Ubuntu
lumpy-sv package

lumpy-sv 0.3.1+dfsg-8.1 source package in Ubuntu

Changelog

lumpy-sv (0.3.1+dfsg-8.1) unstable; urgency=medium

  * Non-maintainer upload.
  * Add B-D on python3-pysam (Closes: #1121752)
    - lumpy-sv is uninstallable in s390x as python3-pysam is not available in
      s390x. Add it back as B-D so that lumpy-sv is not built in s390x till
      python3-pysam is fixed in s390x.

 -- Sudip Mukherjee <email address hidden>  Mon, 29 Dec 2025 14:15:32 +0000

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Resolute release universe misc

Downloads

File Size SHA-256 Checksum
lumpy-sv_0.3.1+dfsg-8.1.dsc 2.1 KiB c93817f65a87321ea6da888b6aa6d1d78aaa74df51e583fda558a6c2f463e71b
lumpy-sv_0.3.1+dfsg.orig.tar.xz 109.2 KiB 78a6fe414739286d1f799bbdf3e34b9a1d6ed03b4c6dd17bfef1fcbba84bd35a
lumpy-sv_0.3.1+dfsg-8.1.debian.tar.xz 37.4 MiB 4d302e20a023158ea46bd565f6300c7dd096d2baa63f03207ad19d4d4d4beee5

No changes file available.

Binary packages built by this source

lumpy-sv: general probabilistic framework for structural variant discovery

 LUMPY, a novel SV discovery framework that naturally integrates multiple
 SV signals jointly across multiple samples. LUMPY yields improved
 sensitivity, especially when SV signal is reduced owing to either low
 coverage data or low intra-sample variant allele frequency.

lumpy-sv-dbgsym: debug symbols for lumpy-sv
lumpy-sv-examples: general probabilistic framework for structural variant discovery (data)

 LUMPY, a novel SV discovery framework that naturally integrates multiple
 SV signals jointly across multiple samples. LUMPY yields improved
 sensitivity, especially when SV signal is reduced owing to either low
 coverage data or low intra-sample variant allele frequency.
 .
 This package contains some example data and scripts to test lumpy-sv.