RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux birch 3.8.0 #1 SMP Tue Oct 8 01:20:46 ICT 2013 aarch64 Buildd toolchain package versions: launchpad-buildd_119~APM.12.04.2 python-lpbuildd_119~APM.12.04.2. Syncing the system clock with the buildd NTP service... 19 Oct 20:29:34 ntpdate[391]: adjust time server 10.211.37.1 offset -0.098051 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-5123048', '/home/buildd/filecache-default/dce386487a5f44370afebb182ff0656ba929e12f'] Unpacking chroot for build PACKAGEBUILD-5123048 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-5123048'] Mounting chroot for build PACKAGEBUILD-5123048 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-5123048', 'deb http://ftpmaster.internal/ubuntu trusty main universe'] Overriding sources.list in build-PACKAGEBUILD-5123048 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-5123048', 'arm64'] Updating debian chroot for build PACKAGEBUILD-5123048 Ign http://ftpmaster.internal trusty InRelease Ign http://archive-team.internal trusty InRelease Get:1 http://ftpmaster.internal trusty Release.gpg [933 B] Ign http://archive-team.internal trusty Release.gpg Get:2 http://archive-team.internal trusty Release [730 B] Get:3 http://ftpmaster.internal trusty Release [49.6 kB] Get:4 http://ftpmaster.internal trusty/main arm64 Packages [1143 kB] Get:5 http://archive-team.internal trusty/main arm64 Packages Ign http://archive-team.internal trusty/main Translation-en Get:6 http://ftpmaster.internal trusty/universe arm64 Packages [3648 kB] Get:7 http://ftpmaster.internal trusty/main Translation-en [711 kB] Get:8 http://ftpmaster.internal trusty/universe Translation-en [3885 kB] Fetched 9438 kB in 16s (588 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: base-files libprocps0 libudev1 procps udev 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 1359 kB of archives. After this operation, 1024 B of additional disk space will be used. WARNING: The following packages cannot be authenticated! base-files libprocps0 udev libudev1 procps Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main base-files arm64 6.12ubuntu5 [62.6 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main libprocps0 arm64 1:3.3.3-2ubuntu8 [31.4 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main udev arm64 204-0ubuntu19 [1014 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main libudev1 arm64 204-0ubuntu19 [30.9 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main procps arm64 1:3.3.3-2ubuntu8 [220 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1359 kB in 5s (269 kB/s) (Reading database ... 11933 files and directories currently installed.) Preparing to replace base-files 6.12ubuntu4 (using .../base-files_6.12ubuntu5_arm64.deb) ... Unpacking replacement base-files ... Setting up base-files (6.12ubuntu5) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Installing new version of config file /etc/os-release ... (Reading database ... 11933 files and directories currently installed.) Preparing to replace libprocps0:arm64 1:3.3.3-2ubuntu7 (using .../libprocps0_1%3a3.3.3-2ubuntu8_arm64.deb) ... Unpacking replacement libprocps0:arm64 ... Preparing to replace udev 204-0ubuntu18 (using .../udev_204-0ubuntu19_arm64.deb) ... Adding 'diversion of /bin/udevadm to /bin/udevadm.upgrade by fake-udev' Unpacking replacement udev ... Preparing to replace libudev1:arm64 204-0ubuntu18 (using .../libudev1_204-0ubuntu19_arm64.deb) ... Unpacking replacement libudev1:arm64 ... Preparing to replace procps 1:3.3.3-2ubuntu7 (using .../procps_1%3a3.3.3-2ubuntu8_arm64.deb) ... invoke-rc.d: policy-rc.d denied execution of stop. Unpacking replacement procps ... Setting up libprocps0:arm64 (1:3.3.3-2ubuntu8) ... Setting up libudev1:arm64 (204-0ubuntu19) ... Setting up udev (204-0ubuntu19) ... invoke-rc.d: policy-rc.d denied execution of restart. Removing 'diversion of /bin/udevadm to /bin/udevadm.upgrade by fake-udev' update-initramfs: deferring update (trigger activated) Setting up procps (1:3.3.3-2ubuntu8) ... invoke-rc.d: policy-rc.d denied execution of start. Processing triggers for libc-bin ... Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-5123048', 'arm64', 'trusty', '--nolog', '--batch', '--archive=ubuntu', '--dist=trusty', '--purpose=PRIMARY', '--architecture=arm64', '--comp=universe', 'maqview_0.2.5-6.dsc'] Initiating build PACKAGEBUILD-5123048 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 3.8.0 #1 SMP Tue Oct 8 01:20:46 ICT 2013 aarch64 Automatic build of maqview_0.2.5-6 on birch by sbuild/arm64 1.170.5 Build started at 20131019-2030 ****************************************************************************** maqview_0.2.5-6.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 9), autotools-dev, automake, freeglut3-dev, dh-autoreconf, libxi-dev Checking for already installed source dependencies... debhelper: missing autotools-dev: missing automake: missing freeglut3-dev: missing dh-autoreconf: missing libxi-dev: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper autotools-dev automake freeglut3-dev dh-autoreconf libxi-dev Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: apparmor-easyprof autoconf autopoint bsdmainutils dh-apparmor dh-python file freeglut3 gettext gettext-base git git-man groff-base intltool-debian libasprintf-dev libasprintf0c2 libcroco3 libdrm-dev libdrm-nouveau2 libdrm-radeon1 liberror-perl libexpat1 libffi6 libgettextpo-dev libgettextpo0 libgl1-mesa-dev libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglu1-mesa libglu1-mesa-dev libice-dev libice6 libkms1 libmagic1 libpipeline1 libpthread-stubs0 libpthread-stubs0-dev libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libsigsegv2 libsm-dev libsm6 libssl1.0.0 libtool libunistring0 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-glx0 libxcb-glx0-dev libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxi6 libxml2 libxt-dev libxt6 libxxf86vm-dev libxxf86vm1 m4 man-db mesa-common-dev mime-support po-debconf python3 python3-minimal python3.3 python3.3-minimal x11-common x11proto-core-dev x11proto-damage-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev x11proto-input-dev x11proto-kb-dev x11proto-xext-dev x11proto-xf86vidmode-dev xorg-sgml-doctools xtrans-dev Suggested packages: autoconf2.13 autoconf-archive gnu-standards autoconf-doc wamerican wordlist whois vacation dh-make gettext-doc git-daemon-run git-daemon-sysvinit git-doc git-el git-email git-gui gitk gitweb git-arch git-bzr git-cvs git-svn groff libice-doc libsm-doc libtool-doc automaken gfortran fortran95-compiler gcj libxcb-doc libxext-doc libxt-doc www-browser libmail-box-perl python3-doc python3-tk python3.3-doc binfmt-support Recommended packages: curl wget lynx-cur less rsync ssh-client libgl1-mesa-dri libglib2.0-data shared-mime-info libltdl-dev libx11-doc xml-core libmail-sendmail-perl The following NEW packages will be installed: apparmor-easyprof autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-apparmor dh-autoreconf dh-python file freeglut3 freeglut3-dev gettext gettext-base git git-man groff-base intltool-debian libasprintf-dev libasprintf0c2 libcroco3 libdrm-dev libdrm-nouveau2 libdrm-radeon1 liberror-perl libexpat1 libffi6 libgettextpo-dev libgettextpo0 libgl1-mesa-dev libgl1-mesa-glx libglapi-mesa libglib2.0-0 libglu1-mesa libglu1-mesa-dev libice-dev libice6 libkms1 libmagic1 libpipeline1 libpthread-stubs0 libpthread-stubs0-dev libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libsigsegv2 libsm-dev libsm6 libssl1.0.0 libtool libunistring0 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-glx0 libxcb-glx0-dev libxcb1 libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxi-dev libxi6 libxml2 libxt-dev libxt6 libxxf86vm-dev libxxf86vm1 m4 man-db mesa-common-dev mime-support po-debconf python3 python3-minimal python3.3 python3.3-minimal x11-common x11proto-core-dev x11proto-damage-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev x11proto-input-dev x11proto-kb-dev x11proto-xext-dev x11proto-xf86vidmode-dev xorg-sgml-doctools xtrans-dev 0 upgraded, 101 newly installed, 0 to remove and 0 not upgraded. Need to get 28.1 MB of archives. After this operation, 89.4 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libexpat1 libffi6 libmagic1 libssl1.0.0 libpython3.3-minimal mime-support libpython3.3-stdlib python3.3-minimal libasprintf0c2 libglib2.0-0 libpipeline1 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libxext6 libxml2 groff-base bsdmainutils man-db libglapi-mesa libx11-xcb1 libxcb-dri2-0 libxcb-glx0 libxdamage1 libxfixes3 libxxf86vm1 libgl1-mesa-glx libxi6 freeglut3 libcroco3 libdrm-nouveau2 libdrm-radeon1 libunistring0 libgettextpo0 x11-common libice6 libkms1 libsigsegv2 libsm6 libxt6 libglu1-mesa python3.3 python3-minimal libpython3-stdlib python3 dh-python file gettext-base m4 autoconf autotools-dev automake liberror-perl git-man git autopoint libasprintf-dev libgettextpo-dev gettext intltool-debian po-debconf apparmor-easyprof dh-apparmor debhelper libtool dh-autoreconf xorg-sgml-doctools x11proto-core-dev libxau-dev libxdmcp-dev x11proto-input-dev x11proto-kb-dev xtrans-dev libpthread-stubs0 libpthread-stubs0-dev libxcb1-dev libx11-dev libdrm-dev mesa-common-dev libx11-xcb-dev libxcb-dri2-0-dev libxcb-glx0-dev x11proto-xext-dev x11proto-fixes-dev libxfixes-dev x11proto-damage-dev libxdamage-dev libxext-dev x11proto-xf86vidmode-dev libxxf86vm-dev x11proto-dri2-dev x11proto-gl-dev libgl1-mesa-dev libglu1-mesa-dev libice-dev libsm-dev libxt-dev freeglut3-dev libxi-dev Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1 arm64 2.1.0-4 [114 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main libffi6 arm64 3.0.13-4 [19.0 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main libmagic1 arm64 5.11-2ubuntu4 [163 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main libssl1.0.0 arm64 1.0.1e-3ubuntu1 [860 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.3-minimal arm64 3.3.2-7ubuntu3 [609 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main mime-support all 3.54ubuntu1 [31.7 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.3-stdlib arm64 3.3.2-7ubuntu3 [2568 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main python3.3-minimal arm64 3.3.2-7ubuntu3 [1431 kB] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main libasprintf0c2 arm64 0.18.1.1-10ubuntu3 [6816 B] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main libglib2.0-0 arm64 2.38.0-1ubuntu1 [824 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main libpipeline1 arm64 1.2.4-1 [24.5 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main libxau6 arm64 1:1.0.8-1 [7590 B] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main libxdmcp6 arm64 1:1.1.1-1 [11.7 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main libxcb1 arm64 1.9.1-3ubuntu1 [35.4 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main libx11-data all 2:1.6.1-1ubuntu1 [181 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main libx11-6 arm64 2:1.6.1-1ubuntu1 [709 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main libxext6 arm64 2:1.3.2-1 [28.8 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main libxml2 arm64 2.9.1+dfsg1-3ubuntu2 [588 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty/main groff-base arm64 1.22.2-3 [688 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty/main bsdmainutils arm64 9.0.5ubuntu1 [199 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty/main man-db arm64 2.6.5-2 [678 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main libglapi-mesa arm64 9.2.1-1ubuntu3 [28.6 kB] Get:23 http://ftpmaster.internal/ubuntu/ trusty/main libx11-xcb1 arm64 2:1.6.1-1ubuntu1 [11.0 kB] Get:24 http://ftpmaster.internal/ubuntu/ trusty/main libxcb-dri2-0 arm64 1.9.1-3ubuntu1 [6780 B] Get:25 http://ftpmaster.internal/ubuntu/ trusty/main libxcb-glx0 arm64 1.9.1-3ubuntu1 [20.4 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty/main libxdamage1 arm64 1:1.1.4-1ubuntu1 [7206 B] Get:27 http://ftpmaster.internal/ubuntu/ trusty/main libxfixes3 arm64 1:5.0.1-1ubuntu1 [10.5 kB] Get:28 http://ftpmaster.internal/ubuntu/ trusty/main libxxf86vm1 arm64 1:1.1.3-1 [10.9 kB] Get:29 http://ftpmaster.internal/ubuntu/ trusty/main libgl1-mesa-glx arm64 9.2.1-1ubuntu3 [86.4 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty/main libxi6 arm64 2:1.7.1.901-1ubuntu1 [29.6 kB] Get:31 http://ftpmaster.internal/ubuntu/ trusty/main freeglut3 arm64 2.8.1-1 [82.4 kB] Get:32 http://ftpmaster.internal/ubuntu/ trusty/main libcroco3 arm64 0.6.8-2 [64.9 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty/main libdrm-nouveau2 arm64 2.4.46-1 [13.6 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty/main libdrm-radeon1 arm64 2.4.46-1 [23.4 kB] Get:35 http://ftpmaster.internal/ubuntu/ trusty/main libunistring0 arm64 0.9.3-5ubuntu1 [403 kB] Get:36 http://ftpmaster.internal/ubuntu/ trusty/main libgettextpo0 arm64 0.18.1.1-10ubuntu3 [106 kB] Get:37 http://ftpmaster.internal/ubuntu/ trusty/main x11-common all 1:7.7+1ubuntu6 [58.6 kB] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main libice6 arm64 2:1.0.8-2 [40.0 kB] Get:39 http://ftpmaster.internal/ubuntu/ trusty/main libkms1 arm64 2.4.46-1 [8118 B] Get:40 http://ftpmaster.internal/ubuntu/ trusty/main libsigsegv2 arm64 2.10-2 [14.0 kB] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main libsm6 arm64 2:1.2.1-2 [15.9 kB] Get:42 http://ftpmaster.internal/ubuntu/ trusty/main libxt6 arm64 1:1.1.4-1 [156 kB] Get:43 http://ftpmaster.internal/ubuntu/ trusty/main libglu1-mesa arm64 9.0.0-1 [206 kB] Get:44 http://ftpmaster.internal/ubuntu/ trusty/main python3.3 arm64 3.3.2-7ubuntu3 [129 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main python3-minimal arm64 3.3.2-14ubuntu1 [26.4 kB] Get:46 http://ftpmaster.internal/ubuntu/ trusty/main libpython3-stdlib arm64 3.3.2-14ubuntu1 [8144 B] Get:47 http://ftpmaster.internal/ubuntu/ trusty/main python3 arm64 3.3.2-14ubuntu1 [9144 B] Get:48 http://ftpmaster.internal/ubuntu/ trusty/main dh-python all 1.20131003-1 [61.7 kB] Get:49 http://ftpmaster.internal/ubuntu/ trusty/main file arm64 5.11-2ubuntu4 [18.2 kB] Get:50 http://ftpmaster.internal/ubuntu/ trusty/main gettext-base arm64 0.18.1.1-10ubuntu3 [54.7 kB] Get:51 http://ftpmaster.internal/ubuntu/ trusty/main m4 arm64 1.4.16-5 [193 kB] Get:52 http://ftpmaster.internal/ubuntu/ trusty/main autoconf all 2.69-1.1 [573 kB] Get:53 http://ftpmaster.internal/ubuntu/ trusty/main autotools-dev all 20130810.1 [44.3 kB] Get:54 http://ftpmaster.internal/ubuntu/ trusty/main automake all 1:1.13.3-1.1ubuntu2 [573 kB] Get:55 http://ftpmaster.internal/ubuntu/ trusty/main liberror-perl all 0.17-1 [23.8 kB] Get:56 http://ftpmaster.internal/ubuntu/ trusty/main git-man all 1:1.8.3.2-1 [670 kB] Get:57 http://ftpmaster.internal/ubuntu/ trusty/main git arm64 1:1.8.3.2-1 [7219 kB] Get:58 http://ftpmaster.internal/ubuntu/ trusty/main autopoint all 0.18.1.1-10ubuntu3 [605 kB] Get:59 http://ftpmaster.internal/ubuntu/ trusty/main libasprintf-dev arm64 0.18.1.1-10ubuntu3 [4586 B] Get:60 http://ftpmaster.internal/ubuntu/ trusty/main libgettextpo-dev arm64 0.18.1.1-10ubuntu3 [147 kB] Get:61 http://ftpmaster.internal/ubuntu/ trusty/main gettext arm64 0.18.1.1-10ubuntu3 [994 kB] Get:62 http://ftpmaster.internal/ubuntu/ trusty/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:63 http://ftpmaster.internal/ubuntu/ trusty/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:64 http://ftpmaster.internal/ubuntu/ trusty/main apparmor-easyprof all 2.8.0-0ubuntu31 [23.8 kB] Get:65 http://ftpmaster.internal/ubuntu/ trusty/main dh-apparmor all 2.8.0-0ubuntu31 [7720 B] Get:66 http://ftpmaster.internal/ubuntu/ trusty/main debhelper all 9.20130630ubuntu1 [629 kB] Get:67 http://ftpmaster.internal/ubuntu/ trusty/main libtool arm64 2.4.2-1.3ubuntu1 [305 kB] Get:68 http://ftpmaster.internal/ubuntu/ trusty/main dh-autoreconf all 9 [15.5 kB] Get:69 http://ftpmaster.internal/ubuntu/ trusty/main xorg-sgml-doctools all 1:1.11-1 [12.9 kB] Get:70 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-core-dev all 7.0.24-1 [748 kB] Get:71 http://ftpmaster.internal/ubuntu/ trusty/main libxau-dev arm64 1:1.0.8-1 [9768 B] Get:72 http://ftpmaster.internal/ubuntu/ trusty/main libxdmcp-dev arm64 1:1.1.1-1 [26.2 kB] Get:73 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-input-dev all 2.3-1 [139 kB] Get:74 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-kb-dev all 1.0.6-2 [269 kB] Get:75 http://ftpmaster.internal/ubuntu/ trusty/main xtrans-dev all 1.2.7-1 [84.3 kB] Get:76 http://ftpmaster.internal/ubuntu/ trusty/main libpthread-stubs0 arm64 0.3-3 [3260 B] Get:77 http://ftpmaster.internal/ubuntu/ trusty/main libpthread-stubs0-dev arm64 0.3-3 [2872 B] Get:78 http://ftpmaster.internal/ubuntu/ trusty/main libxcb1-dev arm64 1.9.1-3ubuntu1 [91.4 kB] Get:79 http://ftpmaster.internal/ubuntu/ trusty/main libx11-dev arm64 2:1.6.1-1ubuntu1 [844 kB] Get:80 http://ftpmaster.internal/ubuntu/ trusty/main libdrm-dev arm64 2.4.46-1 [136 kB] Get:81 http://ftpmaster.internal/ubuntu/ trusty/main mesa-common-dev arm64 9.2.1-1ubuntu3 [248 kB] Get:82 http://ftpmaster.internal/ubuntu/ trusty/main libx11-xcb-dev arm64 2:1.6.1-1ubuntu1 [11.0 kB] Get:83 http://ftpmaster.internal/ubuntu/ trusty/main libxcb-dri2-0-dev arm64 1.9.1-3ubuntu1 [9932 B] Get:84 http://ftpmaster.internal/ubuntu/ trusty/main libxcb-glx0-dev arm64 1.9.1-3ubuntu1 [39.8 kB] Get:85 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-xext-dev all 7.2.1-1 [265 kB] Get:86 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-fixes-dev all 1:5.0-2ubuntu2 [14.2 kB] Get:87 http://ftpmaster.internal/ubuntu/ trusty/main libxfixes-dev arm64 1:5.0.1-1ubuntu1 [11.6 kB] Get:88 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-damage-dev all 1:1.2.1-2 [8286 B] Get:89 http://ftpmaster.internal/ubuntu/ trusty/main libxdamage-dev arm64 1:1.1.4-1ubuntu1 [5298 B] Get:90 http://ftpmaster.internal/ubuntu/ trusty/main libxext-dev arm64 2:1.3.2-1 [88.1 kB] Get:91 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-xf86vidmode-dev all 2.3.1-2 [6116 B] Get:92 http://ftpmaster.internal/ubuntu/ trusty/main libxxf86vm-dev arm64 1:1.1.3-1 [14.3 kB] Get:93 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-dri2-dev all 2.8-2 [12.6 kB] Get:94 http://ftpmaster.internal/ubuntu/ trusty/main x11proto-gl-dev all 1.4.16-2 [22.0 kB] Get:95 http://ftpmaster.internal/ubuntu/ trusty/main libgl1-mesa-dev arm64 9.2.1-1ubuntu3 [5180 B] Get:96 http://ftpmaster.internal/ubuntu/ trusty/main libglu1-mesa-dev arm64 9.0.0-1 [311 kB] Get:97 http://ftpmaster.internal/ubuntu/ trusty/main libice-dev arm64 2:1.0.8-2 [52.2 kB] Get:98 http://ftpmaster.internal/ubuntu/ trusty/main libsm-dev arm64 2:1.2.1-2 [17.9 kB] Get:99 http://ftpmaster.internal/ubuntu/ trusty/main libxt-dev arm64 1:1.1.4-1 [442 kB] Get:100 http://ftpmaster.internal/ubuntu/ trusty/main freeglut3-dev arm64 2.8.1-1 [167 kB] Get:101 http://ftpmaster.internal/ubuntu/ trusty/main libxi-dev arm64 2:1.7.1.901-1ubuntu1 [204 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 28.1 MB in 1min 2s (449 kB/s) Selecting previously unselected package libexpat1:arm64. (Reading database ... 11933 files and directories currently installed.) Unpacking libexpat1:arm64 (from .../libexpat1_2.1.0-4_arm64.deb) ... Selecting previously unselected package libffi6:arm64. Unpacking libffi6:arm64 (from .../libffi6_3.0.13-4_arm64.deb) ... Selecting previously unselected package libmagic1:arm64. Unpacking libmagic1:arm64 (from .../libmagic1_5.11-2ubuntu4_arm64.deb) ... Selecting previously unselected package libssl1.0.0:arm64. Unpacking libssl1.0.0:arm64 (from .../libssl1.0.0_1.0.1e-3ubuntu1_arm64.deb) ... Selecting previously unselected package libpython3.3-minimal:arm64. Unpacking libpython3.3-minimal:arm64 (from .../libpython3.3-minimal_3.3.2-7ubuntu3_arm64.deb) ... Selecting previously unselected package mime-support. Unpacking mime-support (from .../mime-support_3.54ubuntu1_all.deb) ... Selecting previously unselected package libpython3.3-stdlib:arm64. Unpacking libpython3.3-stdlib:arm64 (from .../libpython3.3-stdlib_3.3.2-7ubuntu3_arm64.deb) ... 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Unpacking libxi-dev (from .../libxi-dev_2%3a1.7.1.901-1ubuntu1_arm64.deb) ... Setting up libexpat1:arm64 (2.1.0-4) ... Setting up libffi6:arm64 (3.0.13-4) ... Setting up libmagic1:arm64 (5.11-2ubuntu4) ... Setting up libssl1.0.0:arm64 (1.0.1e-3ubuntu1) ... Setting up libpython3.3-minimal:arm64 (3.3.2-7ubuntu3) ... Setting up mime-support (3.54ubuntu1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode Setting up libpython3.3-stdlib:arm64 (3.3.2-7ubuntu3) ... Setting up python3.3-minimal (3.3.2-7ubuntu3) ... Setting up libasprintf0c2:arm64 (0.18.1.1-10ubuntu3) ... Setting up libglib2.0-0:arm64 (2.38.0-1ubuntu1) ... No schema files found: doing nothing. Setting up libpipeline1:arm64 (1.2.4-1) ... Setting up libxau6:arm64 (1:1.0.8-1) ... Setting up libxdmcp6:arm64 (1:1.1.1-1) ... Setting up libxcb1:arm64 (1.9.1-3ubuntu1) ... Setting up libx11-data (2:1.6.1-1ubuntu1) ... Setting up libx11-6:arm64 (2:1.6.1-1ubuntu1) ... Setting up libxext6:arm64 (2:1.3.2-1) ... Setting up libxml2:arm64 (2.9.1+dfsg1-3ubuntu2) ... Setting up groff-base (1.22.2-3) ... Setting up bsdmainutils (9.0.5ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.6.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libglapi-mesa:arm64 (9.2.1-1ubuntu3) ... Setting up libx11-xcb1:arm64 (2:1.6.1-1ubuntu1) ... Setting up libxcb-dri2-0:arm64 (1.9.1-3ubuntu1) ... Setting up libxcb-glx0:arm64 (1.9.1-3ubuntu1) ... Setting up libxdamage1:arm64 (1:1.1.4-1ubuntu1) ... Setting up libxfixes3:arm64 (1:5.0.1-1ubuntu1) ... Setting up libxxf86vm1:arm64 (1:1.1.3-1) ... Setting up libgl1-mesa-glx:arm64 (9.2.1-1ubuntu3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/mesa/ld.so.conf to provide /etc/ld.so.conf.d/aarch64-linux-gnu_GL.conf (aarch64-linux-gnu_gl_conf) in auto mode Setting up libxi6:arm64 (2:1.7.1.901-1ubuntu1) ... Setting up freeglut3:arm64 (2.8.1-1) ... Setting up libcroco3:arm64 (0.6.8-2) ... Setting up libdrm-nouveau2:arm64 (2.4.46-1) ... Setting up libdrm-radeon1:arm64 (2.4.46-1) ... Setting up libunistring0:arm64 (0.9.3-5ubuntu1) ... Setting up libgettextpo0:arm64 (0.18.1.1-10ubuntu3) ... Setting up x11-common (1:7.7+1ubuntu6) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6:arm64 (2:1.0.8-2) ... Setting up libkms1:arm64 (2.4.46-1) ... Setting up libsigsegv2:arm64 (2.10-2) ... Setting up libsm6:arm64 (2:1.2.1-2) ... Setting up libxt6:arm64 (1:1.1.4-1) ... Setting up libglu1-mesa:arm64 (9.0.0-1) ... Setting up python3.3 (3.3.2-7ubuntu3) ... Setting up python3-minimal (3.3.2-14ubuntu1) ... Setting up libpython3-stdlib:arm64 (3.3.2-14ubuntu1) ... Setting up file (5.11-2ubuntu4) ... Setting up gettext-base (0.18.1.1-10ubuntu3) ... Setting up m4 (1.4.16-5) ... Setting up autoconf (2.69-1.1) ... Setting up autotools-dev (20130810.1) ... Setting up automake (1:1.13.3-1.1ubuntu2) ... update-alternatives: using /usr/bin/automake-1.13 to provide /usr/bin/automake (automake) in auto mode Setting up liberror-perl (0.17-1) ... Setting up git-man (1:1.8.3.2-1) ... Setting up git (1:1.8.3.2-1) ... Setting up autopoint (0.18.1.1-10ubuntu3) ... Setting up libasprintf-dev:arm64 (0.18.1.1-10ubuntu3) ... Setting up libgettextpo-dev:arm64 (0.18.1.1-10ubuntu3) ... Setting up gettext (0.18.1.1-10ubuntu3) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up libtool (2.4.2-1.3ubuntu1) ... Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up x11proto-core-dev (7.0.24-1) ... Setting up libxau-dev:arm64 (1:1.0.8-1) ... Setting up libxdmcp-dev:arm64 (1:1.1.1-1) ... Setting up x11proto-input-dev (2.3-1) ... Setting up x11proto-kb-dev (1.0.6-2) ... Setting up xtrans-dev (1.2.7-1) ... Setting up libpthread-stubs0:arm64 (0.3-3) ... Setting up libpthread-stubs0-dev:arm64 (0.3-3) ... Setting up libxcb1-dev:arm64 (1.9.1-3ubuntu1) ... Setting up libx11-dev:arm64 (2:1.6.1-1ubuntu1) ... Setting up libdrm-dev (2.4.46-1) ... Setting up mesa-common-dev (9.2.1-1ubuntu3) ... Setting up libx11-xcb-dev (2:1.6.1-1ubuntu1) ... Setting up libxcb-dri2-0-dev:arm64 (1.9.1-3ubuntu1) ... Setting up libxcb-glx0-dev:arm64 (1.9.1-3ubuntu1) ... Setting up x11proto-xext-dev (7.2.1-1) ... Setting up x11proto-fixes-dev (1:5.0-2ubuntu2) ... Setting up libxfixes-dev:arm64 (1:5.0.1-1ubuntu1) ... Setting up x11proto-damage-dev (1:1.2.1-2) ... Setting up libxdamage-dev:arm64 (1:1.1.4-1ubuntu1) ... Setting up libxext-dev:arm64 (2:1.3.2-1) ... Setting up x11proto-xf86vidmode-dev (2.3.1-2) ... Setting up libxxf86vm-dev:arm64 (1:1.1.3-1) ... Setting up x11proto-dri2-dev (2.8-2) ... Setting up x11proto-gl-dev (1.4.16-2) ... Setting up libgl1-mesa-dev (9.2.1-1ubuntu3) ... Setting up libglu1-mesa-dev (9.0.0-1) ... Setting up libice-dev:arm64 (2:1.0.8-2) ... Setting up libsm-dev:arm64 (2:1.2.1-2) ... Setting up libxt-dev:arm64 (1:1.1.4-1) ... Setting up freeglut3-dev:arm64 (2.8.1-1) ... Setting up libxi-dev (2:1.7.1.901-1ubuntu1) ... Setting up python3 (3.3.2-14ubuntu1) ... running python rtupdate hooks for python3.3... running python post-rtupdate hooks for python3.3... Setting up dh-python (1.20131003-1) ... Setting up apparmor-easyprof (2.8.0-0ubuntu31) ... Setting up dh-apparmor (2.8.0-0ubuntu31) ... Setting up debhelper (9.20130630ubuntu1) ... Setting up dh-autoreconf (9) ... Processing triggers for libc-bin ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.17-93ubuntu4 make_3.81-8.2ubuntu3 dpkg-dev_1.16.12ubuntu1 gcc-4.8_4.8.1-10ubuntu8 g++-4.8_4.8.1-10ubuntu8 binutils_2.23.52.20130913-0ubuntu1 libstdc++-4.8-dev_4.8.1-10ubuntu8 libstdc++6_4.8.1-10ubuntu8 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Tue Jun 25 15:11:35 2013 UTC using DSA key ID C09FD35A gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./maqview_0.2.5-6.dsc dpkg-source: info: extracting maqview in maqview-0.2.5 dpkg-source: info: unpacking maqview_0.2.5.orig.tar.gz dpkg-source: info: unpacking maqview_0.2.5-6.debian.tar.gz dpkg-source: info: applying fix-gcc-4.5.patch dpkg-source: info: applying gcc-4.7.patch dpkg-source: info: applying use-dpkg-buildflags.patch dpkg-source: info: applying fix-hurd-build.patch dpkg-buildpackage: source package maqview dpkg-buildpackage: source version 0.2.5-6 dpkg-source --before-build maqview-0.2.5 dpkg-buildpackage: host architecture arm64 /usr/bin/fakeroot debian/rules clean dh clean --with autoreconf dh_testdir debian/rules override_dh_auto_clean make[1]: Entering directory `/build/buildd/maqview-0.2.5' [ ! -f Makefile ] || /usr/bin/make distclean dh_auto_clean rm -f *.1 make[1]: Leaving directory `/build/buildd/maqview-0.2.5' dh_autoreconf_clean dh_clean debian/rules build-arch dh build-arch --with autoreconf dh_testdir -a debian/rules override_dh_autoreconf make[1]: Entering directory `/build/buildd/maqview-0.2.5' dh_autoreconf --as-needed configure.ac:5: installing './config.guess' configure.ac:5: installing './config.sub' configure.ac:3: installing './install-sh' configure.ac:3: installing './missing' Makefile.am: installing './depcomp' make -f Makefile.generic maqview.1 make[2]: Entering directory `/build/buildd/maqview-0.2.5' pod2man --center "Bioinformatics Tools" --release "maqview-0.2.4" maqview.pod > maqview.1 make[2]: Leaving directory `/build/buildd/maqview-0.2.5' ### The *.class files in the source package can be reproduced by simply running # javac MaqDataClient.java ### however, it is unclear whether this code is used at all make[1]: Leaving directory `/build/buildd/maqview-0.2.5' dh_auto_configure -a configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... none checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes configure: WARNING: Library libglut will be statically linked. checking GL/glut.h usability... yes checking GL/glut.h presence... yes checking for GL/glut.h... yes checking for glutMouseWheelFunc in -lglut... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --disable-maintainer-mode dh_auto_build -a make[1]: Entering directory `/build/buildd/maqview-0.2.5' make all-am make[2]: Entering directory `/build/buildd/maqview-0.2.5' gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c zrio_main.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c btree.c btree.c: In function 'btree_load': btree.c:284:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&ch, 1, 1, in); ^ btree.c:295:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&tree->left, sizeof(int64_t), 1, in); ^ btree.c:296:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&tree->right, sizeof(int64_t), 1, in); ^ btree.c:297:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(tree->indexs, sizeof(int64_t), 2, in); ^ btree.c:298:7: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread(&tree->size, sizeof(int), 1, in); ^ gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c maqmap_index.c maqmap_index.c: In function 'notify': maqmap_index.c:43:69: warning: unused parameter 'pos' [-Wunused-parameter] void notify(void *object, unsigned char *buf, int buf_size, int64_t pos){ ^ maqmap_index.c: In function 'read_map_index': maqmap_index.c:387:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(offset != l * sizeof(maplet)){ ^ maqmap_index.c: In function 'read_map_next_to': maqmap_index.c:403:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(let[size].seqid != ref_id) break; ^ gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c zrio.c zrio.c: In function 'get_max_dist': zrio.c:437:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(i=state->dist_window_tail;idmax;i++){ ^ zrio.c: In function 'build_index': zrio.c:466:24: warning: variable 'state' set but not used [-Wunused-but-set-variable] struct inflate_state *state; ^ zrio.c: In function 'load_access': zrio.c:351:38: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] #define my_read(file, buf, len) fread(buf, 1, len, file) ^ zrio.c:356:2: note: in expansion of macro 'my_read' my_read(in, &size, sizeof(int)); ^ zrio.c:351:38: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] #define my_read(file, buf, len) fread(buf, 1, len, file) ^ zrio.c:364:3: note: in expansion of macro 'my_read' my_read(in, &(p->out), sizeof(int64_t)); ^ zrio.c:351:38: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] #define my_read(file, buf, len) fread(buf, 1, len, file) ^ zrio.c:365:3: note: in expansion of macro 'my_read' my_read(in, &(p->in), sizeof(int64_t)); ^ zrio.c:351:38: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] #define my_read(file, buf, len) fread(buf, 1, len, file) ^ zrio.c:366:3: note: in expansion of macro 'my_read' my_read(in, &(p->bits), sizeof(int)); ^ g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -c -o stdhashc.o stdhashc.cc gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c cns_cache.c cns_cache.c: In function 'cns_cache_put': cns_cache.c:284:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(offset != cns->size * sizeof(cns_t)){ ^ cns_cache.c:321:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(offset != size * sizeof(cns_t)){ ^ cns_cache.c:361:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(offset != size * sizeof(cns_t)){ ^ cns_cache.c: In function 'open_cns_cache': cns_cache.c:193:8: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, "N_REF: %d\n", &cns->n_ref); ^ cns_cache.c:203:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, "REF_NAME:%s\n", cns->ref_name[i]); ^ cns_cache.c:204:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, "REF_LENGTH:%ld\n", cns->ref_lengths + i); ^ cns_cache.c:205:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, "REF_OFFSET:%ld\n", cns->ref_offsets + i); ^ gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c const.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c adler32.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c compress.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c crc32.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c deflate.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c gzio.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c inffast.c inffast.c: In function 'inflate_fast_zr': inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:394:4: note: in expansion of macro 'append_dist_window' append_dist_window(state, 0); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:469:9: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:477:10: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:489:9: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:496:7: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:498:7: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:500:7: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:505:7: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:508:8: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:516:7: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:518:7: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:520:7: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:525:7: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ inffast.c:320:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define append_dist_window(state, val) if(state->dist_window_tail >= state->dmax) state->dist_window_tail = 0;\ ^ inffast.c:528:8: note: in expansion of macro 'append_dist_window' append_dist_window(state, dist); ^ gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c inflate.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c infback.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c inftrees.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c trees.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c uncompr.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c zutil.c g++ -g -O2 -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -L/usr/lib -o zrio zrio_main.o btree.o maqmap_index.o zrio.o stdhashc.o cns_cache.o const.o adler32.o compress.o crc32.o deflate.o gzio.o inffast.o inflate.o infback.o inftrees.o trees.o uncompr.o zutil.o gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c maqmap_index_main.c maqmap_index_main.c: In function 'dump_map': maqmap_index_main.c:67:27: warning: unused parameter 'obj' [-Wunused-parameter] static int dump_map(void *obj, maplet *m1) ^ g++ -g -O2 -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -L/usr/lib -o maqindex maqmap_index_main.o btree.o maqmap_index.o zrio.o stdhashc.o cns_cache.o const.o adler32.o compress.o crc32.o deflate.o gzio.o inffast.o inflate.o infback.o inftrees.o trees.o uncompr.o zutil.o gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c read_cache.c gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c view_goto.c view_goto.c: In function 'view_resize': view_goto.c:192:41: warning: unused parameter 'h' [-Wunused-parameter] void view_resize(View *view, int w, int h){ ^ gcc -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -I/usr/include -DHAVE_FREEGLUT -g -O2 -Wformat -Werror=format-security -g -O2 -Wall -W -DMAQ_LONGREADS -c view_panel.c view_panel.c: In function 'default_pick': view_panel.c:1004:13: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(j=1;jcache->reads + refs->cache->offset + s, sizeof(Read) * size); ^ socket_view.c:27:70: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define my_write_full(fds, buffer, size) if(write(fds, buffer, size) != size) return -1 ^ socket_view.c:112:3: note: in expansion of macro 'my_write_full' my_write_full(sock, refs->cns->seqs + refs->cns->offset + m, sizeof(cns_t) * (size)); ^ socket_view.c: In function 'recv_maq_data': socket_view.c:51:74: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define my_read_full2(fds, buffer, size) if(read_full(fds, buffer, size) != size) return -1 ^ socket_view.c:133:20: note: in expansion of macro 'my_read_full2' if(info->rd_size) my_read_full2(sock, info->reads, sizeof(Read) * info->rd_size); ^ socket_view.c:51:74: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] #define my_read_full2(fds, buffer, size) if(read_full(fds, buffer, size) != size) return -1 ^ socket_view.c:139:21: note: in expansion of macro 'my_read_full2' if(info->cns_size) my_read_full2(sock, info->seqs, sizeof(cns_t) * info->cns_size); ^ socket_view.c: In function 'runViewServer': socket_view.c:291:44: warning: passing argument 3 of 'accept' from incompatible pointer type [enabled by default] sock = accept(server->socket, (struct sockaddr *)&clientname, &size); ^ In file included from socket_view.h:8:0, from socket_view.c:1: /usr/include/aarch64-linux-gnu/sys/socket.h:244:12: note: expected 'socklen_t * __restrict__' but argument is of type 'size_t *' extern int accept (int __fd, __SOCKADDR_ARG __addr, ^ socket_view.c: In function 'closeViewClient': socket_view.c:405:8: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] write(client->socket, &op, sizeof(op)); ^ g++ -g -O2 -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -L/usr/lib -o maqindex_socks read_cache.o view_goto.o socket_view.o btree.o maqmap_index.o zrio.o stdhashc.o cns_cache.o const.o adler32.o compress.o crc32.o deflate.o gzio.o inffast.o inflate.o infback.o inftrees.o trees.o uncompr.o zutil.o -Wl,-Bdynamic -lGL -lGLU -lglut -lm -lX11 -lXi make[2]: Leaving directory `/build/buildd/maqview-0.2.5' make[1]: Leaving directory `/build/buildd/maqview-0.2.5' dh_auto_test -a /usr/bin/fakeroot debian/rules binary-arch dh binary-arch --with autoreconf dh_testroot -a dh_prep -a dh_auto_install -a make[1]: Entering directory `/build/buildd/maqview-0.2.5' make[2]: Entering directory `/build/buildd/maqview-0.2.5' /bin/mkdir -p '/build/buildd/maqview-0.2.5/debian/maqview/usr/bin' /usr/bin/install -c zrio maqindex maqview maqindex_socks '/build/buildd/maqview-0.2.5/debian/maqview/usr/bin' make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/build/buildd/maqview-0.2.5' make[1]: Leaving directory `/build/buildd/maqview-0.2.5' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_lintian -a dh_perl -a dh_link -a dh_compress -a dh_fixperms -a dh_strip -a dh_strip debug symbol extraction: all non-arch-all packages for this build platform arm64: maqview dh_strip debug symbol extraction: packages to act on: maqview dh_strip debug symbol extraction: ignored packages: Using buildid for compat level >= 9 dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-deb: building package `maqview-dbgsym' in `../maqview-dbgsym_0.2.5-6_arm64.ddeb'. dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 118 pkgstriptranslations: processing maqview (in debian/maqview); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/maqview/DEBIAN/control, package maqview, directory debian/maqview pkgstripfiles: PNG optimization for package maqview took 0 s dpkg-deb: warning: 'debian/maqview/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `maqview' in `../maqview_0.2.5-6_arm64.deb'. dpkg-genchanges -B -mUbuntu Build Daemon >../maqview_0.2.5-6_arm64.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build maqview-0.2.5 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20131019-2032 Publishing debug debs. chroot-autobuild/build/buildd/maqview_0.2.5-6_arm64.deb: new debian package, version 2.0. size 269628 bytes: control archive=1237 bytes. 1253 bytes, 24 lines control 683 bytes, 11 lines md5sums Package: maqview Version: 0.2.5-6 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debian-Med Packaging Team Installed-Size: 553 Depends: freeglut3, libc6 (>= 2.17), libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libstdc++6 Section: science Priority: optional Homepage: http://maq.sourceforge.net/maqview.shtml Description: graphical read alignment viewer for short gene sequences Maqview is graphical read alignment viewer. It is specifically designed for the Maq alignment file and allows you to see the mismatches, base qualities and mapping qualities. Maqview is nothing fancy as Consed or GAP, but just a simple viewer for you to see what happens in a particular region. . In comparison to tgap-maq, the text-based read alignment viewer writen by James Bonfield, Maqview is faster and takes up much less memory and disk space in indexing. This is possibly because tgap aims to be a general-purpose viewer but Maqview fully makes use of the fact that a Maq alignment file has already been sorted. Maqview is also efficient in viewing and provides a command-line tool to quickly retrieve any region in an Maq alignment file. chroot-autobuild/build/buildd/maqview_0.2.5-6_arm64.deb: drwxr-xr-x root/root 0 2013-10-19 20:32 ./ drwxr-xr-x root/root 0 2013-10-19 20:32 ./usr/ drwxr-xr-x root/root 0 2013-10-19 20:32 ./usr/share/ drwxr-xr-x root/root 0 2013-10-19 20:32 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-10-19 20:32 ./usr/share/doc/maqview/ -rw-r--r-- root/root 1096 2008-03-22 03:06 ./usr/share/doc/maqview/NEWS.gz -rw-r--r-- root/root 914 2013-06-25 15:09 ./usr/share/doc/maqview/changelog.Debian.gz -rw-r--r-- root/root 576 2010-11-22 07:55 ./usr/share/doc/maqview/README.Debian -rw-r--r-- root/root 4592 2012-04-27 13:11 ./usr/share/doc/maqview/copyright -rw-r--r-- root/root 2121 2008-08-24 03:42 ./usr/share/doc/maqview/README.gz drwxr-xr-x root/root 0 2013-10-19 20:32 ./usr/share/lintian/ drwxr-xr-x root/root 0 2013-10-19 20:32 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 414 2012-04-27 21:49 ./usr/share/lintian/overrides/maqview drwxr-xr-x root/root 0 2013-10-19 20:32 ./usr/share/man/ drwxr-xr-x root/root 0 2013-10-19 20:32 ./usr/share/man/man1/ -rw-r--r-- root/root 3652 2013-10-19 20:32 ./usr/share/man/man1/maqview.1.gz drwxr-xr-x root/root 0 2013-10-19 20:32 ./usr/bin/ -rwxr-xr-x root/root 113752 2013-10-19 20:32 ./usr/bin/zrio -rwxr-xr-x root/root 126344 2013-10-19 20:32 ./usr/bin/maqindex_socks -rwxr-xr-x root/root 117888 2013-10-19 20:32 ./usr/bin/maqindex -rwxr-xr-x root/root 148952 2013-10-19 20:32 ./usr/bin/maqview maqview_0.2.5-6_arm64.changes: Format: 1.8 Date: Tue, 25 Jun 2013 17:04:23 +0200 Source: maqview Binary: maqview Architecture: arm64 Version: 0.2.5-6 Distribution: trusty Urgency: low Maintainer: Ubuntu Build Daemon Changed-By: Andreas Tille Description: maqview - graphical read alignment viewer for short gene sequences Closes: 713473 Changes: maqview (0.2.5-6) unstable; urgency=low . * debian/patches/fix-gcc-4.5.patch: Prevent from trying to link libglut statically. Closes: #713473 * debian/control: cme fix dpkg-control Checksums-Sha1: 89fef178c13a41f0cdc3930294f3b6461773ab16 269628 maqview_0.2.5-6_arm64.deb Checksums-Sha256: 769e1ea95f85e982b5cebc0e03473e8c84215f06c7030ad415bba10a7c024c67 269628 maqview_0.2.5-6_arm64.deb Files: 40fe8e8e78c1a66dfae0d1680f5d4d80 269628 science optional maqview_0.2.5-6_arm64.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20131019-2032 Build needed 00:00:37, 6828k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-5123048'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-5123048/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-5123048'] Unmounting chroot for build PACKAGEBUILD-5123048... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-5123048'] Removing build PACKAGEBUILD-5123048