amd64 libkrb5-26-heimdal amd64 7.5.0+dfsg-1 [206 kB] Get:133 http://ftpmaster.internal/ubuntu bionic/main amd64 libheimntlm0-heimdal amd64 7.5.0+dfsg-1 [14.8 kB] Get:134 http://ftpmaster.internal/ubuntu bionic/main amd64 libgssapi3-heimdal amd64 7.5.0+dfsg-1 [96.5 kB] Get:135 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libsasl2-modules-db amd64 2.1.27~101-g0780600+dfsg-3ubuntu2 [14.8 kB] Get:136 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libsasl2-2 amd64 2.1.27~101-g0780600+dfsg-3ubuntu2 [49.2 kB] Get:137 http://ftpmaster.internal/ubuntu bionic/main amd64 libslang2 amd64 2.3.1a-1ubuntu1 [422 kB] Get:138 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libssl1.0.0 amd64 1.0.2n-1ubuntu2 [1087 kB] Get:139 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libssl1.1 amd64 1.1.0g-2ubuntu1 [1128 kB] Get:140 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 openssl amd64 1.1.0g-2ubuntu1 [532 kB] Get:141 http://ftpmaster.internal/ubuntu bionic/main amd64 tzdata all 2018c-1 [188 kB] Get:142 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libgssapi-krb5-2 amd64 1.16-2build1 [122 kB] Get:143 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libkrb5-3 amd64 1.16-2build1 [279 kB] Get:144 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libk5crypto3 amd64 1.16-2build1 [85.6 kB] Get:145 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amd64 libnghttp2-14 amd64 1.29.0-1build1 [77.5 kB] Get:155 http://ftpmaster.internal/ubuntu bionic/main amd64 libpsl5 amd64 0.19.1-4 [41.2 kB] Get:156 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libcurl3-gnutls amd64 7.58.0-2ubuntu1 [212 kB] Get:157 http://ftpmaster.internal/ubuntu bionic/main amd64 liblockfile-bin amd64 1.14-1.1 [11.9 kB] Get:158 http://ftpmaster.internal/ubuntu bionic/main amd64 liblockfile1 amd64 1.14-1.1 [6804 B] Get:159 http://ftpmaster.internal/ubuntu bionic/main amd64 optipng amd64 0.7.6-1.1 [83.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 69.9 MB in 2s (30.7 MB/s) (Reading database ... 12676 files and directories currently installed.) 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Setting up libheimbase1-heimdal:amd64 (7.5.0+dfsg-1) ... Setting up libfakeroot:amd64 (1.22-2ubuntu1) ... Setting up openssl (1.1.0g-2ubuntu1) ... Installing new version of config file /etc/ssl/openssl.cnf ... Setting up libsqlite3-0:amd64 (3.22.0-1) ... Setting up dmsetup (2:1.02.145-4.1ubuntu2) ... Setting up libmpc3:amd64 (1.1.0-1) ... Setting up libc-dev-bin (2.26-0ubuntu4) ... Setting up libkeyutils1:amd64 (1.5.9-9.2ubuntu1) ... Setting up libc6-dev:amd64 (2.26-0ubuntu4) ... Setting up libslang2:amd64 (2.3.1a-1ubuntu1) ... Setting up libassuan0:amd64 (2.5.1-1) ... Setting up libitm1:amd64 (7.3.0-1ubuntu1) ... Setting up libk5crypto3:amd64 (1.16-2build1) ... Setting up libwind0-heimdal:amd64 (7.5.0+dfsg-1) ... Setting up libbinutils:amd64 (2.30-2ubuntu1) ... Setting up init (1.51) ... Setting up libasn1-8-heimdal:amd64 (7.5.0+dfsg-1) ... Setting up gpgconf (2.2.4-1ubuntu1) ... Setting up libhcrypto4-heimdal:amd64 (7.5.0+dfsg-1) ... Setting up fakeroot (1.22-2ubuntu1) ... 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Setting up gnupg-agent (2.2.4-1ubuntu1) ... Setting up libgssapi3-heimdal:amd64 (7.5.0+dfsg-1) ... Setting up gcc-7 (7.3.0-1ubuntu1) ... Setting up g++-7 (7.3.0-1ubuntu1) ... Setting up libcurl3-gnutls:amd64 (7.58.0-2ubuntu1) ... Setting up gnupg (2.2.4-1ubuntu1) ... Setting up dpkg-dev (1.19.0.5ubuntu1) ... Setting up build-essential (12.4ubuntu1) ... Processing triggers for libc-bin (2.26-0ubuntu4) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-14314967 amd64 bionic-proposed -c chroot:build-PACKAGEBUILD-14314967 --arch=amd64 --dist=bionic-proposed --nolog -A logol_1.7.7-1build1.dsc Initiating build PACKAGEBUILD-14314967 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-101-generic #124-Ubuntu SMP Fri Nov 10 18:29:59 UTC 2017 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-010.buildd +==============================================================================+ | logol 1.7.7-1build1 (amd64) 06 Feb 2018 01:59 | +==============================================================================+ Package: logol Version: 1.7.7-1build1 Source Version: 1.7.7-1build1 Distribution: bionic-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/logol-z4D6es/logol-1.7.7' with '<>' I: NOTICE: Log filtering will replace 'build/logol-z4D6es' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-14314967/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- logol_1.7.7-1build1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-TlWh9I/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-TlWh9I/apt_archive ./ InRelease Get:2 copy:/<>/resolver-TlWh9I/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-TlWh9I/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-TlWh9I/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-TlWh9I/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (46.7 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: gnupg-agent libcryptsetup4 libcurl3-gnutls libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libnghttp2-14 libpsl5 librtmp1 libssl1.0.0 libustr-1.0-1 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-TlWh9I/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (45.6 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12951 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 10), default-jdk, ant, ruby, gawk, swi-prolog (>= 6.4.1-3), libbiojava-java, antlr3, libcommons-cli-java, libcommons-collections3-java, libcommons-configuration-java, libcommons-lang-java, libcommons-logging-java, libxalan2-java, libxerces2-java, junit4, libmail-java, liblog4j1.2-java, texlive, texlive-latex-extra, tex4ht, libncursesw5-dev, ant-optional, cassiopee, ruby-cassiopee Filtered Build-Depends: debhelper (>= 10), default-jdk, ant, ruby, gawk, swi-prolog (>= 6.4.1-3), libbiojava-java, antlr3, libcommons-cli-java, libcommons-collections3-java, libcommons-configuration-java, libcommons-lang-java, libcommons-logging-java, libxalan2-java, libxerces2-java, junit4, libmail-java, liblog4j1.2-java, texlive, texlive-latex-extra, tex4ht, libncursesw5-dev, ant-optional, cassiopee, ruby-cassiopee dpkg-deb: building package 'sbuild-build-depends-logol-dummy' in '/<>/resolver-7bVVW6/apt_archive/sbuild-build-depends-logol-dummy.deb'. Ign:1 copy:/<>/resolver-7bVVW6/apt_archive ./ InRelease Get:2 copy:/<>/resolver-7bVVW6/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-7bVVW6/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-7bVVW6/apt_archive ./ Sources [377 B] Get:5 copy:/<>/resolver-7bVVW6/apt_archive ./ Packages [702 B] Fetched 3198 B in 0s (80.9 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install logol build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: gnupg-agent libcryptsetup4 libcurl3-gnutls libnghttp2-14 libpsl5 librtmp1 libustr-1.0-1 Use 'apt autoremove' to remove them. The following additional packages will be installed: adwaita-icon-theme ant ant-optional antlr3 autoconf automake autopoint autotools-dev bsdmainutils ca-certificates-java cassiopee debhelper default-jdk default-jdk-headless default-jre default-jre-headless dh-autoreconf dh-strip-nondeterminism file fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gawk gettext gettext-base groff-base gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme intltool-debian java-common junit4 libantlr3-runtime-java libapache-pom-java libarchive-zip-perl libarchive13 libasound2 libasound2-data libasyncns0 libatk-bridge2.0-0 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libbiojava-java libbiojava1.7-java libboost-serialization1.65.1 libbsd-dev libbsd0 libbytecode-java libcairo2 libcassie1v5 libcommons-cli-java libcommons-collections3-java libcommons-configuration-java libcommons-dbcp-java libcommons-lang-java libcommons-logging-java libcommons-parent-java libcommons-pool-java libcroco3 libcups2 libcupsimage2 libdatrie1 libdbus-1-3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit-dev libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libflac8 libfontconfig1 libfontenc1 libfreetype6 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgflags2.2 libgif7 libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libglib2.0-0 libgmp-dev libgmpxx4ldbl libgoogle-glog0v5 libgraphite2-3 libgs9 libgs9-common libgtk2.0-0 libgtk2.0-common libhamcrest-java libharfbuzz-icu0 libharfbuzz0b libhsqldb-java libice6 libicu-le-hb0 libicu60 libijs-0.35 libjaxp1.3-java libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libjs-jquery libkpathsea6 liblcms2-2 libllvm5.0 liblog4j1.2-java liblzo2-2 libmagic-mgc libmagic1 libmail-java libncurses5-dev libncursesw5-dev libnspr4 libnss3 libogg0 libossp-uuid16 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpciaccess0 libpcsclite1 libpipeline1 libpixman-1-0 libpoppler73 libpotrace0 libptexenc1 libpulse0 libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libreadline-dev librsvg2-2 librsvg2-common libruby2.3 libsensors4 libservlet3.1-java libsigsegv2 libsm6 libsndfile1 libstringtemplate4-java libsynctex1 libtexlua52 libtexluajit2 libthai-data libthai0 libtiff5 libtimedate-perl libtinfo-dev libtool libunwind8 libvorbis0a libvorbisenc2 libwrap0 libx11-6 libx11-data libx11-xcb1 libxalan2-java libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 libxmu6 libxmuu1 libxpm4 libxrandr2 libxrender1 libxshmfence1 libxt6 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 libyaml-0-2 libzzip-0-13 m4 man-db mime-support openjdk-8-jdk openjdk-8-jdk-headless openjdk-8-jre openjdk-8-jre-headless po-debconf poppler-data preview-latex-style python python-minimal python2.7 python2.7-minimal rake ruby ruby-cassiopee ruby-did-you-mean ruby-minitest ruby-net-telnet ruby-power-assert ruby-test-unit ruby-text ruby2.3 rubygems-integration shared-mime-info swi-prolog swi-prolog-nox swi-prolog-x t1utils tex-common texlive texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures texlive-plain-generic ubuntu-mono ucf x11-common x11-utils xdg-utils Suggested packages: ant-doc ant-gcj ant-optional-gcj antlr javacc junit jython libbcel-java libbsf-java libcommons-net-java libjdepend-java libjsch-java liboro-java libregexp-java autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make dwz default-java-plugin gawk-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libasound2-plugins alsa-utils java-virtual-machine libjgrapht-java libbiojava-java-doc libcommons-collections3-java-doc libcommons-beanutils-java libcommons-codec-java libcommons-digester-java libcommons-jexl2-java libcommons-jxpath-java libcommons-vfs-java libcommons-dbcp-java-doc libgeronimo-jta-1.1-spec-java libcommons-lang-java-doc libavalon-framework-java libcommons-logging-java-doc libexcalibur-logkit-java cups-common gmp-doc libgmp10-doc libmpfr-dev gvfs libhsqldb-java-doc liblcms2-utils liblog4j1.2-java-doc libmail-java-doc ncurses-doc uuid pciutils pcscd pulseaudio readline-doc librsvg2-bin lm-sensors libtool-doc gfortran | fortran95-compiler gcj-jdk libxalan2-java-doc libxsltc-java libxerces2-java-doc libxml-commons-resolver1.1-java-doc m4-doc less www-browser apparmor openjdk-8-demo openjdk-8-source visualvm icedtea-8-plugin libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei fonts-wqy-zenhei fonts-indic libmail-box-perl poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum python-doc python-tk python2.7-doc binfmt-support ri ruby-dev bundler elpa-ediprolog gv | postscript-viewer perl-tk xpdf-reader | pdf-viewer texlive-fonts-recommended-doc texlive-latex-base-doc python-pygments icc-profiles libfile-which-perl libspreadsheet-parseexcel-perl texlive-latex-extra-doc texlive-latex-recommended-doc texlive-pstricks dot2tex prerex ruby-tcltk | libtcltk-ruby texlive-pictures-doc vprerex mesa-utils Recommended packages: libstringtemplate-java curl | wget | lynx at-spi2-core libcupsfilters1 dbus libarchive-cpio-perl libgdk-pixbuf2.0-bin libtxc-dxtn-s2tc | libtxc-dxtn-s2tc0 | libtxc-dxtn0 libglib2.0-data xdg-user-dirs fonts-droid-fallback libgail-common libgtk2.0-bin javascript-common libltdl-dev libxt-dev fonts-dejavu-extra libmail-sendmail-perl zip fonts-lato lmodern tex-gyre tipa tk libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-xserver-utils The following packages will be REMOVED: pkg-create-dbgsym* The following NEW packages will be installed: adwaita-icon-theme ant ant-optional antlr3 autoconf automake autopoint autotools-dev bsdmainutils ca-certificates-java cassiopee debhelper default-jdk default-jdk-headless default-jre default-jre-headless dh-autoreconf dh-strip-nondeterminism file fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gawk gettext gettext-base groff-base gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme intltool-debian java-common junit4 libantlr3-runtime-java libapache-pom-java libarchive-zip-perl libarchive13 libasound2 libasound2-data libasyncns0 libatk-bridge2.0-0 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libbiojava-java libbiojava1.7-java libboost-serialization1.65.1 libbsd-dev libbsd0 libbytecode-java libcairo2 libcassie1v5 libcommons-cli-java libcommons-collections3-java libcommons-configuration-java libcommons-dbcp-java libcommons-lang-java libcommons-logging-java libcommons-parent-java libcommons-pool-java libcroco3 libcups2 libcupsimage2 libdatrie1 libdbus-1-3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit-dev libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libflac8 libfontconfig1 libfontenc1 libfreetype6 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgflags2.2 libgif7 libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libglib2.0-0 libgmp-dev libgmpxx4ldbl libgoogle-glog0v5 libgraphite2-3 libgs9 libgs9-common libgtk2.0-0 libgtk2.0-common libhamcrest-java libharfbuzz-icu0 libharfbuzz0b libhsqldb-java libice6 libicu-le-hb0 libicu60 libijs-0.35 libjaxp1.3-java libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libjs-jquery libkpathsea6 liblcms2-2 libllvm5.0 liblog4j1.2-java liblzo2-2 libmagic-mgc libmagic1 libmail-java libncurses5-dev libncursesw5-dev libnspr4 libnss3 libogg0 libossp-uuid16 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpciaccess0 libpcsclite1 libpipeline1 libpixman-1-0 libpoppler73 libpotrace0 libptexenc1 libpulse0 libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libreadline-dev librsvg2-2 librsvg2-common libruby2.3 libsensors4 libservlet3.1-java libsigsegv2 libsm6 libsndfile1 libstringtemplate4-java libsynctex1 libtexlua52 libtexluajit2 libthai-data libthai0 libtiff5 libtimedate-perl libtinfo-dev libtool libunwind8 libvorbis0a libvorbisenc2 libwrap0 libx11-6 libx11-data libx11-xcb1 libxalan2-java libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 libxmu6 libxmuu1 libxpm4 libxrandr2 libxrender1 libxshmfence1 libxt6 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 libyaml-0-2 libzzip-0-13 m4 man-db mime-support openjdk-8-jdk openjdk-8-jdk-headless openjdk-8-jre openjdk-8-jre-headless po-debconf poppler-data preview-latex-style python python-minimal python2.7 python2.7-minimal rake ruby ruby-cassiopee ruby-did-you-mean ruby-minitest ruby-net-telnet ruby-power-assert ruby-test-unit ruby-text ruby2.3 rubygems-integration sbuild-build-depends-logol-dummy shared-mime-info swi-prolog swi-prolog-nox swi-prolog-x t1utils tex-common texlive texlive-base texlive-binaries texlive-fonts-recommended texlive-latex-base texlive-latex-extra texlive-latex-recommended texlive-pictures texlive-plain-generic ubuntu-mono ucf x11-common x11-utils xdg-utils 0 upgraded, 255 newly installed, 1 to remove and 0 not upgraded. Need to get 223 MB of archives. After this operation, 892 MB of additional disk space will be used. Get:1 copy:/<>/resolver-7bVVW6/apt_archive ./ sbuild-build-depends-logol-dummy 0.invalid.0 [1032 B] Get:2 http://ftpmaster.internal/ubuntu bionic/main amd64 libxau6 amd64 1:1.0.8-1 [8376 B] Get:3 http://ftpmaster.internal/ubuntu bionic/main amd64 libbsd0 amd64 0.8.7-1 [41.5 kB] Get:4 http://ftpmaster.internal/ubuntu bionic/main amd64 libxdmcp6 amd64 1:1.1.2-3 [10.7 kB] Get:5 http://ftpmaster.internal/ubuntu bionic/main amd64 libxcb1 amd64 1.12-1ubuntu1 [45.2 kB] Get:6 http://ftpmaster.internal/ubuntu bionic/main amd64 libx11-data all 2:1.6.4-3 [114 kB] Get:7 http://ftpmaster.internal/ubuntu bionic/main amd64 libx11-6 amd64 2:1.6.4-3 [572 kB] Get:8 http://ftpmaster.internal/ubuntu bionic/main amd64 libxext6 amd64 2:1.3.3-1 [29.4 kB] Get:9 http://ftpmaster.internal/ubuntu bionic/main amd64 groff-base amd64 1.22.3-9 [1144 kB] Get:10 http://ftpmaster.internal/ubuntu bionic/main amd64 bsdmainutils amd64 11.1.2ubuntu1 [181 kB] Get:11 http://ftpmaster.internal/ubuntu bionic/main amd64 libpipeline1 amd64 1.5.0-1 [25.3 kB] Get:12 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 man-db amd64 2.8.0-2 [1013 kB] Get:13 http://ftpmaster.internal/ubuntu bionic/main amd64 libexpat1 amd64 2.2.5-3 [80.2 kB] Get:14 http://ftpmaster.internal/ubuntu bionic/main amd64 libfreetype6 amd64 2.8.1-0.1ubuntu2 [334 kB] Get:15 http://ftpmaster.internal/ubuntu bionic/main amd64 ucf all 3.0036 [52.9 kB] Get:16 http://ftpmaster.internal/ubuntu bionic/main amd64 fonts-dejavu-core all 2.37-1 [1041 kB] Get:17 http://ftpmaster.internal/ubuntu bionic/main amd64 fontconfig-config all 2.12.6-0ubuntu1 [55.5 kB] Get:18 http://ftpmaster.internal/ubuntu bionic/main amd64 libfontconfig1 amd64 2.12.6-0ubuntu1 [136 kB] Get:19 http://ftpmaster.internal/ubuntu bionic/main amd64 fontconfig amd64 2.12.6-0ubuntu1 [169 kB] Get:20 http://ftpmaster.internal/ubuntu bionic/main amd64 libsigsegv2 amd64 2.12-1 [14.7 kB] Get:21 http://ftpmaster.internal/ubuntu bionic/main amd64 gawk amd64 1:4.1.4+dfsg-1 [401 kB] Get:22 http://ftpmaster.internal/ubuntu bionic/main amd64 libjpeg-turbo8 amd64 1.5.2-0ubuntu5 [110 kB] Get:23 http://ftpmaster.internal/ubuntu bionic/main amd64 liblzo2-2 amd64 2.08-1.2 [48.7 kB] Get:24 http://ftpmaster.internal/ubuntu bionic/main amd64 libogg0 amd64 1.3.2-1 [17.2 kB] Get:25 http://ftpmaster.internal/ubuntu bionic/main amd64 x11-common all 1:7.7+19ubuntu4 [21.7 kB] Get:26 http://ftpmaster.internal/ubuntu bionic/main amd64 libice6 amd64 2:1.0.9-2 [40.2 kB] Get:27 http://ftpmaster.internal/ubuntu bionic/main amd64 libsm6 amd64 2:1.2.2-1 [15.8 kB] Get:28 http://ftpmaster.internal/ubuntu bionic/main amd64 libxrender1 amd64 1:0.9.10-1 [18.7 kB] Get:29 http://ftpmaster.internal/ubuntu bionic/main amd64 libxft2 amd64 2.3.2-1 [36.1 kB] Get:30 http://ftpmaster.internal/ubuntu bionic/main amd64 libxinerama1 amd64 2:1.1.3-1 [7908 B] Get:31 http://ftpmaster.internal/ubuntu bionic/main amd64 libxshmfence1 amd64 1.2-1 [5042 B] Get:32 http://ftpmaster.internal/ubuntu bionic/main amd64 libxxf86dga1 amd64 2:1.1.4-1 [13.7 kB] Get:33 http://ftpmaster.internal/ubuntu bionic/main amd64 libxxf86vm1 amd64 1:1.1.4-1 [10.6 kB] Get:34 http://ftpmaster.internal/ubuntu bionic/main amd64 poppler-data all 0.4.8-2 [1479 kB] Get:35 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libpython2.7-minimal amd64 2.7.14-4build1 [338 kB] Get:36 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 python2.7-minimal amd64 2.7.14-4build1 [1298 kB] Get:37 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 python-minimal amd64 2.7.14-4 [28.0 kB] Get:38 http://ftpmaster.internal/ubuntu bionic/main amd64 mime-support all 3.60ubuntu1 [30.1 kB] Get:39 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libpython2.7-stdlib amd64 2.7.14-4build1 [1910 kB] Get:40 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 python2.7 amd64 2.7.14-4build1 [233 kB] Get:41 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libpython-stdlib amd64 2.7.14-4 [7540 B] Get:42 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 python amd64 2.7.14-4 [140 kB] Get:43 http://ftpmaster.internal/ubuntu bionic/main amd64 tex-common all 6.09 [33.0 kB] Get:44 http://ftpmaster.internal/ubuntu bionic/main amd64 libjbig0 amd64 2.1-3.1 [26.6 kB] Get:45 http://ftpmaster.internal/ubuntu bionic/main amd64 libmagic-mgc amd64 1:5.32-1 [184 kB] Get:46 http://ftpmaster.internal/ubuntu bionic/main amd64 libmagic1 amd64 1:5.32-1 [68.4 kB] Get:47 http://ftpmaster.internal/ubuntu bionic/main amd64 file amd64 1:5.32-1 [22.0 kB] Get:48 http://ftpmaster.internal/ubuntu bionic/main amd64 libdbus-1-3 amd64 1.12.2-1ubuntu1 [175 kB] Get:49 http://ftpmaster.internal/ubuntu bionic/main amd64 libelf1 amd64 0.170-0.3 [44.4 kB] Get:50 http://ftpmaster.internal/ubuntu bionic/main amd64 libglib2.0-0 amd64 2.54.1-1ubuntu1 [1163 kB] Get:51 http://ftpmaster.internal/ubuntu bionic/main amd64 libgraphite2-3 amd64 1.3.10-8 [77.9 kB] Get:52 http://ftpmaster.internal/ubuntu bionic/main amd64 libharfbuzz0b amd64 1.7.2-1 [232 kB] Get:53 http://ftpmaster.internal/ubuntu bionic/main amd64 libicu-le-hb0 amd64 1.0.3+git161113-4 [14.3 kB] Get:54 http://ftpmaster.internal/ubuntu bionic/main amd64 libicu60 amd64 60.2-3ubuntu1 [8066 kB] Get:55 http://ftpmaster.internal/ubuntu bionic/main amd64 libxml2 amd64 2.9.4+dfsg1-6.1ubuntu1 [662 kB] Get:56 http://ftpmaster.internal/ubuntu bionic/main amd64 libyaml-0-2 amd64 0.1.7-2ubuntu3 [47.2 kB] Get:57 http://ftpmaster.internal/ubuntu bionic/main amd64 shared-mime-info amd64 1.9-2 [426 kB] Get:58 http://ftpmaster.internal/ubuntu bionic/main amd64 gettext-base amd64 0.19.8.1-4ubuntu2 [49.6 kB] Get:59 http://ftpmaster.internal/ubuntu bionic/main amd64 libdrm-common all 2.4.89-1 [4940 B] Get:60 http://ftpmaster.internal/ubuntu bionic/main amd64 libdrm2 amd64 2.4.89-1 [31.1 kB] Get:61 http://ftpmaster.internal/ubuntu bionic/main amd64 libedit2 amd64 3.1-20170329-1 [76.9 kB] Get:62 http://ftpmaster.internal/ubuntu bionic/main amd64 libxmuu1 amd64 2:1.1.2-2 [9674 B] Get:63 http://ftpmaster.internal/ubuntu bionic/main amd64 hicolor-icon-theme all 0.17-1 [10.3 kB] Get:64 http://ftpmaster.internal/ubuntu bionic/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] Get:65 http://ftpmaster.internal/ubuntu bionic/main amd64 libtiff5 amd64 4.0.9-3 [152 kB] Get:66 http://ftpmaster.internal/ubuntu bionic/main amd64 libgdk-pixbuf2.0-common all 2.36.11-1 [4260 B] Get:67 http://ftpmaster.internal/ubuntu bionic/main amd64 libgdk-pixbuf2.0-0 amd64 2.36.11-1 [165 kB] Get:68 http://ftpmaster.internal/ubuntu bionic/main amd64 gtk-update-icon-cache amd64 3.22.26-2ubuntu1 [27.7 kB] Get:69 http://ftpmaster.internal/ubuntu bionic/main amd64 libpixman-1-0 amd64 0.34.0-2 [229 kB] Get:70 http://ftpmaster.internal/ubuntu bionic/main amd64 libxcb-render0 amd64 1.12-1ubuntu1 [14.8 kB] Get:71 http://ftpmaster.internal/ubuntu bionic/main amd64 libxcb-shm0 amd64 1.12-1ubuntu1 [5482 B] Get:72 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libcairo2 amd64 1.15.10-1 [580 kB] Get:73 http://ftpmaster.internal/ubuntu bionic/main amd64 libcroco3 amd64 0.6.12-2 [81.3 kB] Get:74 http://ftpmaster.internal/ubuntu bionic/main amd64 libthai-data all 0.1.27-1 [133 kB] Get:75 http://ftpmaster.internal/ubuntu bionic/main amd64 libdatrie1 amd64 0.2.10-6 [17.7 kB] Get:76 http://ftpmaster.internal/ubuntu bionic/main amd64 libthai0 amd64 0.1.27-1 [17.8 kB] Get:77 http://ftpmaster.internal/ubuntu bionic/main amd64 libpango-1.0-0 amd64 1.40.14-1 [153 kB] Get:78 http://ftpmaster.internal/ubuntu bionic/main amd64 libpangoft2-1.0-0 amd64 1.40.14-1 [33.0 kB] Get:79 http://ftpmaster.internal/ubuntu bionic/main amd64 libpangocairo-1.0-0 amd64 1.40.14-1 [20.8 kB] Get:80 http://ftpmaster.internal/ubuntu bionic/main amd64 librsvg2-2 amd64 2.40.20-2 [98.6 kB] Get:81 http://ftpmaster.internal/ubuntu bionic/main amd64 librsvg2-common amd64 2.40.20-2 [5124 B] Get:82 http://ftpmaster.internal/ubuntu bionic/main amd64 humanity-icon-theme all 0.6.14 [1250 kB] Get:83 http://ftpmaster.internal/ubuntu bionic/main amd64 ubuntu-mono all 16.10+18.04.20180122.1-0ubuntu1 [149 kB] Get:84 http://ftpmaster.internal/ubuntu bionic/main amd64 adwaita-icon-theme all 3.26.1-3ubuntu1 [3485 kB] Get:85 http://ftpmaster.internal/ubuntu bionic/main amd64 libnspr4 amd64 2:4.16-1ubuntu2 [112 kB] Get:86 http://ftpmaster.internal/ubuntu bionic/main amd64 libnss3 amd64 2:3.35-2ubuntu2 [1135 kB] Get:87 http://ftpmaster.internal/ubuntu bionic/main amd64 ca-certificates-java all 20170930 [12.0 kB] Get:88 http://ftpmaster.internal/ubuntu bionic/main amd64 java-common all 0.59ubuntu1 [7232 B] Get:89 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libavahi-common-data amd64 0.7-3.1ubuntu1 [22.3 kB] Get:90 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libavahi-common3 amd64 0.7-3.1ubuntu1 [21.6 kB] Get:91 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libavahi-client3 amd64 0.7-3.1ubuntu1 [25.3 kB] Get:92 http://ftpmaster.internal/ubuntu bionic/main amd64 libcups2 amd64 2.2.6-4 [211 kB] Get:93 http://ftpmaster.internal/ubuntu bionic/main amd64 liblcms2-2 amd64 2.9-1 [139 kB] Get:94 http://ftpmaster.internal/ubuntu bionic/main amd64 libpcsclite1 amd64 1.8.23-1 [21.3 kB] Get:95 http://ftpmaster.internal/ubuntu bionic/main amd64 libxi6 amd64 2:1.7.9-1 [29.2 kB] Get:96 http://ftpmaster.internal/ubuntu bionic/main amd64 libxtst6 amd64 2:1.2.3-1 [12.8 kB] Get:97 http://ftpmaster.internal/ubuntu bionic/main amd64 openjdk-8-jre-headless amd64 8u151-b12-1 [27.3 MB] Get:98 http://ftpmaster.internal/ubuntu bionic/main amd64 default-jre-headless amd64 2:1.8-59ubuntu1 [3680 B] Get:99 http://ftpmaster.internal/ubuntu bionic/universe amd64 ant all 1.9.9-6 [1913 kB] Get:100 http://ftpmaster.internal/ubuntu bionic/universe amd64 ant-optional all 1.9.9-6 [338 kB] Get:101 http://ftpmaster.internal/ubuntu bionic/universe amd64 libantlr3-runtime-java all 3.5.2-8 [164 kB] Get:102 http://ftpmaster.internal/ubuntu bionic/universe amd64 libstringtemplate4-java all 4.0.8-2 [225 kB] Get:103 http://ftpmaster.internal/ubuntu bionic/universe amd64 antlr3 all 3.5.2-8 [1140 kB] Get:104 http://ftpmaster.internal/ubuntu bionic/main amd64 m4 amd64 1.4.18-1 [197 kB] Get:105 http://ftpmaster.internal/ubuntu bionic/main amd64 autoconf all 2.69-11 [322 kB] Get:106 http://ftpmaster.internal/ubuntu bionic/main amd64 autotools-dev all 20171216.1 [39.7 kB] Get:107 http://ftpmaster.internal/ubuntu bionic/main amd64 automake all 1:1.15.1-3ubuntu1 [509 kB] Get:108 http://ftpmaster.internal/ubuntu bionic/main amd64 autopoint all 0.19.8.1-4ubuntu2 [412 kB] Get:109 http://ftpmaster.internal/ubuntu bionic/main amd64 libboost-serialization1.65.1 amd64 1.65.1+dfsg-0ubuntu4 [99.2 kB] Get:110 http://ftpmaster.internal/ubuntu bionic/universe amd64 libgflags2.2 amd64 2.2.1-1 [72.4 kB] Get:111 http://ftpmaster.internal/ubuntu bionic/main amd64 libunwind8 amd64 1.2.1-6 [47.6 kB] Get:112 http://ftpmaster.internal/ubuntu bionic/universe amd64 libgoogle-glog0v5 amd64 0.3.5-1 [50.5 kB] Get:113 http://ftpmaster.internal/ubuntu bionic/universe amd64 libcassie1v5 amd64 1.0.7-1 [37.4 kB] Get:114 http://ftpmaster.internal/ubuntu bionic/universe amd64 cassiopee amd64 1.0.7-1 [12.7 kB] Get:115 http://ftpmaster.internal/ubuntu bionic/main amd64 libtool all 2.4.6-2 [194 kB] Get:116 http://ftpmaster.internal/ubuntu bionic/main amd64 dh-autoreconf all 16 [15.8 kB] Get:117 http://ftpmaster.internal/ubuntu bionic/main amd64 libarchive-zip-perl all 1.60-1 [83.9 kB] Get:118 http://ftpmaster.internal/ubuntu bionic/main amd64 libfile-stripnondeterminism-perl all 0.040-1 [13.9 kB] Get:119 http://ftpmaster.internal/ubuntu bionic/main amd64 libtimedate-perl all 2.3000-2 [37.5 kB] Get:120 http://ftpmaster.internal/ubuntu bionic/main amd64 dh-strip-nondeterminism all 0.040-1 [5196 B] Get:121 http://ftpmaster.internal/ubuntu bionic/main amd64 gettext amd64 0.19.8.1-4ubuntu2 [1087 kB] Get:122 http://ftpmaster.internal/ubuntu bionic/main amd64 intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:123 http://ftpmaster.internal/ubuntu bionic/main amd64 po-debconf all 1.0.20 [232 kB] Get:124 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 debhelper all 11.1.4ubuntu1 [900 kB] Get:125 http://ftpmaster.internal/ubuntu bionic/main amd64 libgtk2.0-common all 2.24.31-4ubuntu1 [124 kB] Get:126 http://ftpmaster.internal/ubuntu bionic/main amd64 libatk1.0-data all 2.26.1-3 [3056 B] Get:127 http://ftpmaster.internal/ubuntu bionic/main amd64 libatk1.0-0 amd64 2.26.1-3 [43.9 kB] Get:128 http://ftpmaster.internal/ubuntu bionic/main amd64 libxcomposite1 amd64 1:0.4.4-2 [6988 B] Get:129 http://ftpmaster.internal/ubuntu bionic/main amd64 libxfixes3 amd64 1:5.0.3-1 [10.8 kB] Get:130 http://ftpmaster.internal/ubuntu bionic/main amd64 libxcursor1 amd64 1:1.1.15-1 [19.8 kB] Get:131 http://ftpmaster.internal/ubuntu bionic/main amd64 libxdamage1 amd64 1:1.1.4-3 [6934 B] Get:132 http://ftpmaster.internal/ubuntu bionic/main amd64 libxrandr2 amd64 2:1.5.1-1 [18.1 kB] Get:133 http://ftpmaster.internal/ubuntu bionic/main amd64 libgtk2.0-0 amd64 2.24.31-4ubuntu1 [1769 kB] Get:134 http://ftpmaster.internal/ubuntu bionic/main amd64 libglapi-mesa amd64 17.3.3-0ubuntu1 [23.1 kB] Get:135 http://ftpmaster.internal/ubuntu bionic/main amd64 libx11-xcb1 amd64 2:1.6.4-3 [9626 B] Get:136 http://ftpmaster.internal/ubuntu bionic/main amd64 libxcb-dri2-0 amd64 1.12-1ubuntu1 [6838 B] Get:137 http://ftpmaster.internal/ubuntu bionic/main amd64 libxcb-dri3-0 amd64 1.12-1ubuntu1 [5156 B] Get:138 http://ftpmaster.internal/ubuntu bionic/main amd64 libxcb-glx0 amd64 1.12-1ubuntu1 [22.3 kB] Get:139 http://ftpmaster.internal/ubuntu bionic/main amd64 libxcb-present0 amd64 1.12-1ubuntu1 [5436 B] Get:140 http://ftpmaster.internal/ubuntu bionic/main amd64 libxcb-sync1 amd64 1.12-1ubuntu1 [8746 B] Get:141 http://ftpmaster.internal/ubuntu bionic/main amd64 libdrm-amdgpu1 amd64 2.4.89-1 [18.9 kB] Get:142 http://ftpmaster.internal/ubuntu bionic/main amd64 libpciaccess0 amd64 0.13.4-1ubuntu1 [17.9 kB] Get:143 http://ftpmaster.internal/ubuntu bionic/main amd64 libdrm-intel1 amd64 2.4.89-1 [59.8 kB] Get:144 http://ftpmaster.internal/ubuntu bionic/main amd64 libdrm-nouveau2 amd64 2.4.89-1 [16.5 kB] Get:145 http://ftpmaster.internal/ubuntu bionic/main amd64 libdrm-radeon1 amd64 2.4.89-1 [21.7 kB] Get:146 http://ftpmaster.internal/ubuntu bionic/main amd64 libllvm5.0 amd64 1:5.0.1-2 [13.7 MB] Get:147 http://ftpmaster.internal/ubuntu bionic/main amd64 libsensors4 amd64 1:3.4.0-4 [28.8 kB] Get:148 http://ftpmaster.internal/ubuntu bionic/main amd64 libgl1-mesa-dri amd64 17.3.3-0ubuntu1 [5862 kB] Get:149 http://ftpmaster.internal/ubuntu bionic/main amd64 libgl1-mesa-glx amd64 17.3.3-0ubuntu1 [131 kB] Get:150 http://ftpmaster.internal/ubuntu bionic/main amd64 libatspi2.0-0 amd64 2.26.2-2 [59.9 kB] Get:151 http://ftpmaster.internal/ubuntu bionic/main amd64 libatk-bridge2.0-0 amd64 2.26.1-1 [57.5 kB] Get:152 http://ftpmaster.internal/ubuntu bionic/main amd64 libfontenc1 amd64 1:1.1.3-1 [13.9 kB] Get:153 http://ftpmaster.internal/ubuntu bionic/main amd64 libxt6 amd64 1:1.1.5-1 [160 kB] Get:154 http://ftpmaster.internal/ubuntu bionic/main amd64 libxmu6 amd64 2:1.1.2-2 [46.0 kB] Get:155 http://ftpmaster.internal/ubuntu bionic/main amd64 libxpm4 amd64 1:3.5.12-1 [34.0 kB] Get:156 http://ftpmaster.internal/ubuntu bionic/main amd64 libxaw7 amd64 2:1.0.13-1 [173 kB] Get:157 http://ftpmaster.internal/ubuntu bionic/main amd64 libxcb-shape0 amd64 1.12-1ubuntu1 [5864 B] Get:158 http://ftpmaster.internal/ubuntu bionic/main amd64 libxv1 amd64 2:1.0.11-1 [10.7 kB] Get:159 http://ftpmaster.internal/ubuntu bionic/main amd64 x11-utils amd64 7.7+3build1 [196 kB] Get:160 http://ftpmaster.internal/ubuntu bionic/main amd64 libatk-wrapper-java all 0.33.3-15 [34.3 kB] Get:161 http://ftpmaster.internal/ubuntu bionic/main amd64 libatk-wrapper-java-jni amd64 0.33.3-15 [27.3 kB] Get:162 http://ftpmaster.internal/ubuntu bionic/main amd64 libasound2-data all 1.1.3-5 [36.1 kB] Get:163 http://ftpmaster.internal/ubuntu bionic/main amd64 libasound2 amd64 1.1.3-5 [357 kB] Get:164 http://ftpmaster.internal/ubuntu bionic/main amd64 libgif7 amd64 5.1.4-1 [30.7 kB] Get:165 http://ftpmaster.internal/ubuntu bionic/main amd64 libasyncns0 amd64 0.8-6 [12.1 kB] Get:166 http://ftpmaster.internal/ubuntu bionic/main amd64 libflac8 amd64 1.3.2-1 [213 kB] Get:167 http://ftpmaster.internal/ubuntu bionic/main amd64 libvorbis0a amd64 1.3.5-4.1 [86.3 kB] Get:168 http://ftpmaster.internal/ubuntu bionic/main amd64 libvorbisenc2 amd64 1.3.5-4.1 [70.9 kB] Get:169 http://ftpmaster.internal/ubuntu bionic/main amd64 libsndfile1 amd64 1.0.28-4 [169 kB] Get:170 http://ftpmaster.internal/ubuntu bionic/main amd64 libwrap0 amd64 7.6.q-27 [46.3 kB] Get:171 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libpulse0 amd64 1:11.1-1ubuntu6 [266 kB] Get:172 http://ftpmaster.internal/ubuntu bionic/main amd64 openjdk-8-jre amd64 8u151-b12-1 [69.7 kB] Get:173 http://ftpmaster.internal/ubuntu bionic/main amd64 default-jre amd64 2:1.8-59ubuntu1 [982 B] Get:174 http://ftpmaster.internal/ubuntu bionic/main amd64 openjdk-8-jdk-headless amd64 8u151-b12-1 [8251 kB] Get:175 http://ftpmaster.internal/ubuntu bionic/main amd64 default-jdk-headless amd64 2:1.8-59ubuntu1 [1036 B] Get:176 http://ftpmaster.internal/ubuntu bionic/main amd64 openjdk-8-jdk amd64 8u151-b12-1 [462 kB] Get:177 http://ftpmaster.internal/ubuntu bionic/main amd64 default-jdk amd64 2:1.8-59ubuntu1 [974 B] Get:178 http://ftpmaster.internal/ubuntu bionic/main amd64 fonts-lmodern all 2.004.5-3 [4551 kB] Get:179 http://ftpmaster.internal/ubuntu bionic/universe amd64 libhamcrest-java all 1.3-6 [375 kB] Get:180 http://ftpmaster.internal/ubuntu bionic/universe amd64 junit4 all 4.12-6 [291 kB] Get:181 http://ftpmaster.internal/ubuntu bionic/universe amd64 libapache-pom-java all 18-1 [4720 B] Get:182 http://ftpmaster.internal/ubuntu bionic/main amd64 libarchive13 amd64 3.2.2-3.1 [289 kB] Get:183 http://ftpmaster.internal/ubuntu bionic/main amd64 libcommons-pool-java all 1.6-3 [104 kB] Get:184 http://ftpmaster.internal/ubuntu bionic/main amd64 libcommons-collections3-java all 3.2.2-1 [599 kB] Get:185 http://ftpmaster.internal/ubuntu bionic/main amd64 libcommons-dbcp-java all 1.4-5ubuntu2 [148 kB] Get:186 http://ftpmaster.internal/ubuntu bionic/main amd64 libservlet3.1-java all 8.5.21-1ubuntu1 [390 kB] Get:187 http://ftpmaster.internal/ubuntu bionic/universe amd64 libhsqldb-java all 2.4.0-2 [1621 kB] Get:188 http://ftpmaster.internal/ubuntu bionic/universe amd64 libbytecode-java all 0.92.svn.20090106-2 [89.1 kB] Get:189 http://ftpmaster.internal/ubuntu bionic/universe amd64 libbiojava1.7-java all 1:1.7.1-7 [3165 kB] Get:190 http://ftpmaster.internal/ubuntu bionic/universe amd64 libbiojava-java all 1:1.7.1-7 [46.3 kB] Get:191 http://ftpmaster.internal/ubuntu bionic/main amd64 libbsd-dev amd64 0.8.7-1 [150 kB] Get:192 http://ftpmaster.internal/ubuntu bionic/universe amd64 libcommons-cli-java all 1.4-1 [53.8 kB] Get:193 http://ftpmaster.internal/ubuntu bionic-proposed/universe amd64 libcommons-parent-java all 43-1 [10.8 kB] Get:194 http://ftpmaster.internal/ubuntu bionic/universe amd64 libcommons-lang-java all 2.6-7 [267 kB] Get:195 http://ftpmaster.internal/ubuntu bionic/universe amd64 libcommons-logging-java all 1.2-2 [60.3 kB] Get:196 http://ftpmaster.internal/ubuntu bionic/universe amd64 libcommons-configuration-java all 1.10-5 [328 kB] Get:197 http://ftpmaster.internal/ubuntu bionic/main amd64 libcupsimage2 amd64 2.2.6-4 [18.6 kB] Get:198 http://ftpmaster.internal/ubuntu bionic/main amd64 libtinfo-dev amd64 6.0+20171125-1ubuntu1 [81.0 kB] Get:199 http://ftpmaster.internal/ubuntu bionic/main amd64 libncurses5-dev amd64 6.0+20171125-1ubuntu1 [174 kB] Get:200 http://ftpmaster.internal/ubuntu bionic/main amd64 libedit-dev amd64 3.1-20170329-1 [99.1 kB] Get:201 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libgmpxx4ldbl amd64 2:6.1.2+dfsg-2 [8964 B] Get:202 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libgmp-dev amd64 2:6.1.2+dfsg-2 [316 kB] Get:203 http://ftpmaster.internal/ubuntu bionic/main amd64 libijs-0.35 amd64 0.35-12 [15.5 kB] Get:204 http://ftpmaster.internal/ubuntu bionic/main amd64 libjbig2dec0 amd64 0.13-5 [55.8 kB] Get:205 http://ftpmaster.internal/ubuntu bionic/main amd64 libpaper1 amd64 1.1.24+nmu5ubuntu1 [13.6 kB] Get:206 http://ftpmaster.internal/ubuntu bionic/main amd64 libgs9-common all 9.21~dfsg+1-0ubuntu3 [5121 kB] Get:207 http://ftpmaster.internal/ubuntu bionic/main amd64 libgs9 amd64 9.21~dfsg+1-0ubuntu3 [2187 kB] Get:208 http://ftpmaster.internal/ubuntu bionic/main amd64 libharfbuzz-icu0 amd64 1.7.2-1 [5604 B] Get:209 http://ftpmaster.internal/ubuntu bionic/universe amd64 libjaxp1.3-java all 1.3.05-5 [226 kB] Get:210 http://ftpmaster.internal/ubuntu bionic/main amd64 libjs-jquery all 3.2.1-1 [152 kB] Get:211 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libkpathsea6 amd64 2017.20170613.44572-8build1 [54.8 kB] Get:212 http://ftpmaster.internal/ubuntu bionic/universe amd64 liblog4j1.2-java all 1.2.17-8 [427 kB] Get:213 http://ftpmaster.internal/ubuntu bionic/universe amd64 libmail-java all 1.5.6-2 [629 kB] Get:214 http://ftpmaster.internal/ubuntu bionic/main amd64 libncursesw5-dev amd64 6.0+20171125-1ubuntu1 [199 kB] Get:215 http://ftpmaster.internal/ubuntu bionic/universe amd64 libossp-uuid16 amd64 1.6.2-1.5build4 [29.0 kB] Get:216 http://ftpmaster.internal/ubuntu bionic/main amd64 libpaper-utils amd64 1.1.24+nmu5ubuntu1 [8170 B] Get:217 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libpoppler73 amd64 0.62.0-1ubuntu1 [800 kB] Get:218 http://ftpmaster.internal/ubuntu bionic/main amd64 libpotrace0 amd64 1.14-2 [17.4 kB] Get:219 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 libptexenc1 amd64 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1:2.5~1 [5644 B] Get:239 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 rake all 12.3.0-1 [44.8 kB] Get:240 http://ftpmaster.internal/ubuntu bionic/universe amd64 ruby-text all 1.3.0-1 [13.1 kB] Get:241 http://ftpmaster.internal/ubuntu bionic/universe amd64 ruby-cassiopee all 0.1.13-1 [11.0 kB] Get:242 http://ftpmaster.internal/ubuntu bionic-proposed/universe amd64 swi-prolog-nox amd64 7.6.4+dfsg-1build1 [3352 kB] Get:243 http://ftpmaster.internal/ubuntu bionic-proposed/universe amd64 swi-prolog-x amd64 7.6.4+dfsg-1build1 [2010 kB] Get:244 http://ftpmaster.internal/ubuntu bionic-proposed/universe amd64 swi-prolog amd64 7.6.4+dfsg-1build1 [15.3 kB] Get:245 http://ftpmaster.internal/ubuntu bionic/main amd64 t1utils amd64 1.41-2 [56.0 kB] Get:246 http://ftpmaster.internal/ubuntu bionic-proposed/main amd64 texlive-binaries amd64 2017.20170613.44572-8build1 [8174 kB] Get:247 http://ftpmaster.internal/ubuntu bionic/main amd64 xdg-utils all 1.1.2-1ubuntu1 [60.6 kB] Get:248 http://ftpmaster.internal/ubuntu bionic/main amd64 texlive-base all 2017.20180110-1 [18.6 MB] Get:249 http://ftpmaster.internal/ubuntu bionic/universe amd64 texlive-fonts-recommended all 2017.20180110-1 [5264 kB] Get:250 http://ftpmaster.internal/ubuntu bionic/main amd64 texlive-latex-base all 2017.20180110-1 [950 kB] Get:251 http://ftpmaster.internal/ubuntu bionic/main amd64 texlive-latex-recommended all 2017.20180110-1 [14.9 MB] Get:252 http://ftpmaster.internal/ubuntu bionic/universe amd64 texlive all 2017.20180110-1 [14.4 kB] Get:253 http://ftpmaster.internal/ubuntu bionic/universe amd64 texlive-pictures all 2017.20180110-1 [4008 kB] Get:254 http://ftpmaster.internal/ubuntu bionic/universe amd64 texlive-latex-extra all 2017.20180110-1 [10.6 MB] Get:255 http://ftpmaster.internal/ubuntu bionic/universe amd64 texlive-plain-generic all 2017.20180110-1 [23.6 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 223 MB in 15s (15.0 MB/s) (Reading database 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Setting up libossp-uuid16:amd64 (1.6.2-1.5build4) ... Setting up java-common (0.59ubuntu1) ... Setting up libtinfo-dev:amd64 (6.0+20171125-1ubuntu1) ... Setting up libgdk-pixbuf2.0-common (2.36.11-1) ... Setting up libllvm5.0:amd64 (1:5.0.1-2) ... Setting up libdatrie1:amd64 (0.2.10-6) ... Setting up gettext-base (0.19.8.1-4ubuntu2) ... Setting up libgif7:amd64 (5.1.4-1) ... Setting up libjpeg-turbo8:amd64 (1.5.2-0ubuntu5) ... Setting up libpipeline1:amd64 (1.5.0-1) ... Setting up libglapi-mesa:amd64 (17.3.3-0ubuntu1) ... Setting up m4 (1.4.18-1) ... Setting up gawk (1:4.1.4+dfsg-1) ... Setting up libbsd0:amd64 (0.8.7-1) ... Setting up libantlr3-runtime-java (3.5.2-8) ... Setting up libnspr4:amd64 (2:4.16-1ubuntu2) ... Setting up ucf (3.0036) ... Setting up libboost-serialization1.65.1:amd64 (1.65.1+dfsg-0ubuntu4) ... Setting up libfreetype6:amd64 (2.8.1-0.1ubuntu2) ... Setting up libmagic-mgc (1:5.32-1) ... Setting up libasound2:amd64 (1.1.3-5) ... 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Setting up libcommons-pool-java (1.6-3) ... Processing triggers for systemd (237-1ubuntu2) ... Setting up libapache-pom-java (18-1) ... Setting up ruby-net-telnet (0.1.1-2) ... Setting up libreadline-dev:amd64 (7.0-3) ... Setting up libijs-0.35:amd64 (0.35-12) ... Setting up libfontenc1:amd64 (1:1.1.3-1) ... Setting up libstringtemplate4-java (4.0.8-2) ... Setting up rubygems-integration (1.11) ... Setting up libpciaccess0:amd64 (0.13.4-1ubuntu1) ... Setting up libpotrace0 (1.14-2) ... Setting up libsensors4:amd64 (1:3.4.0-4) ... Setting up libthai-data (0.1.27-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up bsdmainutils (11.1.2ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgmpxx4ldbl:amd64 (2:6.1.2+dfsg-2) ... Setting up ruby-minitest (5.10.3-1) ... Setting up libvorbis0a:amd64 (1.3.5-4.1) ... Setting up libzzip-0-13:amd64 (0.13.62-3.1) ... Setting up x11-common (1:7.7+19ubuntu4) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up xdg-utils (1.1.2-1ubuntu1) ... Processing triggers for ca-certificates (20170717) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Setting up hicolor-icon-theme (0.17-1) ... Setting up libtexluajit2:amd64 (2017.20170613.44572-8build1) ... Setting up libx11-data (2:1.6.4-3) ... Setting up libpython2.7-stdlib:amd64 (2.7.14-4build1) ... Setting up libhamcrest-java (1.3-6) ... Setting up libxau6:amd64 (1:1.0.8-1) ... Setting up autopoint (0.19.8.1-4ubuntu2) ... Setting up libdbus-1-3:amd64 (1.12.2-1ubuntu1) ... Setting up libcommons-cli-java (1.4-1) ... Setting up liblzo2-2:amd64 (2.08-1.2) ... Setting up fonts-lmodern (2.004.5-3) ... Setting up libwrap0:amd64 (7.6.q-27) ... Setting up ruby-power-assert (0.3.0-1) ... Setting up libavahi-common-data:amd64 (0.7-3.1ubuntu1) ... Setting up libfile-stripnondeterminism-perl (0.040-1) ... Setting up libjpeg8:amd64 (8c-2ubuntu8) ... Setting up libgmp-dev:amd64 (2:6.1.2+dfsg-2) ... Setting up libpaper1:amd64 (1.1.24+nmu5ubuntu1) ... Creating config file /etc/papersize with new version Setting up libpaper-utils (1.1.24+nmu5ubuntu1) ... Setting up fontconfig-config (2.12.6-0ubuntu1) ... Setting up tex-common (6.09) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libbsd-dev:amd64 (0.8.7-1) ... Setting up libflac8:amd64 (1.3.2-1) ... Setting up libhsqldb-java (2.4.0-2) ... Setting up python2.7 (2.7.14-4build1) ... Setting up libnss3:amd64 (2:3.35-2ubuntu2) ... Setting up libharfbuzz0b:amd64 (1.7.2-1) ... Setting up libtiff5:amd64 (4.0.9-3) ... Setting up preview-latex-style (11.91-1ubuntu1) ... Setting up autoconf (2.69-11) ... Setting up libthai0:amd64 (0.1.27-1) ... Setting up file (1:5.32-1) ... Setting up libcommons-dbcp-java (1.4-5ubuntu2) ... Setting up libdrm2:amd64 (2.4.89-1) ... Setting up libcommons-parent-java (43-1) ... Setting up libxerces2-java (2.11.0-8) ... Setting up libpython-stdlib:amd64 (2.7.14-4) ... Setting up libdrm-intel1:amd64 (2.4.89-1) ... Setting up libxalan2-java (2.7.2-1) ... Setting up libcassie1v5 (1.0.7-1) ... Setting up automake (1:1.15.1-3ubuntu1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up libice6:amd64 (2:1.0.9-2) ... Setting up libedit-dev:amd64 (3.1-20170329-1) ... Setting up man-db (2.8.0-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libavahi-common3:amd64 (0.7-3.1ubuntu1) ... Setting up libdrm-radeon1:amd64 (2.4.89-1) ... Setting up libvorbisenc2:amd64 (1.3.5-4.1) ... Setting up libdrm-nouveau2:amd64 (2.4.89-1) ... Setting up libcommons-lang-java (2.6-7) ... Setting up libxcb1:amd64 (1.12-1ubuntu1) ... Setting up python (2.7.14-4) ... Setting up libtool (2.4.6-2) ... Setting up libxcb-present0:amd64 (1.12-1ubuntu1) ... Setting up libfontconfig1:amd64 (2.12.6-0ubuntu1) ... Setting up libxcb-dri2-0:amd64 (1.12-1ubuntu1) ... Setting up libsm6:amd64 (2:1.2.2-1) ... Setting up libxcb-dri3-0:amd64 (1.12-1ubuntu1) ... Setting up libxcb-glx0:amd64 (1.12-1ubuntu1) ... Setting up libxcb-render0:amd64 (1.12-1ubuntu1) ... Setting up libdrm-amdgpu1:amd64 (2.4.89-1) ... Setting up libx11-6:amd64 (2:1.6.4-3) ... Setting up libgl1-mesa-dri:amd64 (17.3.3-0ubuntu1) ... Setting up libcommons-logging-java (1.2-2) ... Setting up libxmuu1:amd64 (2:1.1.2-2) ... Setting up libxcb-sync1:amd64 (1.12-1ubuntu1) ... Setting up libpoppler73:amd64 (0.62.0-1ubuntu1) ... Setting up libsndfile1:amd64 (1.0.28-4) ... Setting up cassiopee (1.0.7-1) ... Setting up libxcomposite1:amd64 (1:0.4.4-2) ... Setting up libxcb-shm0:amd64 (1.12-1ubuntu1) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxt6:amd64 (1:1.1.5-1) ... Setting up libxcb-shape0:amd64 (1.12-1ubuntu1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libavahi-client3:amd64 (0.7-3.1ubuntu1) ... Setting up libxft2:amd64 (2.3.2-1) ... Setting up fontconfig (2.12.6-0ubuntu1) ... Regenerating fonts cache... done. Setting up libcups2:amd64 (2.2.6-4) ... Setting up libcommons-configuration-java (1.10-5) ... Setting up libxdamage1:amd64 (1:1.1.4-3) ... Setting up libxext6:amd64 (2:1.3.3-1) ... Setting up libxfixes3:amd64 (1:5.0.3-1) ... Setting up libatspi2.0-0:amd64 (2.26.2-2) ... Setting up libpulse0:amd64 (1:11.1-1ubuntu6) ... Setting up libxtst6:amd64 (2:1.2.3-1) ... Setting up libxmu6:amd64 (2:1.1.2-2) ... Setting up libcupsimage2:amd64 (2.2.6-4) ... Setting up libxcursor1:amd64 (1:1.1.15-1) ... Setting up libxxf86dga1:amd64 (2:1.1.4-1) ... Setting up libpango-1.0-0:amd64 (1.40.14-1) ... Setting up libatk-bridge2.0-0:amd64 (2.26.1-1) ... Setting up libxv1:amd64 (2:1.0.11-1) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1) ... Setting up libgs9:amd64 (9.21~dfsg+1-0ubuntu3) ... Setting up libxrandr2:amd64 (2:1.5.1-1) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up libxaw7:amd64 (2:1.0.13-1) ... Setting up libcairo2:amd64 (1.15.10-1) ... Setting up libxinerama1:amd64 (2:1.1.3-1) ... Setting up libpangoft2-1.0-0:amd64 (1.40.14-1) ... Setting up libgl1-mesa-glx:amd64 (17.3.3-0ubuntu1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/mesa/ld.so.conf to provide /etc/ld.so.conf.d/x86_64-linux-gnu_GL.conf (x86_64-linux-gnu_gl_conf) in auto mode Setting up x11-utils (7.7+3build1) ... Setting up libpangocairo-1.0-0:amd64 (1.40.14-1) ... Setting up libatk-wrapper-java (0.33.3-15) ... Setting up libatk-wrapper-java-jni:amd64 (0.33.3-15) ... Setting up openjdk-8-jre-headless:amd64 (8u151-b12-1) ... update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/orbd to provide /usr/bin/orbd (orbd) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/servertool to provide /usr/bin/servertool (servertool) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/tnameserv to provide /usr/bin/tnameserv (tnameserv) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up ca-certificates-java (20170930) ... Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:AffirmTrust_Premium.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Swisscom_Root_EV_CA_2.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Camerfirma_Chambers_of_Commerce_Root.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:QuoVadis_Root_CA.pem Adding debian:Taiwan_GRCA.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:Sonera_Class_2_Root_CA.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem Adding debian:ISRG_Root_X1.pem Adding debian:AddTrust_Qualified_Certificates_Root.pem Adding debian:ACEDICOM_Root.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:EE_Certification_Centre_Root_CA.pem Adding debian:PSCProcert.pem Adding debian:CA_Disig_Root_R1.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Network_Solutions_Certificate_Authority.pem Adding debian:GlobalSign_Root_CA_-_R2.pem Adding debian:Camerfirma_Global_Chambersign_Root.pem Adding debian:Cybertrust_Global_Root.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:CNNIC_ROOT.pem Adding debian:Certum_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Certplus_Root_CA_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Comodo_Trusted_Services_root.pem Adding debian:OpenTrust_Root_CA_G2.pem Adding debian:ACCVRAIZ1.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TÜBİTAK_UEKAE_Kök_Sertifika_Hizmet_Sağlayıcısı_-_Sürüm_3.pem Adding debian:Certplus_Root_CA_G1.pem Adding debian:Visa_eCommerce_Root.pem Adding debian:Certigna.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:Trustis_FPS_Root_CA.pem Adding debian:thawte_Primary_Root_CA.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:OpenTrust_Root_CA_G3.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:AddTrust_Public_Services_Root.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:Deutsche_Telekom_Root_CA_2.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:Comodo_Secure_Services_root.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DST_Root_CA_X3.pem Adding debian:GeoTrust_Universal_CA_2.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:Global_Chambersign_Root_-_2008.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:AddTrust_Low-Value_Services_Root.pem Adding debian:TÜRKTRUST_Elektronik_Sertifika_Hizmet_Sağlayıcısı_H5.pem Adding debian:Certinomis_-_Root_CA.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Certplus_Class_2_Primary_CA.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:OpenTrust_Root_CA_G1.pem Adding debian:AffirmTrust_Networking.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:GeoTrust_Primary_Certification_Authority.pem Adding debian:thawte_Primary_Root_CA_-_G2.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:TURKTRUST_Certificate_Services_Provider_Root_2007.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:EC-ACC.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:AddTrust_External_Root.pem Adding debian:GeoTrust_Global_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:VeriSign_Universal_Root_Certification_Authority.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:GeoTrust_Universal_CA.pem Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem Adding debian:Certinomis_-_Autorité_Racine.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:Security_Communication_EV_RootCA1.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem Adding debian:thawte_Primary_Root_CA_-_G3.pem Adding debian:UTN_USERFirst_Hardware_Root_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:GeoTrust_Global_CA_2.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:Chambers_of_Commerce_Root_-_2008.pem Adding debian:SecureTrust_CA.pem Adding debian:Izenpe.com.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:China_Internet_Network_Information_Center_EV_Certificates_Root.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:DST_ACES_CA_X6.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:Swisscom_Root_CA_2.pem Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:SecureSign_RootCA11.pem Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem Adding debian:Swisscom_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:LuxTrust_Global_Root_2.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem done. Setting up dh-autoreconf (16) ... Setting up openjdk-8-jdk-headless:amd64 (8u151-b12-1) ... update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/idlj to provide /usr/bin/idlj (idlj) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/wsimport to provide /usr/bin/wsimport (wsimport) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jsadebugd to provide /usr/bin/jsadebugd (jsadebugd) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/native2ascii to provide /usr/bin/native2ascii (native2ascii) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/javah to provide /usr/bin/javah (javah) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/extcheck to provide /usr/bin/extcheck (extcheck) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/schemagen to provide /usr/bin/schemagen (schemagen) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/xjc to provide /usr/bin/xjc (xjc) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jhat to provide /usr/bin/jhat (jhat) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/wsgen to provide /usr/bin/wsgen (wsgen) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode Setting up libicu-le-hb0:amd64 (1.0.3+git161113-4) ... Setting up ruby2.3 (2.3.6-2) ... Setting up dh-strip-nondeterminism (0.040-1) ... Setting up ant (1.9.9-6) ... Setting up junit4 (4.12-6) ... Setting up antlr3 (3.5.2-8) ... Setting up ruby (1:2.5~1) ... Setting up default-jre-headless (2:1.8-59ubuntu1) ... Setting up default-jdk-headless (2:1.8-59ubuntu1) ... Setting up libicu60:amd64 (60.2-3ubuntu1) ... Setting up libharfbuzz-icu0:amd64 (1.7.2-1) ... Setting up ruby-test-unit (3.2.5-1) ... Setting up rake (12.3.0-1) ... Setting up ant-optional (1.9.9-6) ... Setting up texlive-binaries (2017.20170613.44572-8build1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libxml2:amd64 (2.9.4+dfsg1-6.1ubuntu1) ... Setting up libcroco3:amd64 (0.6.12-2) ... Setting up ruby-text (1.3.0-1) ... Setting up ruby-cassiopee (0.1.13-1) ... Setting up texlive-base (2017.20180110-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex Setting up shared-mime-info (1.9-2) ... Setting up texlive-fonts-recommended (2017.20180110-1) ... Setting up texlive-plain-generic (2017.20180110-1) ... Setting up libruby2.3:amd64 (2.3.6-2) ... Setting up texlive-latex-base (2017.20180110-1) ... Setting up texlive-latex-recommended (2017.20180110-1) ... Setting up gettext (0.19.8.1-4ubuntu2) ... Setting up libarchive13:amd64 (3.2.2-3.1) ... Setting up texlive-pictures (2017.20180110-1) ... Setting up libgdk-pixbuf2.0-0:amd64 (2.36.11-1) ... Setting up swi-prolog-nox (7.6.4+dfsg-1build1) ... update-alternatives: using /usr/bin/swipl to provide /usr/bin/prolog (prolog) in auto mode Setting up intltool-debian (0.35.0+20060710.4) ... Setting up gtk-update-icon-cache (3.22.26-2ubuntu1) ... Setting up texlive (2017.20180110-1) ... Setting up librsvg2-2:amd64 (2.40.20-2) ... Setting up texlive-latex-extra (2017.20180110-1) ... Setting up po-debconf (1.0.20) ... Setting up librsvg2-common:amd64 (2.40.20-2) ... Setting up swi-prolog-x (7.6.4+dfsg-1build1) ... Setting up swi-prolog (7.6.4+dfsg-1build1) ... Setting up adwaita-icon-theme (3.26.1-3ubuntu1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up debhelper (11.1.4ubuntu1) ... Setting up libgtk2.0-0:amd64 (2.24.31-4ubuntu1) ... Setting up humanity-icon-theme (0.6.14) ... Setting up openjdk-8-jre:amd64 (8u151-b12-1) ... update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/jre/bin/policytool to provide /usr/bin/policytool (policytool) in auto mode Setting up openjdk-8-jdk:amd64 (8u151-b12-1) ... update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/appletviewer to provide /usr/bin/appletviewer (appletviewer) in auto mode update-alternatives: using /usr/lib/jvm/java-8-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up ubuntu-mono (16.10+18.04.20180122.1-0ubuntu1) ... Setting up default-jre (2:1.8-59ubuntu1) ... Setting up default-jdk (2:1.8-59ubuntu1) ... Setting up libbytecode-java (0.92.svn.20090106-2) ... Setting up libbiojava1.7-java (1:1.7.1-7) ... Setting up libbiojava-java (1:1.7.1-7) ... Setting up sbuild-build-depends-logol-dummy (0.invalid.0) ... (Reading database ... 56819 files and directories currently installed.) Purging configuration files for pkg-create-dbgsym (0.73) ... Processing triggers for tex-common (6.09) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Processing triggers for libgdk-pixbuf2.0-0:amd64 (2.36.11-1) ... Processing triggers for libc-bin (2.26-0ubuntu4) ... Processing triggers for systemd (237-1ubuntu2) ... Processing triggers for ca-certificates (20170717) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-101-generic amd64 (x86_64) Toolchain package versions: binutils_2.30-2ubuntu1 dpkg-dev_1.19.0.5ubuntu1 g++-7_7.3.0-1ubuntu1 gcc-7_7.3.0-1ubuntu1 libc6-dev_2.26-0ubuntu4 libstdc++-7-dev_7.3.0-1ubuntu1 libstdc++6_7.3.0-1ubuntu1 linux-libc-dev_4.13.0-32.35 Package versions: adduser_3.116ubuntu1 advancecomp_2.0-1 adwaita-icon-theme_3.26.1-3ubuntu1 ant_1.9.9-6 ant-optional_1.9.9-6 antlr3_3.5.2-8 apt_1.6~alpha7ubuntu1 apt-transport-https_1.6~alpha7ubuntu1 autoconf_2.69-11 automake_1:1.15.1-3ubuntu1 autopoint_0.19.8.1-4ubuntu2 autotools-dev_20171216.1 base-files_10ubuntu1 base-passwd_3.5.44 bash_4.4-5ubuntu1 binutils_2.30-2ubuntu1 binutils-common_2.30-2ubuntu1 binutils-x86-64-linux-gnu_2.30-2ubuntu1 bsdmainutils_11.1.2ubuntu1 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poppler-data_0.4.8-2 preview-latex-style_11.91-1ubuntu1 procps_2:3.3.12-3ubuntu1 python_2.7.14-4 python-minimal_2.7.14-4 python2.7_2.7.14-4build1 python2.7-minimal_2.7.14-4build1 rake_12.3.0-1 readline-common_7.0-3 ruby_1:2.5~1 ruby-cassiopee_0.1.13-1 ruby-did-you-mean_1.0.0-2 ruby-minitest_5.10.3-1 ruby-net-telnet_0.1.1-2 ruby-power-assert_0.3.0-1 ruby-test-unit_3.2.5-1 ruby-text_1.3.0-1 ruby2.3_2.3.6-2 rubygems-integration_1.11 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-logol-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.11 shared-mime-info_1.9-2 swi-prolog_7.6.4+dfsg-1build1 swi-prolog-nox_7.6.4+dfsg-1build1 swi-prolog-x_7.6.4+dfsg-1build1 systemd_237-1ubuntu2 systemd-sysv_237-1ubuntu2 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu1 t1utils_1.41-2 tar_1.29b-2 tex-common_6.09 texlive_2017.20180110-1 texlive-base_2017.20180110-1 texlive-binaries_2017.20170613.44572-8build1 texlive-fonts-recommended_2017.20180110-1 texlive-latex-base_2017.20180110-1 texlive-latex-extra_2017.20180110-1 texlive-latex-recommended_2017.20180110-1 texlive-pictures_2017.20180110-1 texlive-plain-generic_2017.20180110-1 tzdata_2018c-1 ubuntu-keyring_2018.02.05 ubuntu-mono_16.10+18.04.20180122.1-0ubuntu1 ucf_3.0036 util-linux_2.30.2-0.1ubuntu1 x11-common_1:7.7+19ubuntu4 x11-utils_7.7+3build1 xdg-utils_1.1.2-1ubuntu1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Feb 6 01:56:31 2018 UTC gpgv: using RSA key 568D30F321B2133D gpgv: issuer "steve.langasek@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./logol_1.7.7-1build1.dsc dpkg-source: info: extracting logol in logol-1.7.7 dpkg-source: info: unpacking logol_1.7.7.orig.tar.bz2 dpkg-source: info: unpacking logol_1.7.7-1build1.debian.tar.xz dpkg-source: info: applying remove_drmaa_support dpkg-source: info: applying fixLibPath dpkg-source: info: applying setDebianDirs dpkg-source: info: applying fix_doc_generation dpkg-source: info: applying remove_rubygems_usage dpkg-source: info: applying fix_antlr35 dpkg-source: info: applying fix_swipl_declarations Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-14314967 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-14314967 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-14314967 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package logol dpkg-buildpackage: info: source version 1.7.7-1build1 dpkg-buildpackage: info: source distribution bionic dpkg-source --before-build logol-1.7.7 dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' if [ ! -e test/tmp ]; then mkdir -p test/tmp; fi if [ ! -e test/results ]; then mkdir -p test/results; fi dh_auto_clean ant clean Buildfile: /<>/build.xml [taskdef] Could not load definitions from resource tasks.properties. It could not be found. clean: BUILD SUCCESSFUL Total time: 0 seconds make[1]: Leaving directory '/<>' debian/rules override_dh_clean make[1]: Entering directory '/<>' if [ -e tools/pldoc.sty.upstream ]; then mv tools/pldoc.sty.upstream tools/pldoc.sty; fi if [ ! -e test/tmp ]; then mkdir -p test/tmp; fi if [ ! -e test/results ]; then mkdir -p test/results; fi dh_clean rm -f Swi*.xml rm -f prolog/*.exe rm -f lib/*.jar rm -f *.log rm -f src/org/irisa/genouest/logol/parser/* rm -f tools/suffixSearch.sh rm -rf test/tmp rm -rf test/results make[1]: Leaving directory '/<>' debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/<>' if [ ! -e lib ]; then mkdir -p lib; fi mv tools/pldoc.sty tools/pldoc.sty.upstream dh_auto_build -- -Dant.build.javac.source=1.5 -Dant.build.javac.target=1.5 ant -Duser.name debian -Dant.build.javac.source=1.5 -Dant.build.javac.target=1.5 Buildfile: /<>/build.xml [taskdef] Could not load definitions from resource tasks.properties. It could not be found. updatemod: setup: compile_swi_exe: [exec] CC="gcc" [exec] PLBASE="/usr/lib/swi-prolog" [exec] PLARCH="amd64" [exec] PLLIBS="" [exec] PLLIB="-lswipl" [exec] PLCFLAGS="-pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_GNU_SOURCE -D_DEFAULT_SOURCE -I/usr/include/ncursesw" [exec] PLLDFLAGS="-rdynamic -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/swi-prolog-bknMlt/swi-prolog-7.6.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -pthread" [exec] PLSOEXT="so" [exec] PLTHREADS="yes" [exec] logolSwiMain.c: In function ‘main’: [exec] logolSwiMain.c:50:4: warning: ignoring return value of ‘PL_put_string_chars’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_put_string_chars(ResultFile,argv[2]); [exec] ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [exec] logolSwiMain.c:52:4: warning: ignoring return value of ‘PL_next_solution’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_next_solution(query); [exec] ^~~~~~~~~~~~~~~~~~~~~~~ [exec] logolSwiMain.c:58:4: warning: ignoring return value of ‘PL_put_string_chars’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_put_string_chars(File,argv[1]); [exec] ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [exec] logolSwiMain.c:62:4: warning: ignoring return value of ‘PL_put_integer’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_put_integer(HeaderSize, header); [exec] ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [exec] logolSwiMain.c:67:4: warning: ignoring return value of ‘PL_next_solution’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_next_solution(query); [exec] ^~~~~~~~~~~~~~~~~~~~~~~ [exec] logolSwiMain.c:76:4: warning: ignoring return value of ‘PL_put_string_chars’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_put_string_chars(LogolFile,argv[6]); [exec] ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [exec] logolSwiMain.c:78:4: warning: ignoring return value of ‘PL_put_string_chars’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_put_string_chars(InFile,argv[1]); [exec] ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [exec] logolSwiMain.c:80:4: warning: ignoring return value of ‘PL_put_string_chars’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_put_string_chars(OutFile,argv[2]); [exec] ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [exec] logolSwiMain.c:82:4: warning: ignoring return value of ‘PL_put_integer’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_put_integer(Offset,offset); [exec] ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [exec] logolSwiMain.c:102:4: warning: ignoring return value of ‘PL_next_solution’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_next_solution(query); [exec] ^~~~~~~~~~~~~~~~~~~~~~~ [exec] logolSwiMain.c:120:4: warning: ignoring return value of ‘PL_put_string_chars’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_put_string_chars(ResultFile,argv[2]); [exec] ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [exec] logolSwiMain.c:122:4: warning: ignoring return value of ‘PL_next_solution’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_next_solution(query); [exec] ^~~~~~~~~~~~~~~~~~~~~~~ [exec] Warning: /<>/prolog/sicstus.pl:495: [exec] Singleton variables: [Before,Length,CountPos,CountLength] [exec] Warning: /<>/prolog/logol.pl:200: [exec] Singleton variables: [Max] [exec] Warning: /<>/prolog/logol.pl:215: [exec] Singleton variables: [Z] [exec] Warning: /<>/prolog/logol.pl:298: [exec] Singleton variables: [Tmp1,Tmp2,TmpOutput,Continue] [exec] Warning: /<>/prolog/logol.pl:298: [exec] Singleton variable in branch: Tmp1 [exec] Singleton variable in branch: Tmp2 [exec] Singleton variable in branch: TmpOutput [exec] Singleton variable in branch: Continue [exec] Warning: /<>/prolog/logol.pl:387: [exec] Singleton variables: [SequenceLength] [exec] Warning: /<>/prolog/logol.pl:401: [exec] Singleton variables: [Unique,Out,Exit] [exec] Warning: /<>/prolog/logol.pl:427: [exec] Singleton variables: [SequenceLength] [exec] Warning: /<>/prolog/logol.pl:465: [exec] Singleton variables: [NewPos] [exec] Warning: /<>/prolog/logol.pl:465: [exec] Singleton variable in branch: NewPos [exec] Warning: /<>/prolog/logol.pl:507: [exec] Singleton variables: [VARID,TYPE,REF,REFOTHER] [exec] Warning: /<>/prolog/logol.pl:510: [exec] Singleton variables: [VARID,TYPE,REF,REFOTHER] [exec] Warning: /<>/prolog/logol.pl:549: [exec] Singleton variables: [Z,Pred,Spacer,Min,Max,CountSpacer,NumberSpacer] [exec] Warning: /<>/prolog/logol.pl:568: [exec] Singleton variables: [Z,Pred,Spacer,CountSpacer,NumberSpacer] [exec] Warning: /<>/prolog/logol.pl:583: [exec] Singleton variables: [Tmp1,Tmp2,IntermediateSpacer,TmpOutput,Continue] [exec] Warning: /<>/prolog/logol.pl:583: [exec] Singleton variable in branch: Tmp1 [exec] Singleton variable in branch: Tmp2 [exec] Singleton variable in branch: IntermediateSpacer [exec] Singleton variable in branch: TmpOutput [exec] Singleton variable in branch: Continue [exec] Warning: /<>/prolog/logol.pl:666: [exec] Singleton variables: [InputLength] [exec] Warning: /<>/prolog/logol.pl:672: [exec] Singleton variables: [Pred,Z,PrevMatchLength,Count,OutCount] [exec] Warning: /<>/prolog/logol.pl:717: [exec] Singleton variables: [X,Y,E1,E2,N,Max,Z] [exec] Warning: /<>/prolog/logol.pl:957: [exec] Singleton variables: [Exit] [exec] Warning: /<>/prolog/logol.pl:986: [exec] Singleton variables: [Word] [exec] Warning: /<>/prolog/logol.pl:1017: [exec] Singleton variables: [N,Min,Max,Z] [exec] Warning: /<>/prolog/logol.pl:1061: [exec] Singleton variables: [E,Z,Spacer,CountSpacer,NumberSpacer] [exec] Warning: /<>/prolog/logol.pl:1155: [exec] Singleton variables: [Errors] [exec] Warning: /<>/prolog/logol.pl:1259: [exec] Singleton variables: [Morph,Reverse] [exec] Warning: /<>/prolog/logol.pl:1263: [exec] Singleton variables: [Morph] [exec] Warning: /<>/prolog/logol.pl:1274: [exec] Singleton variables: [Morph,Prev,CX,CZ] [exec] Warning: /<>/prolog/logol.pl:1310: [exec] Singleton variables: [Matrix,MatrixAtom] [exec] Warning: /<>/prolog/logol.pl:1334: [exec] Singleton variables: [Matrix,MatrixAtom] [exec] Warning: /<>/prolog/logol.pl:1638: [exec] Singleton variables: [Name] [exec] Warning: /<>/prolog/logol.pl:2029: [exec] Singleton variables: [Matrix] [exec] Warning: /<>/prolog/logol.pl:2070: [exec] Singleton variables: [Type] [exec] Warning: /<>/prolog/logol.pl:2173: [exec] Singleton variables: [Exit] [exec] Warning: /<>/prolog/logol.pl:2328: [exec] Singleton variables: [FilterPredicate] [exec] Warning: /<>/prolog/logol.pl:2343: [exec] Singleton variables: [Name,Content,Size,Level,Config] [exec] Warning: /<>/prolog/logol.pl:2373: [exec] Singleton variables: [Name,Content,Size,Level,Errors,Config] [exec] Warning: /<>/prolog/logol.pl:2388: [exec] Singleton variables: [Name,Content,Size,Info,Level,Errors,Config] [exec] Warning: /<>/prolog/logol.pl:2428: [exec] Singleton variables: [Z] [exec] Warning: /<>/prolog/logol.pl:2428: [exec] Singleton variable in branch: Max [exec] Singleton variable in branch: Z [exec] Warning: /<>/prolog/logol.pl:2463: [exec] Singleton variables: [VarId] [exec] Warning: /<>/prolog/logol.pl:2491: [exec] Singleton variables: [X,Y,Z] [exec] Warning: /<>/prolog/logol.pl:2509: [exec] Singleton variables: [MinSpacer,MaxSpacer,X,Y,Z] [exec] Warning: /<>/prolog/logol.pl:2527: [exec] Singleton variables: [ALPHABET] [exec] Warning: /<>/prolog/logol.pl:2569: [exec] Singleton variables: [MATCH,A,B,NEWID] [exec] Warning: /<>/prolog/logol.pl:2597: [exec] Singleton variables: [OPTVAR,ID] [exec] Warning: /<>/prolog/logol.pl:2601: [exec] Singleton variables: [OPTVAR,ID] [exec] Warning: /<>/prolog/logol.pl:2617: [exec] Singleton variables: [OPTVAR,ID,NEWID] [exec] Warning: /<>/prolog/logol.pl:2637: [exec] Singleton variables: [ID] [exec] Warning: /<>/prolog/logol.pl:2640: [exec] Singleton variables: [OPTVAR] [exec] Warning: /<>/prolog/logol.pl:2646: [exec] Singleton variables: [OPTVAR,ID,NEWID] [exec] Warning: /<>/prolog/logol.pl:2694: [exec] Singleton variables: [DATA] [exec] Warning: /<>/prolog/logol.pl:2745: [exec] Singleton variables: [MATCH] [exec] Warning: /<>/prolog/logol.pl:2748: [exec] Singleton variables: [MATCH] [exec] Warning: /<>/prolog/logol.pl:2751: [exec] Singleton variables: [MATCH] [exec] Warning: /<>/prolog/logol.pl:2754: [exec] Singleton variables: [MATCH,ALPHABET] [exec] Warning: /<>/prolog/logol.pl:2759: [exec] Singleton variables: [VAR,VARFOUND] [exec] Warning: /<>/prolog/logol.pl:2762: [exec] Singleton variables: [VAR,VARFOUND] [exec] % autoloading prolog_codewalk:must_be/2 from /usr/lib/swi-prolog/library/error [exec] % autoloading prolog_debug:backtrace/1 from /usr/lib/swi-prolog/library/prolog_stack [exec] % autoloading process:must_be/2 from /usr/lib/swi-prolog/library/error [exec] % autoloading process:maplist/3 from /usr/lib/swi-prolog/library/apply [exec] % autoloading process:existence_error/2 from /usr/lib/swi-prolog/library/error [exec] % autoloading sicstus:read_line_to_codes/2 from /usr/lib/swi-prolog/library/readutil [exec] % autoloading prolog_codewalk:portray_clause/1 from /usr/lib/swi-prolog/library/listing [exec] % autoloading prolog_codewalk:clause_info/4 from /usr/lib/swi-prolog/library/prolog_clause [exec] % autoloading prolog_codewalk:initialization_layout/4 from /usr/lib/swi-prolog/library/prolog_clause [exec] % autoloading qsave:current_foreign_library/2 from /usr/lib/swi-prolog/library/shlib [exec] % autoloading record:member/2 from /usr/lib/swi-prolog/library/lists [exec] % autoloading oset:reverse/2 from /usr/lib/swi-prolog/library/lists [exec] % autoloading error:assertion/1 from /usr/lib/swi-prolog/library/debug [exec] % autoloading prolog_codewalk:clause_name/2 from /usr/lib/swi-prolog/library/prolog_clause [exec] % Found new meta-predicates in iteration 1 (0.205 sec) [exec] % :- meta_predicate logol:callpred(0,*,*). [exec] % :- meta_predicate logol:notpred_pos(*,*,0,*,*,*). [exec] % Restarting analysis ... [exec] % Autoloader: iteration 1 resolved 9 predicates and loaded 14 files in 0.314 seconds. Restarting ... [exec] % Autoloader: loaded 9 files in 2 iterations in 0.406 seconds [exec] % halt [exec] eval `swipl --dump-runtime-variables` [exec] gcc -c -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_GNU_SOURCE -D_DEFAULT_SOURCE -I/usr/include/ncursesw -D_REENTRANT -D__SWI_PROLOG__ -D__SWI_EMBEDDED__ -I/usr/lib/swi-prolog/include -o logolSwiMain.o logolSwiMain.c [exec] gcc -o logol.exe -rdynamic -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/swi-prolog-bknMlt/swi-prolog-7.6.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -pthread logolSwiMain.o -L/usr/lib/swi-prolog/lib/amd64 -lswipl [exec] swipl -f none -F none -g true -t "consult(['sicstus.pl','logol.pl']),qsave_program('pltmp-10449',[goal=true,toplevel=prolog,init_file='swi-logol.pl'])" [exec] cat pltmp-10449 >> logol.exe [exec] chmod 775 logol.exe [exec] rm logolSwiMain.o [exec] rm pltmp-10449 [exec] CC="gcc" [exec] PLBASE="/usr/lib/swi-prolog" [exec] PLARCH="amd64" [exec] PLLIBS="" [exec] PLLIB="-lswipl" [exec] PLCFLAGS="-pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_GNU_SOURCE -D_DEFAULT_SOURCE -I/usr/include/ncursesw" [exec] PLLDFLAGS="-rdynamic -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/swi-prolog-bknMlt/swi-prolog-7.6.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -pthread" [exec] PLSOEXT="so" [exec] PLTHREADS="yes" [exec] preSwiMain.c: In function ‘main’: [exec] preSwiMain.c:40:4: warning: ignoring return value of ‘PL_put_string_chars’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_put_string_chars(LogolFile1,argv[1]); [exec] ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [exec] preSwiMain.c:42:4: warning: ignoring return value of ‘PL_put_string_chars’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_put_string_chars(LogolFile2,argv[1]); [exec] ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [exec] preSwiMain.c:44:4: warning: ignoring return value of ‘PL_put_string_chars’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_put_string_chars(LogolFile3,argv[1]); [exec] ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [exec] preSwiMain.c:46:4: warning: ignoring return value of ‘PL_put_string_chars’, declared with attribute warn_unused_result [-Wunused-result] [exec] PL_put_string_chars(LogolFile4,argv[1]); [exec] ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [exec] Warning: /<>/prolog/sicstus.pl:495: [exec] Singleton variables: [Before,Length,CountPos,CountLength] [exec] Warning: /<>/prolog/logol.pl:200: [exec] Singleton variables: [Max] [exec] Warning: /<>/prolog/logol.pl:215: [exec] Singleton variables: [Z] [exec] Warning: /<>/prolog/logol.pl:298: [exec] Singleton variables: [Tmp1,Tmp2,TmpOutput,Continue] [exec] Warning: /<>/prolog/logol.pl:298: [exec] Singleton variable in branch: Tmp1 [exec] Singleton variable in branch: Tmp2 [exec] Singleton variable in branch: TmpOutput [exec] Singleton variable in branch: Continue [exec] Warning: /<>/prolog/logol.pl:387: [exec] Singleton variables: [SequenceLength] [exec] Warning: /<>/prolog/logol.pl:401: [exec] Singleton variables: [Unique,Out,Exit] [exec] Warning: /<>/prolog/logol.pl:427: [exec] Singleton variables: [SequenceLength] [exec] Warning: /<>/prolog/logol.pl:465: [exec] Singleton variables: [NewPos] [exec] Warning: /<>/prolog/logol.pl:465: [exec] Singleton variable in branch: NewPos [exec] Warning: /<>/prolog/logol.pl:507: [exec] Singleton variables: [VARID,TYPE,REF,REFOTHER] [exec] Warning: /<>/prolog/logol.pl:510: [exec] Singleton variables: [VARID,TYPE,REF,REFOTHER] [exec] Warning: /<>/prolog/logol.pl:549: [exec] Singleton variables: [Z,Pred,Spacer,Min,Max,CountSpacer,NumberSpacer] [exec] Warning: /<>/prolog/logol.pl:568: [exec] Singleton variables: [Z,Pred,Spacer,CountSpacer,NumberSpacer] [exec] Warning: /<>/prolog/logol.pl:583: [exec] Singleton variables: [Tmp1,Tmp2,IntermediateSpacer,TmpOutput,Continue] [exec] Warning: /<>/prolog/logol.pl:583: [exec] Singleton variable in branch: Tmp1 [exec] Singleton variable in branch: Tmp2 [exec] Singleton variable in branch: IntermediateSpacer [exec] Singleton variable in branch: TmpOutput [exec] Singleton variable in branch: Continue [exec] Warning: /<>/prolog/logol.pl:666: [exec] Singleton variables: [InputLength] [exec] Warning: /<>/prolog/logol.pl:672: [exec] Singleton variables: [Pred,Z,PrevMatchLength,Count,OutCount] [exec] Warning: /<>/prolog/logol.pl:717: [exec] Singleton variables: [X,Y,E1,E2,N,Max,Z] [exec] Warning: /<>/prolog/logol.pl:957: [exec] Singleton variables: [Exit] [exec] Warning: /<>/prolog/logol.pl:986: [exec] Singleton variables: [Word] [exec] Warning: /<>/prolog/logol.pl:1017: [exec] Singleton variables: [N,Min,Max,Z] [exec] Warning: /<>/prolog/logol.pl:1061: [exec] Singleton variables: [E,Z,Spacer,CountSpacer,NumberSpacer] [exec] Warning: /<>/prolog/logol.pl:1155: [exec] Singleton variables: [Errors] [exec] Warning: /<>/prolog/logol.pl:1259: [exec] Singleton variables: [Morph,Reverse] [exec] Warning: /<>/prolog/logol.pl:1263: [exec] Singleton variables: [Morph] [exec] Warning: /<>/prolog/logol.pl:1274: [exec] Singleton variables: [Morph,Prev,CX,CZ] [exec] Warning: /<>/prolog/logol.pl:1310: [exec] Singleton variables: [Matrix,MatrixAtom] [exec] Warning: /<>/prolog/logol.pl:1334: [exec] Singleton variables: [Matrix,MatrixAtom] [exec] Warning: /<>/prolog/logol.pl:1638: [exec] Singleton variables: [Name] [exec] Warning: /<>/prolog/logol.pl:2029: [exec] Singleton variables: [Matrix] [exec] Warning: /<>/prolog/logol.pl:2070: [exec] Singleton variables: [Type] [exec] Warning: /<>/prolog/logol.pl:2173: [exec] Singleton variables: [Exit] [exec] Warning: /<>/prolog/logol.pl:2328: [exec] Singleton variables: [FilterPredicate] [exec] Warning: /<>/prolog/logol.pl:2343: [exec] Singleton variables: [Name,Content,Size,Level,Config] [exec] Warning: /<>/prolog/logol.pl:2373: [exec] Singleton variables: [Name,Content,Size,Level,Errors,Config] [exec] Warning: /<>/prolog/logol.pl:2388: [exec] Singleton variables: [Name,Content,Size,Info,Level,Errors,Config] [exec] Warning: /<>/prolog/logol.pl:2428: [exec] Singleton variables: [Z] [exec] Warning: /<>/prolog/logol.pl:2428: [exec] Singleton variable in branch: Max [exec] Singleton variable in branch: Z [exec] Warning: /<>/prolog/logol.pl:2463: [exec] Singleton variables: [VarId] [exec] Warning: /<>/prolog/logol.pl:2491: [exec] Singleton variables: [X,Y,Z] [exec] Warning: /<>/prolog/logol.pl:2509: [exec] Singleton variables: [MinSpacer,MaxSpacer,X,Y,Z] [exec] Warning: /<>/prolog/logol.pl:2527: [exec] Singleton variables: [ALPHABET] [exec] Warning: /<>/prolog/logol.pl:2569: [exec] Singleton variables: [MATCH,A,B,NEWID] [exec] Warning: /<>/prolog/logol.pl:2597: [exec] Singleton variables: [OPTVAR,ID] [exec] Warning: /<>/prolog/logol.pl:2601: [exec] Singleton variables: [OPTVAR,ID] [exec] Warning: /<>/prolog/logol.pl:2617: [exec] Singleton variables: [OPTVAR,ID,NEWID] [exec] Warning: /<>/prolog/logol.pl:2637: [exec] Singleton variables: [ID] [exec] Warning: /<>/prolog/logol.pl:2640: [exec] Singleton variables: [OPTVAR] [exec] Warning: /<>/prolog/logol.pl:2646: [exec] Singleton variables: [OPTVAR,ID,NEWID] [exec] Warning: /<>/prolog/logol.pl:2694: [exec] Singleton variables: [DATA] [exec] Warning: /<>/prolog/logol.pl:2745: [exec] Singleton variables: [MATCH] [exec] Warning: /<>/prolog/logol.pl:2748: [exec] Singleton variables: [MATCH] [exec] Warning: /<>/prolog/logol.pl:2751: [exec] Singleton variables: [MATCH] [exec] Warning: /<>/prolog/logol.pl:2754: [exec] Singleton variables: [MATCH,ALPHABET] [exec] Warning: /<>/prolog/logol.pl:2759: [exec] Singleton variables: [VAR,VARFOUND] [exec] Warning: /<>/prolog/logol.pl:2762: [exec] Singleton variables: [VAR,VARFOUND] [exec] % autoloading prolog_codewalk:must_be/2 from /usr/lib/swi-prolog/library/error [exec] % autoloading prolog_debug:backtrace/1 from /usr/lib/swi-prolog/library/prolog_stack [exec] % autoloading process:must_be/2 from /usr/lib/swi-prolog/library/error [exec] % autoloading process:maplist/3 from /usr/lib/swi-prolog/library/apply [exec] % autoloading process:existence_error/2 from /usr/lib/swi-prolog/library/error [exec] % autoloading sicstus:read_line_to_codes/2 from /usr/lib/swi-prolog/library/readutil [exec] % autoloading prolog_codewalk:portray_clause/1 from /usr/lib/swi-prolog/library/listing [exec] % autoloading prolog_codewalk:clause_info/4 from /usr/lib/swi-prolog/library/prolog_clause [exec] % autoloading prolog_codewalk:initialization_layout/4 from /usr/lib/swi-prolog/library/prolog_clause [exec] % autoloading qsave:current_foreign_library/2 from /usr/lib/swi-prolog/library/shlib [exec] % autoloading record:member/2 from /usr/lib/swi-prolog/library/lists [exec] % autoloading oset:reverse/2 from /usr/lib/swi-prolog/library/lists [exec] % autoloading error:assertion/1 from /usr/lib/swi-prolog/library/debug [exec] % autoloading prolog_codewalk:clause_name/2 from /usr/lib/swi-prolog/library/prolog_clause [exec] % Found new meta-predicates in iteration 1 (0.162 sec) [exec] % :- meta_predicate logol:callpred(0,*,*). [exec] % :- meta_predicate logol:notpred_pos(*,*,0,*,*,*). [exec] % Restarting analysis ... [exec] % Autoloader: iteration 1 resolved 9 predicates and loaded 14 files in 0.246 seconds. Restarting ... [exec] % Autoloader: loaded 9 files in 2 iterations in 0.334 seconds [exec] eval `swipl --dump-runtime-variables` [exec] gcc -c -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_GNU_SOURCE -D_DEFAULT_SOURCE -I/usr/include/ncursesw -D_REENTRANT -D__SWI_PROLOG__ -D__SWI_EMBEDDED__ -I/usr/lib/swi-prolog/include -o preSwiMain.o preSwiMain.c [exec] gcc -o preanalyse.exe -rdynamic -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/swi-prolog-bknMlt/swi-prolog-7.6.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -pthread preSwiMain.o -L/usr/lib/swi-prolog/lib/amd64 -lswipl [exec] swipl -f none -F none -g true -t "consult(['sicstus.pl','logol.pl']),qsave_program('pltmp-10466',[goal=true,toplevel=prolog,init_file='swi-logol.pl'])" [exec] cat pltmp-10466 >> preanalyse.exe [exec] chmod 775 preanalyse.exe [exec] rm preSwiMain.o [exec] rm pltmp-10466 [exec] % halt clean: antlr: [java] ANTLR Parser Generator Version 3.5.2 [java] /<>/src/logol.g compile: [mkdir] Created dir: /<>/bin [javac] /<>/build.xml:91: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds [javac] Compiling 62 source files to /<>/bin [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.5 [javac] warning: [options] source value 1.5 is obsolete and will be removed in a future release [javac] warning: [options] target value 1.5 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 4 warnings create-jar: [jar] Building jar: /<>/lib/LogolExec.jar test_swi: [mkdir] Created dir: /<>/test/tmp [mkdir] Created dir: /<>/test/results [exec] Warning: /<>/prolog/unitTest/swi-unit.pl:1: [exec] Singleton variables: [UnitPath,Lib] [exec] Warning: /<>/prolog/unitTest/swi-unit.pl:1: [exec] Goal (directive) failed: user:(prolog_flag(argv,[_3536,_3558,_3580,_3602,_3624,_3646,_3668,_3690,_3712,_3734]),ensure_loaded(_3646)) [exec] Warning: /<>/prolog/unitTest/swi-unit.pl:5: [exec] Singleton variables: [SicPath,Lib] [exec] Warning: /<>/prolog/unitTest/swi-unit.pl:5: [exec] Goal (directive) failed: user:(prolog_flag(argv,[_3536,_3558,_3580,_3602,_3624,_3646,_3668,_3690,_3712,_3734]),ensure_loaded(_3624)) [exec] Welcome to SWI-Prolog (threaded, 64 bits, version 7.6.4) [exec] SWI-Prolog comes with ABSOLUTELY NO WARRANTY. This is free software. [exec] Please run ?- license. for legal details. [exec] [exec] For online help and background, visit http://www.swi-prolog.org [exec] For built-in help, use ?- help(Topic). or ?- apropos(Word). [exec] [exec] % halt [exec] [junit] Running org.irisa.genouest.logol.test.GrammarTest [junit] Testsuite: org.irisa.genouest.logol.test.GrammarTest [junit] Tests run: 78, Failures: 0, Errors: 0, Skipped: 4, Time elapsed: 23.915 sec [junit] Tests run: 78, Failures: 0, Errors: 0, Skipped: 4, Time elapsed: 23.915 sec [junit] [junit] ------------- Standard Output --------------- [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/anyspacer.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/anyspacer.logol.988230b5-bd41-46d6-813d-99b95a2a43f4.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/anyspacer.logol.988230b5-bd41-46d6-813d-99b95a2a43f4.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/anyspacer.logol.988230b5-bd41-46d6-813d-99b95a2a43f4.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/repeat_overlap.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/repeat_overlap.logol.5fb26514-967f-46d0-ad03-bf12a768f67a.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/repeat_overlap.logol.5fb26514-967f-46d0-ad03-bf12a768f67a.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/repeat_overlap.logol.5fb26514-967f-46d0-ad03-bf12a768f67a.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/partialcomplement.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.Logol - option all called [junit] INFO org.irisa.genouest.logol.Logol - option offset called with 1000 [junit] INFO org.irisa.genouest.logol.Logol - option start called with 5 [junit] INFO org.irisa.genouest.logol.Logol - option end called with 35 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/partialcomplement.logol.2bc29a73-055f-4ccd-809b-ec9116457d41.1005-1035.xml: 0 [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/partialcomplement.logol.2bc29a73-055f-4ccd-809b-ec9116457d41.reverse.1005-1035.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/partialcomplement.logol.2bc29a73-055f-4ccd-809b-ec9116457d41.5-35-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/partialcomplement.logol.2bc29a73-055f-4ccd-809b-ec9116457d41.5-35-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/alphabet.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/alphabet.logol.bf76bafc-bf45-43d3-9810-eb2be7c95483.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/alphabet.logol.bf76bafc-bf45-43d3-9810-eb2be7c95483.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/alphabet.logol.bf76bafc-bf45-43d3-9810-eb2be7c95483.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/optimal.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/optimal.logol.8bf4f92a-6577-4cb8-93ec-b89288e62a04.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/optimal.logol.8bf4f92a-6577-4cb8-93ec-b89288e62a04.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/optimal.logol.8bf4f92a-6577-4cb8-93ec-b89288e62a04.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/repeat_startspacer.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/repeat_startspacer.logol.6f1860f3-f8d8-47cb-9082-18631188c2a7.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/repeat_startspacer.logol.6f1860f3-f8d8-47cb-9082-18631188c2a7.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/repeat_startspacer.logol.6f1860f3-f8d8-47cb-9082-18631188c2a7.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/overlap.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/overlap.logol.f70540cc-b899-419f-9e22-0b23e427cc89.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/overlap.logol.f70540cc-b899-419f-9e22-0b23e427cc89.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/overlap.logol.f70540cc-b899-419f-9e22-0b23e427cc89.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/end.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/end.logol.fbfdecbc-f192-4b1a-af23-558aa5811f02.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/end.logol.fbfdecbc-f192-4b1a-af23-558aa5811f02.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/end.logol.fbfdecbc-f192-4b1a-af23-558aa5811f02.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/negcontent.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/negcontent.logol.b769475a-7c6a-451c-a7e9-7a3130f938d6.1-41.xml: 2 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 2 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/negcontent.logol.b769475a-7c6a-451c-a7e9-7a3130f938d6.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/negcontent.logol.b769475a-7c6a-451c-a7e9-7a3130f938d6.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/begin.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/begin.logol.2b52f118-7deb-42e6-9cb3-410b1b0b003c.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/begin.logol.2b52f118-7deb-42e6-9cb3-410b1b0b003c.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/begin.logol.2b52f118-7deb-42e6-9cb3-410b1b0b003c.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/1799.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/1799.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/1799.logol.1cabfa72-293a-4f1e-b36f-5a6555d3e692.1-4.xml: 3 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 3 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/1799.logol.1cabfa72-293a-4f1e-b36f-5a6555d3e692.0-4-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/1799.logol.1cabfa72-293a-4f1e-b36f-5a6555d3e692.0-4-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/1800.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/1800.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/1800.logol.90730014-9cbd-465b-8833-738e5c462dc9.1-19.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/1800.logol.90730014-9cbd-465b-8833-738e5c462dc9.0-19-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/1800.logol.90730014-9cbd-465b-8833-738e5c462dc9.0-19-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/1806.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/1806.logol.1ed6e367-fb6f-461a-b0a0-6f38b29d9040.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/1806.logol.1ed6e367-fb6f-461a-b0a0-6f38b29d9040.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/1806.logol.1ed6e367-fb6f-461a-b0a0-6f38b29d9040.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/2244.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/2244.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/2244.logol.304dd92c-45dd-4896-80c8-1d9961d10e85.1-31.xml: 0 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 0 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/2244.logol.304dd92c-45dd-4896-80c8-1d9961d10e85.0-31-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/2244.logol.304dd92c-45dd-4896-80c8-1d9961d10e85.0-31-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/2235.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/2235.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/2235.logol.4cdae4c5-2f50-4ef0-b4e0-09bc606c39fc.1-26.xml: 6 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 6 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/2235.logol.4cdae4c5-2f50-4ef0-b4e0-09bc606c39fc.0-26-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/2235.logol.4cdae4c5-2f50-4ef0-b4e0-09bc606c39fc.0-26-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/2242.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/2242.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/2242.logol.7922b3ec-6eea-41f0-aea0-f6ef6dce0100.1-29.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/2242.logol.7922b3ec-6eea-41f0-aea0-f6ef6dce0100.0-29-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/2242.logol.7922b3ec-6eea-41f0-aea0-f6ef6dce0100.0-29-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/2243.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/2243.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/2243.logol.6df1fbf2-d498-42ea-bdc8-b34a725bb4f3.1-15.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/2243.logol.6df1fbf2-d498-42ea-bdc8-b34a725bb4f3.0-15-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/2243.logol.6df1fbf2-d498-42ea-bdc8-b34a725bb4f3.0-15-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/fix2244.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/fix2244.logol.3fb2eca6-d541-4fa9-a611-f1e6bbb197e1.1-41.xml: 2 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 2 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/fix2244.logol.3fb2eca6-d541-4fa9-a611-f1e6bbb197e1.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/fix2244.logol.3fb2eca6-d541-4fa9-a611-f1e6bbb197e1.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/halt.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.Logol - option all called [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/halt.logol.3fa3fda0-f7a5-407d-9efa-1cce9e023ebd.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/halt.logol.3fa3fda0-f7a5-407d-9efa-1cce9e023ebd.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/halt.logol.3fa3fda0-f7a5-407d-9efa-1cce9e023ebd.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/negcontent2.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/negcontent2.logol.9bb1caa6-c06d-48ad-b48d-603cef5cdb4e.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/negcontent2.logol.9bb1caa6-c06d-48ad-b48d-603cef5cdb4e.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/negcontent2.logol.9bb1caa6-c06d-48ad-b48d-603cef5cdb4e.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/negcontent3.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/negcontent3.logol.66e73ffc-0bc8-4fab-8042-31c4328a64e9.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/negcontent3.logol.66e73ffc-0bc8-4fab-8042-31c4328a64e9.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/negcontent3.logol.66e73ffc-0bc8-4fab-8042-31c4328a64e9.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/external.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/external.logol.17dfc802-492c-4712-b858-cac7ccd5f53f.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/external.logol.17dfc802-492c-4712-b858-cac7ccd5f53f.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/external.logol.17dfc802-492c-4712-b858-cac7ccd5f53f.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/end_of_stream1.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/end_of_stream1.logol.d93b31d1-5b7f-43e9-94d0-6f819b3a0273.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/end_of_stream1.logol.d93b31d1-5b7f-43e9-94d0-6f819b3a0273.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/end_of_stream1.logol.d93b31d1-5b7f-43e9-94d0-6f819b3a0273.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/end_of_stream2.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/end_of_stream2.logol.616b22e6-847f-4419-91dc-2937ea5b2c99.1-41.xml: 0 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 0 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/end_of_stream2.logol.616b22e6-847f-4419-91dc-2937ea5b2c99.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/end_of_stream2.logol.616b22e6-847f-4419-91dc-2937ea5b2c99.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/metacontrol.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/metacontrol.logol.bb48224a-597c-410a-b7ed-0c46a5e0b05e.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/metacontrol.logol.bb48224a-597c-410a-b7ed-0c46a5e0b05e.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/metacontrol.logol.bb48224a-597c-410a-b7ed-0c46a5e0b05e.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/view_begin.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/view_begin.logol.0f1fb36b-d6cd-4ba5-bbda-571c294fa0b4.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/view_begin.logol.0f1fb36b-d6cd-4ba5-bbda-571c294fa0b4.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/view_begin.logol.0f1fb36b-d6cd-4ba5-bbda-571c294fa0b4.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/begin_postpone.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/begin_postpone.logol.ae421860-1671-4b55-a295-0bffb3e73b1f.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/begin_postpone.logol.ae421860-1671-4b55-a295-0bffb3e73b1f.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/begin_postpone.logol.ae421860-1671-4b55-a295-0bffb3e73b1f.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/complement.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.Logol - option all called [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/complement.logol.10b0def3-08f6-4760-bebe-8d12de390436.1-41.xml: 0 [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/complement.logol.10b0def3-08f6-4760-bebe-8d12de390436.reverse.1-41.xml: 3 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 3 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/complement.logol.10b0def3-08f6-4760-bebe-8d12de390436.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/complement.logol.10b0def3-08f6-4760-bebe-8d12de390436.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/protein.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/protein.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.Logol - option protein called [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/protein.logol.dece18f2-0cda-4fe5-90cc-aa1789a13987.1-23.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/protein.logol.dece18f2-0cda-4fe5-90cc-aa1789a13987.0-23-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/protein.logol.dece18f2-0cda-4fe5-90cc-aa1789a13987.0-23-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/morphism_var.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/morphism_var.logol.c68e72e2-ff05-4ae4-b1ae-e37f035956af.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/morphism_var.logol.c68e72e2-ff05-4ae4-b1ae-e37f035956af.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/morphism_var.logol.c68e72e2-ff05-4ae4-b1ae-e37f035956af.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/variable.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/variable.logol.9f53c153-cb08-482a-a853-25f44dd65c26.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/variable.logol.9f53c153-cb08-482a-a853-25f44dd65c26.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/variable.logol.9f53c153-cb08-482a-a853-25f44dd65c26.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/cost_postpone.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/cost_postpone.logol.c46a951a-e300-4949-8c94-648a1c38ad0d.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/cost_postpone.logol.c46a951a-e300-4949-8c94-648a1c38ad0d.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/cost_postpone.logol.c46a951a-e300-4949-8c94-648a1c38ad0d.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/call_model.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/call_model.logol.e944c89c-59f7-4667-8a36-0d81c7325a9d.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/call_model.logol.e944c89c-59f7-4667-8a36-0d81c7325a9d.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/call_model.logol.e944c89c-59f7-4667-8a36-0d81c7325a9d.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/variablewithdistance.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/variablewithdistance.logol.ce2529b7-5f10-4d2d-aa3a-5e12c87787f7.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/variablewithdistance.logol.ce2529b7-5f10-4d2d-aa3a-5e12c87787f7.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/variablewithdistance.logol.ce2529b7-5f10-4d2d-aa3a-5e12c87787f7.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option m called with /<>/test/optimal.lgd [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Decoded grammar: [junit] mod1(LOGOLVAR1)==>LOGOLVAR2%mydata%:{?"aaaa"},LOGOLVAR3%X1%:{#OPT[2,8]} [junit] mod1(LOGOLVAR4)==*>SEQ1 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Write grammar file ./test/tmp/optimal.lgd.759e0f78-e366-49f7-a70c-d9ec49a0f50f.logol [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/optimal.lgd.759e0f78-e366-49f7-a70c-d9ec49a0f50f.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/optimal.lgd.759e0f78-e366-49f7-a70c-d9ec49a0f50f.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/optimal.lgd.759e0f78-e366-49f7-a70c-d9ec49a0f50f.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/variablewitherror.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/variablewitherror.logol.33790f96-8478-42a6-8d30-b2a00e5473f6.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/variablewitherror.logol.33790f96-8478-42a6-8d30-b2a00e5473f6.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/variablewitherror.logol.33790f96-8478-42a6-8d30-b2a00e5473f6.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option m called with /<>/test/anyspacer.lgd [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Decoded grammar: [junit] mod1(LOGOLVAR4)==>LOGOLVAR5%X1%:{@[0,20]},"ccc" [junit] mod1(LOGOLVAR6)==*>SEQ1 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Write grammar file ./test/tmp/anyspacer.lgd.08260daf-a31d-4d5f-a85c-4c8657e234a6.logol [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/anyspacer.lgd.08260daf-a31d-4d5f-a85c-4c8657e234a6.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/anyspacer.lgd.08260daf-a31d-4d5f-a85c-4c8657e234a6.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/anyspacer.lgd.08260daf-a31d-4d5f-a85c-4c8657e234a6.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option m called with /<>/test/all.lgd [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.Logol - option all called [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Decoded grammar: [junit] mod1(LOGOLVAR6)==>"ccc",.*,"ccc" [junit] mod1(LOGOLVAR7)==*>SEQ1 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Write grammar file ./test/tmp/all.lgd.a437c891-6254-4fcf-acbb-e72e4172d2c1.logol [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/all.lgd.a437c891-6254-4fcf-acbb-e72e4172d2c1.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/all.lgd.a437c891-6254-4fcf-acbb-e72e4172d2c1.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/all.lgd.a437c891-6254-4fcf-acbb-e72e4172d2c1.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/repeat_any.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/repeat_any.logol.77697658-ef0a-4408-a96b-3d68b91d9ba1.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/repeat_any.logol.77697658-ef0a-4408-a96b-3d68b91d9ba1.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/repeat_any.logol.77697658-ef0a-4408-a96b-3d68b91d9ba1.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/comment2.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/comment2.logol.d67cd8fe-ed0d-4c4b-afbd-c6f4510b8ade.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/comment2.logol.d67cd8fe-ed0d-4c4b-afbd-c6f4510b8ade.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/comment2.logol.d67cd8fe-ed0d-4c4b-afbd-c6f4510b8ade.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option m called with /<>/test/negcontent.lgd [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Decoded grammar: [junit] mod1(LOGOLVAR7)==>"aaaa",! "cgta":{#[3,5]} [junit] mod1(LOGOLVAR8)==*>SEQ1 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Write grammar file ./test/tmp/negcontent.lgd.66a3c3eb-40f2-4699-ab85-d19f2e696f08.logol [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/negcontent.lgd.66a3c3eb-40f2-4699-ab85-d19f2e696f08.1-41.xml: 2 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 2 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/negcontent.lgd.66a3c3eb-40f2-4699-ab85-d19f2e696f08.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/negcontent.lgd.66a3c3eb-40f2-4699-ab85-d19f2e696f08.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/parent_witherror.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/parent_witherror.logol.7efec372-6eae-4cec-b250-e8647e7ef876.1-41.xml: 2 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 2 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/parent_witherror.logol.7efec372-6eae-4cec-b250-e8647e7ef876.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/parent_witherror.logol.7efec372-6eae-4cec-b250-e8647e7ef876.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/parent_exact.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/parent_exact.logol.4cea60e0-b959-4053-bfed-8f04e3e9fd11.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/parent_exact.logol.4cea60e0-b959-4053-bfed-8f04e3e9fd11.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/parent_exact.logol.4cea60e0-b959-4053-bfed-8f04e3e9fd11.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/all.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.Logol - option all called [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/all.logol.d7494e5d-5a19-4fe6-87e5-823715b9b443.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/all.logol.d7494e5d-5a19-4fe6-87e5-823715b9b443.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/all.logol.d7494e5d-5a19-4fe6-87e5-823715b9b443.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/variable_unknown.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/variable_unknown.logol.7d2a548e-5c8f-4ff7-8d19-75304c92caab.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/variable_unknown.logol.7d2a548e-5c8f-4ff7-8d19-75304c92caab.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/variable_unknown.logol.7d2a548e-5c8f-4ff7-8d19-75304c92caab.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/morphism.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/morphism.logol.e1b7c621-10eb-4d14-b4cb-db9e6f4e1121.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/morphism.logol.e1b7c621-10eb-4d14-b4cb-db9e6f4e1121.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/morphism.logol.e1b7c621-10eb-4d14-b4cb-db9e6f4e1121.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/or_condition2.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/or_condition2.logol.06f14d7e-e440-4267-864d-f53c5e226d21.1-41.xml: 4 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 4 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/or_condition2.logol.06f14d7e-e440-4267-864d-f53c5e226d21.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/or_condition2.logol.06f14d7e-e440-4267-864d-f53c5e226d21.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/comment.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/comment.logol.b0bacd7e-798e-4316-b89b-22ec568e2324.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/comment.logol.b0bacd7e-798e-4316-b89b-22ec568e2324.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/comment.logol.b0bacd7e-798e-4316-b89b-22ec568e2324.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option m called with /<>/test/variable.lgd [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Decoded grammar: [junit] mod1(LOGOLVAR8)==>"aaa","acgt":{_LOGOLVAR9%R1%},?LOGOLVAR9%R1% [junit] mod1(LOGOLVAR10)==*>SEQ1 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Write grammar file ./test/tmp/variable.lgd.05b71d80-e738-4ce8-8af8-0c544036d487.logol [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/variable.lgd.05b71d80-e738-4ce8-8af8-0c544036d487.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/variable.lgd.05b71d80-e738-4ce8-8af8-0c544036d487.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/variable.lgd.05b71d80-e738-4ce8-8af8-0c544036d487.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/call_model2.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/call_model2.logol.cd9b4a88-7e5c-4a9a-bf0a-4af6be524fae.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/call_model2.logol.cd9b4a88-7e5c-4a9a-bf0a-4af6be524fae.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/call_model2.logol.cd9b4a88-7e5c-4a9a-bf0a-4af6be524fae.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/call_model3.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/call_model3.logol.4d6fb0e1-eb40-43cc-986a-3f406f15df12.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/call_model3.logol.4d6fb0e1-eb40-43cc-986a-3f406f15df12.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/call_model3.logol.4d6fb0e1-eb40-43cc-986a-3f406f15df12.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/call_model4.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/call_model4.logol.0e10bfe8-b6f0-4ba1-a17c-7b808300f0a3.1-41.xml: 2 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 2 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/call_model4.logol.0e10bfe8-b6f0-4ba1-a17c-7b808300f0a3.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/call_model4.logol.0e10bfe8-b6f0-4ba1-a17c-7b808300f0a3.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/repeat2.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/repeat2.logol.ef2d6c09-0742-4b90-b964-097add4ca993.1-41.xml: 3 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 3 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/repeat2.logol.ef2d6c09-0742-4b90-b964-097add4ca993.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/repeat2.logol.ef2d6c09-0742-4b90-b964-097add4ca993.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/reverse.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/reverse.logol.3bec3b00-a1e9-4173-b231-41dff843b07c.1-41.xml: 4 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 4 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/reverse.logol.3bec3b00-a1e9-4173-b231-41dff843b07c.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/reverse.logol.3bec3b00-a1e9-4173-b231-41dff843b07c.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/variable_postcontent_witherror.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/variable_postcontent_witherror.logol.6cf8d78c-0338-4fb2-93ef-2288d866a15b.1-41.xml: 4 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 4 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/variable_postcontent_witherror.logol.6cf8d78c-0338-4fb2-93ef-2288d866a15b.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/variable_postcontent_witherror.logol.6cf8d78c-0338-4fb2-93ef-2288d866a15b.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/variablewitherroranddistance.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/variablewitherroranddistance.logol.77be9009-9e04-4c90-891e-adc64aa611bf.1-41.xml: 2 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 2 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/variablewitherroranddistance.logol.77be9009-9e04-4c90-891e-adc64aa611bf.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/variablewitherroranddistance.logol.77be9009-9e04-4c90-891e-adc64aa611bf.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/complex.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/complex.logol.7934e830-3242-405c-bff2-822efe46eb3a.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/complex.logol.7934e830-3242-405c-bff2-822efe46eb3a.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/complex.logol.7934e830-3242-405c-bff2-822efe46eb3a.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/variablewithdistance2.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/variablewithdistance2.logol.7982935a-9b6b-4862-9e87-9e78f82b56c2.1-41.xml: 0 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 0 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/variablewithdistance2.logol.7982935a-9b6b-4862-9e87-9e78f82b56c2.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/variablewithdistance2.logol.7982935a-9b6b-4862-9e87-9e78f82b56c2.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/variable_postcontent.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/variable_postcontent.logol.08482d25-c6d8-488d-a774-d06df77f6e03.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/variable_postcontent.logol.08482d25-c6d8-488d-a774-d06df77f6e03.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/variable_postcontent.logol.08482d25-c6d8-488d-a774-d06df77f6e03.0-41-all.xml [junit] cgttttgggg [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/multiple_model.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/multiple_model.logol.b63e630f-81d8-4920-b126-1295b36818d1.1-41.xml: 3 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 3 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/multiple_model.logol.b63e630f-81d8-4920-b126-1295b36818d1.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/multiple_model.logol.b63e630f-81d8-4920-b126-1295b36818d1.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/variable.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/variable.logol.7eb06ac5-c9cc-454c-b6a9-473819170696.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/variable.logol.7eb06ac5-c9cc-454c-b6a9-473819170696.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/variable.logol.7eb06ac5-c9cc-454c-b6a9-473819170696.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/variable.logol.7eb06ac5-c9cc-454c-b6a9-473819170696.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option m called with /<>/test/begin.lgd [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Decoded grammar: [junit] mod1(LOGOLVAR10)==>"aaaa",.*,LOGOLVAR11%X1%:{@[10,12],#[2,8]} [junit] mod1(LOGOLVAR12)==*>SEQ1 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Write grammar file ./test/tmp/begin.lgd.3dcfe340-cb68-43a2-a08a-abb711fec75b.logol [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/begin.lgd.3dcfe340-cb68-43a2-a08a-abb711fec75b.1-41.xml: 10 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 10 [junit] WARN org.irisa.genouest.logol.Logol - Max number of match reached, other matches may be avaible. [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/begin.lgd.3dcfe340-cb68-43a2-a08a-abb711fec75b.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/begin.lgd.3dcfe340-cb68-43a2-a08a-abb711fec75b.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/ruby-cassiopee.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/ruby-cassiopee.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/variable.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.Logol - option all called [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/variable.logol.dd058d2d-f04e-47fb-9b04-1646b2c99ede.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/variable.logol.dd058d2d-f04e-47fb-9b04-1646b2c99ede.reverse.1-41.xml: 0 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/variable.logol.dd058d2d-f04e-47fb-9b04-1646b2c99ede.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/variable.logol.dd058d2d-f04e-47fb-9b04-1646b2c99ede.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/mycost.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/mycost.logol.16544e6f-1165-4148-956e-0da7f45f9806.1-41.xml: 2 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 2 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/mycost.logol.16544e6f-1165-4148-956e-0da7f45f9806.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/mycost.logol.16544e6f-1165-4148-956e-0da7f45f9806.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option m called with /<>/test/morphism.lgd [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Decoded grammar: [junit] mod1(LOGOLVAR12)==>"aaa",+"wc" "tgca" [junit] mod1(LOGOLVAR13)==*>SEQ1 [junit] INFO org.irisa.genouest.logol.utils.model.ModelConverter - Write grammar file ./test/tmp/morphism.lgd.94ba00a5-b713-436b-adc3-202ae91d84cc.logol [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/morphism.lgd.94ba00a5-b713-436b-adc3-202ae91d84cc.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/morphism.lgd.94ba00a5-b713-436b-adc3-202ae91d84cc.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/morphism.lgd.94ba00a5-b713-436b-adc3-202ae91d84cc.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/repeat.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/repeat.logol.e2f0b6de-392c-4bcc-90e1-ff615c51245c.1-41.xml: 2 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 2 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/repeat.logol.e2f0b6de-392c-4bcc-90e1-ff615c51245c.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/repeat.logol.e2f0b6de-392c-4bcc-90e1-ff615c51245c.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/parent_witherror2.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/parent_witherror2.logol.b409f97c-9a76-4b27-8184-38bf18a926dd.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/parent_witherror2.logol.b409f97c-9a76-4b27-8184-38bf18a926dd.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/parent_witherror2.logol.b409f97c-9a76-4b27-8184-38bf18a926dd.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/external2.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/external2.logol.45368e96-13b3-495b-9499-818d5a8ceeb9.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/external2.logol.45368e96-13b3-495b-9499-818d5a8ceeb9.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/external2.logol.45368e96-13b3-495b-9499-818d5a8ceeb9.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/repeat_interspacer.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/repeat_interspacer.logol.b5f48ddb-5c10-4525-88f9-49830c33617b.1-41.xml: 3 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 3 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/repeat_interspacer.logol.b5f48ddb-5c10-4525-88f9-49830c33617b.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/repeat_interspacer.logol.b5f48ddb-5c10-4525-88f9-49830c33617b.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/notview.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/notview.logol.fa234f47-6a1f-4072-8932-074fb0a121b0.1-41.xml: 2 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 2 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/notview.logol.fa234f47-6a1f-4072-8932-074fb0a121b0.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/notview.logol.fa234f47-6a1f-4072-8932-074fb0a121b0.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/repeat_anyspacer.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/repeat_anyspacer.logol.fd17f8f1-5637-468a-b413-6bef4429959e.1-41.xml: 4 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 4 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/repeat_anyspacer.logol.fd17f8f1-5637-468a-b413-6bef4429959e.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/repeat_anyspacer.logol.fd17f8f1-5637-468a-b413-6bef4429959e.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/notrepeat.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/notrepeat.logol.b213a487-22dc-41a3-a65a-fb5a1db816ae.1-41.xml: 1 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 1 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/notrepeat.logol.b213a487-22dc-41a3-a65a-fb5a1db816ae.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/notrepeat.logol.b213a487-22dc-41a3-a65a-fb5a1db816ae.0-41-all.xml [junit] For help, use option -h [junit] INFO org.irisa.genouest.logol.Logol - option conf called with /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - Using configuration file: /<>/test/logol.properties [junit] INFO org.irisa.genouest.logol.Logol - option g called with /<>/test/or_condition.logol [junit] INFO org.irisa.genouest.logol.Logol - option s called with /<>/test/test.fasta [junit] INFO org.irisa.genouest.logol.Logol - option max called with 10 [junit] INFO org.irisa.genouest.logol.utils.LogolUtils - Sequence not splitted, only 1 thread or job will analyse the sequence [junit] INFO org.irisa.genouest.logol.Logol - Start analyse to create grammar analyser [junit] Executing prolog for pre-analyse [junit] INFO org.irisa.genouest.logol.Logol - Analyse in progress.. [junit] WARN org.irisa.genouest.logol.SequenceAnalyser - Path to suffix search tool is not set in system environment. Will try to execute directly but may fail if not in PATH of current user [junit] INFO org.irisa.genouest.logol.Logol - ./test/tmp/or_condition.logol.ba1c883b-556b-46e0-beea-a9fa7a2c66a7.1-41.xml: 3 [junit] INFO org.irisa.genouest.logol.Logol - Number of output match: 3 [junit] INFO org.irisa.genouest.logol.Logol - JOB OVER !!! [junit] INFO org.irisa.genouest.logol.Logol - RESULT FILES ARE AVAILABLE: [junit] INFO org.irisa.genouest.logol.Logol - - ./test/tmp/or_condition.logol.ba1c883b-556b-46e0-beea-a9fa7a2c66a7.0-41-all.xml [junit] INFO org.irisa.genouest.logol.test.GrammarTest - Checking file ./test/tmp/or_condition.logol.ba1c883b-556b-46e0-beea-a9fa7a2c66a7.0-41-all.xml [junit] ------------- ---------------- --------------- [junit] ------------- Standard Error ----------------- [junit] log4j:ERROR setFile(null,true) call failed. [junit] java.io.FileNotFoundException: /var/log/logol/logol.log (No such file or directory) [junit] at java.io.FileOutputStream.open0(Native Method) [junit] at java.io.FileOutputStream.open(FileOutputStream.java:270) [junit] at java.io.FileOutputStream.(FileOutputStream.java:213) [junit] at java.io.FileOutputStream.(FileOutputStream.java:133) [junit] at org.apache.log4j.FileAppender.setFile(FileAppender.java:294) [junit] at org.apache.log4j.FileAppender.activateOptions(FileAppender.java:165) [junit] at org.apache.log4j.config.PropertySetter.activate(PropertySetter.java:307) [junit] at org.apache.log4j.config.PropertySetter.setProperties(PropertySetter.java:172) [junit] at org.apache.log4j.config.PropertySetter.setProperties(PropertySetter.java:104) [junit] at org.apache.log4j.PropertyConfigurator.parseAppender(PropertyConfigurator.java:842) [junit] at org.apache.log4j.PropertyConfigurator.parseCategory(PropertyConfigurator.java:768) [junit] at org.apache.log4j.PropertyConfigurator.parseCatsAndRenderers(PropertyConfigurator.java:672) [junit] at org.apache.log4j.PropertyConfigurator.doConfigure(PropertyConfigurator.java:516) [junit] at org.apache.log4j.PropertyConfigurator.doConfigure(PropertyConfigurator.java:580) [junit] at org.apache.log4j.helpers.OptionConverter.selectAndConfigure(OptionConverter.java:526) [junit] at org.apache.log4j.LogManager.(LogManager.java:127) [junit] at org.apache.log4j.Logger.getLogger(Logger.java:117) [junit] at org.irisa.genouest.logol.test.GrammarTest.(Unknown Source) [junit] at java.lang.Class.forName0(Native Method) [junit] at java.lang.Class.forName(Class.java:264) [junit] at org.apache.tools.ant.taskdefs.optional.junit.JUnitTestRunner.run(JUnitTestRunner.java:380) [junit] at org.apache.tools.ant.taskdefs.optional.junit.JUnitTestRunner.launch(JUnitTestRunner.java:1182) [junit] at org.apache.tools.ant.taskdefs.optional.junit.JUnitTestRunner.main(JUnitTestRunner.java:1033) [junit] line 4:0 missing NEWLINE at 'mod2' [junit] line 4:0 missing NEWLINE at 'mod2' [junit] line 4:0 missing NEWLINE at 'mod2' [junit] ------------- ---------------- --------------- [junit] Testcase: testAmbiguous(org.irisa.genouest.logol.test.GrammarTest):SKIPPED: got: , expected: is [junit] Testcase: testVMatch2(org.irisa.genouest.logol.test.GrammarTest):SKIPPED: got: , expected: is [junit] Testcase: testVMatch3(org.irisa.genouest.logol.test.GrammarTest):SKIPPED: got: , expected: is [junit] Testcase: testVMatch(org.irisa.genouest.logol.test.GrammarTest):SKIPPED: got: , expected: is BUILD SUCCESSFUL Total time: 38 seconds mkdir -p test/tmp test/results ant -f build.xml doc Buildfile: /<>/build.xml [taskdef] Could not load definitions from resource tasks.properties. 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BUILD SUCCESSFUL Total time: 3 seconds make[1]: Leaving directory '/<>' dh_auto_test create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_installdirs dh_auto_install debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install rm -f debian/logol/usr/share/logol/prolog/*.c rm -f debian/logol/usr/share/logol/prolog/*.exe rm -f debian/logol/usr/share/logol/prolog/logol.properties rm -f debian/logol/usr/share/logol/tools/*.keep_old_script if [ -e debian/logol ]; then chmod -f 755 debian/logol/usr/share/logol/*.sh; fi if [ -e debian/logol ]; then chmod -f 755 debian/logol/usr/share/logol/tools/*.sh; fi if [ -e debian/logol ]; then chmod -f 755 debian/logol/usr/share/logol/tools/*.rb; fi if [ -e debian/logol ]; then chmod -f 755 debian/logol/usr/share/logol/tools/mycostfunction; fi make[1]: Leaving directory '/<>' dh_installdocs dh_installchangelogs debian/rules override_dh_installexamples make[1]: Entering directory '/<>' rm -f test/tmp/* rm -f test/results/* dh_installexamples make[1]: Leaving directory '/<>' dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing debian/rules override_dh_strip make[1]: Entering directory '/<>' dh_strip -Xlogol.exe -Xpreanalyse.exe make[1]: Leaving directory '/<>' dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/logol-bin/usr/lib/logol/preanalyse.exe debian/logol-bin/usr/lib/logol/logol.exe were not linked against libpthread.so.0 (they use none of the library's symbols) dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package logol: unknown substitution variable ${shlibs:Depends} dh_md5sums dh_builddeb INFO: pkgstriptranslations version 131 INFO: pkgstriptranslations version 131 pkgstriptranslations: processing logol (in debian/logol); do_strip: , oemstrip: pkgstriptranslations: processing logol-bin (in debian/logol-bin); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/logol/DEBIAN/control, package logol, directory debian/logol .. removing usr/share/doc/logol/CHANGELOG.txt Searching for duplicated docs in dependency logol-bin... symlinking changelog.Debian.gz in logol to file in logol-bin pkgstripfiles: Running PNG optimization (using 4 cpus) for package logol ... pkgstripfiles: No PNG files. dpkg-deb: building package 'logol' in '../logol_1.7.7-1build1_all.deb'. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/logol-bin/DEBIAN/control, package logol-bin, directory debian/logol-bin pkgstripfiles: Truncating usr/share/doc/logol-bin/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package logol-bin ... pkgstripfiles: No PNG files. dpkg-deb: building package 'logol-bin' in '../logol-bin_1.7.7-1build1_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../logol_1.7.7-1build1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build logol-1.7.7 dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20180206-0202 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ logol_1.7.7-1build1_amd64.changes: ---------------------------------- Format: 1.8 Date: Mon, 05 Feb 2018 17:56:23 -0800 Source: logol Binary: logol logol-bin Architecture: amd64 all Version: 1.7.7-1build1 Distribution: bionic-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Steve Langasek Description: logol - Pattern matching tool using Logol language logol-bin - Pattern matching tool using Logol language Changes: logol (1.7.7-1build1) bionic; urgency=medium . * No-change rebuild against swi-prolog 7.6.4. Checksums-Sha1: 107c61a6add28faee5d6ca60533550b61b0b9e2e 147676 logol-bin_1.7.7-1build1_amd64.deb 525db34800ba83f6ae4a94f3ad493f05f6127e5c 1616516 logol_1.7.7-1build1_all.deb f3b4f6db771f33a5944aeb0b1afb8f1a9ca078db 12849 logol_1.7.7-1build1_amd64.buildinfo Checksums-Sha256: 950980eec08ab1bf6f393ce50f6a8d3c90ceaecb161a1fd40eaf61c6654c53bb 147676 logol-bin_1.7.7-1build1_amd64.deb 227026c0df3384768db2e0f78ef259b0a65d098ab45a4f9e6e82bb97fd32eae1 1616516 logol_1.7.7-1build1_all.deb 9b644f8fa5370a9f49c141ec578b8ec80a7330ab6ff8ffd2891ea809ad59bbfb 12849 logol_1.7.7-1build1_amd64.buildinfo Files: 17543fd8240663a378e963ef13e1aeb6 147676 science optional logol-bin_1.7.7-1build1_amd64.deb e9f6666f660e49e75227f3594dc65c92 1616516 science optional logol_1.7.7-1build1_all.deb a90d6f63150afc735e6f96213435eb44 12849 science optional logol_1.7.7-1build1_amd64.buildinfo +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ logol-bin_1.7.7-1build1_amd64.deb --------------------------------- new debian package, version 2.0. size 147676 bytes: control archive=928 bytes. 861 bytes, 19 lines control 339 bytes, 5 lines md5sums Package: logol-bin Source: logol Version: 1.7.7-1build1 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 970 Depends: libc6 (>= 2.4), swi-prolog-nox (>= 7.6.4+dfsg~), swi-prolog-nox (<< 7.6.4+dfsg.0~), swi-prolog (>= 6.4.1-3), libncursesw5 Section: science Priority: optional Homepage: http://logol.genouest.org Description: Pattern matching tool using Logol language This package contains the Prolog binaries used by Logol to parse the sequence and match the grammar. . Logol is a pattern matching tool using the Logol language. It searches with a specific grammar a pattern in small or large sequence (dna, rna, protein). It provides complete result matching with the original grammar in the results. drwxr-xr-x root/root 0 2018-02-06 01:56 ./ drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/ drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/lib/ drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/lib/logol/ -rwxr-xr-x root/root 486237 2018-02-06 01:56 ./usr/lib/logol/logol.exe -rwxr-xr-x root/root 486069 2018-02-06 01:56 ./usr/lib/logol/preanalyse.exe drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/share/ drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/share/doc/logol-bin/ -rw-r--r-- root/root 924 2018-02-06 01:56 ./usr/share/doc/logol-bin/changelog.Debian.gz -rw-r--r-- root/root 1354 2017-12-08 08:54 ./usr/share/doc/logol-bin/copyright drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/share/lintian/ drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 222 2017-12-08 08:54 ./usr/share/lintian/overrides/logol-bin drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/share/logol/ drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/share/logol/prolog/ lrwxrwxrwx root/root 0 2018-02-06 01:56 ./usr/share/logol/prolog/logol.exe -> ../../../lib/logol/logol.exe lrwxrwxrwx root/root 0 2018-02-06 01:56 ./usr/share/logol/prolog/preanalyse.exe -> ../../../lib/logol/preanalyse.exe logol_1.7.7-1build1_all.deb --------------------------- new debian package, version 2.0. size 1616516 bytes: control archive=4276 bytes. 28 bytes, 1 lines conffiles 932 bytes, 16 lines control 10321 bytes, 136 lines md5sums Package: logol Version: 1.7.7-1build1 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1959 Depends: default-jre | java7-runtime, ruby, gawk, libbiojava-java, antlr3, libcommons-cli-java, libcommons-collections3-java, libcommons-configuration-java, libcommons-lang-java, libcommons-logging-java, libxalan2-java, libxerces2-java, libmail-java, liblog4j1.2-java, cassiopee, logol-bin Suggests: ruby-cassiopee (>= 0.1.12) Section: science Priority: optional Homepage: http://logol.genouest.org Description: Pattern matching tool using Logol language Logol is a pattern matching tool using the Logol language. It searches with a specific grammar a pattern in small or large sequence (dna, rna, protein). It provides complete result matching with the original grammar in the results. drwxr-xr-x root/root 0 2018-02-06 01:56 ./ drwxr-xr-x root/root 0 2018-02-06 01:56 ./etc/ drwxr-xr-x root/root 0 2018-02-06 01:56 ./etc/logol/ -rw-r--r-- root/root 1704 2018-02-06 01:56 ./etc/logol/logol.properties drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/ drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/bin/ lrwxrwxrwx root/root 0 2018-02-06 01:56 ./usr/bin/LogolExec -> ../share/logol/LogolExec.sh lrwxrwxrwx root/root 0 2018-02-06 01:56 ./usr/bin/LogolMultiExec -> ../share/logol/LogolMultiExec.sh drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/share/ drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/share/doc-base/ -rw-r--r-- root/root 184 2017-12-08 08:54 ./usr/share/doc-base/logol drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/share/doc/logol/ -rw-r--r-- root/root 2943 2017-12-08 08:47 ./usr/share/doc/logol/LogolGrammar.txt -rw-r--r-- root/root 211 2017-12-08 08:54 ./usr/share/doc/logol/README.Debian -rw-r--r-- root/root 3622 2017-12-08 08:47 ./usr/share/doc/logol/README.md -rw-r--r-- root/root 250 2017-12-08 08:47 ./usr/share/doc/logol/SWI-README lrwxrwxrwx root/root 0 2018-02-06 01:56 ./usr/share/doc/logol/changelog.Debian.gz -> ../logol-bin/changelog.Debian.gz -rw-r--r-- root/root 1354 2017-12-08 08:54 ./usr/share/doc/logol/copyright drwxr-xr-x root/root 0 2018-02-06 01:56 ./usr/share/doc/logol/examples/ -rw-r--r-- root/root 15 2017-12-08 08:47 ./usr/share/doc/logol/examples/1799.fasta -rw-r--r-- root/root 70 2017-12-08 08:47 ./usr/share/doc/logol/examples/1799.logol -rw-r--r-- root/root 25 2017-12-08 08:47 ./usr/share/doc/logol/examples/1800.fasta -rw-r--r-- root/root 56 2017-12-08 08:47 ./usr/share/doc/logol/examples/1800.logol -rw-r--r-- root/root 118 2017-12-08 08:47 ./usr/share/doc/logol/examples/1806.logol -rw-r--r-- root/root 33 2017-12-08 08:47 ./usr/share/doc/logol/examples/2235.fasta -rw-r--r-- root/root 65 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+------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 12976 Build-Time: 59 Distribution: bionic-proposed Host Architecture: amd64 Install-Time: 136 Job: logol_1.7.7-1build1.dsc Machine Architecture: amd64 Package: logol Package-Time: 197 Source-Version: 1.7.7-1build1 Space: 12976 Status: successful Version: 1.7.7-1build1 -------------------------------------------------------------------------------- Finished at 20180206-0202 Build needed 00:03:17, 12976k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-14314967 Scanning for processes to kill in build PACKAGEBUILD-14314967 RUN: /usr/share/launchpad-buildd/slavebin/in-target umount-chroot --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-14314967 Stopping target for build PACKAGEBUILD-14314967 RUN: /usr/share/launchpad-buildd/slavebin/in-target remove-build --backend=chroot --series=bionic --arch=amd64 PACKAGEBUILD-14314967 Removing build PACKAGEBUILD-14314967