RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '36ca17381ea33caa28d007ffe6fe67556c9824ad', '/home/buildd/filecache-default/1072168715032372000a2363264a1d6c9c33a9f2'] Synching the system clock with the buildd NTP service... 12 Dec 18:05:16 ntpdate[10356]: adjust time server 10.211.37.1 offset -0.000213 sec Unpacking chroot for build 36ca17381ea33caa28d007ffe6fe67556c9824ad RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '36ca17381ea33caa28d007ffe6fe67556c9824ad'] Mounting chroot for build 36ca17381ea33caa28d007ffe6fe67556c9824ad RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '36ca17381ea33caa28d007ffe6fe67556c9824ad', 'deb http://ftpmaster.internal/ubuntu precise main universe'] Overriding sources.list in build-36ca17381ea33caa28d007ffe6fe67556c9824ad RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '36ca17381ea33caa28d007ffe6fe67556c9824ad', 'amd64'] Updating debian chroot for build 36ca17381ea33caa28d007ffe6fe67556c9824ad Ign http://ftpmaster.internal precise InRelease Get:1 http://ftpmaster.internal precise Release.gpg [198 B] Get:2 http://ftpmaster.internal precise Release [49.6 kB] Get:3 http://ftpmaster.internal precise/main amd64 Packages [1255 kB] Get:4 http://ftpmaster.internal precise/universe amd64 Packages [4656 kB] Get:5 http://ftpmaster.internal precise/main i386 Packages [1255 kB] Get:6 http://ftpmaster.internal precise/universe i386 Packages [4665 kB] Get:7 http://ftpmaster.internal precise/main TranslationIndex [3502 B] Get:8 http://ftpmaster.internal precise/universe TranslationIndex [2712 B] Get:9 http://ftpmaster.internal precise/main Translation-en [711 kB] Get:10 http://ftpmaster.internal precise/universe Translation-en [3296 kB] Fetched 15.9 MB in 11s (1421 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libasn1-8-heimdal libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libkrb5-26-heimdal libroken18-heimdal libsqlite3-0 libwind0-heimdal The following packages will be upgraded: base-files base-passwd bash binutils coreutils cpp-4.6 debconf debianutils dpkg dpkg-dev fakeroot g++-4.6 gcc-4.6 gcc-4.6-base gnupg gpgv initramfs-tools initramfs-tools-bin initscripts iproute klibc-utils libacl1 libalgorithm-diff-xs-perl libattr1 libc-bin libc-dev-bin libc6 libc6-dev libclass-isa-perl libcurl3-gnutls libdb5.1 libdpkg-perl libgcc1 libglib2.0-0 libgnutls26 libgomp1 libgssapi-krb5-2 libidn11 libk5crypto3 libklibc libkrb5-3 libkrb5support0 libldap-2.4-2 libmpfr4 libncurses5 libncursesw5 libp11-kit0 libquadmath0 libreadline6 libsasl2-2 libselinux1 libstdc++6 libstdc++6-4.6-dev libtinfo5 libudev0 linux-libc-dev locales login lsb-base module-init-tools multiarch-support ncurses-base ncurses-bin passwd perl perl-base perl-modules pkg-create-dbgsym pkgbinarymangler procps python-minimal python2.7-minimal readline-common sysv-rc sysvinit-utils tar ubuntu-keyring udev 78 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. Need to get 63.2 MB of archives. After this operation, 10.1 MB disk space will be freed. WARNING: The following packages cannot be authenticated! base-files debianutils bash libc-dev-bin libc6-dev libc-bin libc6 linux-libc-dev libgomp1 gcc-4.6-base libgcc1 cpp-4.6 libquadmath0 libstdc++6-4.6-dev g++-4.6 gcc-4.6 libstdc++6 libmpfr4 binutils libattr1 libacl1 dpkg coreutils login libncursesw5 libtinfo5 libncurses5 ncurses-bin perl libalgorithm-diff-xs-perl perl-base perl-modules libclass-isa-perl libdb5.1 tar base-passwd ncurses-base python2.7-minimal python-minimal readline-common libreadline6 debconf libselinux1 libsqlite3-0 libglib2.0-0 libudev0 module-init-tools libroken18-heimdal libasn1-8-heimdal libp11-kit0 libgnutls26 libk5crypto3 libgssapi-krb5-2 libkrb5-3 libkrb5support0 libidn11 libhcrypto4-heimdal libheimbase1-heimdal libwind0-heimdal libhx509-5-heimdal libkrb5-26-heimdal libheimntlm0-heimdal libgssapi3-heimdal libsasl2-2 libldap-2.4-2 libcurl3-gnutls gpgv gnupg ubuntu-keyring lsb-base multiarch-support passwd initramfs-tools initramfs-tools-bin klibc-utils libklibc sysvinit-utils sysv-rc initscripts procps udev iproute locales dpkg-dev libdpkg-perl fakeroot pkg-create-dbgsym pkgbinarymangler Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise/main base-files amd64 6.5ubuntu3 [67.0 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise/main debianutils amd64 4.1 [63.3 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise/main bash amd64 4.2-1ubuntu1 [641 kB] Get:4 http://ftpmaster.internal/ubuntu/ precise/main libc-dev-bin amd64 2.13-20ubuntu10 [82.1 kB] Get:5 http://ftpmaster.internal/ubuntu/ precise/main libc6-dev amd64 2.13-20ubuntu10 [2575 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise/main libc-bin amd64 2.13-20ubuntu10 [994 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise/main libc6 amd64 2.13-20ubuntu10 [4301 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise/main linux-libc-dev amd64 3.2.0-4.10 [822 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise/main libgomp1 amd64 4.6.2-7ubuntu1 [25.4 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise/main gcc-4.6-base amd64 4.6.2-7ubuntu1 [15.8 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise/main libgcc1 amd64 1:4.6.2-7ubuntu1 [42.6 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise/main cpp-4.6 amd64 4.6.2-7ubuntu1 [4833 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise/main libquadmath0 amd64 4.6.2-7ubuntu1 [126 kB] Get:14 http://ftpmaster.internal/ubuntu/ precise/main libstdc++6-4.6-dev amd64 4.6.2-7ubuntu1 [1645 kB] Get:15 http://ftpmaster.internal/ubuntu/ precise/main g++-4.6 amd64 4.6.2-7ubuntu1 [6977 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise/main gcc-4.6 amd64 4.6.2-7ubuntu1 [7541 kB] Get:17 http://ftpmaster.internal/ubuntu/ precise/main libstdc++6 amd64 4.6.2-7ubuntu1 [320 kB] Get:18 http://ftpmaster.internal/ubuntu/ precise/main libmpfr4 amd64 3.1.0-3 [201 kB] Get:19 http://ftpmaster.internal/ubuntu/ precise/main binutils amd64 2.22-2ubuntu1 [2637 kB] Get:20 http://ftpmaster.internal/ubuntu/ precise/main libattr1 amd64 1:2.4.46-3ubuntu1 [10.9 kB] Get:21 http://ftpmaster.internal/ubuntu/ precise/main libacl1 amd64 2.2.51-4ubuntu1 [18.0 kB] Get:22 http://ftpmaster.internal/ubuntu/ precise/main dpkg amd64 1.16.1.2ubuntu3 [1829 kB] Get:23 http://ftpmaster.internal/ubuntu/ precise/main coreutils amd64 8.13-3ubuntu2 [2610 kB] Get:24 http://ftpmaster.internal/ubuntu/ precise/main login amd64 1:4.1.4.2+svn3283-3ubuntu3 [287 kB] Get:25 http://ftpmaster.internal/ubuntu/ precise/main libncursesw5 amd64 5.9-4 [137 kB] Get:26 http://ftpmaster.internal/ubuntu/ precise/main libtinfo5 amd64 5.9-4 [95.3 kB] Get:27 http://ftpmaster.internal/ubuntu/ precise/main libncurses5 amd64 5.9-4 [114 kB] Get:28 http://ftpmaster.internal/ubuntu/ precise/main ncurses-bin amd64 5.9-4 [151 kB] Get:29 http://ftpmaster.internal/ubuntu/ precise/main perl amd64 5.14.2-6 [4398 kB] Get:30 http://ftpmaster.internal/ubuntu/ precise/main libalgorithm-diff-xs-perl amd64 0.04-2build2 [12.4 kB] Get:31 http://ftpmaster.internal/ubuntu/ precise/main perl-base amd64 5.14.2-6 [1456 kB] Get:32 http://ftpmaster.internal/ubuntu/ precise/main perl-modules all 5.14.2-6 [3369 kB] Get:33 http://ftpmaster.internal/ubuntu/ precise/main libclass-isa-perl all 0.36-3 [11.9 kB] Get:34 http://ftpmaster.internal/ubuntu/ precise/main libdb5.1 amd64 5.1.25-11build1 [700 kB] Get:35 http://ftpmaster.internal/ubuntu/ precise/main tar amd64 1.26-3ubuntu1 [219 kB] Get:36 http://ftpmaster.internal/ubuntu/ precise/main base-passwd amd64 3.5.24 [39.1 kB] Get:37 http://ftpmaster.internal/ubuntu/ precise/main ncurses-base all 5.9-4 [21.0 kB] Get:38 http://ftpmaster.internal/ubuntu/ precise/main python2.7-minimal amd64 2.7.2-8build1 [1642 kB] Get:39 http://ftpmaster.internal/ubuntu/ precise/main python-minimal all 2.7.2-9ubuntu1 [29.7 kB] Get:40 http://ftpmaster.internal/ubuntu/ precise/main readline-common amd64 6.2-8 [49.9 kB] Get:41 http://ftpmaster.internal/ubuntu/ precise/main libreadline6 amd64 6.2-8 [139 kB] Get:42 http://ftpmaster.internal/ubuntu/ precise/main debconf amd64 1.5.41ubuntu1 [145 kB] Get:43 http://ftpmaster.internal/ubuntu/ precise/main libselinux1 amd64 2.1.0-4ubuntu1 [62.4 kB] Get:44 http://ftpmaster.internal/ubuntu/ precise/main libsqlite3-0 amd64 3.7.9-2ubuntu1 [348 kB] Get:45 http://ftpmaster.internal/ubuntu/ precise/main libglib2.0-0 amd64 2.31.2-0ubuntu2 [1159 kB] Get:46 http://ftpmaster.internal/ubuntu/ precise/main libudev0 amd64 175-0ubuntu2 [29.4 kB] Get:47 http://ftpmaster.internal/ubuntu/ precise/main module-init-tools amd64 3.16-1ubuntu2 [105 kB] Get:48 http://ftpmaster.internal/ubuntu/ precise/main libroken18-heimdal amd64 1.5.dfsg.1-3 [44.8 kB] Get:49 http://ftpmaster.internal/ubuntu/ precise/main libasn1-8-heimdal amd64 1.5.dfsg.1-3 [207 kB] Get:50 http://ftpmaster.internal/ubuntu/ precise/main libp11-kit0 amd64 0.8-2 [34.3 kB] Get:51 http://ftpmaster.internal/ubuntu/ precise/main libgnutls26 amd64 2.12.14-3 [459 kB] Get:52 http://ftpmaster.internal/ubuntu/ precise/main libk5crypto3 amd64 1.9.1+dfsg-3ubuntu1 [81.8 kB] Get:53 http://ftpmaster.internal/ubuntu/ precise/main libgssapi-krb5-2 amd64 1.9.1+dfsg-3ubuntu1 [118 kB] Get:54 http://ftpmaster.internal/ubuntu/ precise/main libkrb5-3 amd64 1.9.1+dfsg-3ubuntu1 [348 kB] Get:55 http://ftpmaster.internal/ubuntu/ precise/main libkrb5support0 amd64 1.9.1+dfsg-3ubuntu1 [23.8 kB] Get:56 http://ftpmaster.internal/ubuntu/ precise/main libidn11 amd64 1.23-1 [112 kB] Get:57 http://ftpmaster.internal/ubuntu/ precise/main libhcrypto4-heimdal amd64 1.5.dfsg.1-3 [101 kB] Get:58 http://ftpmaster.internal/ubuntu/ precise/main libheimbase1-heimdal amd64 1.5.dfsg.1-3 [12.0 kB] Get:59 http://ftpmaster.internal/ubuntu/ precise/main libwind0-heimdal amd64 1.5.dfsg.1-3 [77.5 kB] Get:60 http://ftpmaster.internal/ubuntu/ precise/main libhx509-5-heimdal amd64 1.5.dfsg.1-3 [124 kB] Get:61 http://ftpmaster.internal/ubuntu/ precise/main libkrb5-26-heimdal amd64 1.5.dfsg.1-3 [218 kB] Get:62 http://ftpmaster.internal/ubuntu/ precise/main libheimntlm0-heimdal amd64 1.5.dfsg.1-3 [15.8 kB] Get:63 http://ftpmaster.internal/ubuntu/ precise/main libgssapi3-heimdal amd64 1.5.dfsg.1-3 [107 kB] Get:64 http://ftpmaster.internal/ubuntu/ precise/main libsasl2-2 amd64 2.1.24~rc1.dfsg1+cvs2011-05-23-4ubuntu3 [70.3 kB] Get:65 http://ftpmaster.internal/ubuntu/ precise/main libldap-2.4-2 amd64 2.4.25-4ubuntu1 [184 kB] Get:66 http://ftpmaster.internal/ubuntu/ precise/main libcurl3-gnutls amd64 7.22.0-3ubuntu1 [227 kB] Get:67 http://ftpmaster.internal/ubuntu/ precise/main gpgv amd64 1.4.11-3ubuntu2 [185 kB] Get:68 http://ftpmaster.internal/ubuntu/ precise/main gnupg amd64 1.4.11-3ubuntu2 [808 kB] Get:69 http://ftpmaster.internal/ubuntu/ precise/main ubuntu-keyring amd64 2011.11.21 [11.4 kB] Get:70 http://ftpmaster.internal/ubuntu/ precise/main lsb-base all 4.0-0ubuntu17 [10.5 kB] Get:71 http://ftpmaster.internal/ubuntu/ precise/main multiarch-support amd64 2.13-20ubuntu10 [4476 B] Get:72 http://ftpmaster.internal/ubuntu/ precise/main passwd amd64 1:4.1.4.2+svn3283-3ubuntu3 [950 kB] Get:73 http://ftpmaster.internal/ubuntu/ precise/main initramfs-tools amd64 0.99ubuntu9 [48.6 kB] Get:74 http://ftpmaster.internal/ubuntu/ precise/main initramfs-tools-bin amd64 0.99ubuntu9 [11.9 kB] Get:75 http://ftpmaster.internal/ubuntu/ precise/main klibc-utils amd64 1.5.25-1ubuntu1 [181 kB] Get:76 http://ftpmaster.internal/ubuntu/ precise/main libklibc amd64 1.5.25-1ubuntu1 [45.7 kB] Get:77 http://ftpmaster.internal/ubuntu/ precise/main sysvinit-utils amd64 2.88dsf-13.10ubuntu7 [63.7 kB] Get:78 http://ftpmaster.internal/ubuntu/ precise/main sysv-rc all 2.88dsf-13.10ubuntu7 [44.0 kB] Get:79 http://ftpmaster.internal/ubuntu/ precise/main initscripts amd64 2.88dsf-13.10ubuntu7 [27.3 kB] Get:80 http://ftpmaster.internal/ubuntu/ precise/main procps amd64 1:3.2.8-11ubuntu5 [235 kB] Get:81 http://ftpmaster.internal/ubuntu/ precise/main udev amd64 175-0ubuntu2 [323 kB] Get:82 http://ftpmaster.internal/ubuntu/ precise/main iproute amd64 20111117-1 [446 kB] Get:83 http://ftpmaster.internal/ubuntu/ precise/main locales all 2.13+git20111116-1 [3349 kB] Get:84 http://ftpmaster.internal/ubuntu/ precise/main dpkg-dev amd64 1.16.1.2ubuntu3 [468 kB] Get:85 http://ftpmaster.internal/ubuntu/ precise/main libdpkg-perl amd64 1.16.1.2ubuntu3 [181 kB] Get:86 http://ftpmaster.internal/ubuntu/ precise/main fakeroot amd64 1.18.2-1 [87.2 kB] Get:87 http://ftpmaster.internal/ubuntu/ precise/main pkg-create-dbgsym all 0.50 [8334 B] Get:88 http://ftpmaster.internal/ubuntu/ precise/main pkgbinarymangler all 110 [29.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 63.2 MB in 2s (23.8 MB/s) (Reading database ... 14111 files and directories currently installed.) Preparing to replace base-files 6.5ubuntu2 (using .../base-files_6.5ubuntu3_amd64.deb) ... Unpacking replacement base-files ... Setting up base-files (6.5ubuntu3) ... (Reading database ... 14111 files and directories currently installed.) Preparing to replace debianutils 4.0.4 (using .../debianutils_4.1_amd64.deb) ... Unpacking replacement debianutils ... Setting up debianutils (4.1) ... (Reading database ... 14111 files and directories currently installed.) Preparing to replace bash 4.2-0ubuntu4 (using .../bash_4.2-1ubuntu1_amd64.deb) ... Unpacking replacement bash ... Setting up bash (4.2-1ubuntu1) ... Installing new version of config file /etc/skel/.bashrc ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode. (Reading database ... 14112 files and directories currently installed.) Preparing to replace libc-dev-bin 2.13-20ubuntu5 (using .../libc-dev-bin_2.13-20ubuntu10_amd64.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace libc6-dev 2.13-20ubuntu5 (using .../libc6-dev_2.13-20ubuntu10_amd64.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc-bin 2.13-20ubuntu5 (using .../libc-bin_2.13-20ubuntu10_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.13-20ubuntu10) ... (Reading database ... 14112 files and directories currently installed.) Preparing to replace libc6 2.13-20ubuntu5 (using .../libc6_2.13-20ubuntu10_amd64.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.13-20ubuntu10) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14112 files and directories currently installed.) Preparing to replace linux-libc-dev 3.1.0-2.3 (using .../linux-libc-dev_3.2.0-4.10_amd64.deb) ... Unpacking replacement linux-libc-dev ... Preparing to replace libgomp1 4.6.2-2ubuntu1 (using .../libgomp1_4.6.2-7ubuntu1_amd64.deb) ... Unpacking replacement libgomp1 ... Preparing to replace gcc-4.6-base 4.6.2-2ubuntu1 (using .../gcc-4.6-base_4.6.2-7ubuntu1_amd64.deb) ... Unpacking replacement gcc-4.6-base ... Setting up gcc-4.6-base (4.6.2-7ubuntu1) ... (Reading database ... 14113 files and directories currently installed.) Preparing to replace libgcc1 1:4.6.2-2ubuntu1 (using .../libgcc1_1%3a4.6.2-7ubuntu1_amd64.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.6.2-7ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 14113 files and directories currently installed.) Preparing to replace cpp-4.6 4.6.2-2ubuntu1 (using .../cpp-4.6_4.6.2-7ubuntu1_amd64.deb) ... Unpacking replacement cpp-4.6 ... Preparing to replace libquadmath0 4.6.2-2ubuntu1 (using .../libquadmath0_4.6.2-7ubuntu1_amd64.deb) ... Unpacking replacement libquadmath0 ... 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(Reading database ... 14189 files and directories currently installed.) Preparing to replace base-passwd 3.5.23 (using .../base-passwd_3.5.24_amd64.deb) ... Unpacking replacement base-passwd ... Setting up base-passwd (3.5.24) ... (Reading database ... 14189 files and directories currently installed.) Preparing to replace ncurses-base 5.9-2 (using .../ncurses-base_5.9-4_all.deb) ... Unpacking replacement ncurses-base ... Setting up ncurses-base (5.9-4) ... Installing new version of config file /etc/terminfo/README ... (Reading database ... 14189 files and directories currently installed.) Preparing to replace python2.7-minimal 2.7.2-5ubuntu1 (using .../python2.7-minimal_2.7.2-8build1_amd64.deb) ... Unpacking replacement python2.7-minimal ... Setting up python2.7-minimal (2.7.2-8build1) ... (Reading database ... 14189 files and directories currently installed.) Preparing to replace python-minimal 2.7.2-7ubuntu4 (using .../python-minimal_2.7.2-9ubuntu1_all.deb) ... 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Preparing to replace libselinux1 2.1.0-1 (using .../libselinux1_2.1.0-4ubuntu1_amd64.deb) ... Unpacking replacement libselinux1 ... Setting up libselinux1 (2.1.0-4ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Selecting previously unselected package libsqlite3-0. (Reading database ... 14186 files and directories currently installed.) Unpacking libsqlite3-0 (from .../libsqlite3-0_3.7.9-2ubuntu1_amd64.deb) ... Preparing to replace libglib2.0-0 2.30.1-2ubuntu1 (using .../libglib2.0-0_2.31.2-0ubuntu2_amd64.deb) ... Unpacking replacement libglib2.0-0 ... Preparing to replace libudev0 175-0ubuntu1 (using .../libudev0_175-0ubuntu2_amd64.deb) ... Unpacking replacement libudev0 ... Preparing to replace module-init-tools 3.16-1ubuntu1 (using .../module-init-tools_3.16-1ubuntu2_amd64.deb) ... Unpacking replacement module-init-tools ... Selecting previously unselected package libroken18-heimdal. Unpacking libroken18-heimdal (from .../libroken18-heimdal_1.5.dfsg.1-3_amd64.deb) ... Selecting previously unselected package libasn1-8-heimdal. Unpacking libasn1-8-heimdal (from .../libasn1-8-heimdal_1.5.dfsg.1-3_amd64.deb) ... Preparing to replace libp11-kit0 0.7-2ubuntu2 (using .../libp11-kit0_0.8-2_amd64.deb) ... Unpacking replacement libp11-kit0 ... Preparing to replace libgnutls26 2.12.11-1 (using .../libgnutls26_2.12.14-3_amd64.deb) ... Unpacking replacement libgnutls26 ... Preparing to replace libk5crypto3 1.9.1+dfsg-1ubuntu2.1 (using .../libk5crypto3_1.9.1+dfsg-3ubuntu1_amd64.deb) ... Unpacking replacement libk5crypto3 ... Preparing to replace libgssapi-krb5-2 1.9.1+dfsg-1ubuntu2.1 (using .../libgssapi-krb5-2_1.9.1+dfsg-3ubuntu1_amd64.deb) ... Unpacking replacement libgssapi-krb5-2 ... Preparing to replace libkrb5-3 1.9.1+dfsg-1ubuntu2.1 (using .../libkrb5-3_1.9.1+dfsg-3ubuntu1_amd64.deb) ... Unpacking replacement libkrb5-3 ... Preparing to replace libkrb5support0 1.9.1+dfsg-1ubuntu2.1 (using .../libkrb5support0_1.9.1+dfsg-3ubuntu1_amd64.deb) ... Unpacking replacement libkrb5support0 ... Preparing to replace libidn11 1.22-3 (using .../libidn11_1.23-1_amd64.deb) ... Unpacking replacement libidn11 ... Selecting previously unselected package libhcrypto4-heimdal. Unpacking libhcrypto4-heimdal (from .../libhcrypto4-heimdal_1.5.dfsg.1-3_amd64.deb) ... Selecting previously unselected package libheimbase1-heimdal. Unpacking libheimbase1-heimdal (from .../libheimbase1-heimdal_1.5.dfsg.1-3_amd64.deb) ... Selecting previously unselected package libwind0-heimdal. Unpacking libwind0-heimdal (from .../libwind0-heimdal_1.5.dfsg.1-3_amd64.deb) ... Selecting previously unselected package libhx509-5-heimdal. Unpacking libhx509-5-heimdal (from .../libhx509-5-heimdal_1.5.dfsg.1-3_amd64.deb) ... Selecting previously unselected package libkrb5-26-heimdal. Unpacking libkrb5-26-heimdal (from .../libkrb5-26-heimdal_1.5.dfsg.1-3_amd64.deb) ... Selecting previously unselected package libheimntlm0-heimdal. Unpacking libheimntlm0-heimdal (from .../libheimntlm0-heimdal_1.5.dfsg.1-3_amd64.deb) ... Selecting previously unselected package libgssapi3-heimdal. Unpacking libgssapi3-heimdal (from .../libgssapi3-heimdal_1.5.dfsg.1-3_amd64.deb) ... Preparing to replace libsasl2-2 2.1.24~rc1.dfsg1+cvs2011-05-23-4ubuntu2 (using .../libsasl2-2_2.1.24~rc1.dfsg1+cvs2011-05-23-4ubuntu3_amd64.deb) ... Unpacking replacement libsasl2-2 ... Preparing to replace libldap-2.4-2 2.4.25-3ubuntu1 (using .../libldap-2.4-2_2.4.25-4ubuntu1_amd64.deb) ... Unpacking replacement libldap-2.4-2 ... Preparing to replace libcurl3-gnutls 7.21.7-3ubuntu1 (using .../libcurl3-gnutls_7.22.0-3ubuntu1_amd64.deb) ... Unpacking replacement libcurl3-gnutls ... Preparing to replace gpgv 1.4.11-3ubuntu1 (using .../gpgv_1.4.11-3ubuntu2_amd64.deb) ... Unpacking replacement gpgv ... Setting up gpgv (1.4.11-3ubuntu2) ... (Reading database ... 14246 files and directories currently installed.) Preparing to replace gnupg 1.4.11-3ubuntu1 (using .../gnupg_1.4.11-3ubuntu2_amd64.deb) ... Unpacking replacement gnupg ... Setting up gnupg (1.4.11-3ubuntu2) ... (Reading database ... 14246 files and directories currently installed.) Preparing to replace ubuntu-keyring 2010.+09.30 (using .../ubuntu-keyring_2011.11.21_amd64.deb) ... Unpacking replacement ubuntu-keyring ... Setting up ubuntu-keyring (2011.11.21) ... gpg: key 437D05B5: "Ubuntu Archive Automatic Signing Key " not changed gpg: key FBB75451: "Ubuntu CD Image Automatic Signing Key " not changed gpg: Total number processed: 2 gpg: unchanged: 2 (Reading database ... 14246 files and directories currently installed.) Preparing to replace lsb-base 4.0-0ubuntu16 (using .../lsb-base_4.0-0ubuntu17_all.deb) ... Unpacking replacement lsb-base ... Setting up lsb-base (4.0-0ubuntu17) ... 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Adding 'diversion of /sbin/udevadm to /sbin/udevadm.upgrade by fake-udev' Unpacking replacement udev ... Preparing to replace iproute 20110629-1 (using .../iproute_20111117-1_amd64.deb) ... Unpacking replacement iproute ... Preparing to replace locales 2.13+git20110622-2 (using .../locales_2.13+git20111116-1_all.deb) ... Unpacking replacement locales ... Preparing to replace dpkg-dev 1.16.1.1ubuntu3 (using .../dpkg-dev_1.16.1.2ubuntu3_amd64.deb) ... Unpacking replacement dpkg-dev ... Preparing to replace libdpkg-perl 1.16.1.1ubuntu3 (using .../libdpkg-perl_1.16.1.2ubuntu3_amd64.deb) ... Unpacking replacement libdpkg-perl ... Preparing to replace fakeroot 1.18.1-1 (using .../fakeroot_1.18.2-1_amd64.deb) ... Unpacking replacement fakeroot ... Preparing to replace pkg-create-dbgsym 0.49 (using .../pkg-create-dbgsym_0.50_all.deb) ... Unpacking replacement pkg-create-dbgsym ... Preparing to replace pkgbinarymangler 105 (using .../pkgbinarymangler_110_all.deb) ... Unpacking replacement pkgbinarymangler ... Setting up libc-dev-bin (2.13-20ubuntu10) ... Setting up linux-libc-dev (3.2.0-4.10) ... Setting up libc6-dev (2.13-20ubuntu10) ... Setting up libgomp1 (4.6.2-7ubuntu1) ... Setting up libmpfr4 (3.1.0-3) ... Setting up cpp-4.6 (4.6.2-7ubuntu1) ... Setting up libquadmath0 (4.6.2-7ubuntu1) ... Setting up binutils (2.22-2ubuntu1) ... Setting up gcc-4.6 (4.6.2-7ubuntu1) ... Setting up libncursesw5 (5.9-4) ... Setting up libclass-isa-perl (0.36-3) ... Setting up libsqlite3-0 (3.7.9-2ubuntu1) ... Setting up libglib2.0-0 (2.31.2-0ubuntu2) ... Setting up libudev0 (175-0ubuntu2) ... Setting up module-init-tools (3.16-1ubuntu2) ... Setting up libroken18-heimdal (1.5.dfsg.1-3) ... Setting up libasn1-8-heimdal (1.5.dfsg.1-3) ... Setting up libp11-kit0 (0.8-2) ... Setting up libgnutls26 (2.12.14-3) ... Setting up libkrb5support0 (1.9.1+dfsg-3ubuntu1) ... Setting up libk5crypto3 (1.9.1+dfsg-3ubuntu1) ... Setting up libkrb5-3 (1.9.1+dfsg-3ubuntu1) ... Setting up libgssapi-krb5-2 (1.9.1+dfsg-3ubuntu1) ... Setting up libidn11 (1.23-1) ... Setting up libhcrypto4-heimdal (1.5.dfsg.1-3) ... Setting up libheimbase1-heimdal (1.5.dfsg.1-3) ... Setting up libwind0-heimdal (1.5.dfsg.1-3) ... Setting up libhx509-5-heimdal (1.5.dfsg.1-3) ... Setting up libkrb5-26-heimdal (1.5.dfsg.1-3) ... Setting up libheimntlm0-heimdal (1.5.dfsg.1-3) ... Setting up libgssapi3-heimdal (1.5.dfsg.1-3) ... Setting up libsasl2-2 (2.1.24~rc1.dfsg1+cvs2011-05-23-4ubuntu3) ... Setting up libldap-2.4-2 (2.4.25-4ubuntu1) ... Setting up libcurl3-gnutls (7.22.0-3ubuntu1) ... Setting up initramfs-tools-bin (0.99ubuntu9) ... Setting up libklibc (1.5.25-1ubuntu1) ... Setting up klibc-utils (1.5.25-1ubuntu1) ... Setting up sysvinit-utils (2.88dsf-13.10ubuntu7) ... Setting up sysv-rc (2.88dsf-13.10ubuntu7) ... Setting up initscripts (2.88dsf-13.10ubuntu7) ... guest environment detected: Linking /run/shm to /dev/shm Setting up procps (1:3.2.8-11ubuntu5) ... Installing new version of config file /etc/init/procps.conf ... invoke-rc.d: policy-rc.d denied execution of start. Setting up iproute (20111117-1) ... Setting up locales (2.13+git20111116-1) ... Setting up fakeroot (1.18.2-1) ... Setting up pkg-create-dbgsym (0.50) ... Setting up pkgbinarymangler (110) ... Installing new version of config file /etc/pkgbinarymangler/striptranslations.blacklist ... Setting up libstdc++6-4.6-dev (4.6.2-7ubuntu1) ... Setting up perl-modules (5.14.2-6) ... Setting up perl (5.14.2-6) ... Setting up libalgorithm-diff-xs-perl (0.04-2build2) ... Setting up udev (175-0ubuntu2) ... Installing new version of config file /etc/init/udev.conf ... invoke-rc.d: policy-rc.d denied execution of restart. Removing 'diversion of /sbin/udevadm to /sbin/udevadm.upgrade by fake-udev' update-initramfs: deferring update (trigger activated) Setting up initramfs-tools (0.99ubuntu9) ... update-initramfs: deferring update (trigger activated) Setting up libdpkg-perl (1.16.1.2ubuntu3) ... Setting up dpkg-dev (1.16.1.2ubuntu3) ... Setting up g++-4.6 (4.6.2-7ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '36ca17381ea33caa28d007ffe6fe67556c9824ad', 'amd64', 'precise', '--nolog', '--batch', '--archive=ubuntu', '--dist=precise', '--purpose=PRIMARY', '--architecture=amd64', '--comp=universe', 'massxpert_3.2.0-2.dsc'] Initiating build 36ca17381ea33caa28d007ffe6fe67556c9824ad with 2 processor cores. Automatic build of massxpert_3.2.0-2 on crested by sbuild/amd64 1.170.5 Build started at 20111212-1812 ****************************************************************************** massxpert_3.2.0-2.dsc exists in cwd sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 7.0.50~), libqt4-dev (>= 4.4.3), cmake (>= 2.6.0), texlive-latex-recommended, texlive-fonts-recommended sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) Checking for already installed source dependencies... debhelper: missing libqt4-dev: missing cmake: missing texlive-latex-recommended: missing texlive-fonts-recommended: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper libqt4-dev cmake texlive-latex-recommended texlive-fonts-recommended Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils cmake-data ed emacsen-common file fontconfig fontconfig-config gettext gettext-base groff-base html2text intltool-debian libarchive1 libaudio2 libcroco3 libcurl3 libexpat1 libfontconfig1 libfreetype6 libgettextpo0 libice6 libjpeg8 libkpathsea5 liblcms1 libmagic1 libmng1 libpaper-utils libpaper1 libpipeline1 libpoppler19 libpthread-stubs0 libpthread-stubs0-dev libqt4-dbus libqt4-declarative libqt4-designer libqt4-help libqt4-network libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtgui4 libsm6 libtiff4 libunistring0 libx11-6 libx11-data libx11-dev libxau-dev libxau6 libxaw7 libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 libxext6 libxi6 libxml2 libxmlrpc-core-c3 libxmu6 libxpm4 libxrender1 libxt6 luatex man-db mime-support po-debconf qdbus qt4-linguist-tools qt4-qmake tex-common texlive-base texlive-binaries texlive-common texlive-doc-base texlive-latex-base ttf-dejavu-core ucf x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev xorg-sgml-doctools xtrans-dev Suggested packages: wamerican wordlist whois vacation dh-make defoma gettext-doc groff nas liblcms-utils poppler-data libqt4-declarative-folderlistmodel libqt4-declarative-gestures libqt4-declarative-particles libqt4-declarative-shaders qt4-qmlviewer libmysqlclient-dev libpq-dev libsqlite3-dev qt4-dev-tools qt4-doc unixodbc-dev qt4-qtconfig less www-browser libmail-box-perl perl-tk ghostscript xpdf-reader pdf-viewer gv postscript-viewer Recommended packages: curl wget lynx-cur libqt4-opengl-dev libqtwebkit-dev libqt4-sql-mysql libqt4-sql-odbc libqt4-sql-psql libqt4-sql-sqlite libcups2 libx11-doc xml-core texlive-luatex libmail-sendmail-perl lmodern texlive-fonts-recommended-doc tipa texlive-latex-base-doc texlive-latex-recommended-doc prosper latex-beamer latex-xcolor The following NEW packages will be installed: bsdmainutils cmake cmake-data debhelper ed emacsen-common file fontconfig fontconfig-config gettext gettext-base groff-base html2text intltool-debian libarchive1 libaudio2 libcroco3 libcurl3 libexpat1 libfontconfig1 libfreetype6 libgettextpo0 libice6 libjpeg8 libkpathsea5 liblcms1 libmagic1 libmng1 libpaper-utils libpaper1 libpipeline1 libpoppler19 libpthread-stubs0 libpthread-stubs0-dev libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-help libqt4-network libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtgui4 libsm6 libtiff4 libunistring0 libx11-6 libx11-data libx11-dev libxau-dev libxau6 libxaw7 libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 libxext6 libxi6 libxml2 libxmlrpc-core-c3 libxmu6 libxpm4 libxrender1 libxt6 luatex man-db mime-support po-debconf qdbus qt4-linguist-tools qt4-qmake tex-common texlive-base texlive-binaries texlive-common texlive-doc-base texlive-fonts-recommended texlive-latex-base texlive-latex-recommended ttf-dejavu-core ucf x11-common x11proto-core-dev x11proto-input-dev x11proto-kb-dev xorg-sgml-doctools xtrans-dev 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. Need to get 80.3 MB of archives. After this operation, 229 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libexpat1 libpipeline1 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libxext6 libxml2 libarchive1 x11-common libice6 libsm6 libxt6 libaudio2 libcroco3 libcurl3 libfreetype6 ucf ttf-dejavu-core fontconfig-config libfontconfig1 libunistring0 libgettextpo0 libjpeg8 liblcms1 libmng1 libqtcore4 libqt4-xml qdbus libqt4-dbus libqt4-network libqt4-script libqt4-sql libqt4-xmlpatterns fontconfig libtiff4 libxi6 libxrender1 libqtgui4 libqt4-declarative libqt4-designer libqt4-help libqt4-qt3support libqt4-scripttools libqt4-svg libqt4-test libxmu6 libxpm4 libxaw7 libmagic1 file mime-support bsdmainutils ed gettext-base groff-base man-db libxmlrpc-core-c3 emacsen-common cmake-data cmake html2text gettext intltool-debian po-debconf debhelper libkpathsea5 libpaper1 libpaper-utils libpoppler19 libpthread-stubs0 libpthread-stubs0-dev qt4-linguist-tools qt4-qmake xorg-sgml-doctools x11proto-core-dev libxau-dev libxdmcp-dev x11proto-input-dev x11proto-kb-dev xtrans-dev libxcb1-dev libx11-dev libqt4-dev luatex tex-common texlive-common texlive-doc-base texlive-binaries texlive-base texlive-fonts-recommended texlive-latex-base texlive-latex-recommended Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise/main libexpat1 amd64 2.0.1-7.2 [131 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise/main libpipeline1 amd64 1.2.0-5 [26.2 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise/main libxau6 amd64 1:1.0.6-4 [8392 B] Get:4 http://ftpmaster.internal/ubuntu/ precise/main libxdmcp6 amd64 1:1.1.0-4 [12.7 kB] Get:5 http://ftpmaster.internal/ubuntu/ precise/main libxcb1 amd64 1.7-4 [40.9 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise/main libx11-data amd64 2:1.4.4-4 [172 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise/main libx11-6 amd64 2:1.4.4-4 [766 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise/main libxext6 amd64 2:1.3.0-3 [34.7 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise/main libxml2 amd64 2.7.8.dfsg-5ubuntu1 [673 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise/main libarchive1 amd64 2.8.5-3ubuntu1 [117 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise/main x11-common amd64 1:7.6+7ubuntu7 [56.6 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise/main libice6 amd64 2:1.0.7-2 [46.2 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise/main libsm6 amd64 2:1.2.0-2 [18.1 kB] Get:14 http://ftpmaster.internal/ubuntu/ precise/main libxt6 amd64 1:1.1.1-2 [185 kB] Get:15 http://ftpmaster.internal/ubuntu/ precise/main libaudio2 amd64 1.9.3-1 [58.2 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise/main libcroco3 amd64 0.6.2-2 [100 kB] Get:17 http://ftpmaster.internal/ubuntu/ precise/main libcurl3 amd64 7.22.0-3ubuntu1 [235 kB] Get:18 http://ftpmaster.internal/ubuntu/ precise/main libfreetype6 amd64 2.4.8-1 [342 kB] Get:19 http://ftpmaster.internal/ubuntu/ precise/main ucf all 3.0025+nmu2ubuntu1 [54.4 kB] Get:20 http://ftpmaster.internal/ubuntu/ precise/main ttf-dejavu-core amd64 2.33-2 [1550 kB] Get:21 http://ftpmaster.internal/ubuntu/ precise/main fontconfig-config amd64 2.8.0-3ubuntu2 [44.5 kB] Get:22 http://ftpmaster.internal/ubuntu/ precise/main libfontconfig1 amd64 2.8.0-3ubuntu2 [124 kB] Get:23 http://ftpmaster.internal/ubuntu/ precise/main libunistring0 amd64 0.9.3-5 [427 kB] Get:24 http://ftpmaster.internal/ubuntu/ precise/main libgettextpo0 amd64 0.18.1.1-5ubuntu3 [120 kB] Get:25 http://ftpmaster.internal/ubuntu/ precise/main libjpeg8 amd64 8c-2ubuntu4 [123 kB] Get:26 http://ftpmaster.internal/ubuntu/ precise/main liblcms1 amd64 1.19.dfsg-1ubuntu3 [106 kB] Get:27 http://ftpmaster.internal/ubuntu/ precise/main libmng1 amd64 1.0.10-3 [215 kB] Get:28 http://ftpmaster.internal/ubuntu/ precise/main libqtcore4 amd64 4:4.7.4-1ubuntu6 [1898 kB] Get:29 http://ftpmaster.internal/ubuntu/ precise/main libqt4-xml amd64 4:4.7.4-1ubuntu6 [91.7 kB] Get:30 http://ftpmaster.internal/ubuntu/ precise/main qdbus amd64 4:4.7.4-1ubuntu6 [27.7 kB] Get:31 http://ftpmaster.internal/ubuntu/ precise/main libqt4-dbus amd64 4:4.7.4-1ubuntu6 [170 kB] Get:32 http://ftpmaster.internal/ubuntu/ precise/main libqt4-network amd64 4:4.7.4-1ubuntu6 [518 kB] Get:33 http://ftpmaster.internal/ubuntu/ precise/main libqt4-script amd64 4:4.7.4-1ubuntu6 [758 kB] Get:34 http://ftpmaster.internal/ubuntu/ precise/main libqt4-sql amd64 4:4.7.4-1ubuntu6 [95.6 kB] Get:35 http://ftpmaster.internal/ubuntu/ precise/main libqt4-xmlpatterns amd64 4:4.7.4-1ubuntu6 [1033 kB] Get:36 http://ftpmaster.internal/ubuntu/ precise/main fontconfig amd64 2.8.0-3ubuntu2 [157 kB] Get:37 http://ftpmaster.internal/ubuntu/ precise/main libtiff4 amd64 3.9.5-2 [144 kB] Get:38 http://ftpmaster.internal/ubuntu/ precise/main libxi6 amd64 2:1.4.3-3ubuntu1 [30.6 kB] Get:39 http://ftpmaster.internal/ubuntu/ precise/main libxrender1 amd64 1:0.9.6-2 [20.8 kB] Get:40 http://ftpmaster.internal/ubuntu/ precise/main libqtgui4 amd64 4:4.7.4-1ubuntu6 [3930 kB] Get:41 http://ftpmaster.internal/ubuntu/ precise/main libqt4-declarative amd64 4:4.7.4-1ubuntu6 [998 kB] Get:42 http://ftpmaster.internal/ubuntu/ precise/main libqt4-designer amd64 4:4.7.4-1ubuntu6 [3648 kB] Get:43 http://ftpmaster.internal/ubuntu/ precise/main libqt4-help amd64 4:4.7.4-1ubuntu6 [197 kB] Get:44 http://ftpmaster.internal/ubuntu/ precise/main libqt4-qt3support amd64 4:4.7.4-1ubuntu6 [1018 kB] Get:45 http://ftpmaster.internal/ubuntu/ precise/main libqt4-scripttools amd64 4:4.7.4-1ubuntu6 [219 kB] Get:46 http://ftpmaster.internal/ubuntu/ precise/main libqt4-svg amd64 4:4.7.4-1ubuntu6 [136 kB] Get:47 http://ftpmaster.internal/ubuntu/ precise/main libqt4-test amd64 4:4.7.4-1ubuntu6 [58.0 kB] Get:48 http://ftpmaster.internal/ubuntu/ precise/main libxmu6 amd64 2:1.1.0-3 [52.7 kB] Get:49 http://ftpmaster.internal/ubuntu/ precise/main libxpm4 amd64 1:3.5.9-4 [37.0 kB] Get:50 http://ftpmaster.internal/ubuntu/ precise/main libxaw7 amd64 2:1.0.9-3 [201 kB] Get:51 http://ftpmaster.internal/ubuntu/ precise/main libmagic1 amd64 5.09-2 [217 kB] Get:52 http://ftpmaster.internal/ubuntu/ precise/main file amd64 5.09-2 [19.7 kB] Get:53 http://ftpmaster.internal/ubuntu/ precise/main mime-support all 3.51-1ubuntu1 [30.7 kB] Get:54 http://ftpmaster.internal/ubuntu/ precise/main bsdmainutils amd64 8.2.3 [198 kB] Get:55 http://ftpmaster.internal/ubuntu/ precise/main ed amd64 1.5-3 [57.9 kB] Get:56 http://ftpmaster.internal/ubuntu/ precise/main gettext-base amd64 0.18.1.1-5ubuntu3 [80.0 kB] Get:57 http://ftpmaster.internal/ubuntu/ precise/main groff-base amd64 1.21-6 [1047 kB] Get:58 http://ftpmaster.internal/ubuntu/ precise/main man-db amd64 2.6.0.2-3 [727 kB] Get:59 http://ftpmaster.internal/ubuntu/ precise/main libxmlrpc-core-c3 amd64 1.16.33-3.1ubuntu5 [178 kB] Get:60 http://ftpmaster.internal/ubuntu/ precise/main emacsen-common all 1.4.22ubuntu1 [16.9 kB] Get:61 http://ftpmaster.internal/ubuntu/ precise/main cmake-data all 2.8.6-0ubuntu1 [699 kB] Get:62 http://ftpmaster.internal/ubuntu/ precise/main cmake amd64 2.8.6-0ubuntu1 [4276 kB] Get:63 http://ftpmaster.internal/ubuntu/ precise/main html2text amd64 1.3.2a-15 [104 kB] Get:64 http://ftpmaster.internal/ubuntu/ precise/main gettext amd64 0.18.1.1-5ubuntu3 [1188 kB] Get:65 http://ftpmaster.internal/ubuntu/ precise/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:66 http://ftpmaster.internal/ubuntu/ precise/main po-debconf amd64 1.0.16+nmu1ubuntu1 [211 kB] Get:67 http://ftpmaster.internal/ubuntu/ precise/main debhelper amd64 8.9.9ubuntu1 [477 kB] Get:68 http://ftpmaster.internal/ubuntu/ precise/main libkpathsea5 amd64 2009-11ubuntu2 [56.7 kB] Get:69 http://ftpmaster.internal/ubuntu/ precise/main libpaper1 amd64 1.1.24+nmu1 [14.0 kB] Get:70 http://ftpmaster.internal/ubuntu/ precise/main libpaper-utils amd64 1.1.24+nmu1 [9044 B] Get:71 http://ftpmaster.internal/ubuntu/ precise/main libpoppler19 amd64 0.18.2-0ubuntu2 [781 kB] Get:72 http://ftpmaster.internal/ubuntu/ precise/main libpthread-stubs0 amd64 0.3-2.1ubuntu1 [3358 B] Get:73 http://ftpmaster.internal/ubuntu/ precise/main libpthread-stubs0-dev amd64 0.3-2.1ubuntu1 [2482 B] Get:74 http://ftpmaster.internal/ubuntu/ precise/main qt4-linguist-tools amd64 4:4.7.4-1ubuntu6 [834 kB] Get:75 http://ftpmaster.internal/ubuntu/ precise/main qt4-qmake amd64 4:4.7.4-1ubuntu6 [1224 kB] Get:76 http://ftpmaster.internal/ubuntu/ precise/main xorg-sgml-doctools amd64 1:1.8-2 [10.9 kB] Get:77 http://ftpmaster.internal/ubuntu/ precise/main x11proto-core-dev amd64 7.0.22-1 [299 kB] Get:78 http://ftpmaster.internal/ubuntu/ precise/main libxau-dev amd64 1:1.0.6-4 [10.5 kB] Get:79 http://ftpmaster.internal/ubuntu/ precise/main libxdmcp-dev amd64 1:1.1.0-4 [26.9 kB] Get:80 http://ftpmaster.internal/ubuntu/ precise/main x11proto-input-dev amd64 2.0.2-2ubuntu1 [69.0 kB] Get:81 http://ftpmaster.internal/ubuntu/ precise/main x11proto-kb-dev amd64 1.0.5-2 [27.6 kB] Get:82 http://ftpmaster.internal/ubuntu/ precise/main xtrans-dev amd64 1.2.6-2 [82.9 kB] Get:83 http://ftpmaster.internal/ubuntu/ precise/main libxcb1-dev amd64 1.7-4 [78.0 kB] Get:84 http://ftpmaster.internal/ubuntu/ precise/main libx11-dev amd64 2:1.4.4-4 [912 kB] Get:85 http://ftpmaster.internal/ubuntu/ precise/main libqt4-dev amd64 4:4.7.4-1ubuntu6 [2358 kB] Get:86 http://ftpmaster.internal/ubuntu/ precise/main luatex amd64 0.70.1-1ubuntu1 [2458 kB] Get:87 http://ftpmaster.internal/ubuntu/ precise/main tex-common all 2.10 [709 kB] Get:88 http://ftpmaster.internal/ubuntu/ precise/main texlive-common all 2009-15 [94.4 kB] Get:89 http://ftpmaster.internal/ubuntu/ precise/main texlive-doc-base all 2009-2 [1339 kB] Get:90 http://ftpmaster.internal/ubuntu/ precise/main texlive-binaries amd64 2009-11ubuntu2 [8054 kB] Get:91 http://ftpmaster.internal/ubuntu/ precise/main texlive-base all 2009-15 [14.7 MB] Get:92 http://ftpmaster.internal/ubuntu/ precise/main texlive-fonts-recommended all 2009-15 [7247 kB] Get:93 http://ftpmaster.internal/ubuntu/ precise/main texlive-latex-base all 2009-15 [1406 kB] Get:94 http://ftpmaster.internal/ubuntu/ precise/main texlive-latex-recommended all 2009-15 [6752 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 80.3 MB in 3s (23.2 MB/s) 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Selecting previously unselected package texlive-latex-base. Unpacking texlive-latex-base (from .../texlive-latex-base_2009-15_all.deb) ... Selecting previously unselected package texlive-latex-recommended. Unpacking texlive-latex-recommended (from .../texlive-latex-recommended_2009-15_all.deb) ... Setting up libexpat1 (2.0.1-7.2) ... Setting up libpipeline1 (1.2.0-5) ... Setting up libxau6 (1:1.0.6-4) ... Setting up libxdmcp6 (1:1.1.0-4) ... Setting up libxcb1 (1.7-4) ... Setting up libx11-data (2:1.4.4-4) ... Setting up libx11-6 (2:1.4.4-4) ... Setting up libxext6 (2:1.3.0-3) ... Setting up libxml2 (2.7.8.dfsg-5ubuntu1) ... Setting up libarchive1 (2.8.5-3ubuntu1) ... Setting up x11-common (1:7.6+7ubuntu7) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6 (2:1.0.7-2) ... Setting up libsm6 (2:1.2.0-2) ... Setting up libxt6 (1:1.1.1-2) ... Setting up libaudio2 (1.9.3-1) ... Setting up libcroco3 (0.6.2-2) ... Setting up libcurl3 (7.22.0-3ubuntu1) ... 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Setting up file (5.09-2) ... Setting up mime-support (3.51-1ubuntu1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode. Setting up bsdmainutils (8.2.3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up ed (1.5-3) ... Setting up gettext-base (0.18.1.1-5ubuntu3) ... Setting up groff-base (1.21-6) ... Setting up man-db (2.6.0.2-3) ... Building database of manual pages ... Setting up libxmlrpc-core-c3 (1.16.33-3.1ubuntu5) ... Setting up emacsen-common (1.4.22ubuntu1) ... emacsen-common: Handling install of emacsen flavor emacs Setting up cmake-data (2.8.6-0ubuntu1) ... emacsen-common: Handling install of emacsen flavor emacs Setting up cmake (2.8.6-0ubuntu1) ... Setting up html2text (1.3.2a-15) ... Setting up gettext (0.18.1.1-5ubuntu3) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu1ubuntu1) ... Setting up debhelper (8.9.9ubuntu1) ... Setting up libkpathsea5 (2009-11ubuntu2) ... Setting up libpaper1 (1.1.24+nmu1) ... Creating config file /etc/papersize with new version Setting up libpaper-utils (1.1.24+nmu1) ... Setting up libpoppler19 (0.18.2-0ubuntu2) ... Setting up libpthread-stubs0 (0.3-2.1ubuntu1) ... Setting up libpthread-stubs0-dev (0.3-2.1ubuntu1) ... Setting up qt4-linguist-tools (4:4.7.4-1ubuntu6) ... update-alternatives: using /usr/bin/lupdate-qt4 to provide /usr/bin/lupdate (lupdate) in auto mode. update-alternatives: using /usr/bin/lrelease-qt4 to provide /usr/bin/lrelease (lrelease) in auto mode. Setting up qt4-qmake (4:4.7.4-1ubuntu6) ... update-alternatives: using /usr/bin/qmake-qt4 to provide /usr/bin/qmake (qmake) in auto mode. Setting up xorg-sgml-doctools (1:1.8-2) ... Setting up x11proto-core-dev (7.0.22-1) ... Setting up libxau-dev (1:1.0.6-4) ... Setting up libxdmcp-dev (1:1.1.0-4) ... Setting up x11proto-input-dev (2.0.2-2ubuntu1) ... Setting up x11proto-kb-dev (1.0.5-2) ... Setting up xtrans-dev (1.2.6-2) ... Setting up libxcb1-dev (1.7-4) ... Setting up libx11-dev (2:1.4.4-4) ... Setting up luatex (0.70.1-1ubuntu1) ... texlive-base is not ready, cannot create formats Setting up tex-common (2.10) ... Creating config file /etc/texmf/texmf.d/05TeXMF.cnf with new version Creating config file /etc/texmf/texmf.d/15Plain.cnf with new version Creating config file /etc/texmf/texmf.d/45TeXinputs.cnf with new version Creating config file /etc/texmf/texmf.d/55Fonts.cnf with new version Creating config file /etc/texmf/texmf.d/65BibTeX.cnf with new version Creating config file /etc/texmf/texmf.d/75DviPS.cnf with new version Creating config file /etc/texmf/texmf.d/80DVIPDFMx.cnf with new version Creating config file /etc/texmf/texmf.d/85Misc.cnf with new version Creating config file /etc/texmf/texmf.d/90TeXDoc.cnf with new version Creating config file /etc/texmf/texmf.d/95NonPath.cnf with new version Creating config file /etc/texmf/updmap.d/00updmap.cfg with new version Creating config file /etc/texmf/texmf.cnf with new version Running mktexlsr. This may take some time... done. texlive-base is not ready, delaying updmap-sys call texlive-base is not ready, skipping fmtutil-sys --all call Setting up texlive-common (2009-15) ... Setting up texlive-doc-base (2009-2) ... Setting up texlive-binaries (2009-11ubuntu2) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode. update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode. Building format(s) --refresh. This may take some time... done. Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Setting up texlive-base (2009-15) ... Creating config file /etc/texmf/dvips/config/config.ps with new version Creating config file /etc/texmf/tex/generic/config/pdftexconfig.tex with new version Creating config file /etc/texmf/dvipdfmx/dvipdfmx.cfg with new version Creating config file /etc/texmf/xdvi/XDvi with new version Running mktexlsr. This may take some time... done. Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-base.cnf. This may take some time... done. Processing triggers for tex-common ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building e-tex based formats --byhyphen /var/lib/texmf/tex/generic/config/language.def. This may take some time... done. Setting up texlive-fonts-recommended (2009-15) ... Setting up texlive-latex-base (2009-15) ... Running mktexlsr. This may take some time... done. Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-latex-base.cnf. This may take some time... done. Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up texlive-latex-recommended (2009-15) ... Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Setting up qdbus (4:4.7.4-1ubuntu6) ... Setting up libqtgui4 (4:4.7.4-1ubuntu6) ... Setting up libqt4-svg (4:4.7.4-1ubuntu6) ... Setting up libqt4-dbus (4:4.7.4-1ubuntu6) ... Setting up libqt4-network (4:4.7.4-1ubuntu6) ... Setting up libqt4-script (4:4.7.4-1ubuntu6) ... Setting up libqt4-xmlpatterns (4:4.7.4-1ubuntu6) ... Setting up libqt4-declarative (4:4.7.4-1ubuntu6) ... Setting up libqt4-designer (4:4.7.4-1ubuntu6) ... Setting up libqt4-help (4:4.7.4-1ubuntu6) ... Setting up libqt4-qt3support (4:4.7.4-1ubuntu6) ... Setting up libqt4-scripttools (4:4.7.4-1ubuntu6) ... Setting up libqt4-dev (4:4.7.4-1ubuntu6) ... update-alternatives: using /usr/bin/moc-qt4 to provide /usr/bin/moc (moc) in auto mode. update-alternatives: using /usr/bin/uic-qt4 to provide /usr/bin/uic (uic) in auto mode. update-alternatives: warning: skip creation of /usr/share/man/man1/uic.1.gz because associated file /usr/share/man/man1/uic-qt4.1.gz (of link group uic) doesn't exist. Processing triggers for libc-bin ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.13-20ubuntu10 make_3.81-8.1ubuntu1 dpkg-dev_1.16.1.2ubuntu3 gcc-4.6_4.6.2-7ubuntu1 g++-4.6_4.6.2-7ubuntu1 binutils_2.22-2ubuntu1 libstdc++6-4.6-dev_4.6.2-7ubuntu1 libstdc++6_4.6.2-7ubuntu1 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Thu Nov 24 21:15:12 2011 UTC using DSA key ID C78F687C gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./massxpert_3.2.0-2.dsc dpkg-source: info: extracting massxpert in massxpert-3.2.0 dpkg-source: info: unpacking massxpert_3.2.0.orig.tar.gz dpkg-source: info: unpacking massxpert_3.2.0-2.debian.tar.gz dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): -D_FORTIFY_SOURCE=2 dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): -Wl,-Bsymbolic-functions -Wl,-z,relro dpkg-buildpackage: source package massxpert dpkg-buildpackage: source version 3.2.0-2 dpkg-source --before-build massxpert-3.2.0 dpkg-buildpackage: host architecture amd64 /usr/bin/fakeroot debian/rules clean "---------------------------------------" NUMJOBS: 2 MAKEFLAGS: -j2 DEB_BUILD_OPTIONS: parallel=2 "---------------------------------------" dh_testdir dh_testroot dh_clean rm -f debian/massxpert.substvars rm -f debian/massxpert.*.debhelper rm -rf debian/massxpert/ rm -f debian/massxpert-dbg.substvars rm -f debian/massxpert-dbg.*.debhelper rm -rf debian/massxpert-dbg/ rm -f debian/massxpert-data.substvars rm -f debian/massxpert-data.*.debhelper rm -rf debian/massxpert-data/ rm -f debian/massxpert-doc.substvars rm -f debian/massxpert-doc.*.debhelper rm -rf debian/massxpert-doc/ rm -f debian/*.debhelper.log rm -f debian/files find . \( \( -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} \; \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \) rm -f *-stamp rm -rf /build/buildd/massxpert-3.2.0/debian/build-indep rm -rf /build/buildd/massxpert-3.2.0/debian/build-arch rm -rf /build/buildd/massxpert-3.2.0/debian/tmp-indep /build/buildd/massxpert-3.2.0/debian/tmp-arch debian/rules build "---------------------------------------" NUMJOBS: 2 MAKEFLAGS: -j2 DEB_BUILD_OPTIONS: parallel=2 "---------------------------------------" dh_testdir dh_prep -i rm -f debian/massxpert-data.substvars rm -f debian/massxpert-data.*.debhelper rm -rf debian/massxpert-data/ rm -f debian/massxpert-doc.substvars rm -f debian/massxpert-doc.*.debhelper rm -rf debian/massxpert-doc/ rm -rf /build/buildd/massxpert-3.2.0/debian/tmp-indep mkdir -p /build/buildd/massxpert-3.2.0/debian/build-indep cd /build/buildd/massxpert-3.2.0/debian/build-indep && \ /usr/bin/cmake \ -D BUILD_PROGRAM=0 \ -D BUILD_DATA=1 \ -D BUILD_USERMANUAL=1 \ -D CMAKE_INSTALL_PREFIX=/usr ../.. -- The C compiler identification is GNU -- The CXX compiler identification is GNU -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done ~~~~~~~~~~~~~~~~~~~~~~~~ SUMMARY ~~~~~~~~~~~~~~~~~~~~~~~~ -- BUILD_PROGRAM:0 -- BUILD_DATA:1 -- BUILD_USERMANUAL:1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -- TARGET: massxpert--VERSION: 3.2.0 -- CMAKE_INSTALL_PREFIX: /usr -- MASSXPERT_BIN_DIR: /usr/bin -- MASSXPERT_DATA_DIR: /usr/share/massxpert -- MASSXPERT_PLUGIN_DIR: /usr/lib/massxpert/plugins -- MASSXPERT_LOCALE_DIR: /usr/share/massxpert/locales -- MASSXPERT_DOC_DIR: /usr/share/doc/massxpert -- MASSXPERT_USERMAN_DIR: /usr/share/doc/massxpert/usermanual ~~~~~~~~~~~~~~~~~~~~~~~~ SUMMARY ~~~~~~~~~~~~~~~~~~~~~~~~ -- Configuring done -- Generating done -- Build files have been written to: /build/buildd/massxpert-3.2.0/debian/build-indep # No more this way, as we now use CMake with UseLATEX.cmake # cd /build/buildd/massxpert-3.2.0/usermanual && /usr/bin/make -f Makefile all_no_reload /usr/bin/make -C /build/buildd/massxpert-3.2.0/debian/build-indep make[1]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-indep' /usr/bin/cmake -H/build/buildd/massxpert-3.2.0 -B/build/buildd/massxpert-3.2.0/debian/build-indep --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-indep' /usr/bin/make -f usermanual/CMakeFiles/pdf.dir/build.make usermanual/CMakeFiles/pdf.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-indep' cd /build/buildd/massxpert-3.2.0/debian/build-indep && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.0 /build/buildd/massxpert-3.2.0/usermanual /build/buildd/massxpert-3.2.0/debian/build-indep /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/CMakeFiles/pdf.dir/DependInfo.cmake --color= Scanning dependencies of target pdf make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-indep' /usr/bin/make -f usermanual/CMakeFiles/pdf.dir/build.make usermanual/CMakeFiles/pdf.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-indep' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] [ 0%] Generating figures/addresses.png Generating index.tex cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/addresses.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/addresses.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/index.tex /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/index.tex /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] [ 0%] Generating figures/isotopic-pattern-calculator.png Generating figures/dna-fragmentation.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/isotopic-pattern-calculator.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/isotopic-pattern-calculator.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/dna-fragmentation.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/dna-fragmentation.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] [ 0%] 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/build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertdef-crosslinkers.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertdef-crosslinkers.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] [ 0%] Generating figures/xpertdef-fragmentations-frag-rules.png Generating figures/xpertdef-fragmentations-simplest.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertdef-fragmentations-frag-rules.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertdef-fragmentations-frag-rules.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertdef-fragmentations-simplest.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertdef-fragmentations-simplest.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] [ 0%] Generating figures/xpertdef-fragmentations-special-dna-a-base-case.png Generating figures/xpertdef-modifications.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertdef-fragmentations-special-dna-a-base-case.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertdef-fragmentations-special-dna-a-base-case.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertdef-modifications.png 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/build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-file-menu.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-empty-sequence-editor.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-empty-sequence-editor.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] [ 0%] Generating figures/xpertedit-filtering-oligomer-data.png Generating figures/xpertedit-find-sequence-dlg.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-filtering-oligomer-data.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-filtering-oligomer-data.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-find-sequence-dlg.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-find-sequence-dlg.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles Generating figures/xpertedit-fragmentation-cross-linked-oligomer.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-fragmentation-cross-linked-oligomer.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-fragmentation-cross-linked-oligomer.png [ 0%] Generating figures/xpertedit-fragmentation.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-fragmentation.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-fragmentation.png [ 0%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] Generating figures/xpertedit-mass-search.png Generating figures/xpertedit-modify-monomer-manually-defined-modif.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-modify-monomer-manually-defined-modif.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-modify-monomer-manually-defined-modif.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-mass-search.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-mass-search.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] Generating figures/xpertedit-modify-monomer.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-modify-monomer.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-modify-monomer.png [ 0%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] Generating figures/xpertedit-mz-ratio-calculator.png Generating figures/xpertedit-modify-polymer.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-mz-ratio-calculator.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-mz-ratio-calculator.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-modify-polymer.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-modify-polymer.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] [ 0%] Generating figures/xpertedit-net-charge-pka-ph-pi.png Generating figures/xpertedit-pi-pka-ph-pi.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-net-charge-pka-ph-pi.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-net-charge-pka-ph-pi.png cd 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/build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-protein-main-view.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-protein-main-view.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] Generating figures/xpertedit-select-sample-sequence.png Generating figures/xpertedit-sequence-editor-bad-char.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-select-sample-sequence.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-select-sample-sequence.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-sequence-editor-bad-char.png 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/build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-spectrum-creation-from-cleavages.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] Generating figures/xpertedit-spectrum-simulation-cleavage-oligomers.png Generating figures/xpertminer-empty-input-mz-list.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertedit-spectrum-simulation-cleavage-oligomers.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertedit-spectrum-simulation-cleavage-oligomers.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertminer-empty-input-mz-list.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertminer-empty-input-mz-list.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] Generating figures/xpertminer-filled-input-mz-list.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertminer-filled-input-mz-list.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertminer-filled-input-mz-list.png Generating figures/xpertminer-mz-lab-wnd-experimental-feature.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertminer-mz-lab-wnd-experimental-feature.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertminer-mz-lab-wnd-experimental-feature.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] [ 0%] Generating figures/xpertminer-mz-only-filled-input-mz-list.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertminer-mz-only-filled-input-mz-list.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertminer-mz-only-filled-input-mz-list.png Generating figures/xpertminer-mz-z-filled-input-mz-list.png cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertminer-mz-z-filled-input-mz-list.png 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/build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/massxpert.tex cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/figures/xpertminer-mzlab-wnd.png /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/figures/xpertminer-mzlab-wnd.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] Generating massxpert-macros.tex cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/massxpert-macros.tex /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/massxpert-macros.tex Generating titlepage.tex cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/titlepage.tex 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Generating preface.tex cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/preface.tex /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/preface.tex Generating installation.tex cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/installation.tex /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/installation.tex /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] Generating basics-polchem.tex cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/basics-polchem.tex /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/basics-polchem.tex Generating basics-massspec.tex cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/basics-massspec.tex /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/basics-massspec.tex /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles [ 0%] [ 0%] Generating generalities.tex Generating xpertdef.tex cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/generalities.tex /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/generalities.tex cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/xpertdef.tex /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/xpertdef.tex /usr/bin/cmake -E cmake_progress_report 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GNU-GPL-3.0.tex cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.0/usermanual/GNU-GPL-3.0.tex /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual/GNU-GPL-3.0.tex cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E chdir /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual /usr/bin/pdflatex -interaction=nonstopmode massxpert.tex This is pdfTeX, Version 3.1415926-1.40.10 (TeX Live 2009/Debian) entering extended mode (./massxpert.tex LaTeX2e <2009/09/24> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. 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Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # between the codes of each monomer and their graphic file (p ixmap[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] [121] [122 <./figures/pol-chem-defs-directory-protein-and-saccharide.png (PNG c opy)>] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # This is the modification_dictionary file where the correspo ndences[] Overfull \hbox (21.79932pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # between the name of each modification and their graphic fil e (pixmap[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # sequence editor are made. Also, the graphical operation tha t is to[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # be performed upon chemical modification of a monomer is lis ted ('T'[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # for transparent and 'O' for opaque). See the manual for det ails.[] [123] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # where Phosphorylation is the name of the modification. T in dicates[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # process (O indicates that the visual rendering of the modif ication[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] Overfull \hbox (82.5854pt too wide) in paragraph at lines 272--283 \T1/aer/m/n/10 listed in the file for the mod-i-fi-ca-tion. 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(./protein-1-letter.xml.tex Overfull \hbox (12.51198pt too wide) in paragraph at lines 2--2 []\T1/aer/m/sc/20.74 The Pro-tein Chem-istry Def-i-ni-tion Overfull \hbox (11.31934pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (278.55884pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] [127] Overfull \hbox (37.51929pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] Overfull \hbox (89.91919pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154]) [155] (./leu-enkephalin.mxp.tex Overfull \hbox (11.31934pt too wide) in paragraph at lines 52--52 []\T1/aett/m/n/10 Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (168.51904pt too wide) in paragraph at lines 52--52 []\T1/aett/m/n/10 [] ) [156] (./pka_ph_pi.xml.tex Overfull \hbox (11.31934pt too wide) in paragraph at lines 526--526 []\T1/aett/m/n/10 Copyright 2003 2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 526--526 []\T1/aett/m/n/10 [] Underfull \vbox (badness 10000) has occurred while \output is active [157] [158] [159] [160] [161] [162] [163] [164] [165] [166]) [167] (./GNU-GPL-3.0.tex Overfull \hbox (17.38269pt too wide) in paragraph at lines 2--2 []\T1/aer/m/sc/20.74 GNU Gen-eral Pub-lic Li-cense Text [168] [169] [170] [171] [172] [173] [174] [175] Overfull \hbox (1.69012pt too wide) in paragraph at lines 512--516 []\T1/aer/m/n/10 Each con-trib-u-tor grants you a non-exclusive, world-wide, ro yalty-free patent [176] [177] Overfull \hbox (6.92036pt too wide) in paragraph at lines 616--625 \T1/aer/m/n/10 STATED IN WRIT-ING THE COPY-RIGHT HOLD-ERS AND/OR OTHER Overfull \hbox (2.58072pt too wide) in paragraph at lines 616--625 \T1/aer/m/n/10 PAR-TIES PRO-VIDE THE PRO-GRAM ``AS IS'' WITH-OUT WAR-RANTY Overfull \hbox (18.23813pt too wide) in paragraph at lines 628--638 []\T1/aer/m/n/10 IN NO EVENT UN-LESS RE-QUIRED BY AP-PLI-CA-BLE LAW OR AGREED Overfull \hbox (5.53944pt too wide) in paragraph at lines 628--638 \T1/aer/m/n/10 TO IN WRIT-ING WILL ANY COPY-RIGHT HOLDER, OR ANY OTHER Overfull \hbox (9.5637pt too wide) in paragraph at lines 628--638 \T1/aer/m/n/10 CLUD-ING ANY GEN-ERAL, SPE-CIAL, IN-CI-DEN-TAL OR CON-SE-QUEN- [178] Overfull \hbox (35.02808pt too wide) in paragraph at lines 679--682 \T1/aer/m/n/10 cense along with this pro-gram. If not, see http://www.gnu.org/l icenses/. ) [179] [180]) (./index.tex No file massxpert.ind. ) (./massxpert.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information)pdfTeX warning (dest): name {??} has been referenced but does not exist, replaced by a fixed one Output written on massxpert.pdf (194 pages, 10616801 bytes). Transcript written on massxpert.log. cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E chdir /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual /usr/bin/pdflatex -interaction=nonstopmode massxpert.tex This is pdfTeX, Version 3.1415926-1.40.10 (TeX Live 2009/Debian) entering extended mode (./massxpert.tex LaTeX2e <2009/09/24> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. 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Overfull \hbox (8.38528pt too wide) in paragraph at lines 38--42 \T1/aer/m/n/10 fully pro-grammable (that's the \T1/aer/m/sl/10 Xpert-Calc \T1/a er/m/n/10 mod-ule also part of the \T1/aer/m/sl/10 massXpert [1] [2] Overfull \hbox (10.50308pt too wide) in paragraph at lines 168--168 [][]\T1/aer/m/sc/20.74 Program Avail-abil-ity, Tech-ni-cal- [3] Underfull \hbox (badness 10000) in paragraph at lines 196--201 Overfull \hbox (4.74527pt too wide) in paragraph at lines 212--214 []\T1/aer/m/n/10 The \T1/aer/m/sl/10 Xpert-Def \T1/aer/m/n/10 mod-ule (def-i-ni -tion of atoms and of new poly-mer chemistries); [4] [5] Overfull \hbox (19.99072pt too wide) in paragraph at lines 266--270 []\T1/aer/m/n/10 The gen-eral pol-icy for di-rect-ing ques-tions, com-ments, fe a-ture re-quests, \T1/aer/m/sl/10 massXpert Overfull \hbox (6.16531pt too wide) in paragraph at lines 266--270 \T1/aer/m/n/10 pro-gram and/or \T1/aer/m/sl/10 massXpert \T1/aer/m/n/10 doc-u-m en-ta-tion bug re-ports[] should be self-explanatory Underfull \hbox (badness 10000) in paragraph at lines 275--277 [6 <./figures/addresses.png>]) (./installation.tex Chapter 2. Underfull \hbox (badness 10000) in paragraph at lines 5--8 [7] Underfull \hbox (badness 10000) in paragraph at lines 86--88 [8] Overfull \hbox (9.62535pt too wide) in paragraph at lines 194--199 \T1/aer/m/n/10 At this point the soft-ware should have in-stalled in the des-ti -na-tion tree (\T1/aett/m/n/10 /usr/local [9] [10] Underfull \hbox (badness 1406) in paragraph at lines 347--347 []\T1/aer/m/n/10 Figure 2.1: []\T1/aer/bx/sl/10 massXpert \T1/aer/bx/n/10 con-f ig-u-ra-tion set-tings. \T1/aer/m/n/10 Upon run-ning the Underfull \hbox (badness 10000) in paragraph at lines 351--362 [11] [12 <./figures/massxpert-configuration-settings-dlg.png>] [13] [14]) (./basics-polchem.tex Chapter 3. Overfull \hbox (1.969pt too wide) in paragraph at lines 13--13 [][]\T1/aer/m/sc/20.74 Polymers? Where? Ev-ery-where![] Overfull \hbox (7.65761pt too wide) in paragraph at lines 26--31 \T1/aer/m/it/10 molecules which are them-selves made from com-bi-na-tions of sm all sim-ple molecules\T1/aer/m/n/10 . [15] Underfull \vbox (badness 6876) has occurred while \output is active [16] [17 <./figures/peptbond-formation.png (PNG copy)>] [18 <./figures/prot-polymer.png (PNG copy)>] [19 <./figures/nucacbond-formation.png (PNG cop y)>] [20 <./figures/nucac-polymer.png (PNG copy)>] [21 <./figures/sacchbond-formation.png (PNG cop y)> <./figures/sacch-polymer.png (PNG copy)>] [22] [23] [24 <./figures/prot-cleavage.png (PNG copy )>] [25] [26] [27 <./figures/prot-fragmentation.png (PNG copy)>] Overfull \hbox (1.18713pt too wide) in paragraph at lines 735--736 \T1/aer/bx/it/10 b \T1/aer/bx/n/10 frag-ment se-ries[] \T1/aer/m/n/10 Sim-i-la rly, the mass cal-cu-la-tion is math-e-mat-i-cally ex-pressed [28] Overfull \hbox (9.24484pt too wide) in paragraph at lines 761--772 \T1/aer/m/n/10 sense that they do not hold nei-ther of the two pre-cur-sor poly -mer's ends. \T1/aer/m/sl/10 massXpert [29] [30 <./figures/dna-fragmentation.png ( PNG copy)>] [31] Overfull \hbox (2.33554pt too wide) in paragraph at lines 893--895 \T1/aer/m/n/10 To sum up all what we have seen so far with poly-mer chain dis-r upt-ing chemistries: Overfull \hbox (7.70595pt too wide) in paragraph at lines 914--917 []\T1/aer/m/n/10 Fragments are never ion-ized au-to-mat-i-cally; ion-iza-tion ( gain/loss of a charged [32]) (./basics-massspec.tex Chapter 4. Underfull \vbox (badness 1033) has occurred while \output is active [33] [34] [35] Underfull \hbox (badness 10000) in paragraph at lines 174--176 Underfull \hbox (badness 10000) in paragraph at lines 197--199 [36] [37] [38]) (./generalities.tex Chapter 5. [39] [40] [41] [42]) (./xpertdef.tex Chapter 6. (/usr/share/texmf-texlive/tex/latex/ae/t1aess.fd) [43] LaTeX Warning: `!h' float specifier changed to `!ht'. [44 <./figures/select-pol-chem-def.png (PNG co py)>] [45 <./figures/xpertdef-pol-chem-def.png (PNG copy)>] [46 <./figures/xper tdef-atoms.png (PNG copy)>] [47 <./figures/xpertdef-monomers.png>] Overfull \hbox (5.29686pt too wide) in paragraph at lines 297--306 \T1/aer/m/n/10 Polymer are of-ten ei-ther chem-i-cally or bio-chem-i-cally mod- i-fied. In na-ture, biopoly- [48 <./figures/xpertdef-monomers-mass- differences.png>] [49 <./figures/xpertdef-modifications.p ng (PNG copy)>] [50 <./figures/xpertdef-crosslinkers.png ( PNG copy)>] [51 <./figures/xpertdef-cleavages.png>] Overfull \hbox (0.41591pt too wide) in paragraph at lines 547--562 \T1/aer/m/n/10 cleav-age spec-i-fi-ca-tion for ``CyanogenBromide''---that the o ligomers re-sult-ing from [52] Underfull \vbox (badness 10000) has occurred while \output is active [53 <./fig ures/xpertdef-fragmentations-simplest.png>] Underfull \hbox (badness 10000) in paragraph at lines 635--639 [54] [55 <./f igures/xpertdef-fragmentations-special-dna-a-base-case.png>] [56 <./figures/xpertde f-fragmentations-frag-rules.png>] Underfull \hbox (badness 10000) in paragraph at lines 747--758 Underfull \hbox (badness 10000) in paragraph at lines 782--790 [57] [58]) (./xpertcalc.tex Chapter 7. 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Underfull \vbox (badness 10000) has occurred while \output is active [69] Overfull \hbox (0.13066pt too wide) in paragraph at lines 32--32 [][]\T1/aer/m/sl/20.74 XpertEdit \T1/aer/m/sc/20.74 Op-er-a-tion: \T1/aer/m/it/ 20.74 In Me-dias Res[] [70 <./figures/xpertedit-sel ect-sample-sequence.png (PNG copy)>] [71 <./figures/xpertedit-choose-p ol-chem-def.png (PNG copy)>] [72 <./figures/xpertedit-protein-main-view.png (PN G copy)>] [73] Overfull \hbox (20.56702pt too wide) in paragraph at lines 362--365 []\T1/aer/m/sl/10 Chemistry[] \T1/aer/m/n/10 Cal-cu-late the monomeric/element [74] [75 <./figures/xpertedit-file-m enu.png (PNG copy)> <./figures/xpertedit-chemistry-menu.png (PNG copy)>] Overfull \hbox (4.06323pt too wide) in paragraph at lines 435--436 [] [76 <./figures/xpertedit-3-letter-code-whole-process.png (PNG copy)>] [77] [78 <./figures/xp ertedit-sequence-editor-bad-char.png (PNG copy)>] [79 <./figures/xpertedit-find-seq uence-dlg.png>] Underfull \vbox (badness 1297) has occurred while \output is active [80 <./figu res/xpertedit-sequence-editor-sequence-import-errors-first.png (PNG copy)>] Underfull \hbox (badness 10000) in paragraph at lines 728--730 [81 <./figures/xpertedit-sequence-editor-sequence-import-errors-second.png (PNG copy)>] Underfull \hbox (badness 10000) in paragraph at lines 770--781 [82] [83] Underfull \vbox (badness 1584) has occurred while \output is active [84 <./figu res/xpertedit-modify-monomer.png>] Underfull \vbox (badness 10000) has occurred while \output is active [85 <./fig ures/xpertedit-modify-monomer-manually-defined-modif.png (PNG copy)>] [86 <./figures/xpertedit-modify-poly mer.png (PNG copy)>] [87 <./figures/xpertedit-cros s-link-monomers.png (PNG copy)>] [88 <./figures/xpertedit-cross-linked-mon omers.png (PNG copy)>] [89 <./figures/xpertedit-cleavages.png>] [90] [91 <./figures/xpertedit-spectrum-creation-from-cleavages.png>] [92 <./figur es/xpertedit-spectrum-simulation-cleavage-oligomers.png (PNG copy)>] [93] [94 <./figures/xpertedit-fragmentation.png (PNG copy)>] [95 <./figures/xpe rtedit-cfp-chromophore-disulfide-bond-no-account-cross-links.png pdfTeX warning: /usr/bin/pdflatex (file ./figures/xpertedit-cfp-chromophore-dis ulfide-bond-no-account-cross-links.png): large interlaced PNG might cause out o f memory (use non-interlaced PNG to fix this) >] [96 <./figures/xpertedit-cfp-chromophore-disulfide-bond-account-cross-links. png>] [97 <./figures/xpertedit-fragmentation-cross-linked-oligomer.png>] Overfull \hbox (4.71663pt too wide) in paragraph at lines 1536--1538 []\T1/aer/m/n/10 Fragments 15$\OMS/cmsy/m/n/10 $ \T1/aer/m/n/10 and 16$\OMS/cm sy/m/n/10 $ \T1/aer/m/n/10 ac-count for all the cross-links of the oligomer. [98] [99 <./figures/xpertedit-mass-sear ch.png (PNG copy)>] [100 <./figures/xpertedit-f iltering-oligomer-data.png (PNG copy)>] [101] [102 <./figures/xpertedit-mz-rat io-calculator.png (PNG copy)> <./figures/xpertedit-compositions.png (PNG copy)> ] [103] [104 <./figures/protein -monomer-acidobasic-data.png>] [105] [106] Overfull \hbox (5.1574pt too wide) in paragraph at lines 1969--1975 [][]\T1/aett/m/n/10 left_trapped \T1/aer/m/n/10 This el-e-me nt in-di-cates that the chem- Overfull \hbox (11.92708pt too wide) in paragraph at lines 1991--1999 [][]\T1/aett/m/n/10 LOST \T1/aer/m/n/10 This el-e-ment ac-tu -ally in-di-cates what should [107] [108] [109 <./figures/xpertedit-net- charge-pka-ph-pi.png (PNG copy)>] [110]) (./xpertminer.tex Chapter 9. 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[119] Overfull \hbox (14.57152pt too wide) in paragraph at lines 98--102 []\T1/aett/m/n/10 monomer_dictionary\T1/aer/m/n/10 : file es-tab-lish-ing the r e-la-tion-ship be-tween any monomer [120] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # between the codes of each monomer and their graphic file (p ixmap[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] [121] [122 <./figures/pol-chem-defs-directory-protein-and-saccharide.png (PNG c opy)>] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # This is the modification_dictionary file where the correspo ndences[] Overfull \hbox (21.79932pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # between the name of each modification and their graphic fil e (pixmap[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # sequence editor are made. Also, the graphical operation tha t is to[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # be performed upon chemical modification of a monomer is lis ted ('T'[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # for transparent and 'O' for opaque). See the manual for det ails.[] [123] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # where Phosphorylation is the name of the modification. T in dicates[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # process (O indicates that the visual rendering of the modif ication[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] Overfull \hbox (82.5854pt too wide) in paragraph at lines 272--283 \T1/aer/m/n/10 listed in the file for the mod-i-fi-ca-tion. This is vis-i-ble i n the []\T1/aett/m/n/10 AmidationGlu\%O\%glutamine.svg Overfull \hbox (13.91695pt too wide) in paragraph at lines 284--293 \T1/aer/m/n/10 the ``Phos-pho-ry-la-tion'' mod-i-fi-ca-tion (line []\T1/aett/m/ n/10 Phosphorylation%T%phospho.svg\T1/aer/m/n/10 ), [124] LaTeX Font Warning: Font shape `T1/aett/bx/n' undefined (Font) using `T1/aett/m/n' instead on input line 337. Overfull \hbox (36.91821pt too wide) in paragraph at lines 347--352 \T1/aer/m/n/10 lo-cated in the \T1/aett/m/n/10 dna \T1/aer/m/n/10 di-rec-tory, it-self lo-cated in the \T1/aett/m/n/10 /path/to/definition/directory ) (./appendices.tex [125] [126] Chapter 11. (./protein-1-letter.xml.tex Overfull \hbox (12.51198pt too wide) in paragraph at lines 2--2 []\T1/aer/m/sc/20.74 The Pro-tein Chem-istry Def-i-ni-tion Overfull \hbox (11.31934pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (278.55884pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] [127] Overfull \hbox (37.51929pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] Overfull \hbox (89.91919pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154]) [155] (./leu-enkephalin.mxp.tex Overfull \hbox (11.31934pt too wide) in paragraph at lines 52--52 []\T1/aett/m/n/10 Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (168.51904pt too wide) in paragraph at lines 52--52 []\T1/aett/m/n/10 [] ) [156] (./pka_ph_pi.xml.tex Overfull \hbox (11.31934pt too wide) in paragraph at lines 526--526 []\T1/aett/m/n/10 Copyright 2003 2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 526--526 []\T1/aett/m/n/10 [] Underfull \vbox (badness 10000) has occurred while \output is active [157] [158] [159] [160] [161] [162] [163] [164] [165] [166]) [167] (./GNU-GPL-3.0.tex Overfull \hbox (17.38269pt too wide) in paragraph at lines 2--2 []\T1/aer/m/sc/20.74 GNU Gen-eral Pub-lic Li-cense Text [168] [169] [170] [171] [172] [173] [174] [175] Overfull \hbox (1.69012pt too wide) in paragraph at lines 512--516 []\T1/aer/m/n/10 Each con-trib-u-tor grants you a non-exclusive, world-wide, ro yalty-free patent [176] [177] Overfull \hbox (6.92036pt too wide) in paragraph at lines 616--625 \T1/aer/m/n/10 STATED IN WRIT-ING THE COPY-RIGHT HOLD-ERS AND/OR OTHER Overfull \hbox (2.58072pt too wide) in paragraph at lines 616--625 \T1/aer/m/n/10 PAR-TIES PRO-VIDE THE PRO-GRAM ``AS IS'' WITH-OUT WAR-RANTY Overfull \hbox (18.23813pt too wide) in paragraph at lines 628--638 []\T1/aer/m/n/10 IN NO EVENT UN-LESS RE-QUIRED BY AP-PLI-CA-BLE LAW OR AGREED Overfull \hbox (5.53944pt too wide) in paragraph at lines 628--638 \T1/aer/m/n/10 TO IN WRIT-ING WILL ANY COPY-RIGHT HOLDER, OR ANY OTHER Overfull \hbox (9.5637pt too wide) in paragraph at lines 628--638 \T1/aer/m/n/10 CLUD-ING ANY GEN-ERAL, SPE-CIAL, IN-CI-DEN-TAL OR CON-SE-QUEN- [178] Overfull \hbox (35.02808pt too wide) in paragraph at lines 679--682 \T1/aer/m/n/10 cense along with this pro-gram. If not, see http://www.gnu.org/l icenses/. ) [179] [180]) (./index.tex No file massxpert.ind. ) (./massxpert.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information)< /usr/share/texmf-texlive/fonts/type1/public/amsfonts/cm/cmr10.pfb> Output written on massxpert.pdf (196 pages, 10694879 bytes). Transcript written on massxpert.log. cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E chdir /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual /usr/bin/makeindex massxpert.idx This is makeindex, version 2.15 [TeX Live 2009] (kpathsea + Thai support). Scanning input file massxpert.idx....done (186 entries accepted, 0 rejected). Sorting entries.....done (1572 comparisons). Generating output file massxpert.ind....done (233 lines written, 0 warnings). Output written in massxpert.ind. Transcript written in massxpert.ilg. cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E chdir /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual /usr/bin/pdflatex -interaction=nonstopmode massxpert.tex This is pdfTeX, Version 3.1415926-1.40.10 (TeX Live 2009/Debian) entering extended mode (./massxpert.tex LaTeX2e <2009/09/24> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. 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Overfull \hbox (8.38528pt too wide) in paragraph at lines 38--42 \T1/aer/m/n/10 fully pro-grammable (that's the \T1/aer/m/sl/10 Xpert-Calc \T1/a er/m/n/10 mod-ule also part of the \T1/aer/m/sl/10 massXpert [1] [2] Overfull \hbox (10.50308pt too wide) in paragraph at lines 168--168 [][]\T1/aer/m/sc/20.74 Program Avail-abil-ity, Tech-ni-cal- [3] Underfull \hbox (badness 10000) in paragraph at lines 196--201 Overfull \hbox (4.74527pt too wide) in paragraph at lines 212--214 []\T1/aer/m/n/10 The \T1/aer/m/sl/10 Xpert-Def \T1/aer/m/n/10 mod-ule (def-i-ni -tion of atoms and of new poly-mer chemistries); [4] [5] Overfull \hbox (19.99072pt too wide) in paragraph at lines 266--270 []\T1/aer/m/n/10 The gen-eral pol-icy for di-rect-ing ques-tions, com-ments, fe a-ture re-quests, \T1/aer/m/sl/10 massXpert Overfull \hbox (6.16531pt too wide) in paragraph at lines 266--270 \T1/aer/m/n/10 pro-gram and/or \T1/aer/m/sl/10 massXpert \T1/aer/m/n/10 doc-u-m en-ta-tion bug re-ports[] should be self-explanatory Underfull \hbox (badness 10000) in paragraph at lines 275--277 [6 <./figures/addresses.png>]) (./installation.tex Chapter 2. Underfull \hbox (badness 10000) in paragraph at lines 5--8 [7] Underfull \hbox (badness 10000) in paragraph at lines 86--88 [8] Overfull \hbox (9.62535pt too wide) in paragraph at lines 194--199 \T1/aer/m/n/10 At this point the soft-ware should have in-stalled in the des-ti -na-tion tree (\T1/aett/m/n/10 /usr/local [9] [10] Underfull \hbox (badness 1406) in paragraph at lines 347--347 []\T1/aer/m/n/10 Figure 2.1: []\T1/aer/bx/sl/10 massXpert \T1/aer/bx/n/10 con-f ig-u-ra-tion set-tings. \T1/aer/m/n/10 Upon run-ning the Underfull \hbox (badness 10000) in paragraph at lines 351--362 [11] [12 <./figures/massxpert-configuration-settings-dlg.png>] [13] [14]) (./basics-polchem.tex Chapter 3. Overfull \hbox (1.969pt too wide) in paragraph at lines 13--13 [][]\T1/aer/m/sc/20.74 Polymers? Where? Ev-ery-where![] Overfull \hbox (7.65761pt too wide) in paragraph at lines 26--31 \T1/aer/m/it/10 molecules which are them-selves made from com-bi-na-tions of sm all sim-ple molecules\T1/aer/m/n/10 . [15] Underfull \vbox (badness 6876) has occurred while \output is active [16] [17 <./figures/peptbond-formation.png (PNG copy)>] [18 <./figures/prot-polymer.png (PNG copy)>] [19 <./figures/nucacbond-formation.png (PNG cop y)>] [20 <./figures/nucac-polymer.png (PNG copy)>] [21 <./figures/sacchbond-formation.png (PNG cop y)> <./figures/sacch-polymer.png (PNG copy)>] [22] [23] [24 <./figures/prot-cleavage.png (PNG copy )>] [25] [26] [27 <./figures/prot-fragmentation.png (PNG copy)>] Overfull \hbox (1.18713pt too wide) in paragraph at lines 735--736 \T1/aer/bx/it/10 b \T1/aer/bx/n/10 frag-ment se-ries[] \T1/aer/m/n/10 Sim-i-la rly, the mass cal-cu-la-tion is math-e-mat-i-cally ex-pressed [28] Overfull \hbox (9.24484pt too wide) in paragraph at lines 761--772 \T1/aer/m/n/10 sense that they do not hold nei-ther of the two pre-cur-sor poly -mer's ends. \T1/aer/m/sl/10 massXpert [29] [30 <./figures/dna-fragmentation.png ( PNG copy)>] [31] Overfull \hbox (2.33554pt too wide) in paragraph at lines 893--895 \T1/aer/m/n/10 To sum up all what we have seen so far with poly-mer chain dis-r upt-ing chemistries: Overfull \hbox (7.70595pt too wide) in paragraph at lines 914--917 []\T1/aer/m/n/10 Fragments are never ion-ized au-to-mat-i-cally; ion-iza-tion ( gain/loss of a charged [32]) (./basics-massspec.tex Chapter 4. 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In na-ture, biopoly- [48 <./figures/xpertdef-monomers-mass- differences.png>] [49 <./figures/xpertdef-modifications.p ng (PNG copy)>] [50 <./figures/xpertdef-crosslinkers.png ( PNG copy)>] [51 <./figures/xpertdef-cleavages.png>] Overfull \hbox (0.41591pt too wide) in paragraph at lines 547--562 \T1/aer/m/n/10 cleav-age spec-i-fi-ca-tion for ``CyanogenBromide''---that the o ligomers re-sult-ing from [52] Underfull \vbox (badness 10000) has occurred while \output is active [53 <./fig ures/xpertdef-fragmentations-simplest.png>] Underfull \hbox (badness 10000) in paragraph at lines 635--639 [54] [55 <./f igures/xpertdef-fragmentations-special-dna-a-base-case.png>] [56 <./figures/xpertde f-fragmentations-frag-rules.png>] Underfull \hbox (badness 10000) in paragraph at lines 747--758 Underfull \hbox (badness 10000) in paragraph at lines 782--790 [57] [58]) (./xpertcalc.tex Chapter 7. 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Underfull \vbox (badness 10000) has occurred while \output is active [69] Overfull \hbox (0.13066pt too wide) in paragraph at lines 32--32 [][]\T1/aer/m/sl/20.74 XpertEdit \T1/aer/m/sc/20.74 Op-er-a-tion: \T1/aer/m/it/ 20.74 In Me-dias Res[] [70 <./figures/xpertedit-sel ect-sample-sequence.png (PNG copy)>] [71 <./figures/xpertedit-choose-p ol-chem-def.png (PNG copy)>] [72 <./figures/xpertedit-protein-main-view.png (PN G copy)>] [73] Overfull \hbox (20.56702pt too wide) in paragraph at lines 362--365 []\T1/aer/m/sl/10 Chemistry[] \T1/aer/m/n/10 Cal-cu-late the monomeric/element [74] [75 <./figures/xpertedit-file-m enu.png (PNG copy)> <./figures/xpertedit-chemistry-menu.png (PNG copy)>] Overfull \hbox (4.06323pt too wide) in paragraph at lines 435--436 [] [76 <./figures/xpertedit-3-letter-code-whole-process.png (PNG copy)>] [77] [78 <./figures/xp ertedit-sequence-editor-bad-char.png (PNG copy)>] [79 <./figures/xpertedit-find-seq uence-dlg.png>] Underfull \vbox (badness 1297) has occurred while \output is active [80 <./figu res/xpertedit-sequence-editor-sequence-import-errors-first.png (PNG copy)>] Underfull \hbox (badness 10000) in paragraph at lines 728--730 [81 <./figures/xpertedit-sequence-editor-sequence-import-errors-second.png (PNG copy)>] Underfull \hbox (badness 10000) in paragraph at lines 770--781 [82] [83] Underfull \vbox (badness 1584) has occurred while \output is active [84 <./figu res/xpertedit-modify-monomer.png>] Underfull \vbox (badness 10000) has occurred while \output is active [85 <./fig ures/xpertedit-modify-monomer-manually-defined-modif.png (PNG copy)>] [86 <./figures/xpertedit-modify-poly mer.png (PNG copy)>] [87 <./figures/xpertedit-cros s-link-monomers.png (PNG copy)>] [88 <./figures/xpertedit-cross-linked-mon omers.png (PNG copy)>] [89 <./figures/xpertedit-cleavages.png>] [90] [91 <./figures/xpertedit-spectrum-creation-from-cleavages.png>] [92 <./figur es/xpertedit-spectrum-simulation-cleavage-oligomers.png (PNG copy)>] [93] [94 <./figures/xpertedit-fragmentation.png (PNG copy)>] [95 <./figures/xpe rtedit-cfp-chromophore-disulfide-bond-no-account-cross-links.png pdfTeX warning: /usr/bin/pdflatex (file ./figures/xpertedit-cfp-chromophore-dis ulfide-bond-no-account-cross-links.png): large interlaced PNG might cause out o f memory (use non-interlaced PNG to fix this) >] [96 <./figures/xpertedit-cfp-chromophore-disulfide-bond-account-cross-links. png>] [97 <./figures/xpertedit-fragmentation-cross-linked-oligomer.png>] Overfull \hbox (4.71663pt too wide) in paragraph at lines 1536--1538 []\T1/aer/m/n/10 Fragments 15$\OMS/cmsy/m/n/10 $ \T1/aer/m/n/10 and 16$\OMS/cm sy/m/n/10 $ \T1/aer/m/n/10 ac-count for all the cross-links of the oligomer. [98] [99 <./figures/xpertedit-mass-sear ch.png (PNG copy)>] [100 <./figures/xpertedit-f iltering-oligomer-data.png (PNG copy)>] [101] [102 <./figures/xpertedit-mz-rat io-calculator.png (PNG copy)> <./figures/xpertedit-compositions.png (PNG copy)> ] [103] [104 <./figures/protein -monomer-acidobasic-data.png>] [105] [106] Overfull \hbox (5.1574pt too wide) in paragraph at lines 1969--1975 [][]\T1/aett/m/n/10 left_trapped \T1/aer/m/n/10 This el-e-me nt in-di-cates that the chem- Overfull \hbox (11.92708pt too wide) in paragraph at lines 1991--1999 [][]\T1/aett/m/n/10 LOST \T1/aer/m/n/10 This el-e-ment ac-tu -ally in-di-cates what should [107] [108] [109 <./figures/xpertedit-net- charge-pka-ph-pi.png (PNG copy)>] [110]) (./xpertminer.tex Chapter 9. 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[119] Overfull \hbox (14.57152pt too wide) in paragraph at lines 98--102 []\T1/aett/m/n/10 monomer_dictionary\T1/aer/m/n/10 : file es-tab-lish-ing the r e-la-tion-ship be-tween any monomer [120] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # between the codes of each monomer and their graphic file (p ixmap[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] [121] [122 <./figures/pol-chem-defs-directory-protein-and-saccharide.png (PNG c opy)>] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # This is the modification_dictionary file where the correspo ndences[] Overfull \hbox (21.79932pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # between the name of each modification and their graphic fil e (pixmap[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # sequence editor are made. Also, the graphical operation tha t is to[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # be performed upon chemical modification of a monomer is lis ted ('T'[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # for transparent and 'O' for opaque). See the manual for det ails.[] [123] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # where Phosphorylation is the name of the modification. T in dicates[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # process (O indicates that the visual rendering of the modif ication[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] Overfull \hbox (82.5854pt too wide) in paragraph at lines 272--283 \T1/aer/m/n/10 listed in the file for the mod-i-fi-ca-tion. 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(./protein-1-letter.xml.tex Overfull \hbox (12.51198pt too wide) in paragraph at lines 2--2 []\T1/aer/m/sc/20.74 The Pro-tein Chem-istry Def-i-ni-tion Overfull \hbox (11.31934pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (278.55884pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] [127] Overfull \hbox (37.51929pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] Overfull \hbox (89.91919pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154]) [155] (./leu-enkephalin.mxp.tex Overfull \hbox (11.31934pt too wide) in paragraph at lines 52--52 []\T1/aett/m/n/10 Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (168.51904pt too wide) in paragraph at lines 52--52 []\T1/aett/m/n/10 [] ) [156] (./pka_ph_pi.xml.tex Overfull \hbox (11.31934pt too wide) in paragraph at lines 526--526 []\T1/aett/m/n/10 Copyright 2003 2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 526--526 []\T1/aett/m/n/10 [] Underfull \vbox (badness 10000) has occurred while \output is active [157] [158] [159] [160] [161] [162] [163] [164] [165] [166]) [167] (./GNU-GPL-3.0.tex Overfull \hbox (17.38269pt too wide) in paragraph at lines 2--2 []\T1/aer/m/sc/20.74 GNU Gen-eral Pub-lic Li-cense Text [168] [169] [170] [171] [172] [173] [174] [175] Overfull \hbox (1.69012pt too wide) in paragraph at lines 512--516 []\T1/aer/m/n/10 Each con-trib-u-tor grants you a non-exclusive, world-wide, ro yalty-free patent [176] [177] Overfull \hbox (6.92036pt too wide) in paragraph at lines 616--625 \T1/aer/m/n/10 STATED IN WRIT-ING THE COPY-RIGHT HOLD-ERS AND/OR OTHER Overfull \hbox (2.58072pt too wide) in paragraph at lines 616--625 \T1/aer/m/n/10 PAR-TIES PRO-VIDE THE PRO-GRAM ``AS IS'' WITH-OUT WAR-RANTY Overfull \hbox (18.23813pt too wide) in paragraph at lines 628--638 []\T1/aer/m/n/10 IN NO EVENT UN-LESS RE-QUIRED BY AP-PLI-CA-BLE LAW OR AGREED Overfull \hbox (5.53944pt too wide) in paragraph at lines 628--638 \T1/aer/m/n/10 TO IN WRIT-ING WILL ANY COPY-RIGHT HOLDER, OR ANY OTHER Overfull \hbox (9.5637pt too wide) in paragraph at lines 628--638 \T1/aer/m/n/10 CLUD-ING ANY GEN-ERAL, SPE-CIAL, IN-CI-DEN-TAL OR CON-SE-QUEN- [178] Overfull \hbox (35.02808pt too wide) in paragraph at lines 679--682 \T1/aer/m/n/10 cense along with this pro-gram. If not, see http://www.gnu.org/l icenses/. ) [179] [180]) (./index.tex (./massxpert.ind [181] [182] [183])) (./massxpert.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information)< /usr/share/texmf-texlive/fonts/type1/public/amsfonts/cm/cmr10.pfb> Output written on massxpert.pdf (199 pages, 10733104 bytes). Transcript written on massxpert.log. cd /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual && /usr/bin/cmake -E chdir /build/buildd/massxpert-3.2.0/debian/build-indep/usermanual /usr/bin/pdflatex -interaction=nonstopmode massxpert.tex This is pdfTeX, Version 3.1415926-1.40.10 (TeX Live 2009/Debian) entering extended mode (./massxpert.tex LaTeX2e <2009/09/24> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. 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Overfull \hbox (8.38528pt too wide) in paragraph at lines 38--42 \T1/aer/m/n/10 fully pro-grammable (that's the \T1/aer/m/sl/10 Xpert-Calc \T1/a er/m/n/10 mod-ule also part of the \T1/aer/m/sl/10 massXpert [1] [2] Overfull \hbox (10.50308pt too wide) in paragraph at lines 168--168 [][]\T1/aer/m/sc/20.74 Program Avail-abil-ity, Tech-ni-cal- [3] Underfull \hbox (badness 10000) in paragraph at lines 196--201 Overfull \hbox (4.74527pt too wide) in paragraph at lines 212--214 []\T1/aer/m/n/10 The \T1/aer/m/sl/10 Xpert-Def \T1/aer/m/n/10 mod-ule (def-i-ni -tion of atoms and of new poly-mer chemistries); [4] [5] Overfull \hbox (19.99072pt too wide) in paragraph at lines 266--270 []\T1/aer/m/n/10 The gen-eral pol-icy for di-rect-ing ques-tions, com-ments, fe a-ture re-quests, \T1/aer/m/sl/10 massXpert Overfull \hbox (6.16531pt too wide) in paragraph at lines 266--270 \T1/aer/m/n/10 pro-gram and/or \T1/aer/m/sl/10 massXpert \T1/aer/m/n/10 doc-u-m en-ta-tion bug re-ports[] should be self-explanatory Underfull \hbox (badness 10000) in paragraph at lines 275--277 [6 <./figures/addresses.png>]) (./installation.tex Chapter 2. Underfull \hbox (badness 10000) in paragraph at lines 5--8 [7] Underfull \hbox (badness 10000) in paragraph at lines 86--88 [8] Overfull \hbox (9.62535pt too wide) in paragraph at lines 194--199 \T1/aer/m/n/10 At this point the soft-ware should have in-stalled in the des-ti -na-tion tree (\T1/aett/m/n/10 /usr/local [9] [10] Underfull \hbox (badness 1406) in paragraph at lines 347--347 []\T1/aer/m/n/10 Figure 2.1: []\T1/aer/bx/sl/10 massXpert \T1/aer/bx/n/10 con-f ig-u-ra-tion set-tings. \T1/aer/m/n/10 Upon run-ning the Underfull \hbox (badness 10000) in paragraph at lines 351--362 [11] [12 <./figures/massxpert-configuration-settings-dlg.png>] [13] [14]) (./basics-polchem.tex Chapter 3. Overfull \hbox (1.969pt too wide) in paragraph at lines 13--13 [][]\T1/aer/m/sc/20.74 Polymers? Where? Ev-ery-where![] Overfull \hbox (7.65761pt too wide) in paragraph at lines 26--31 \T1/aer/m/it/10 molecules which are them-selves made from com-bi-na-tions of sm all sim-ple molecules\T1/aer/m/n/10 . [15] Underfull \vbox (badness 6876) has occurred while \output is active [16] [17 <./figures/peptbond-formation.png (PNG copy)>] [18 <./figures/prot-polymer.png (PNG copy)>] [19 <./figures/nucacbond-formation.png (PNG cop y)>] [20 <./figures/nucac-polymer.png (PNG copy)>] [21 <./figures/sacchbond-formation.png (PNG cop y)> <./figures/sacch-polymer.png (PNG copy)>] [22] [23] [24 <./figures/prot-cleavage.png (PNG copy )>] [25] [26] [27 <./figures/prot-fragmentation.png (PNG copy)>] Overfull \hbox (1.18713pt too wide) in paragraph at lines 735--736 \T1/aer/bx/it/10 b \T1/aer/bx/n/10 frag-ment se-ries[] \T1/aer/m/n/10 Sim-i-la rly, the mass cal-cu-la-tion is math-e-mat-i-cally ex-pressed [28] Overfull \hbox (9.24484pt too wide) in paragraph at lines 761--772 \T1/aer/m/n/10 sense that they do not hold nei-ther of the two pre-cur-sor poly -mer's ends. \T1/aer/m/sl/10 massXpert [29] [30 <./figures/dna-fragmentation.png ( PNG copy)>] [31] Overfull \hbox (2.33554pt too wide) in paragraph at lines 893--895 \T1/aer/m/n/10 To sum up all what we have seen so far with poly-mer chain dis-r upt-ing chemistries: Overfull \hbox (7.70595pt too wide) in paragraph at lines 914--917 []\T1/aer/m/n/10 Fragments are never ion-ized au-to-mat-i-cally; ion-iza-tion ( gain/loss of a charged [32]) (./basics-massspec.tex Chapter 4. Underfull \vbox (badness 1033) has occurred while \output is active [33] [34] [35] Underfull \hbox (badness 10000) in paragraph at lines 174--176 Underfull \hbox (badness 10000) in paragraph at lines 197--199 [36] [37] [38]) (./generalities.tex Chapter 5. [39] [40] [41] [42]) (./xpertdef.tex Chapter 6. (/usr/share/texmf-texlive/tex/latex/ae/t1aess.fd) [43] LaTeX Warning: `!h' float specifier changed to `!ht'. [44 <./figures/select-pol-chem-def.png (PNG co py)>] [45 <./figures/xpertdef-pol-chem-def.png (PNG copy)>] [46 <./figures/xper tdef-atoms.png (PNG copy)>] [47 <./figures/xpertdef-monomers.png>] Overfull \hbox (5.29686pt too wide) in paragraph at lines 297--306 \T1/aer/m/n/10 Polymer are of-ten ei-ther chem-i-cally or bio-chem-i-cally mod- i-fied. 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[63] [64 <./figures/xpertcalc-protein -1-letter-recorder.png (PNG copy)>] [65 <./figures/xpertcalc-mz-calculator.png> ] [66 <./figures/x pertcalc-isotopic-pattern-calculator.png>] [67] [68 <./figures/xpertcalc-isotopic-pattern-calculator-example-graph.png>]) (./xpertedit.tex Chapter 8. Underfull \vbox (badness 10000) has occurred while \output is active [69] Overfull \hbox (0.13066pt too wide) in paragraph at lines 32--32 [][]\T1/aer/m/sl/20.74 XpertEdit \T1/aer/m/sc/20.74 Op-er-a-tion: \T1/aer/m/it/ 20.74 In Me-dias Res[] [70 <./figures/xpertedit-sel ect-sample-sequence.png (PNG copy)>] [71 <./figures/xpertedit-choose-p ol-chem-def.png (PNG copy)>] [72 <./figures/xpertedit-protein-main-view.png (PN G copy)>] [73] Overfull \hbox (20.56702pt too wide) in paragraph at lines 362--365 []\T1/aer/m/sl/10 Chemistry[] \T1/aer/m/n/10 Cal-cu-late the monomeric/element [74] [75 <./figures/xpertedit-file-m enu.png (PNG copy)> <./figures/xpertedit-chemistry-menu.png (PNG copy)>] Overfull \hbox (4.06323pt too wide) in paragraph at lines 435--436 [] [76 <./figures/xpertedit-3-letter-code-whole-process.png (PNG copy)>] [77] [78 <./figures/xp ertedit-sequence-editor-bad-char.png (PNG copy)>] [79 <./figures/xpertedit-find-seq uence-dlg.png>] Underfull \vbox (badness 1297) has occurred while \output is active [80 <./figu res/xpertedit-sequence-editor-sequence-import-errors-first.png (PNG copy)>] Underfull \hbox (badness 10000) in paragraph at lines 728--730 [81 <./figures/xpertedit-sequence-editor-sequence-import-errors-second.png (PNG copy)>] Underfull \hbox (badness 10000) in paragraph at lines 770--781 [82] [83] Underfull \vbox (badness 1584) has occurred while \output is active [84 <./figu res/xpertedit-modify-monomer.png>] Underfull \vbox (badness 10000) has occurred while \output is active [85 <./fig ures/xpertedit-modify-monomer-manually-defined-modif.png (PNG copy)>] [86 <./figures/xpertedit-modify-poly mer.png (PNG copy)>] [87 <./figures/xpertedit-cros s-link-monomers.png (PNG copy)>] [88 <./figures/xpertedit-cross-linked-mon omers.png (PNG copy)>] [89 <./figures/xpertedit-cleavages.png>] [90] [91 <./figures/xpertedit-spectrum-creation-from-cleavages.png>] [92 <./figur es/xpertedit-spectrum-simulation-cleavage-oligomers.png (PNG copy)>] [93] [94 <./figures/xpertedit-fragmentation.png (PNG copy)>] [95 <./figures/xpe rtedit-cfp-chromophore-disulfide-bond-no-account-cross-links.png pdfTeX warning: /usr/bin/pdflatex (file ./figures/xpertedit-cfp-chromophore-dis ulfide-bond-no-account-cross-links.png): large interlaced PNG might cause out o f memory (use non-interlaced PNG to fix this) >] [96 <./figures/xpertedit-cfp-chromophore-disulfide-bond-account-cross-links. png>] [97 <./figures/xpertedit-fragmentation-cross-linked-oligomer.png>] Overfull \hbox (4.71663pt too wide) in paragraph at lines 1536--1538 []\T1/aer/m/n/10 Fragments 15$\OMS/cmsy/m/n/10 $ \T1/aer/m/n/10 and 16$\OMS/cm sy/m/n/10 $ \T1/aer/m/n/10 ac-count for all the cross-links of the oligomer. [98] [99 <./figures/xpertedit-mass-sear ch.png (PNG copy)>] [100 <./figures/xpertedit-f iltering-oligomer-data.png (PNG copy)>] [101] [102 <./figures/xpertedit-mz-rat io-calculator.png (PNG copy)> <./figures/xpertedit-compositions.png (PNG copy)> ] [103] [104 <./figures/protein -monomer-acidobasic-data.png>] [105] [106] Overfull \hbox (5.1574pt too wide) in paragraph at lines 1969--1975 [][]\T1/aett/m/n/10 left_trapped \T1/aer/m/n/10 This el-e-me nt in-di-cates that the chem- Overfull \hbox (11.92708pt too wide) in paragraph at lines 1991--1999 [][]\T1/aett/m/n/10 LOST \T1/aer/m/n/10 This el-e-ment ac-tu -ally in-di-cates what should [107] [108] [109 <./figures/xpertedit-net- charge-pka-ph-pi.png (PNG copy)>] [110]) (./xpertminer.tex Chapter 9. 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[119] Overfull \hbox (14.57152pt too wide) in paragraph at lines 98--102 []\T1/aett/m/n/10 monomer_dictionary\T1/aer/m/n/10 : file es-tab-lish-ing the r e-la-tion-ship be-tween any monomer [120] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # between the codes of each monomer and their graphic file (p ixmap[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] [121] [122 <./figures/pol-chem-defs-directory-protein-and-saccharide.png (PNG c opy)>] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # This is the modification_dictionary file where the correspo ndences[] Overfull \hbox (21.79932pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # between the name of each modification and their graphic fil e (pixmap[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # sequence editor are made. Also, the graphical operation tha t is to[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # be performed upon chemical modification of a monomer is lis ted ('T'[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # for transparent and 'O' for opaque). See the manual for det ails.[] [123] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # where Phosphorylation is the name of the modification. T in dicates[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # process (O indicates that the visual rendering of the modif ication[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] Overfull \hbox (82.5854pt too wide) in paragraph at lines 272--283 \T1/aer/m/n/10 listed in the file for the mod-i-fi-ca-tion. 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If not, see http://www.gnu.org/l icenses/. ) [179] [180]) (./index.tex (./massxpert.ind [181] [182] [183])) (./massxpert.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information)< /usr/share/texmf-texlive/fonts/type1/public/amsfonts/cm/cmr10.pfb> Output written on massxpert.pdf (199 pages, 10733727 bytes). Transcript written on massxpert.log. make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-indep' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 [100%] Built target pdf make[2]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-indep' /usr/bin/cmake -E cmake_progress_start /build/buildd/massxpert-3.2.0/debian/build-indep/CMakeFiles 0 make[1]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-indep' touch build-indep-stamp dh_testdir dh_prep -a rm -f debian/massxpert.substvars rm -f debian/massxpert.*.debhelper rm -rf debian/massxpert/ rm -f debian/massxpert-dbg.substvars rm -f debian/massxpert-dbg.*.debhelper rm -rf debian/massxpert-dbg/ rm -rf /build/buildd/massxpert-3.2.0/debian/tmp-arch mkdir -p /build/buildd/massxpert-3.2.0/debian/build-arch 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cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 2%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 2%] Generating moc_chemEntVignette.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/lib/moc_chemEntVignette.cxx /build/buildd/massxpert-3.2.0/lib/chemEntVignette.hpp Generating moc_application.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_application.cxx 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/build/buildd/massxpert-3.2.0/debian/build-arch/lib/moc_crossLinkList.cxx /build/buildd/massxpert-3.2.0/lib/crossLinkList.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 3%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 3%] Generating moc_atomDefDlg.cxx Generating moc_isotopicPatternCalculator.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_atomDefDlg.cxx /build/buildd/massxpert-3.2.0/gui/atomDefDlg.hpp cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/lib/moc_isotopicPatternCalculator.cxx /build/buildd/massxpert-3.2.0/lib/isotopicPatternCalculator.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 68 [ 4%] Generating moc_calculatorChemPadDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_calculatorChemPadDlg.cxx /build/buildd/massxpert-3.2.0/gui/calculatorChemPadDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 4%] [ 4%] Generating moc_calculatorChemPadGroupBox.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_calculatorChemPadGroupBox.cxx /build/buildd/massxpert-3.2.0/gui/calculatorChemPadGroupBox.hpp Generating moc_oligomerList.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/lib/moc_oligomerList.cxx /build/buildd/massxpert-3.2.0/lib/oligomerList.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 4%] Generating moc_calculatorRecorderDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_calculatorRecorderDlg.cxx /build/buildd/massxpert-3.2.0/gui/calculatorRecorderDlg.hpp cd /build/buildd/massxpert-3.2.0/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.0 /build/buildd/massxpert-3.2.0/lib /build/buildd/massxpert-3.2.0/debian/build-arch /build/buildd/massxpert-3.2.0/debian/build-arch/lib /build/buildd/massxpert-3.2.0/debian/build-arch/lib/CMakeFiles/masslib.dir/DependInfo.cmake --color= /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 69 [ 5%] Generating moc_calculatorWnd.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_calculatorWnd.cxx /build/buildd/massxpert-3.2.0/gui/calculatorWnd.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 5%] Generating moc_chemPadButton.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_chemPadButton.cxx /build/buildd/massxpert-3.2.0/gui/chemPadButton.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 5%] Generating moc_cleavageDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_cleavageDlg.cxx /build/buildd/massxpert-3.2.0/gui/cleavageDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 70 [ 6%] Generating moc_cleaveOligomerTableView.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_cleaveOligomerTableView.cxx /build/buildd/massxpert-3.2.0/gui/cleaveOligomerTableView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 6%] Generating moc_cleaveOligomerTableViewMimeData.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_cleaveOligomerTableViewMimeData.cxx /build/buildd/massxpert-3.2.0/gui/cleaveOligomerTableViewMimeData.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 6%] Generating moc_cleaveOligomerTableViewModel.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_cleaveOligomerTableViewModel.cxx /build/buildd/massxpert-3.2.0/gui/cleaveOligomerTableViewModel.hpp Scanning dependencies of target masslib make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/make -f lib/CMakeFiles/masslib.dir/build.make lib/CMakeFiles/masslib.dir/build /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 71 [ 7%] Generating moc_cleaveSpecDefDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_cleaveSpecDefDlg.cxx /build/buildd/massxpert-3.2.0/gui/cleaveSpecDefDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 7%] Generating moc_compositionsDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_compositionsDlg.cxx /build/buildd/massxpert-3.2.0/gui/compositionsDlg.hpp make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 7%] Building CXX object lib/CMakeFiles/masslib.dir/atomCount.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/atomCount.cpp.o -c /build/buildd/massxpert-3.2.0/lib/atomCount.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 7%] Generating moc_compositionTreeView.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_compositionTreeView.cxx /build/buildd/massxpert-3.2.0/gui/compositionTreeView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 72 [ 8%] Generating moc_compositionTreeViewModel.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_compositionTreeViewModel.cxx /build/buildd/massxpert-3.2.0/gui/compositionTreeViewModel.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 8%] Generating moc_configurationSettingsDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_configurationSettingsDlg.cxx /build/buildd/massxpert-3.2.0/gui/configurationSettingsDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 8%] Generating moc_crossLinkerDefDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_crossLinkerDefDlg.cxx /build/buildd/massxpert-3.2.0/gui/crossLinkerDefDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 73 [ 9%] Generating moc_decimalPlacesOptionsDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_decimalPlacesOptionsDlg.cxx /build/buildd/massxpert-3.2.0/gui/decimalPlacesOptionsDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 9%] Generating moc_fragmentationDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_fragmentationDlg.cxx /build/buildd/massxpert-3.2.0/gui/fragmentationDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 9%] Generating moc_fragmentOligomerTableView.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_fragmentOligomerTableView.cxx /build/buildd/massxpert-3.2.0/gui/fragmentOligomerTableView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 74 [ 10%] Generating moc_fragmentOligomerTableViewMimeData.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_fragmentOligomerTableViewMimeData.cxx /build/buildd/massxpert-3.2.0/gui/fragmentOligomerTableViewMimeData.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 10%] Generating moc_fragmentOligomerTableViewModel.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_fragmentOligomerTableViewModel.cxx /build/buildd/massxpert-3.2.0/gui/fragmentOligomerTableViewModel.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 10%] Generating moc_fragSpecDefDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_fragSpecDefDlg.cxx /build/buildd/massxpert-3.2.0/gui/fragSpecDefDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 75 [ 11%] Generating moc_mainWindow.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mainWindow.cxx /build/buildd/massxpert-3.2.0/gui/mainWindow.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 11%] Generating moc_massSearchDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_massSearchDlg.cxx /build/buildd/massxpert-3.2.0/gui/massSearchDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 11%] Generating moc_massSearchOligomerTableView.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_massSearchOligomerTableView.cxx /build/buildd/massxpert-3.2.0/gui/massSearchOligomerTableView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 76 [ 12%] Generating moc_massSearchOligomerTableViewMimeData.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_massSearchOligomerTableViewMimeData.cxx /build/buildd/massxpert-3.2.0/gui/massSearchOligomerTableViewMimeData.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 12%] Generating moc_massSearchOligomerTableViewModel.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_massSearchOligomerTableViewModel.cxx /build/buildd/massxpert-3.2.0/gui/massSearchOligomerTableViewModel.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 12%] Generating moc_modifDefDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_modifDefDlg.cxx /build/buildd/massxpert-3.2.0/gui/modifDefDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 77 [ 13%] Generating moc_monomerCodeEvaluator.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_monomerCodeEvaluator.cxx /build/buildd/massxpert-3.2.0/gui/monomerCodeEvaluator.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 13%] Generating moc_monomerCrossLinkDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_monomerCrossLinkDlg.cxx /build/buildd/massxpert-3.2.0/gui/monomerCrossLinkDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 78 [ 14%] Generating moc_monomerDefDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_monomerDefDlg.cxx /build/buildd/massxpert-3.2.0/gui/monomerDefDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 14%] Generating moc_monomerModificationDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_monomerModificationDlg.cxx /build/buildd/massxpert-3.2.0/gui/monomerModificationDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 14%] Generating moc_mzCalculationDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzCalculationDlg.cxx /build/buildd/massxpert-3.2.0/gui/mzCalculationDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 79 [ 15%] Generating moc_mzCalculationTreeView.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzCalculationTreeView.cxx /build/buildd/massxpert-3.2.0/gui/mzCalculationTreeView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 15%] Generating moc_mzCalculationTreeViewModel.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzCalculationTreeViewModel.cxx /build/buildd/massxpert-3.2.0/gui/mzCalculationTreeViewModel.hpp [ 15%] Building CXX object lib/CMakeFiles/masslib.dir/atom.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/atom.cpp.o -c /build/buildd/massxpert-3.2.0/lib/atom.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 15%] Generating moc_mzLabInputOligomerTableView.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzLabInputOligomerTableView.cxx /build/buildd/massxpert-3.2.0/gui/mzLabInputOligomerTableView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 80 [ 16%] Generating moc_mzLabInputOligomerTableViewDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzLabInputOligomerTableViewDlg.cxx /build/buildd/massxpert-3.2.0/gui/mzLabInputOligomerTableViewDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 16%] Generating moc_mzLabInputOligomerTableViewModel.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzLabInputOligomerTableViewModel.cxx /build/buildd/massxpert-3.2.0/gui/mzLabInputOligomerTableViewModel.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 16%] Generating moc_mzLabOutputOligomerTableView.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzLabOutputOligomerTableView.cxx /build/buildd/massxpert-3.2.0/gui/mzLabOutputOligomerTableView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 81 [ 17%] Generating 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/build/buildd/massxpert-3.2.0/gui/mzLabOutputOligomerTableViewModel.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 17%] Generating moc_mzLabWnd.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzLabWnd.cxx /build/buildd/massxpert-3.2.0/gui/mzLabWnd.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 82 [ 18%] Generating moc_pkaPhPiDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_pkaPhPiDlg.cxx /build/buildd/massxpert-3.2.0/gui/pkaPhPiDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 18%] Generating moc_polChemDefWnd.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_polChemDefWnd.cxx /build/buildd/massxpert-3.2.0/gui/polChemDefWnd.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 18%] Generating moc_polymerModificationDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_polymerModificationDlg.cxx /build/buildd/massxpert-3.2.0/gui/polymerModificationDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 83 [ 19%] Generating moc_sequenceEditorFindDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_sequenceEditorFindDlg.cxx /build/buildd/massxpert-3.2.0/gui/sequenceEditorFindDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 19%] Generating moc_sequenceEditorGraphicsView.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_sequenceEditorGraphicsView.cxx /build/buildd/massxpert-3.2.0/gui/sequenceEditorGraphicsView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 19%] Generating moc_sequenceEditorWnd.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_sequenceEditorWnd.cxx /build/buildd/massxpert-3.2.0/gui/sequenceEditorWnd.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 84 [ 20%] Generating moc_sequenceImportDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_sequenceImportDlg.cxx /build/buildd/massxpert-3.2.0/gui/sequenceImportDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 20%] Generating moc_sequencePurificationDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_sequencePurificationDlg.cxx /build/buildd/massxpert-3.2.0/gui/sequencePurificationDlg.hpp /usr/bin/cmake -E cmake_progress_report 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/build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_atomDefDlg.h /build/buildd/massxpert-3.2.0/gui/ui/atomDefDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 21%] Generating ui_calculatorChemPadDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_calculatorChemPadDlg.h /build/buildd/massxpert-3.2.0/gui/ui/calculatorChemPadDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 86 [ 22%] Generating ui_calculatorRecorderDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_calculatorRecorderDlg.h /build/buildd/massxpert-3.2.0/gui/ui/calculatorRecorderDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 22%] Generating ui_calculatorWnd.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_calculatorWnd.h /build/buildd/massxpert-3.2.0/gui/ui/calculatorWnd.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 22%] Generating ui_cleavageDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_cleavageDlg.h /build/buildd/massxpert-3.2.0/gui/ui/cleavageDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 87 [ 23%] Generating ui_cleaveSpecDefDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_cleaveSpecDefDlg.h /build/buildd/massxpert-3.2.0/gui/ui/cleaveSpecDefDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 23%] Generating ui_compositionsDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_compositionsDlg.h /build/buildd/massxpert-3.2.0/gui/ui/compositionsDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 23%] Generating ui_configurationSettingsDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_configurationSettingsDlg.h /build/buildd/massxpert-3.2.0/gui/ui/configurationSettingsDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 88 [ 24%] Generating ui_crossLinkerDefDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_crossLinkerDefDlg.h /build/buildd/massxpert-3.2.0/gui/ui/crossLinkerDefDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 24%] Generating ui_fragmentationDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_fragmentationDlg.h /build/buildd/massxpert-3.2.0/gui/ui/fragmentationDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 89 [ 25%] Generating ui_fragSpecDefDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_fragSpecDefDlg.h /build/buildd/massxpert-3.2.0/gui/ui/fragSpecDefDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 25%] Generating ui_decimalPlacesOptionsDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_decimalPlacesOptionsDlg.h /build/buildd/massxpert-3.2.0/gui/ui/decimalPlacesOptionsDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 3 [ 26%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles Building CXX object lib/CMakeFiles/masslib.dir/calcOptions.cpp.o [ 26%] cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/calcOptions.cpp.o -c /build/buildd/massxpert-3.2.0/lib/calcOptions.cpp Generating ui_massSearchDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_massSearchDlg.h /build/buildd/massxpert-3.2.0/gui/ui/massSearchDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 90 [ 27%] Generating ui_modifDefDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_modifDefDlg.h /build/buildd/massxpert-3.2.0/gui/ui/modifDefDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 27%] Generating ui_monomerCrossLinkDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_monomerCrossLinkDlg.h /build/buildd/massxpert-3.2.0/gui/ui/monomerCrossLinkDlg.ui /usr/bin/cmake -E 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/build/buildd/massxpert-3.2.0/gui/ui/mzCalculationDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 28%] Generating ui_mzLabInputOligomerTableViewDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_mzLabInputOligomerTableViewDlg.h /build/buildd/massxpert-3.2.0/gui/ui/mzLabInputOligomerTableViewDlg.ui /build/buildd/massxpert-3.2.0/gui/ui/mzLabInputOligomerTableViewDlg.ui: Warning: The name 'gridLayout' (QGridLayout) is already in use, defaulting to 'gridLayout1'. /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 92 [ 29%] Generating ui_mzLabOutputOligomerTableViewDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_mzLabOutputOligomerTableViewDlg.h /build/buildd/massxpert-3.2.0/gui/ui/mzLabOutputOligomerTableViewDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 29%] Generating ui_mzLabWnd.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_mzLabWnd.h /build/buildd/massxpert-3.2.0/gui/ui/mzLabWnd.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 29%] Generating ui_pkaPhPiDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_pkaPhPiDlg.h /build/buildd/massxpert-3.2.0/gui/ui/pkaPhPiDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 93 [ 30%] Generating ui_polChemDefWnd.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_polChemDefWnd.h /build/buildd/massxpert-3.2.0/gui/ui/polChemDefWnd.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 30%] Generating ui_polymerModificationDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_polymerModificationDlg.h /build/buildd/massxpert-3.2.0/gui/ui/polymerModificationDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 30%] Generating ui_sequenceEditorFindDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_sequenceEditorFindDlg.h /build/buildd/massxpert-3.2.0/gui/ui/sequenceEditorFindDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 94 [ 31%] Generating ui_sequenceEditorWnd.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_sequenceEditorWnd.h /build/buildd/massxpert-3.2.0/gui/ui/sequenceEditorWnd.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 31%] Generating ui_sequenceImportDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_sequenceImportDlg.h /build/buildd/massxpert-3.2.0/gui/ui/sequenceImportDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 31%] Generating ui_sequencePurificationDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_sequencePurificationDlg.h /build/buildd/massxpert-3.2.0/gui/ui/sequencePurificationDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 95 [ 32%] Generating ui_spectrumCalculationDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/gui/ui_spectrumCalculationDlg.h /build/buildd/massxpert-3.2.0/gui/ui/spectrumCalculationDlg.ui cd /build/buildd/massxpert-3.2.0/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.0 /build/buildd/massxpert-3.2.0/gui /build/buildd/massxpert-3.2.0/debian/build-arch /build/buildd/massxpert-3.2.0/debian/build-arch/gui /build/buildd/massxpert-3.2.0/debian/build-arch/gui/CMakeFiles/massxpert.dir/DependInfo.cmake --color= /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 32%] Building CXX object lib/CMakeFiles/masslib.dir/peakCentroid.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/peakCentroid.cpp.o -c /build/buildd/massxpert-3.2.0/lib/peakCentroid.cpp Scanning dependencies of target massxpert make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/make -f gui/CMakeFiles/massxpert.dir/build.make gui/CMakeFiles/massxpert.dir/build /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 32%] Building CXX object lib/CMakeFiles/masslib.dir/chemEntVignette.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/chemEntVignette.cpp.o -c /build/buildd/massxpert-3.2.0/lib/chemEntVignette.cpp make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 32%] Building CXX object gui/CMakeFiles/massxpert.dir/aboutDlg.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/aboutDlg.cpp.o -c /build/buildd/massxpert-3.2.0/gui/aboutDlg.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 4 [ 33%] Building CXX object lib/CMakeFiles/masslib.dir/chemEntVignetteRenderer.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/chemEntVignetteRenderer.cpp.o -c /build/buildd/massxpert-3.2.0/lib/chemEntVignetteRenderer.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 33%] Building CXX object lib/CMakeFiles/masslib.dir/chemicalGroup.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/chemicalGroup.cpp.o -c /build/buildd/massxpert-3.2.0/lib/chemicalGroup.cpp /usr/bin/cmake -E 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/build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/chemicalGroupRule.cpp.o -c /build/buildd/massxpert-3.2.0/lib/chemicalGroupRule.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 5 [ 34%] Building CXX object lib/CMakeFiles/masslib.dir/cleaveMotif.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/cleaveMotif.cpp.o -c /build/buildd/massxpert-3.2.0/lib/cleaveMotif.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 34%] Building CXX object lib/CMakeFiles/masslib.dir/cleaveOligomer.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/cleaveOligomer.cpp.o -c /build/buildd/massxpert-3.2.0/lib/cleaveOligomer.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 26 [ 35%] Building CXX object gui/CMakeFiles/massxpert.dir/atomDefDlg.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/atomDefDlg.cpp.o -c 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-I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/calculatorChemPadDlg.cpp.o -c /build/buildd/massxpert-3.2.0/gui/calculatorChemPadDlg.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 36%] Building CXX object lib/CMakeFiles/masslib.dir/cleaveRule.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib 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-I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/crossLinkerSpec.cpp.o -c /build/buildd/massxpert-3.2.0/lib/crossLinkerSpec.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 9 [ 40%] Building CXX object lib/CMakeFiles/masslib.dir/crossLinkList.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/crossLinkList.cpp.o -c /build/buildd/massxpert-3.2.0/lib/crossLinkList.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 40%] Building CXX object gui/CMakeFiles/massxpert.dir/chemPadButton.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/chemPadButton.cpp.o -c /build/buildd/massxpert-3.2.0/gui/chemPadButton.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 40%] Building CXX object lib/CMakeFiles/masslib.dir/formula.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/formula.cpp.o -c /build/buildd/massxpert-3.2.0/lib/formula.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 28 [ 41%] Building CXX object gui/CMakeFiles/massxpert.dir/cleavageDlg.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/cleavageDlg.cpp.o -c /build/buildd/massxpert-3.2.0/gui/cleavageDlg.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 41%] Building CXX object lib/CMakeFiles/masslib.dir/fragmenter.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg 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&& /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/fragRule.cpp.o -c /build/buildd/massxpert-3.2.0/lib/fragRule.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 11 [ 43%] Building CXX object lib/CMakeFiles/masslib.dir/fragSpec.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/fragSpec.cpp.o -c /build/buildd/massxpert-3.2.0/lib/fragSpec.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 43%] Building CXX object gui/CMakeFiles/massxpert.dir/cleaveOligomerTableViewMimeData.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/cleaveOligomerTableViewMimeData.cpp.o -c /build/buildd/massxpert-3.2.0/gui/cleaveOligomerTableViewMimeData.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 43%] Building CXX object lib/CMakeFiles/masslib.dir/globals.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/globals.cpp.o -c 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-I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/isotope.cpp.o -c /build/buildd/massxpert-3.2.0/lib/isotope.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 45%] Building CXX object gui/CMakeFiles/massxpert.dir/cleaveOligomerTableViewSortProxyModel.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch 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-I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/modifSpec.cpp.o -c /build/buildd/massxpert-3.2.0/lib/modifSpec.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 30 [ 48%] Building CXX object gui/CMakeFiles/massxpert.dir/compositionsDlg.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o 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lib/CMakeFiles/masslib.dir/monomerDictionary.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/monomerDictionary.cpp.o -c /build/buildd/massxpert-3.2.0/lib/monomerDictionary.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 15 [ 49%] Building CXX object lib/CMakeFiles/masslib.dir/monomerSpec.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 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-O0 -o CMakeFiles/masslib.dir/oligomer.cpp.o -c /build/buildd/massxpert-3.2.0/lib/oligomer.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 49%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 49%] Building CXX object gui/CMakeFiles/massxpert.dir/compositionTreeViewItem.cpp.o Building CXX object lib/CMakeFiles/masslib.dir/oligomerList.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch/lib -I/build/buildd/massxpert-3.2.0/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o 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-I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/compositionTreeViewModel.cpp.o -c /build/buildd/massxpert-3.2.0/gui/compositionTreeViewModel.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 51%] Building CXX object lib/CMakeFiles/masslib.dir/peakShape.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/lib 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-I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/monomerDefDlg.cpp.o -c /build/buildd/massxpert-3.2.0/gui/monomerDefDlg.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 65%] Building CXX object gui/CMakeFiles/massxpert.dir/monomerModificationDlg.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/monomerModificationDlg.cpp.o -c /build/buildd/massxpert-3.2.0/gui/monomerModificationDlg.cpp /usr/bin/make -f plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build.make plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 2 [ 66%] Generating moc_massListSorterPlugin.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../../lib -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin/moc_massListSorterPlugin.cxx /build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/massListSorterPlugin.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 66%] Generating moc_massListSorterPluginDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../../lib -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin/moc_massListSorterPluginDlg.cxx /build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/massListSorterPluginDlg.hpp cd /build/buildd/massxpert-3.2.0/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.0 /build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin /build/buildd/massxpert-3.2.0/debian/build-arch /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/DependInfo.cmake --color= Scanning dependencies of target massListSorterPlugin make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/make -f plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build.make plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 66%] Building CXX object plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/massListSorterPlugin.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/c++ -DmassListSorterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/massListSorterPlugin.dir/massListSorterPlugin.cpp.o -c /build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/massListSorterPlugin.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 66%] Building CXX object plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/massListSorterPluginDlg.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/c++ -DmassListSorterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/massListSorterPlugin.dir/massListSorterPluginDlg.cpp.o -c /build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/massListSorterPluginDlg.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 39 [ 67%] Building CXX object gui/CMakeFiles/massxpert.dir/mzCalculationDlg.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/mzCalculationDlg.cpp.o -c /build/buildd/massxpert-3.2.0/gui/mzCalculationDlg.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 1 [ 68%] Building CXX object plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/moc_massListSorterPluginDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/c++ -DmassListSorterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/massListSorterPlugin.dir/moc_massListSorterPluginDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin/moc_massListSorterPluginDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 68%] Building CXX object plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/moc_massListSorterPlugin.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/c++ -DmassListSorterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/massListSorterPlugin.dir/moc_massListSorterPlugin.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin/moc_massListSorterPlugin.cxx Linking CXX shared module libmassListSorterPlugin.so cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/cmake -E cmake_link_script CMakeFiles/massListSorterPlugin.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o libmassListSorterPlugin.so CMakeFiles/massListSorterPlugin.dir/massListSorterPlugin.cpp.o CMakeFiles/massListSorterPlugin.dir/massListSorterPluginDlg.cpp.o CMakeFiles/massListSorterPlugin.dir/moc_massListSorterPluginDlg.cxx.o CMakeFiles/massListSorterPlugin.dir/moc_massListSorterPlugin.cxx.o -lQtSvg -lQtGui -lQtXml -lQtCore -lQtGui -lQtXml -lQtCore make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 1 2 [ 68%] Built target massListSorterPlugin /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 68%] Building CXX object gui/CMakeFiles/massxpert.dir/mzCalculationTreeView.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/mzCalculationTreeView.cpp.o -c /build/buildd/massxpert-3.2.0/gui/mzCalculationTreeView.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 68%] Building CXX object gui/CMakeFiles/massxpert.dir/mzCalculationTreeViewItem.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/mzCalculationTreeViewItem.cpp.o -c /build/buildd/massxpert-3.2.0/gui/mzCalculationTreeViewItem.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 40 [ 69%] Building CXX object gui/CMakeFiles/massxpert.dir/mzCalculationTreeViewModel.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/mzCalculationTreeViewModel.cpp.o -c /build/buildd/massxpert-3.2.0/gui/mzCalculationTreeViewModel.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 69%] Building CXX object gui/CMakeFiles/massxpert.dir/mzCalculationTreeViewSortProxyModel.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/mzCalculationTreeViewSortProxyModel.cpp.o -c /build/buildd/massxpert-3.2.0/gui/mzCalculationTreeViewSortProxyModel.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 69%] Building CXX object gui/CMakeFiles/massxpert.dir/mzLabInputOligomerTableView.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/mzLabInputOligomerTableView.cpp.o -c /build/buildd/massxpert-3.2.0/gui/mzLabInputOligomerTableView.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 41 [ 70%] Building CXX object gui/CMakeFiles/massxpert.dir/mzLabInputOligomerTableViewDlg.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/mzLabInputOligomerTableViewDlg.cpp.o -c /build/buildd/massxpert-3.2.0/gui/mzLabInputOligomerTableViewDlg.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 70%] Building CXX object gui/CMakeFiles/massxpert.dir/mzLabInputOligomerTableViewModel.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/mzLabInputOligomerTableViewModel.cpp.o -c /build/buildd/massxpert-3.2.0/gui/mzLabInputOligomerTableViewModel.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 70%] Building CXX object gui/CMakeFiles/massxpert.dir/mzLabInputOligomerTableViewSortProxyModel.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/mzLabInputOligomerTableViewSortProxyModel.cpp.o -c /build/buildd/massxpert-3.2.0/gui/mzLabInputOligomerTableViewSortProxyModel.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 42 [ 71%] Building CXX object gui/CMakeFiles/massxpert.dir/mzLabOutputOligomerTableView.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui 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cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_calculatorChemPadDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_calculatorChemPadDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 78%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_calculatorChemPadGroupBox.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_calculatorChemPadGroupBox.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_calculatorChemPadGroupBox.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 50 [ 79%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_calculatorRecorderDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 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-I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_calculatorWnd.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_calculatorWnd.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 79%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_chemPadButton.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_chemPadButton.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_chemPadButton.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 51 [ 80%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_cleavageDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_cleavageDlg.cxx.o -c 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-I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_compositionTreeView.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_compositionTreeView.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 82%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_compositionTreeViewModel.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_compositionTreeViewModel.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_compositionTreeViewModel.cxx /usr/bin/make -f plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build.make plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 100 [ 83%] Generating moc_seqToolsPlugin.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../../lib -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin/moc_seqToolsPlugin.cxx /build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/seqToolsPlugin.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 83%] Generating moc_seqToolsPluginDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../../lib -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin/moc_seqToolsPluginDlg.cxx /build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/seqToolsPluginDlg.hpp cd /build/buildd/massxpert-3.2.0/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.0 /build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin /build/buildd/massxpert-3.2.0/debian/build-arch /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/DependInfo.cmake --color= Scanning dependencies of target seqToolsPlugin make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/make -f plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build.make plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 98 [ 84%] Building CXX object plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/seqToolsPlugin.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/c++ -DseqToolsPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/seqToolsPlugin.dir/seqToolsPlugin.cpp.o -c /build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/seqToolsPlugin.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 84%] Building CXX object plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/seqToolsPluginDlg.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/c++ -DseqToolsPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/seqToolsPlugin.dir/seqToolsPluginDlg.cpp.o -c /build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/seqToolsPluginDlg.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 84%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_configurationSettingsDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_configurationSettingsDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_configurationSettingsDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 54 [ 85%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_crossLinkerDefDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_crossLinkerDefDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_crossLinkerDefDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 85%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_decimalPlacesOptionsDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_decimalPlacesOptionsDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_decimalPlacesOptionsDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 85%] Building CXX object plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/moc_seqToolsPluginDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/c++ -DseqToolsPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/seqToolsPlugin.dir/moc_seqToolsPluginDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin/moc_seqToolsPluginDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 99 [ 86%] Building CXX object plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/moc_seqToolsPlugin.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/c++ -DseqToolsPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/seqToolsPlugin.dir/moc_seqToolsPlugin.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin/moc_seqToolsPlugin.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 86%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_fragmentationDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_fragmentationDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_fragmentationDlg.cxx Linking CXX shared module libseqToolsPlugin.so cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/cmake -E cmake_link_script CMakeFiles/seqToolsPlugin.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o libseqToolsPlugin.so CMakeFiles/seqToolsPlugin.dir/seqToolsPlugin.cpp.o CMakeFiles/seqToolsPlugin.dir/seqToolsPluginDlg.cpp.o CMakeFiles/seqToolsPlugin.dir/moc_seqToolsPluginDlg.cxx.o CMakeFiles/seqToolsPlugin.dir/moc_seqToolsPlugin.cxx.o -lQtSvg -lQtGui -lQtXml -lQtCore -lQtGui -lQtXml -lQtCore make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 98 99 100 [ 86%] Built target seqToolsPlugin /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 55 [ 87%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_fragmentOligomerTableView.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_fragmentOligomerTableView.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_fragmentOligomerTableView.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 87%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_fragmentOligomerTableViewMimeData.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_fragmentOligomerTableViewMimeData.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_fragmentOligomerTableViewMimeData.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 56 [ 88%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_fragmentOligomerTableViewModel.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_fragmentOligomerTableViewModel.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_fragmentOligomerTableViewModel.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 88%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_fragSpecDefDlg.cxx.o /usr/bin/make -f plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build.make plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_fragSpecDefDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_fragSpecDefDlg.cxx [ 88%] Generating ui_NumeralsLocaleConverterPluginDlg.h cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/ui_NumeralsLocaleConverterPluginDlg.h /build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/ui/NumeralsLocaleConverterPluginDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 97 [ 89%] Generating moc_numeralsLocaleConverterPluginDlg.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../../lib -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/moc_numeralsLocaleConverterPluginDlg.cxx /build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/numeralsLocaleConverterPluginDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 89%] Generating moc_numeralsLocaleConverterPlugin.cxx cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../../lib -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/moc_numeralsLocaleConverterPlugin.cxx /build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/numeralsLocaleConverterPlugin.hpp cd /build/buildd/massxpert-3.2.0/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.0 /build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin /build/buildd/massxpert-3.2.0/debian/build-arch /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/DependInfo.cmake --color= Scanning dependencies of target numeralsLocaleConverterPlugin make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/make -f plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build.make plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 89%] Building CXX object plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/numeralsLocaleConverterPlugin.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/c++ -DnumeralsLocaleConverterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/numeralsLocaleConverterPlugin.dir/numeralsLocaleConverterPlugin.cpp.o -c /build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/numeralsLocaleConverterPlugin.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 89%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_mainWindow.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_mainWindow.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mainWindow.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 96 [ 90%] Building CXX object plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/numeralsLocaleConverterPluginDlg.cpp.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/c++ -DnumeralsLocaleConverterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/numeralsLocaleConverterPlugin.dir/numeralsLocaleConverterPluginDlg.cpp.o -c /build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/numeralsLocaleConverterPluginDlg.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 57 [ 91%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_massSearchDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_massSearchDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_massSearchDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 91%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_massSearchOligomerTableView.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_massSearchOligomerTableView.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_massSearchOligomerTableView.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 91%] Building CXX object plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/moc_numeralsLocaleConverterPluginDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/c++ -DnumeralsLocaleConverterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/numeralsLocaleConverterPlugin.dir/moc_numeralsLocaleConverterPluginDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/moc_numeralsLocaleConverterPluginDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 91%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_massSearchOligomerTableViewMimeData.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_massSearchOligomerTableViewMimeData.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_massSearchOligomerTableViewMimeData.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 91%] Building CXX object plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/moc_numeralsLocaleConverterPlugin.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/c++ -DnumeralsLocaleConverterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../.. -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../../gui -I/build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/numeralsLocaleConverterPlugin.dir/moc_numeralsLocaleConverterPlugin.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/moc_numeralsLocaleConverterPlugin.cxx Linking CXX shared module libnumeralsLocaleConverterPlugin.so cd /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/cmake -E cmake_link_script CMakeFiles/numeralsLocaleConverterPlugin.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o libnumeralsLocaleConverterPlugin.so CMakeFiles/numeralsLocaleConverterPlugin.dir/numeralsLocaleConverterPlugin.cpp.o CMakeFiles/numeralsLocaleConverterPlugin.dir/numeralsLocaleConverterPluginDlg.cpp.o CMakeFiles/numeralsLocaleConverterPlugin.dir/moc_numeralsLocaleConverterPluginDlg.cxx.o CMakeFiles/numeralsLocaleConverterPlugin.dir/moc_numeralsLocaleConverterPlugin.cxx.o -lQtSvg -lQtGui -lQtXml -lQtCore -lQtGui -lQtXml -lQtCore make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 96 97 [ 91%] Built target numeralsLocaleConverterPlugin /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 58 [ 92%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_massSearchOligomerTableViewModel.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_massSearchOligomerTableViewModel.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_massSearchOligomerTableViewModel.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 92%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_modifDefDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_modifDefDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_modifDefDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 92%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_monomerCodeEvaluator.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_monomerCodeEvaluator.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_monomerCodeEvaluator.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 59 [ 93%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_monomerCrossLinkDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_monomerCrossLinkDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_monomerCrossLinkDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 93%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_monomerDefDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_monomerDefDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_monomerDefDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 93%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_monomerModificationDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_monomerModificationDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_monomerModificationDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 60 [ 94%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_mzCalculationDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_mzCalculationDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzCalculationDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 94%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_mzCalculationTreeView.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_mzCalculationTreeView.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzCalculationTreeView.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 94%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_mzCalculationTreeViewModel.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_mzCalculationTreeViewModel.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzCalculationTreeViewModel.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 61 [ 95%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_mzLabInputOligomerTableView.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat 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-I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_mzLabInputOligomerTableViewDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzLabInputOligomerTableViewDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 95%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_mzLabInputOligomerTableViewModel.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_mzLabInputOligomerTableViewModel.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzLabInputOligomerTableViewModel.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 62 [ 96%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles Building CXX object gui/CMakeFiles/massxpert.dir/moc_mzLabOutputOligomerTableView.cxx.o [ 96%] cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_mzLabOutputOligomerTableView.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzLabOutputOligomerTableView.cxx Building CXX object gui/CMakeFiles/massxpert.dir/moc_mzLabOutputOligomerTableViewDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_mzLabOutputOligomerTableViewDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_mzLabOutputOligomerTableViewDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [ 96%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_mzLabOutputOligomerTableViewModel.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_mzLabOutputOligomerTableViewModel.cxx.o -c 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/build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_sequencePurificationDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 66 [100%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_spectrumCalculationDlg.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_spectrumCalculationDlg.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/moc_spectrumCalculationDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles [100%] Building CXX object gui/CMakeFiles/massxpert.dir/qrc_application.cxx.o cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.0/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch/gui -I/build/buildd/massxpert-3.2.0/debian/build-arch -I/build/buildd/massxpert-3.2.0/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/qrc_application.cxx.o -c /build/buildd/massxpert-3.2.0/debian/build-arch/gui/qrc_application.cxx Linking CXX executable massxpert cd /build/buildd/massxpert-3.2.0/debian/build-arch/gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/massxpert.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security -O2 -g -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/massxpert.dir/aboutDlg.cpp.o CMakeFiles/massxpert.dir/application.cpp.o CMakeFiles/massxpert.dir/atomDefDlg.cpp.o CMakeFiles/massxpert.dir/calculatorChemPadDlg.cpp.o CMakeFiles/massxpert.dir/calculatorChemPadGroupBox.cpp.o CMakeFiles/massxpert.dir/calculatorRecorderDlg.cpp.o CMakeFiles/massxpert.dir/calculatorWnd.cpp.o CMakeFiles/massxpert.dir/chemPadButton.cpp.o CMakeFiles/massxpert.dir/cleavageDlg.cpp.o CMakeFiles/massxpert.dir/cleaveOligomerTableView.cpp.o CMakeFiles/massxpert.dir/cleaveOligomerTableViewMimeData.cpp.o CMakeFiles/massxpert.dir/cleaveOligomerTableViewModel.cpp.o CMakeFiles/massxpert.dir/cleaveOligomerTableViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/cleaveSpecDefDlg.cpp.o CMakeFiles/massxpert.dir/compositionsDlg.cpp.o CMakeFiles/massxpert.dir/compositionTreeView.cpp.o CMakeFiles/massxpert.dir/compositionTreeViewItem.cpp.o CMakeFiles/massxpert.dir/compositionTreeViewModel.cpp.o CMakeFiles/massxpert.dir/compositionTreeViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/configurationSettingsDlg.cpp.o CMakeFiles/massxpert.dir/crossLinkerDefDlg.cpp.o CMakeFiles/massxpert.dir/decimalPlacesOptionsDlg.cpp.o CMakeFiles/massxpert.dir/fragmentationDlg.cpp.o CMakeFiles/massxpert.dir/fragmentOligomerTableView.cpp.o CMakeFiles/massxpert.dir/fragmentOligomerTableViewMimeData.cpp.o CMakeFiles/massxpert.dir/fragmentOligomerTableViewModel.cpp.o CMakeFiles/massxpert.dir/fragmentOligomerTableViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/fragSpecDefDlg.cpp.o CMakeFiles/massxpert.dir/main.cpp.o CMakeFiles/massxpert.dir/mainWindow.cpp.o CMakeFiles/massxpert.dir/massSearchDlg.cpp.o CMakeFiles/massxpert.dir/massSearchOligomerTableView.cpp.o CMakeFiles/massxpert.dir/massSearchOligomerTableViewMimeData.cpp.o CMakeFiles/massxpert.dir/massSearchOligomerTableViewModel.cpp.o CMakeFiles/massxpert.dir/massSearchOligomerTableViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/modifDefDlg.cpp.o CMakeFiles/massxpert.dir/monomerCodeEvaluator.cpp.o CMakeFiles/massxpert.dir/monomerCrossLinkDlg.cpp.o CMakeFiles/massxpert.dir/monomerDefDlg.cpp.o CMakeFiles/massxpert.dir/monomerModificationDlg.cpp.o CMakeFiles/massxpert.dir/mzCalculationDlg.cpp.o CMakeFiles/massxpert.dir/mzCalculationTreeView.cpp.o CMakeFiles/massxpert.dir/mzCalculationTreeViewItem.cpp.o CMakeFiles/massxpert.dir/mzCalculationTreeViewModel.cpp.o CMakeFiles/massxpert.dir/mzCalculationTreeViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/mzLabInputOligomerTableView.cpp.o CMakeFiles/massxpert.dir/mzLabInputOligomerTableViewDlg.cpp.o CMakeFiles/massxpert.dir/mzLabInputOligomerTableViewModel.cpp.o CMakeFiles/massxpert.dir/mzLabInputOligomerTableViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/mzLabOutputOligomerTableView.cpp.o CMakeFiles/massxpert.dir/mzLabOutputOligomerTableViewDlg.cpp.o CMakeFiles/massxpert.dir/mzLabOutputOligomerTableViewModel.cpp.o CMakeFiles/massxpert.dir/mzLabOutputOligomerTableViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/mzLabWnd.cpp.o CMakeFiles/massxpert.dir/pkaPhPiDlg.cpp.o CMakeFiles/massxpert.dir/polChemDefWnd.cpp.o CMakeFiles/massxpert.dir/polymerModificationDlg.cpp.o CMakeFiles/massxpert.dir/regionSelection.cpp.o CMakeFiles/massxpert.dir/sequenceEditorFindDlg.cpp.o CMakeFiles/massxpert.dir/sequenceEditorGraphicsView.cpp.o CMakeFiles/massxpert.dir/sequenceEditorGraphicsViewKeyboardHandling.cpp.o CMakeFiles/massxpert.dir/sequenceEditorGraphicsViewKeySequenceHandling.cpp.o CMakeFiles/massxpert.dir/sequenceEditorWnd.cpp.o CMakeFiles/massxpert.dir/sequenceImportDlg.cpp.o CMakeFiles/massxpert.dir/sequencePurificationDlg.cpp.o CMakeFiles/massxpert.dir/sequenceSelection.cpp.o CMakeFiles/massxpert.dir/spectrumCalculationDlg.cpp.o CMakeFiles/massxpert.dir/moc_aboutDlg.cxx.o CMakeFiles/massxpert.dir/moc_application.cxx.o CMakeFiles/massxpert.dir/moc_atomDefDlg.cxx.o CMakeFiles/massxpert.dir/moc_calculatorChemPadDlg.cxx.o CMakeFiles/massxpert.dir/moc_calculatorChemPadGroupBox.cxx.o CMakeFiles/massxpert.dir/moc_calculatorRecorderDlg.cxx.o CMakeFiles/massxpert.dir/moc_calculatorWnd.cxx.o CMakeFiles/massxpert.dir/moc_chemPadButton.cxx.o CMakeFiles/massxpert.dir/moc_cleavageDlg.cxx.o CMakeFiles/massxpert.dir/moc_cleaveOligomerTableView.cxx.o CMakeFiles/massxpert.dir/moc_cleaveOligomerTableViewMimeData.cxx.o CMakeFiles/massxpert.dir/moc_cleaveOligomerTableViewModel.cxx.o CMakeFiles/massxpert.dir/moc_cleaveSpecDefDlg.cxx.o CMakeFiles/massxpert.dir/moc_compositionsDlg.cxx.o CMakeFiles/massxpert.dir/moc_compositionTreeView.cxx.o CMakeFiles/massxpert.dir/moc_compositionTreeViewModel.cxx.o CMakeFiles/massxpert.dir/moc_configurationSettingsDlg.cxx.o CMakeFiles/massxpert.dir/moc_crossLinkerDefDlg.cxx.o CMakeFiles/massxpert.dir/moc_decimalPlacesOptionsDlg.cxx.o CMakeFiles/massxpert.dir/moc_fragmentationDlg.cxx.o CMakeFiles/massxpert.dir/moc_fragmentOligomerTableView.cxx.o CMakeFiles/massxpert.dir/moc_fragmentOligomerTableViewMimeData.cxx.o CMakeFiles/massxpert.dir/moc_fragmentOligomerTableViewModel.cxx.o CMakeFiles/massxpert.dir/moc_fragSpecDefDlg.cxx.o CMakeFiles/massxpert.dir/moc_mainWindow.cxx.o CMakeFiles/massxpert.dir/moc_massSearchDlg.cxx.o CMakeFiles/massxpert.dir/moc_massSearchOligomerTableView.cxx.o CMakeFiles/massxpert.dir/moc_massSearchOligomerTableViewMimeData.cxx.o CMakeFiles/massxpert.dir/moc_massSearchOligomerTableViewModel.cxx.o CMakeFiles/massxpert.dir/moc_modifDefDlg.cxx.o CMakeFiles/massxpert.dir/moc_monomerCodeEvaluator.cxx.o CMakeFiles/massxpert.dir/moc_monomerCrossLinkDlg.cxx.o CMakeFiles/massxpert.dir/moc_monomerDefDlg.cxx.o CMakeFiles/massxpert.dir/moc_monomerModificationDlg.cxx.o CMakeFiles/massxpert.dir/moc_mzCalculationDlg.cxx.o CMakeFiles/massxpert.dir/moc_mzCalculationTreeView.cxx.o CMakeFiles/massxpert.dir/moc_mzCalculationTreeViewModel.cxx.o CMakeFiles/massxpert.dir/moc_mzLabInputOligomerTableView.cxx.o CMakeFiles/massxpert.dir/moc_mzLabInputOligomerTableViewDlg.cxx.o CMakeFiles/massxpert.dir/moc_mzLabInputOligomerTableViewModel.cxx.o CMakeFiles/massxpert.dir/moc_mzLabOutputOligomerTableView.cxx.o CMakeFiles/massxpert.dir/moc_mzLabOutputOligomerTableViewDlg.cxx.o CMakeFiles/massxpert.dir/moc_mzLabOutputOligomerTableViewModel.cxx.o CMakeFiles/massxpert.dir/moc_mzLabWnd.cxx.o CMakeFiles/massxpert.dir/moc_pkaPhPiDlg.cxx.o CMakeFiles/massxpert.dir/moc_polChemDefWnd.cxx.o CMakeFiles/massxpert.dir/moc_polymerModificationDlg.cxx.o CMakeFiles/massxpert.dir/moc_sequenceEditorFindDlg.cxx.o CMakeFiles/massxpert.dir/moc_sequenceEditorGraphicsView.cxx.o CMakeFiles/massxpert.dir/moc_sequenceEditorWnd.cxx.o CMakeFiles/massxpert.dir/moc_sequenceImportDlg.cxx.o CMakeFiles/massxpert.dir/moc_sequencePurificationDlg.cxx.o CMakeFiles/massxpert.dir/moc_spectrumCalculationDlg.cxx.o CMakeFiles/massxpert.dir/qrc_application.cxx.o -o massxpert -rdynamic -Wl,-whole-archive ../lib/libmasslib.a -Wl,-no-whole-archive -lQtSvg -lQtGui -lQtXml -lQtCore -lQtXml -lQtSvg -lQtGui -lQtCore make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 [100%] Built target massxpert make[2]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_start /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 0 make[1]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' touch build-arch-stamp /usr/bin/fakeroot debian/rules binary-arch "---------------------------------------" NUMJOBS: 2 MAKEFLAGS: -j2 DEB_BUILD_OPTIONS: parallel=2 "---------------------------------------" dh_testdir dh_testroot dh_installdirs -a install -d debian/massxpert install -d debian/massxpert/usr/bin debian/massxpert/usr/lib install -d debian/massxpert-dbg mkdir -p /build/buildd/massxpert-3.2.0/debian/tmp-arch /usr/bin/make -C /build/buildd/massxpert-3.2.0/debian/build-arch install DESTDIR=/build/buildd/massxpert-3.2.0/debian/tmp-arch make[1]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -H/build/buildd/massxpert-3.2.0 -B/build/buildd/massxpert-3.2.0/debian/build-arch --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/make -f lib/CMakeFiles/masslib.dir/build.make lib/CMakeFiles/masslib.dir/depend /usr/bin/make -f gui/CMakeFiles/massxpert.dir/build.make gui/CMakeFiles/massxpert.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' cd /build/buildd/massxpert-3.2.0/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.0 /build/buildd/massxpert-3.2.0/lib /build/buildd/massxpert-3.2.0/debian/build-arch /build/buildd/massxpert-3.2.0/debian/build-arch/lib /build/buildd/massxpert-3.2.0/debian/build-arch/lib/CMakeFiles/masslib.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/make -f lib/CMakeFiles/masslib.dir/build.make lib/CMakeFiles/masslib.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' make[3]: Nothing to be done for `lib/CMakeFiles/masslib.dir/build'. make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 [ 23%] Built target masslib /usr/bin/make -f plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build.make plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' cd /build/buildd/massxpert-3.2.0/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.0 /build/buildd/massxpert-3.2.0/plugins-src/massListSorterPlugin /build/buildd/massxpert-3.2.0/debian/build-arch /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/make -f plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build.make plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' make[3]: Nothing to be done for `plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build'. make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 1 2 [ 25%] Built target massListSorterPlugin /usr/bin/make -f plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build.make plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' cd /build/buildd/massxpert-3.2.0/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.0 /build/buildd/massxpert-3.2.0/plugins-src/seqToolsPlugin /build/buildd/massxpert-3.2.0/debian/build-arch /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/make -f plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build.make plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' cd /build/buildd/massxpert-3.2.0/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.0 /build/buildd/massxpert-3.2.0/gui /build/buildd/massxpert-3.2.0/debian/build-arch /build/buildd/massxpert-3.2.0/debian/build-arch/gui /build/buildd/massxpert-3.2.0/debian/build-arch/gui/CMakeFiles/massxpert.dir/DependInfo.cmake --color= make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' make[3]: Nothing to be done for `plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build'. make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 98 99 100 [ 28%] Built target seqToolsPlugin /usr/bin/make -f plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build.make plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' cd /build/buildd/massxpert-3.2.0/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.0 /build/buildd/massxpert-3.2.0/plugins-src/numeralsLocaleConverterPlugin /build/buildd/massxpert-3.2.0/debian/build-arch /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin /build/buildd/massxpert-3.2.0/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/make -f plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build.make plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' make[3]: Nothing to be done for `plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build'. make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 96 97 [ 30%] Built target numeralsLocaleConverterPlugin make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/make -f gui/CMakeFiles/massxpert.dir/build.make gui/CMakeFiles/massxpert.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' make[3]: Nothing to be done for `gui/CMakeFiles/massxpert.dir/build'. make[3]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 [100%] Built target massxpert make[2]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' /usr/bin/cmake -E cmake_progress_start /build/buildd/massxpert-3.2.0/debian/build-arch/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory `/build/buildd/massxpert-3.2.0/debian/build-arch' make[2]: Nothing to be done for `preinstall'. make[2]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "debug" -- Installing: /build/buildd/massxpert-3.2.0/debian/tmp-arch/usr/share/doc/massxpert/COPYING -- Installing: /build/buildd/massxpert-3.2.0/debian/tmp-arch/usr/share/applications/massxpert.desktop -- Installing: /build/buildd/massxpert-3.2.0/debian/tmp-arch/usr/share/man/man1/massxpert.1 -- Installing: /build/buildd/massxpert-3.2.0/debian/tmp-arch/usr/bin/massxpert -- Installing: /build/buildd/massxpert-3.2.0/debian/tmp-arch/usr/lib/massxpert/plugins/libmassListSorterPlugin.so -- Installing: /build/buildd/massxpert-3.2.0/debian/tmp-arch/usr/lib/massxpert/plugins/libseqToolsPlugin.so -- Installing: /build/buildd/massxpert-3.2.0/debian/tmp-arch/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so -- Installing: /build/buildd/massxpert-3.2.0/debian/tmp-arch/usr/share/massxpert/locales/massxpert_fr.qm make[1]: Leaving directory `/build/buildd/massxpert-3.2.0/debian/build-arch' install -o root -g root -d /build/buildd/massxpert-3.2.0/debian/tmp-arch/usr/share/pixmaps install -o root -g root -m 644 \ /build/buildd/massxpert-3.2.0/gui/images/massxpert-icon-32.xpm \ /build/buildd/massxpert-3.2.0/debian/tmp-arch/usr/share/pixmaps/massxpert-icon-32.xpm rm /build/buildd/massxpert-3.2.0/debian/tmp-arch/usr/share/doc/massxpert/COPYING touch install-arch-stamp dh_testdir -a dh_testroot -a dh_installchangelogs -a install -d debian/massxpert/usr/share/doc/massxpert install -o 0 -g 0 -p -m644 debian/changelog debian/massxpert/usr/share/doc/massxpert/changelog.Debian install -d debian/massxpert-dbg/usr/share/doc/massxpert-dbg install -o 0 -g 0 -p -m644 debian/changelog debian/massxpert-dbg/usr/share/doc/massxpert-dbg/changelog.Debian dh_installdocs -a install -g 0 -o 0 -m 644 -p debian/copyright debian/massxpert/usr/share/doc/massxpert/copyright install -g 0 -o 0 -m 644 -p debian/copyright debian/massxpert-dbg/usr/share/doc/massxpert-dbg/copyright # Same doc directory for changelog.Debian.gz and copyright files # in both massxpert and massxpert-dbg dh_link usr/share/doc/massxpert usr/share/doc/massxpert-dbg rm -f debian/massxpert/usr/share/doc/massxpert-dbg ln -sf massxpert debian/massxpert/usr/share/doc/massxpert-dbg dh_install -a cp -a ./debian/tmp-arch/usr/bin/massxpert debian/massxpert/usr/bin/ cp -a ./debian/tmp-arch/usr/lib/massxpert debian/massxpert/usr/lib/ install -d debian/massxpert/usr/share/pixmaps cp -a ./debian/tmp-arch/usr/share/pixmaps/massxpert-icon-32.xpm debian/massxpert/usr/share/pixmaps/ install -d debian/massxpert/usr/share/applications cp -a ./debian/tmp-arch/usr/share/applications/massxpert.desktop debian/massxpert/usr/share/applications/ install -d debian/massxpert/usr/share/massxpert/locales cp -a ./debian/tmp-arch/usr/share/massxpert/locales/massxpert_fr.qm debian/massxpert/usr/share/massxpert/locales/ dh_installmenu -a install -d debian/massxpert/usr/share/menu install -p -m644 debian/massxpert.menu debian/massxpert/usr/share/menu/massxpert echo "# Automatically added by dh_installmenu">> debian/massxpert.postinst.debhelper sed "" /usr/share/debhelper/autoscripts/postinst-menu >> debian/massxpert.postinst.debhelper echo '# End automatically added section' >> debian/massxpert.postinst.debhelper echo "# Automatically added by dh_installmenu">> debian/massxpert.postrm.debhelper sed "" /usr/share/debhelper/autoscripts/postrm-menu >> debian/massxpert.postrm.debhelper echo '# End automatically added section' >> debian/massxpert.postrm.debhelper dh_installman -a install -d debian/massxpert/usr/share/man/man1/ install -p -m644 debian/tmp-arch/usr/share/man/man1/massxpert.1 debian/massxpert/usr/share/man/man1/massxpert.1 man --recode UTF-8 ./massxpert\.1 > massxpert\.1\.new chmod 644 massxpert.1.new mv -f massxpert.1.new massxpert.1 dh_strip --dbg-package=massxpert-dbg -a dh_strip debug symbol extraction: all non-arch-all packages for this build platform amd64: massxpert massxpert-dbg dh_strip debug symbol extraction: not adding gnu debuglinks since --dbg-package is given dh_strip debug symbol extraction: packages to act on: massxpert massxpert-dbg dh_strip debug symbol extraction: ignored packages: dpkg-deb: building package `massxpert-dbgsym' in `../massxpert-dbgsym_3.2.0-2_amd64.ddeb'. install -d debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins objcopy --only-keep-debug debian/massxpert/usr/lib/massxpert/plugins/libmassListSorterPlugin.so debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libmassListSorterPlugin.so chmod 644 debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libmassListSorterPlugin.so strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/massxpert/usr/lib/massxpert/plugins/libmassListSorterPlugin.so objcopy --add-gnu-debuglink debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libmassListSorterPlugin.so debian/massxpert/usr/lib/massxpert/plugins/libmassListSorterPlugin.so objcopy --only-keep-debug debian/massxpert/usr/lib/massxpert/plugins/libseqToolsPlugin.so debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libseqToolsPlugin.so chmod 644 debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libseqToolsPlugin.so strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/massxpert/usr/lib/massxpert/plugins/libseqToolsPlugin.so objcopy --add-gnu-debuglink debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libseqToolsPlugin.so debian/massxpert/usr/lib/massxpert/plugins/libseqToolsPlugin.so objcopy --only-keep-debug debian/massxpert/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so chmod 644 debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/massxpert/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so objcopy --add-gnu-debuglink debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so debian/massxpert/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so install -d debian/massxpert-dbg/usr/lib/debug//usr/bin objcopy --only-keep-debug debian/massxpert/usr/bin/massxpert debian/massxpert-dbg/usr/lib/debug//usr/bin/massxpert chmod 644 debian/massxpert-dbg/usr/lib/debug//usr/bin/massxpert strip --remove-section=.comment --remove-section=.note debian/massxpert/usr/bin/massxpert objcopy --add-gnu-debuglink debian/massxpert-dbg/usr/lib/debug//usr/bin/massxpert debian/massxpert/usr/bin/massxpert dh_compress -a cd debian/massxpert chmod a-x usr/share/man/man1/massxpert.1 usr/share/doc/massxpert/changelog.Debian gzip -9nf usr/share/man/man1/massxpert.1 usr/share/doc/massxpert/changelog.Debian cd '/build/buildd/massxpert-3.2.0' cd debian/massxpert-dbg chmod a-x usr/share/doc/massxpert-dbg/changelog.Debian gzip -9nf usr/share/doc/massxpert-dbg/changelog.Debian cd '/build/buildd/massxpert-3.2.0' dh_fixperms -a find debian/massxpert -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/massxpert ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/massxpert/usr/share/doc -type f ! -regex 'debian/massxpert/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert/usr/share/doc -type d -print0 2>/dev/null | xargs -0r chmod 755 find debian/massxpert/usr/share/man debian/massxpert/usr/man/ debian/massxpert/usr/X11*/man/ -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert -perm -5 -type f \( -name '*.so.*' -or -name '*.so' -or -name '*.la' -or -name '*.a' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert/usr/include -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert/usr/share/applications -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert -perm -5 -type f \( -name '*.cmxs' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert/usr/lib/perl5 debian/massxpert/usr/share/perl5 -type f -perm -5 -name '*.pm' -print0 2>/dev/null | xargs -0r chmod a-X find debian/massxpert/usr/bin -type f -print0 2>/dev/null | xargs -0r chmod a+x find debian/massxpert/usr/lib -type f -name '*.ali' -print0 2>/dev/null | xargs -0r chmod uga-w find debian/massxpert-dbg -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/massxpert-dbg ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/massxpert-dbg/usr/share/doc -type f ! -regex 'debian/massxpert-dbg/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert-dbg/usr/share/doc -type d -print0 2>/dev/null | xargs -0r chmod 755 find debian/massxpert-dbg/usr/share/man debian/massxpert-dbg/usr/man/ debian/massxpert-dbg/usr/X11*/man/ -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert-dbg -perm -5 -type f \( -name '*.so.*' -or -name '*.so' -or -name '*.la' -or -name '*.a' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert-dbg/usr/include -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert-dbg/usr/share/applications -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert-dbg -perm -5 -type f \( -name '*.cmxs' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert-dbg/usr/lib/perl5 debian/massxpert-dbg/usr/share/perl5 -type f -perm -5 -name '*.pm' -print0 2>/dev/null | xargs -0r chmod a-X find debian/massxpert-dbg/usr/lib -type f -name '*.ali' -print0 2>/dev/null | xargs -0r chmod uga-w dh_installdeb -a install -o 0 -g 0 -d debian/massxpert/DEBIAN printf '#!/bin/sh set -e ' > debian/massxpert/DEBIAN/postinst cat debian/massxpert.postinst.debhelper >> debian/massxpert/DEBIAN/postinst chown 0:0 debian/massxpert/DEBIAN/postinst chmod 755 debian/massxpert/DEBIAN/postinst printf '#!/bin/sh set -e ' > debian/massxpert/DEBIAN/postrm cat debian/massxpert.postrm.debhelper >> debian/massxpert/DEBIAN/postrm chown 0:0 debian/massxpert/DEBIAN/postrm chmod 755 debian/massxpert/DEBIAN/postrm install -o 0 -g 0 -d debian/massxpert-dbg/DEBIAN dh_shlibdeps -a dpkg-shlibdeps -Tdebian/massxpert.substvars debian/massxpert/usr/bin/massxpert debian/massxpert/usr/lib/massxpert/plugins/libmassListSorterPlugin.so debian/massxpert/usr/lib/massxpert/plugins/libseqToolsPlugin.so debian/massxpert/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so dh_gencontrol -a echo misc:Depends= >> debian/massxpert.substvars dpkg-gencontrol -pmassxpert -ldebian/changelog -Tdebian/massxpert.substvars -Pdebian/massxpert chmod 644 debian/massxpert/DEBIAN/control chown 0:0 debian/massxpert/DEBIAN/control echo misc:Depends= >> debian/massxpert-dbg.substvars dpkg-gencontrol -pmassxpert-dbg -ldebian/changelog -Tdebian/massxpert-dbg.substvars -Pdebian/massxpert-dbg chmod 644 debian/massxpert-dbg/DEBIAN/control chown 0:0 debian/massxpert-dbg/DEBIAN/control dh_md5sums -a (cd debian/massxpert >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null chmod 644 debian/massxpert/DEBIAN/md5sums chown 0:0 debian/massxpert/DEBIAN/md5sums (cd debian/massxpert-dbg >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null chmod 644 debian/massxpert-dbg/DEBIAN/md5sums chown 0:0 debian/massxpert-dbg/DEBIAN/md5sums dh_builddeb -a dpkg-deb --build debian/massxpert .. INFO: pkgstriptranslations version 110 pkgstriptranslations: processing massxpert (in debian/massxpert); do_strip: , oemstrip: debian/massxpert/usr/share/applications/massxpert.desktop: does not have gettext domain, not stripping pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/massxpert/DEBIAN/control, package massxpert, directory debian/massxpert pkgstripfiles: Truncating usr/share/doc/massxpert/changelog.Debian.gz to topmost ten records pkgstripfiles: PNG optimization for package massxpert took 0 s dpkg-deb: warning: 'debian/massxpert/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `massxpert' in `../massxpert_3.2.0-2_amd64.deb'. dpkg-deb --build debian/massxpert-dbg .. INFO: pkgstriptranslations version 110 pkgstriptranslations: processing massxpert-dbg (in debian/massxpert-dbg); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/massxpert-dbg/DEBIAN/control, package massxpert-dbg, directory debian/massxpert-dbg Searching for duplicated docs in dependency massxpert... symlinking changelog.Debian.gz in massxpert-dbg to file in massxpert pkgstripfiles: PNG optimization for package massxpert-dbg took 0 s dpkg-deb: warning: 'debian/massxpert-dbg/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `massxpert-dbg' in `../massxpert-dbg_3.2.0-2_amd64.deb'. dpkg-genchanges -B -mUbuntu/amd64 Build Daemon >../massxpert_3.2.0-2_amd64.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build massxpert-3.2.0 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20111212-1826 Publishing debug debs. chroot-autobuild/build/buildd/massxpert_3.2.0-2_amd64.deb: new debian package, version 2.0. size 1106656 bytes: control archive= 1488 bytes. 1356 bytes, 30 lines control 816 bytes, 11 lines md5sums 185 bytes, 7 lines * postinst #!/bin/sh 160 bytes, 5 lines * postrm #!/bin/sh Package: massxpert Version: 3.2.0-2 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: The Debichem Group Installed-Size: 3213 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libqt4-svg (>= 4:4.5.3), libqt4-xml (>= 4:4.5.3), libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.6.1), libstdc++6 (>= 4.1.1), massxpert-data (>= 3.2.0), massxpert-data (<< 3.2.0A~) Suggests: massxpert-doc Conflicts: massxpert-bin Replaces: massxpert-bin Section: science Priority: optional Homepage: http://www.massxpert.org Description: linear polymer mass spectrometry software massXpert is a program to simulate and analyse mass spectrometric data obtained on linear (bio-)polymers. It is the successor of GNU polyxmass. . Four modules allow: - making brand new polymer chemistry definitions; - using the definitions to perform easy calculations in a desktop calculator-like manner; - performing sophisticated polymer sequence editing and simulations; - perform m/z list comparisons; . Chemical simulations encompass cleavage (either chemical or enzymatic), gas-phase fragmentations, chemical modification of any monomer in the polymer sequence, cross-linking of monomers in the sequence, arbitrary mass searches, calculation of the isotopic pattern... chroot-autobuild/build/buildd/massxpert-dbg_3.2.0-2_amd64.deb: new debian package, version 2.0. size 12613532 bytes: control archive= 1034 bytes. 1185 bytes, 30 lines control 444 bytes, 5 lines md5sums Package: massxpert-dbg Source: massxpert Version: 3.2.0-2 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: The Debichem Group Installed-Size: 30157 Depends: massxpert (= 3.2.0-2) Section: debug Priority: extra Homepage: http://www.massxpert.org Description: linear polymer mass spectrometry software - debugging symbols massXpert is a program to simulate and analyse mass spectrometric data obtained on linear (bio-)polymers. It is the successor of GNU polyxmass. . Four modules allow: - making brand new polymer chemistry definitions; - using the definitions to perform easy calculations in a desktop calculator-like manner; - performing sophisticated polymer sequence editing and simulations; - perform m/z list comparisons; . Chemical simulations encompass cleavage (either chemical or enzymatic), gas-phase fragmentations, chemical modification of any monomer in the polymer sequence, cross-linking of monomers in the sequence, arbitrary mass searches, calculation of the isotopic pattern... . This package provides the debugging symbols for massxpert. chroot-autobuild/build/buildd/massxpert_3.2.0-2_amd64.deb: drwxr-xr-x root/root 0 2011-12-12 18:25 ./ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/bin/ -rwxr-xr-x root/root 2881560 2011-12-12 18:25 ./usr/bin/massxpert drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/lib/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/lib/massxpert/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/lib/massxpert/plugins/ -rw-r--r-- root/root 31232 2011-12-12 18:25 ./usr/lib/massxpert/plugins/libmassListSorterPlugin.so -rw-r--r-- root/root 47944 2011-12-12 18:25 ./usr/lib/massxpert/plugins/libseqToolsPlugin.so -rw-r--r-- root/root 35424 2011-12-12 18:25 ./usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/share/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/share/doc/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/share/doc/massxpert/ -rw-r--r-- root/root 1060 2011-11-24 17:12 ./usr/share/doc/massxpert/copyright -rw-r--r-- root/root 1767 2011-12-12 18:26 ./usr/share/doc/massxpert/changelog.Debian.gz drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/share/pixmaps/ -rw-r--r-- root/root 12417 2011-12-12 18:25 ./usr/share/pixmaps/massxpert-icon-32.xpm drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/share/applications/ -rw-r--r-- root/root 386 2011-10-22 19:50 ./usr/share/applications/massxpert.desktop drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/share/massxpert/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/share/massxpert/locales/ -rw-r--r-- root/root 198171 2011-10-22 19:50 ./usr/share/massxpert/locales/massxpert_fr.qm drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/share/menu/ -rw-r--r-- root/root 257 2011-11-24 17:12 ./usr/share/menu/massxpert drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/share/man/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/share/man/man1/ -rw-r--r-- root/root 1115 2011-12-12 18:25 ./usr/share/man/man1/massxpert.1.gz lrwxrwxrwx root/root 0 2011-12-12 18:25 ./usr/share/doc/massxpert-dbg -> massxpert chroot-autobuild/build/buildd/massxpert-dbg_3.2.0-2_amd64.deb: drwxr-xr-x root/root 0 2011-12-12 18:25 ./ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/share/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/share/doc/ drwxr-xr-x root/root 0 2011-12-12 18:26 ./usr/share/doc/massxpert-dbg/ -rw-r--r-- root/root 1060 2011-11-24 17:12 ./usr/share/doc/massxpert-dbg/copyright drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/lib/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/lib/debug/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/lib/debug/usr/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/lib/debug/usr/lib/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/lib/debug/usr/lib/massxpert/ drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/lib/debug/usr/lib/massxpert/plugins/ -rw-r--r-- root/root 675506 2011-12-12 18:25 ./usr/lib/debug/usr/lib/massxpert/plugins/libmassListSorterPlugin.so -rw-r--r-- root/root 790640 2011-12-12 18:25 ./usr/lib/debug/usr/lib/massxpert/plugins/libseqToolsPlugin.so -rw-r--r-- root/root 801697 2011-12-12 18:25 ./usr/lib/debug/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so drwxr-xr-x root/root 0 2011-12-12 18:25 ./usr/lib/debug/usr/bin/ -rw-r--r-- root/root 28547920 2011-12-12 18:25 ./usr/lib/debug/usr/bin/massxpert lrwxrwxrwx root/root 0 2011-12-12 18:26 ./usr/share/doc/massxpert-dbg/changelog.Debian.gz -> ../massxpert/changelog.Debian.gz massxpert_3.2.0-2_amd64.changes: Format: 1.8 Date: Thu, 24 Nov 2011 13:42:48 +0100 Source: massxpert Binary: massxpert massxpert-dbg massxpert-data massxpert-doc Architecture: amd64 Version: 3.2.0-2 Distribution: precise Urgency: low Maintainer: Ubuntu/amd64 Build Daemon Changed-By: Filippo Rusconi Description: massxpert - linear polymer mass spectrometry software massxpert-data - linear polymer mass spectrometry software - arch-indep data massxpert-dbg - linear polymer mass spectrometry software - debugging symbols massxpert-doc - Linear polymer mass spectrometry software - manual Changes: massxpert (3.2.0-2) unstable; urgency=low . * debian/control: configure packaging for debug symbols (new massxpert-dbg binary package added). Checksums-Sha1: 278bd2d21f3b788d77823dae59891132ad3ec1c3 1106656 massxpert_3.2.0-2_amd64.deb bc0a14ce34f8f77828ddeb2982cc70163147dd93 12613532 massxpert-dbg_3.2.0-2_amd64.deb Checksums-Sha256: 95fa1f65332f3ef9b9b3a27c70bbf47b9cc8cef16be3dd6af62c70ef1e42bfbf 1106656 massxpert_3.2.0-2_amd64.deb d2166cad42a79b1f708ac101c0d5e871fed1a040c379b9c60a824ce0b7a514e7 12613532 massxpert-dbg_3.2.0-2_amd64.deb Files: 681a37e9f019dc77ccdf68efd036bd3c 1106656 science optional massxpert_3.2.0-2_amd64.deb 1daf550cbda13e79d57338ec9312024a 12613532 debug extra massxpert-dbg_3.2.0-2_amd64.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/massxpert-3.2.0 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --purge libxmu6 groff-base libx11-data libxdmcp-dev fontconfig-config ttf-dejavu-core gettext file libxaw7 libqt4-sql libqt4-help fontconfig libxpm4 libqtgui4 texlive-common x11-common libqt4-qt3support libx11-dev libcroco3 libxi6 libgettextpo0 libfreetype6 texlive-latex-recommended libxcb1 x11proto-input-dev tex-common libcurl3 html2text libqtcore4 debhelper libfontconfig1 libpthread-stubs0 libqt4-xmlpatterns libqt4-script libmagic1 libtiff4 libexpat1 qt4-qmake bsdmainutils libxau6 texlive-fonts-recommended libx11-6 xtrans-dev xorg-sgml-doctools mime-support x11proto-core-dev libxmlrpc-core-c3 libpoppler19 libqt4-dbus libxcb1-dev libxt6 libqt4-dev libmng1 libxdmcp6 qt4-linguist-tools texlive-base libkpathsea5 texlive-doc-base qdbus po-debconf libqt4-xml emacsen-common libpaper1 libxml2 cmake-data libjpeg8 liblcms1 ed libpaper-utils man-db cmake libice6 x11proto-kb-dev intltool-debian libqt4-svg libxrender1 luatex texlive-latex-base libpthread-stubs0-dev ucf libxau-dev gettext-base libqt4-declarative libqt4-network libqt4-designer libarchive1 libqt4-scripttools libunistring0 libqt4-test libsm6 libpipeline1 libxext6 texlive-binaries libaudio2 (Reading database ... 28496 files and directories currently installed.) Removing texlive-latex-recommended ... Purging configuration files for texlive-latex-recommended ... Removing debhelper ... Removing texlive-fonts-recommended ... Purging configuration files for texlive-fonts-recommended ... Removing libqt4-dev ... Removing qt4-linguist-tools ... Removing man-db ... Purging configuration files for man-db ... Removing catpages as well as /var/cache/man hierarchy. Removing cmake ... Removing libqt4-svg ... Purging configuration files for libqt4-svg ... Removing texlive-latex-base ... Purging configuration files for texlive-latex-base ... Removing libarchive1 ... Purging configuration files for libarchive1 ... Removing libqt4-scripttools ... Purging configuration files for libqt4-scripttools ... Removing libqt4-test ... Purging configuration files for libqt4-test ... Removing libpipeline1 ... Purging configuration files for libpipeline1 ... Removing groff-base ... Purging configuration files for groff-base ... Removing file ... Removing libqt4-help ... 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Processing triggers for libc-bin ... ldconfig deferred processing now taking place ****************************************************************************** Finished at 20111212-1829 Build needed 00:05:58, 299224k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '36ca17381ea33caa28d007ffe6fe67556c9824ad'] Scanning for processes to kill in build /home/buildd/build-36ca17381ea33caa28d007ffe6fe67556c9824ad/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '36ca17381ea33caa28d007ffe6fe67556c9824ad'] Unmounting chroot for build 36ca17381ea33caa28d007ffe6fe67556c9824ad... none /home/buildd/build-36ca17381ea33caa28d007ffe6fe67556c9824ad/chroot-autobuild/proc proc rw,relatime 0 0 none /home/buildd/build-36ca17381ea33caa28d007ffe6fe67556c9824ad/chroot-autobuild/dev/pts devpts rw,relatime 0 0 none /home/buildd/build-36ca17381ea33caa28d007ffe6fe67556c9824ad/chroot-autobuild/sys sysfs rw,relatime 0 0 none /home/buildd/build-36ca17381ea33caa28d007ffe6fe67556c9824ad/chroot-autobuild/dev/shm tmpfs rw,relatime 0 0 RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '36ca17381ea33caa28d007ffe6fe67556c9824ad'] Removing build 36ca17381ea33caa28d007ffe6fe67556c9824ad