RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: 2.6.24-29-server #1 SMP Tue Oct 11 15:57:27 UTC 2011 x86_64 Buildd toolchain package versions: launchpad-buildd_113~0.IS.08.04 python-lpbuildd_113~0.IS.08.04 bzr_2.4.0-0ubuntu2~11.IS.8.04. Syncing the system clock with the buildd NTP service... 25 May 07:28:32 ntpdate[17783]: adjust time server 10.122.37.1 offset 0.000005 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '137e9d3897d3b955d376c31057ce25ceeb2f155e', '/home/buildd/filecache-default/0cd6f49524ddce4d01615e8f872d7971c9b746aa'] Unpacking chroot for build 137e9d3897d3b955d376c31057ce25ceeb2f155e RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '137e9d3897d3b955d376c31057ce25ceeb2f155e'] Mounting chroot for build 137e9d3897d3b955d376c31057ce25ceeb2f155e RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '137e9d3897d3b955d376c31057ce25ceeb2f155e', 'deb http://ftpmaster.internal/ubuntu quantal main universe'] Overriding sources.list in build-137e9d3897d3b955d376c31057ce25ceeb2f155e RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '137e9d3897d3b955d376c31057ce25ceeb2f155e', 'amd64'] Updating debian chroot for build 137e9d3897d3b955d376c31057ce25ceeb2f155e Ign http://ftpmaster.internal quantal InRelease Get:1 http://ftpmaster.internal quantal Release.gpg [198 B] Get:2 http://ftpmaster.internal quantal Release [49.6 kB] Get:3 http://ftpmaster.internal quantal/main amd64 Packages [1289 kB] Get:4 http://ftpmaster.internal quantal/universe amd64 Packages [5049 kB] Get:5 http://ftpmaster.internal quantal/main TranslationIndex [74 B] Get:6 http://ftpmaster.internal quantal/universe TranslationIndex [75 B] Get:7 http://ftpmaster.internal quantal/main Translation-en [719 kB] Get:8 http://ftpmaster.internal quantal/universe Translation-en [3512 kB] Fetched 10.6 MB in 9s (1123 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: grep libasn1-8-heimdal libdb5.1 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libkrb5-26-heimdal libpng12-0 libroken18-heimdal libsqlite3-0 libusb-0.1-4 libwind0-heimdal perl perl-base perl-modules 17 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 11.8 MB of archives. After this operation, 73.7 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! grep perl perl-base perl-modules libdb5.1 libusb-0.1-4 libsqlite3-0 libpng12-0 libroken18-heimdal libasn1-8-heimdal libhcrypto4-heimdal libheimbase1-heimdal libwind0-heimdal libhx509-5-heimdal libkrb5-26-heimdal libheimntlm0-heimdal libgssapi3-heimdal Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ quantal/main grep amd64 2.12-2 [277 kB] Get:2 http://ftpmaster.internal/ubuntu/ quantal/main perl amd64 5.14.2-10 [4417 kB] Get:3 http://ftpmaster.internal/ubuntu/ quantal/main perl-base amd64 5.14.2-10 [1512 kB] Get:4 http://ftpmaster.internal/ubuntu/ quantal/main perl-modules all 5.14.2-10 [3392 kB] Get:5 http://ftpmaster.internal/ubuntu/ quantal/main libdb5.1 amd64 5.1.29-4 [704 kB] Get:6 http://ftpmaster.internal/ubuntu/ quantal/main libusb-0.1-4 amd64 2:0.1.12-21 [17.7 kB] Get:7 http://ftpmaster.internal/ubuntu/ quantal/main libsqlite3-0 amd64 3.7.12.1-1 [364 kB] Get:8 http://ftpmaster.internal/ubuntu/ quantal/main libpng12-0 amd64 1.2.49-1ubuntu1 [130 kB] Get:9 http://ftpmaster.internal/ubuntu/ quantal/main libroken18-heimdal amd64 1.6~git20120403+dfsg1-1 [46.3 kB] Get:10 http://ftpmaster.internal/ubuntu/ quantal/main libasn1-8-heimdal amd64 1.6~git20120403+dfsg1-1 [225 kB] Get:11 http://ftpmaster.internal/ubuntu/ quantal/main libhcrypto4-heimdal amd64 1.6~git20120403+dfsg1-1 [104 kB] Get:12 http://ftpmaster.internal/ubuntu/ quantal/main libheimbase1-heimdal amd64 1.6~git20120403+dfsg1-1 [33.4 kB] Get:13 http://ftpmaster.internal/ubuntu/ quantal/main libwind0-heimdal amd64 1.6~git20120403+dfsg1-1 [77.8 kB] Get:14 http://ftpmaster.internal/ubuntu/ quantal/main libhx509-5-heimdal amd64 1.6~git20120403+dfsg1-1 [126 kB] Get:15 http://ftpmaster.internal/ubuntu/ quantal/main libkrb5-26-heimdal amd64 1.6~git20120403+dfsg1-1 [234 kB] Get:16 http://ftpmaster.internal/ubuntu/ quantal/main libheimntlm0-heimdal amd64 1.6~git20120403+dfsg1-1 [16.1 kB] Get:17 http://ftpmaster.internal/ubuntu/ quantal/main libgssapi3-heimdal amd64 1.6~git20120403+dfsg1-1 [109 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 11.8 MB in 0s (20.5 MB/s) (Reading database ... 12279 files and directories currently installed.) Preparing to replace grep 2.11-3 (using .../archives/grep_2.12-2_amd64.deb) ... Unpacking replacement grep ... Setting up grep (2.12-2) ... (Reading database ... 12279 files and directories currently installed.) Preparing to replace perl 5.14.2-9 (using .../perl_5.14.2-10_amd64.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.14.2-9 (using .../perl-base_5.14.2-10_amd64.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.14.2-10) ... (Reading database ... 12284 files and directories currently installed.) Preparing to replace perl-modules 5.14.2-9 (using .../perl-modules_5.14.2-10_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace libdb5.1 5.1.29-1build1 (using .../libdb5.1_5.1.29-4_amd64.deb) ... Unpacking replacement libdb5.1 ... Setting up libdb5.1 (5.1.29-4) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12284 files and directories currently installed.) Preparing to replace libusb-0.1-4 2:0.1.12-20 (using .../libusb-0.1-4_2%3a0.1.12-21_amd64.deb) ... Unpacking replacement libusb-0.1-4 ... Setting up libusb-0.1-4 (2:0.1.12-21) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12284 files and directories currently installed.) Preparing to replace libsqlite3-0 3.7.11-3 (using .../libsqlite3-0_3.7.12.1-1_amd64.deb) ... Unpacking replacement libsqlite3-0 ... Preparing to replace libpng12-0 1.2.46-3ubuntu4 (using .../libpng12-0_1.2.49-1ubuntu1_amd64.deb) ... Unpacking replacement libpng12-0 ... Preparing to replace libroken18-heimdal 1.6~git20120311.dfsg.1-2 (using .../libroken18-heimdal_1.6~git20120403+dfsg1-1_amd64.deb) ... Unpacking replacement libroken18-heimdal ... Preparing to replace libasn1-8-heimdal 1.6~git20120311.dfsg.1-2 (using .../libasn1-8-heimdal_1.6~git20120403+dfsg1-1_amd64.deb) ... Unpacking replacement libasn1-8-heimdal ... Preparing to replace libhcrypto4-heimdal 1.6~git20120311.dfsg.1-2 (using .../libhcrypto4-heimdal_1.6~git20120403+dfsg1-1_amd64.deb) ... Unpacking replacement libhcrypto4-heimdal ... Preparing to replace libheimbase1-heimdal 1.6~git20120311.dfsg.1-2 (using .../libheimbase1-heimdal_1.6~git20120403+dfsg1-1_amd64.deb) ... Unpacking replacement libheimbase1-heimdal ... Preparing to replace libwind0-heimdal 1.6~git20120311.dfsg.1-2 (using .../libwind0-heimdal_1.6~git20120403+dfsg1-1_amd64.deb) ... Unpacking replacement libwind0-heimdal ... Preparing to replace libhx509-5-heimdal 1.6~git20120311.dfsg.1-2 (using .../libhx509-5-heimdal_1.6~git20120403+dfsg1-1_amd64.deb) ... Unpacking replacement libhx509-5-heimdal ... Preparing to replace libkrb5-26-heimdal 1.6~git20120311.dfsg.1-2 (using .../libkrb5-26-heimdal_1.6~git20120403+dfsg1-1_amd64.deb) ... Unpacking replacement libkrb5-26-heimdal ... Preparing to replace libheimntlm0-heimdal 1.6~git20120311.dfsg.1-2 (using .../libheimntlm0-heimdal_1.6~git20120403+dfsg1-1_amd64.deb) ... Unpacking replacement libheimntlm0-heimdal ... Preparing to replace libgssapi3-heimdal 1.6~git20120311.dfsg.1-2 (using .../libgssapi3-heimdal_1.6~git20120403+dfsg1-1_amd64.deb) ... Unpacking replacement libgssapi3-heimdal ... Setting up libsqlite3-0 (3.7.12.1-1) ... Setting up libpng12-0 (1.2.49-1ubuntu1) ... Setting up libroken18-heimdal (1.6~git20120403+dfsg1-1) ... Setting up libasn1-8-heimdal (1.6~git20120403+dfsg1-1) ... Setting up libhcrypto4-heimdal (1.6~git20120403+dfsg1-1) ... Setting up libheimbase1-heimdal (1.6~git20120403+dfsg1-1) ... Setting up libwind0-heimdal (1.6~git20120403+dfsg1-1) ... Setting up libhx509-5-heimdal (1.6~git20120403+dfsg1-1) ... Setting up libkrb5-26-heimdal (1.6~git20120403+dfsg1-1) ... Setting up libheimntlm0-heimdal (1.6~git20120403+dfsg1-1) ... Setting up libgssapi3-heimdal (1.6~git20120403+dfsg1-1) ... Setting up perl-modules (5.14.2-10) ... Setting up perl (5.14.2-10) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '137e9d3897d3b955d376c31057ce25ceeb2f155e', 'amd64', 'quantal', '--nolog', '--batch', '--archive=ubuntu', '--dist=quantal', '--purpose=PRIMARY', '--architecture=amd64', '--comp=universe', 'massxpert_3.2.2-1.dsc'] Initiating build 137e9d3897d3b955d376c31057ce25ceeb2f155e with 2 jobs across 2 processor cores. Automatic build of massxpert_3.2.2-1 on yellow by sbuild/amd64 1.170.5 Build started at 20120525-0729 ****************************************************************************** massxpert_3.2.2-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 7.0.50~), libqt4-dev (>= 4.4.3), cmake (>= 2.6.0), texlive-latex-recommended, texlive-fonts-recommended Checking for already installed source dependencies... debhelper: missing libqt4-dev: missing cmake: missing texlive-latex-recommended: missing texlive-fonts-recommended: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper libqt4-dev cmake texlive-latex-recommended texlive-fonts-recommended Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils cmake-data dh-apparmor ed emacsen-common file fontconfig fontconfig-config gettext gettext-base groff-base html2text intltool-debian libarchive12 libaudio2 libcroco3 libcurl3 libexpat1 libfontconfig1 libfreetype6 libgettextpo0 libgraphite3 libice6 libjpeg-turbo8 libjpeg8 libkpathsea6 liblcms1 liblcms2-2 libmagic1 libmng1 libnettle4 libpaper-utils libpaper1 libpipeline1 libpoppler19 libptexenc1 libqt4-dbus libqt4-declarative libqt4-designer libqt4-help libqt4-network libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtgui4 libsm6 libtiff4 libunistring0 libx11-6 libx11-data libxau6 libxaw7 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmlrpc-core-c3 libxmu6 libxpm4 libxrender1 libxt6 luatex man-db mime-support po-debconf qt4-linguist-tools qt4-qmake tex-common texlive-base texlive-binaries texlive-common texlive-doc-base texlive-latex-base ttf-dejavu-core ttf-marvosym ucf x11-common Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc groff nas liblcms-utils liblcms2-utils poppler-data libqt4-declarative-folderlistmodel libqt4-declarative-gestures libqt4-declarative-particles libqt4-declarative-shaders qt4-qmlviewer libmysqlclient-dev libpq-dev libsqlite3-dev qt4-dev-tools qt4-doc unixodbc-dev libthai0 qt4-qtconfig less www-browser libmail-box-perl perl-tk ghostscript xpdf-reader pdf-viewer gv postscript-viewer Recommended packages: curl wget lynx-cur qdbus libqt4-opengl-dev libqtwebkit-dev libqt4-sql-mysql libqt4-sql-odbc libqt4-sql-psql libqt4-sql-sqlite libcups2 xml-core texlive-luatex libmail-sendmail-perl lmodern python ruby wish texlive-fonts-recommended-doc tipa tex-gyre texlive-latex-base-doc texlive-latex-recommended-doc prosper latex-beamer latex-xcolor The following NEW packages will be installed: bsdmainutils cmake cmake-data debhelper dh-apparmor ed emacsen-common file fontconfig fontconfig-config gettext gettext-base groff-base html2text intltool-debian libarchive12 libaudio2 libcroco3 libcurl3 libexpat1 libfontconfig1 libfreetype6 libgettextpo0 libgraphite3 libice6 libjpeg-turbo8 libjpeg8 libkpathsea6 liblcms1 liblcms2-2 libmagic1 libmng1 libnettle4 libpaper-utils libpaper1 libpipeline1 libpoppler19 libptexenc1 libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-help libqt4-network libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqtcore4 libqtgui4 libsm6 libtiff4 libunistring0 libx11-6 libx11-data libxau6 libxaw7 libxcb1 libxdmcp6 libxext6 libxi6 libxml2 libxmlrpc-core-c3 libxmu6 libxpm4 libxrender1 libxt6 luatex man-db mime-support po-debconf qt4-linguist-tools qt4-qmake tex-common texlive-base texlive-binaries texlive-common texlive-doc-base texlive-fonts-recommended texlive-latex-base texlive-latex-recommended ttf-dejavu-core ttf-marvosym ucf x11-common 0 upgraded, 89 newly installed, 0 to remove and 0 not upgraded. Need to get 86.4 MB of archives. After this operation, 260 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libexpat1 libmagic1 libpipeline1 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libxext6 libxml2 libnettle4 libarchive12 x11-common libice6 libsm6 libxt6 libaudio2 libcroco3 libcurl3 libfreetype6 ucf ttf-dejavu-core fontconfig-config libfontconfig1 libunistring0 libgettextpo0 libjpeg-turbo8 liblcms1 liblcms2-2 libjpeg8 libmng1 libtiff4 libpoppler19 libqtcore4 libqt4-xml libqt4-dbus libqt4-network libqt4-script libqt4-sql libqt4-xmlpatterns fontconfig libxi6 libxrender1 libqtgui4 libqt4-declarative libqt4-designer libqt4-help libqt4-qt3support libqt4-scripttools libqt4-svg libqt4-test libxmu6 libxpm4 libxaw7 file mime-support bsdmainutils ed gettext-base groff-base man-db libxmlrpc-core-c3 emacsen-common cmake-data cmake html2text gettext intltool-debian po-debconf dh-apparmor debhelper libgraphite3 libkpathsea6 libpaper1 libpaper-utils libptexenc1 qt4-linguist-tools qt4-qmake libqt4-dev luatex tex-common texlive-common texlive-doc-base texlive-binaries texlive-base ttf-marvosym texlive-fonts-recommended texlive-latex-base texlive-latex-recommended Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ quantal/main libexpat1 amd64 2.1.0-1 [129 kB] Get:2 http://ftpmaster.internal/ubuntu/ quantal/main libmagic1 amd64 5.11-1 [220 kB] Get:3 http://ftpmaster.internal/ubuntu/ quantal/main libpipeline1 amd64 1.2.1-1 [26.5 kB] Get:4 http://ftpmaster.internal/ubuntu/ quantal/main libxau6 amd64 1:1.0.7-1 [8592 B] Get:5 http://ftpmaster.internal/ubuntu/ quantal/main libxdmcp6 amd64 1:1.1.1-1 [12.8 kB] Get:6 http://ftpmaster.internal/ubuntu/ quantal/main libxcb1 amd64 1.8.1-1 [44.7 kB] Get:7 http://ftpmaster.internal/ubuntu/ quantal/main libx11-data all 2:1.4.99.1-0ubuntu2 [168 kB] Get:8 http://ftpmaster.internal/ubuntu/ quantal/main libx11-6 amd64 2:1.4.99.1-0ubuntu2 [762 kB] Get:9 http://ftpmaster.internal/ubuntu/ quantal/main libxext6 amd64 2:1.3.1-2 [33.7 kB] Get:10 http://ftpmaster.internal/ubuntu/ quantal/main libxml2 amd64 2.7.8.dfsg-5.1ubuntu5 [673 kB] Get:11 http://ftpmaster.internal/ubuntu/ quantal/main libnettle4 amd64 2.4-1 [95.1 kB] Get:12 http://ftpmaster.internal/ubuntu/ quantal/main libarchive12 amd64 3.0.3-6ubuntu1 [272 kB] Get:13 http://ftpmaster.internal/ubuntu/ quantal/main x11-common all 1:7.6+12ubuntu1 [57.7 kB] Get:14 http://ftpmaster.internal/ubuntu/ quantal/main libice6 amd64 2:1.0.8-2 [47.0 kB] Get:15 http://ftpmaster.internal/ubuntu/ quantal/main libsm6 amd64 2:1.2.1-2 [18.1 kB] Get:16 http://ftpmaster.internal/ubuntu/ quantal/main libxt6 amd64 1:1.1.3-1 [187 kB] Get:17 http://ftpmaster.internal/ubuntu/ quantal/main libaudio2 amd64 1.9.3-5 [57.3 kB] Get:18 http://ftpmaster.internal/ubuntu/ quantal/main libcroco3 amd64 0.6.5-1 [99.3 kB] Get:19 http://ftpmaster.internal/ubuntu/ quantal/main libcurl3 amd64 7.25.0-1ubuntu2 [251 kB] Get:20 http://ftpmaster.internal/ubuntu/ quantal/main libfreetype6 amd64 2.4.8-1ubuntu2 [343 kB] Get:21 http://ftpmaster.internal/ubuntu/ quantal/main ucf all 3.0025+nmu3 [55.0 kB] Get:22 http://ftpmaster.internal/ubuntu/ quantal/main ttf-dejavu-core all 2.33-2ubuntu1 [1552 kB] Get:23 http://ftpmaster.internal/ubuntu/ quantal/main fontconfig-config all 2.8.0-3ubuntu9 [44.4 kB] Get:24 http://ftpmaster.internal/ubuntu/ quantal/main libfontconfig1 amd64 2.8.0-3ubuntu9 [124 kB] Get:25 http://ftpmaster.internal/ubuntu/ quantal/main libunistring0 amd64 0.9.3-5 [427 kB] Get:26 http://ftpmaster.internal/ubuntu/ quantal/main libgettextpo0 amd64 0.18.1.1-5ubuntu4 [125 kB] Get:27 http://ftpmaster.internal/ubuntu/ quantal/main libjpeg-turbo8 amd64 1.1.90+svn733-0ubuntu4 [110 kB] Get:28 http://ftpmaster.internal/ubuntu/ quantal/main liblcms1 amd64 1.19.dfsg-1ubuntu3 [106 kB] Get:29 http://ftpmaster.internal/ubuntu/ quantal/main liblcms2-2 amd64 2.2+git20110628-2ubuntu3 [142 kB] Get:30 http://ftpmaster.internal/ubuntu/ quantal/main libjpeg8 amd64 8c-2ubuntu7 [2112 B] Get:31 http://ftpmaster.internal/ubuntu/ quantal/main libmng1 amd64 1.0.10-3 [215 kB] Get:32 http://ftpmaster.internal/ubuntu/ quantal/main libtiff4 amd64 3.9.5-2ubuntu1 [144 kB] Get:33 http://ftpmaster.internal/ubuntu/ quantal/main libpoppler19 amd64 0.18.4-1ubuntu2 [773 kB] Get:34 http://ftpmaster.internal/ubuntu/ quantal/main libqtcore4 amd64 4:4.8.1-0ubuntu4.1 [2022 kB] Get:35 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-xml amd64 4:4.8.1-0ubuntu4.1 [91.8 kB] Get:36 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-dbus amd64 4:4.8.1-0ubuntu4.1 [179 kB] Get:37 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-network amd64 4:4.8.1-0ubuntu4.1 [534 kB] Get:38 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-script amd64 4:4.8.1-0ubuntu4.1 [758 kB] Get:39 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-sql amd64 4:4.8.1-0ubuntu4.1 [96.9 kB] Get:40 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-xmlpatterns amd64 4:4.8.1-0ubuntu4.1 [1031 kB] Get:41 http://ftpmaster.internal/ubuntu/ quantal/main fontconfig amd64 2.8.0-3ubuntu9 [155 kB] Get:42 http://ftpmaster.internal/ubuntu/ quantal/main libxi6 amd64 2:1.6.0-0ubuntu2 [30.1 kB] Get:43 http://ftpmaster.internal/ubuntu/ quantal/main libxrender1 amd64 1:0.9.7-1 [20.5 kB] Get:44 http://ftpmaster.internal/ubuntu/ quantal/main libqtgui4 amd64 4:4.8.1-0ubuntu4.1 [4023 kB] Get:45 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-declarative amd64 4:4.8.1-0ubuntu4.1 [1062 kB] Get:46 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-designer amd64 4:4.8.1-0ubuntu4.1 [3611 kB] Get:47 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-help amd64 4:4.8.1-0ubuntu4.1 [200 kB] Get:48 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-qt3support amd64 4:4.8.1-0ubuntu4.1 [1022 kB] Get:49 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-scripttools amd64 4:4.8.1-0ubuntu4.1 [219 kB] Get:50 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-svg amd64 4:4.8.1-0ubuntu4.1 [137 kB] Get:51 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-test amd64 4:4.8.1-0ubuntu4.1 [60.2 kB] Get:52 http://ftpmaster.internal/ubuntu/ quantal/main libxmu6 amd64 2:1.1.1-1 [53.8 kB] Get:53 http://ftpmaster.internal/ubuntu/ quantal/main libxpm4 amd64 1:3.5.10-1 [38.3 kB] Get:54 http://ftpmaster.internal/ubuntu/ quantal/main libxaw7 amd64 2:1.0.10-2 [204 kB] Get:55 http://ftpmaster.internal/ubuntu/ quantal/main file amd64 5.11-1 [20.0 kB] Get:56 http://ftpmaster.internal/ubuntu/ quantal/main mime-support all 3.51-1ubuntu1 [30.7 kB] Get:57 http://ftpmaster.internal/ubuntu/ quantal/main bsdmainutils amd64 9.0.2ubuntu1 [201 kB] Get:58 http://ftpmaster.internal/ubuntu/ quantal/main ed amd64 1.6-1 [51.6 kB] Get:59 http://ftpmaster.internal/ubuntu/ quantal/main gettext-base amd64 0.18.1.1-5ubuntu4 [80.1 kB] Get:60 http://ftpmaster.internal/ubuntu/ quantal/main groff-base amd64 1.21-7 [1046 kB] Get:61 http://ftpmaster.internal/ubuntu/ quantal/main man-db amd64 2.6.1-2 [756 kB] Get:62 http://ftpmaster.internal/ubuntu/ quantal/main libxmlrpc-core-c3 amd64 1.16.33-3.1ubuntu5 [178 kB] Get:63 http://ftpmaster.internal/ubuntu/ quantal/main emacsen-common all 1.4.22ubuntu1 [16.9 kB] Get:64 http://ftpmaster.internal/ubuntu/ quantal/main cmake-data all 2.8.8-2ubuntu1 [737 kB] Get:65 http://ftpmaster.internal/ubuntu/ quantal/main cmake amd64 2.8.8-2ubuntu1 [4594 kB] Get:66 http://ftpmaster.internal/ubuntu/ quantal/main html2text amd64 1.3.2a-15 [104 kB] Get:67 http://ftpmaster.internal/ubuntu/ quantal/main gettext amd64 0.18.1.1-5ubuntu4 [1207 kB] Get:68 http://ftpmaster.internal/ubuntu/ quantal/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:69 http://ftpmaster.internal/ubuntu/ quantal/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:70 http://ftpmaster.internal/ubuntu/ quantal/main dh-apparmor all 2.7.102-0ubuntu4 [9548 B] Get:71 http://ftpmaster.internal/ubuntu/ quantal/main debhelper all 9.20120419ubuntu2 [609 kB] Get:72 http://ftpmaster.internal/ubuntu/ quantal/main libgraphite3 amd64 1:2.3.1-0.2build1 [186 kB] Get:73 http://ftpmaster.internal/ubuntu/ quantal/main libkpathsea6 amd64 2012.20120516-1 [73.0 kB] Get:74 http://ftpmaster.internal/ubuntu/ quantal/main libpaper1 amd64 1.1.24+nmu1build1 [14.2 kB] Get:75 http://ftpmaster.internal/ubuntu/ quantal/main libpaper-utils amd64 1.1.24+nmu1build1 [9040 B] Get:76 http://ftpmaster.internal/ubuntu/ quantal/main libptexenc1 amd64 2012.20120516-1 [38.5 kB] Get:77 http://ftpmaster.internal/ubuntu/ quantal/main qt4-linguist-tools amd64 4:4.8.1-0ubuntu4.1 [824 kB] Get:78 http://ftpmaster.internal/ubuntu/ quantal/main qt4-qmake amd64 4:4.8.1-0ubuntu4.1 [1262 kB] Get:79 http://ftpmaster.internal/ubuntu/ quantal/main libqt4-dev amd64 4:4.8.1-0ubuntu4.1 [2438 kB] Get:80 http://ftpmaster.internal/ubuntu/ quantal/main luatex amd64 0.70.1.20120524-1 [2419 kB] Get:81 http://ftpmaster.internal/ubuntu/ quantal/main tex-common all 3.11 [624 kB] Get:82 http://ftpmaster.internal/ubuntu/ quantal/main texlive-common all 2012.20120516-1 [191 kB] Get:83 http://ftpmaster.internal/ubuntu/ quantal/main texlive-doc-base all 2012.20120516-1 [1669 kB] Get:84 http://ftpmaster.internal/ubuntu/ quantal/main texlive-binaries amd64 2012.20120516-1 [17.3 MB] Get:85 http://ftpmaster.internal/ubuntu/ quantal/main texlive-base all 2012.20120516-1 [14.1 MB] Get:86 http://ftpmaster.internal/ubuntu/ quantal/main ttf-marvosym all 0.1+dfsg-2 [46.9 kB] Get:87 http://ftpmaster.internal/ubuntu/ quantal/main texlive-fonts-recommended all 2012.20120516-1 [5172 kB] Get:88 http://ftpmaster.internal/ubuntu/ quantal/main texlive-latex-base all 2012.20120516-1 [863 kB] Get:89 http://ftpmaster.internal/ubuntu/ quantal/main texlive-latex-recommended all 2012.20120516-1 [6366 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 86.4 MB in 4s (20.4 MB/s) Selecting previously unselected package libexpat1. 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Setting up libxcb1 (1.8.1-1) ... Setting up libx11-data (2:1.4.99.1-0ubuntu2) ... Setting up libx11-6 (2:1.4.99.1-0ubuntu2) ... Setting up libxext6 (2:1.3.1-2) ... Setting up libxml2 (2.7.8.dfsg-5.1ubuntu5) ... Setting up libnettle4 (2.4-1) ... Setting up libarchive12 (3.0.3-6ubuntu1) ... Setting up x11-common (1:7.6+12ubuntu1) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6 (2:1.0.8-2) ... Setting up libsm6 (2:1.2.1-2) ... Setting up libxt6 (1:1.1.3-1) ... Setting up libaudio2 (1.9.3-5) ... Setting up libcroco3 (0.6.5-1) ... Setting up libcurl3 (7.25.0-1ubuntu2) ... Setting up libfreetype6 (2.4.8-1ubuntu2) ... Setting up ucf (3.0025+nmu3) ... Setting up ttf-dejavu-core (2.33-2ubuntu1) ... Setting up fontconfig-config (2.8.0-3ubuntu9) ... Setting up libfontconfig1 (2.8.0-3ubuntu9) ... Setting up libunistring0 (0.9.3-5) ... Setting up libgettextpo0 (0.18.1.1-5ubuntu4) ... Setting up libjpeg-turbo8 (1.1.90+svn733-0ubuntu4) ... Setting up liblcms1 (1.19.dfsg-1ubuntu3) ... Setting up liblcms2-2 (2.2+git20110628-2ubuntu3) ... Setting up libjpeg8 (8c-2ubuntu7) ... Setting up libmng1 (1.0.10-3) ... Setting up libtiff4 (3.9.5-2ubuntu1) ... Setting up libpoppler19 (0.18.4-1ubuntu2) ... Setting up libqtcore4 (4:4.8.1-0ubuntu4.1) ... Setting up libqt4-xml (4:4.8.1-0ubuntu4.1) ... Setting up libqt4-dbus (4:4.8.1-0ubuntu4.1) ... Setting up libqt4-network (4:4.8.1-0ubuntu4.1) ... Setting up libqt4-script (4:4.8.1-0ubuntu4.1) ... Setting up libqt4-sql (4:4.8.1-0ubuntu4.1) ... Setting up libqt4-xmlpatterns (4:4.8.1-0ubuntu4.1) ... Setting up fontconfig (2.8.0-3ubuntu9) ... Cleaning up old fontconfig caches... done. Regenerating fonts cache... done. Setting up libxi6 (2:1.6.0-0ubuntu2) ... Setting up libxrender1 (1:0.9.7-1) ... Setting up libqt4-test (4:4.8.1-0ubuntu4.1) ... Setting up libxmu6 (2:1.1.1-1) ... Setting up libxpm4 (1:3.5.10-1) ... Setting up libxaw7 (2:1.0.10-2) ... Setting up file (5.11-1) ... Setting up mime-support (3.51-1ubuntu1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode. Setting up bsdmainutils (9.0.2ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up ed (1.6-1) ... Setting up gettext-base (0.18.1.1-5ubuntu4) ... Setting up groff-base (1.21-7) ... Setting up man-db (2.6.1-2) ... Building database of manual pages ... Setting up libxmlrpc-core-c3 (1.16.33-3.1ubuntu5) ... Setting up emacsen-common (1.4.22ubuntu1) ... emacsen-common: Handling install of emacsen flavor emacs Setting up cmake-data (2.8.8-2ubuntu1) ... emacsen-common: Handling install of emacsen flavor emacs Setting up cmake (2.8.8-2ubuntu1) ... Setting up html2text (1.3.2a-15) ... Setting up gettext (0.18.1.1-5ubuntu4) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up dh-apparmor (2.7.102-0ubuntu4) ... Setting up debhelper (9.20120419ubuntu2) ... Setting up libgraphite3 (1:2.3.1-0.2build1) ... Setting up libkpathsea6 (2012.20120516-1) ... Setting up libpaper1 (1.1.24+nmu1build1) ... Creating config file /etc/papersize with new version Setting up libpaper-utils (1.1.24+nmu1build1) ... Setting up libptexenc1 (2012.20120516-1) ... Setting up qt4-linguist-tools (4:4.8.1-0ubuntu4.1) ... update-alternatives: using /usr/bin/lupdate-qt4 to provide /usr/bin/lupdate (lupdate) in auto mode. update-alternatives: using /usr/bin/lrelease-qt4 to provide /usr/bin/lrelease (lrelease) in auto mode. Setting up qt4-qmake (4:4.8.1-0ubuntu4.1) ... update-alternatives: using /usr/bin/qmake-qt4 to provide /usr/bin/qmake (qmake) in auto mode. Setting up luatex (0.70.1.20120524-1) ... texlive-base is not ready, cannot create formats Setting up tex-common (3.11) ... Running mktexlsr. This may take some time... done. texlive-base is not ready, delaying updmap-sys call texlive-base is not ready, skipping fmtutil-sys --all call Setting up texlive-common (2012.20120516-1) ... Setting up texlive-doc-base (2012.20120516-1) ... Setting up texlive-binaries (2012.20120516-1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode. update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode. Building format(s) --refresh. This may take some time... done. Setting up ttf-marvosym (0.1+dfsg-2) ... Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Setting up texlive-base (2012.20120516-1) ... /usr/bin/tl-paper: setting paper size for dvips to a4. /usr/bin/tl-paper: setting paper size for dvipdfmx to a4. /usr/bin/tl-paper: setting paper size for xdvi to a4. /usr/bin/tl-paper: setting paper size for pdftex to a4. dpkg: error: --compare-versions takes three arguments: Type dpkg --help for help about installing and deinstalling packages [*]; Use `dselect' or `aptitude' for user-friendly package management; Type dpkg -Dhelp for a list of dpkg debug flag values; Type dpkg --force-help for a list of forcing options; Type dpkg-deb --help for help about manipulating *.deb files; Options marked [*] produce a lot of output - pipe it through `less' or `more' ! Running mktexlsr. This may take some time... done. Building format(s) --all. This may take some time... done. Processing triggers for tex-common ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up texlive-fonts-recommended (2012.20120516-1) ... Setting up texlive-latex-base (2012.20120516-1) ... Running mktexlsr. This may take some time... done. Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-latex-base.cnf. This may take some time... done. Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Setting up texlive-latex-recommended (2012.20120516-1) ... Processing triggers for tex-common ... Running mktexlsr. This may take some time... done. Setting up libqt4-declarative (4:4.8.1-0ubuntu4.1) ... Setting up libqtgui4 (4:4.8.1-0ubuntu4.1) ... Setting up libqt4-designer (4:4.8.1-0ubuntu4.1) ... Setting up libqt4-help (4:4.8.1-0ubuntu4.1) ... Setting up libqt4-qt3support (4:4.8.1-0ubuntu4.1) ... Setting up libqt4-scripttools (4:4.8.1-0ubuntu4.1) ... Setting up libqt4-svg (4:4.8.1-0ubuntu4.1) ... Setting up libqt4-dev (4:4.8.1-0ubuntu4.1) ... update-alternatives: using /usr/bin/moc-qt4 to provide /usr/bin/moc (moc) in auto mode. update-alternatives: using /usr/bin/uic-qt4 to provide /usr/bin/uic (uic) in auto mode. update-alternatives: warning: skip creation of /usr/share/man/man1/uic.1.gz because associated file /usr/share/man/man1/uic-qt4.1.gz (of link group uic) doesn't exist. Processing triggers for libc-bin ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.15-0ubuntu12 make_3.81-8.1ubuntu1 dpkg-dev_1.16.1.2ubuntu8 gcc-4.7_4.7.0-7ubuntu4 g++-4.7_4.7.0-7ubuntu4 binutils_2.22-6ubuntu1 libstdc++6-4.7-dev_4.7.0-7ubuntu4 libstdc++6_4.7.0-7ubuntu4 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Mon May 14 17:12:49 2012 UTC using DSA key ID C78F687C gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./massxpert_3.2.2-1.dsc dpkg-source: info: extracting massxpert in massxpert-3.2.2 dpkg-source: info: unpacking massxpert_3.2.2.orig.tar.gz dpkg-source: info: unpacking massxpert_3.2.2-1.debian.tar.gz dpkg-buildpackage: source package massxpert dpkg-buildpackage: source version 3.2.2-1 dpkg-source --before-build massxpert-3.2.2 dpkg-buildpackage: host architecture amd64 /usr/bin/fakeroot debian/rules clean "---------------------------------------" NUMJOBS: 2 MAKEFLAGS: -j2 DEB_BUILD_OPTIONS: parallel=2 "---------------------------------------" dh_testdir dh_testroot dh_clean rm -f debian/massxpert.substvars rm -f debian/massxpert.*.debhelper rm -rf debian/massxpert/ rm -f debian/massxpert-dbg.substvars rm -f debian/massxpert-dbg.*.debhelper rm -rf debian/massxpert-dbg/ rm -f debian/massxpert-data.substvars rm -f debian/massxpert-data.*.debhelper rm -rf debian/massxpert-data/ rm -f debian/massxpert-doc.substvars rm -f debian/massxpert-doc.*.debhelper rm -rf debian/massxpert-doc/ rm -f debian/*.debhelper.log rm -f debian/files find . \( \( -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} \; \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \) rm -f *-stamp rm -rf /build/buildd/massxpert-3.2.2/debian/build-indep rm -rf /build/buildd/massxpert-3.2.2/debian/build-arch rm -rf /build/buildd/massxpert-3.2.2/debian/tmp-indep /build/buildd/massxpert-3.2.2/debian/tmp-arch debian/rules build "---------------------------------------" NUMJOBS: 2 MAKEFLAGS: -j2 DEB_BUILD_OPTIONS: parallel=2 "---------------------------------------" dh_testdir dh_prep -i rm -f debian/massxpert-data.substvars rm -f debian/massxpert-data.*.debhelper rm -rf debian/massxpert-data/ rm -f debian/massxpert-doc.substvars rm -f debian/massxpert-doc.*.debhelper rm -rf debian/massxpert-doc/ rm -rf /build/buildd/massxpert-3.2.2/debian/tmp-indep mkdir -p /build/buildd/massxpert-3.2.2/debian/build-indep cd /build/buildd/massxpert-3.2.2/debian/build-indep && \ /usr/bin/cmake \ -D BUILD_PROGRAM=0 \ -D BUILD_DATA=1 \ -D BUILD_USERMANUAL=1 \ -D CMAKE_INSTALL_PREFIX=/usr ../.. -- The C compiler identification is GNU 4.7.0 -- The CXX compiler identification is GNU 4.7.0 -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done ~~~~~~~~~~~~~~~~~~~~~~~~ SUMMARY ~~~~~~~~~~~~~~~~~~~~~~~~ -- BUILD_PROGRAM:0 -- BUILD_DATA:1 -- BUILD_USERMANUAL:1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -- TARGET: massxpert--VERSION: 3.2.2 -- CMAKE_INSTALL_PREFIX: /usr -- MASSXPERT_BIN_DIR: /usr/bin -- MASSXPERT_DATA_DIR: /usr/share/massxpert -- MASSXPERT_PLUGIN_DIR: /usr/lib/massxpert/plugins -- MASSXPERT_LOCALE_DIR: /usr/share/massxpert/locales -- MASSXPERT_DOC_DIR: /usr/share/doc/massxpert -- MASSXPERT_USERMAN_DIR: /usr/share/doc/massxpert/usermanual ~~~~~~~~~~~~~~~~~~~~~~~~ SUMMARY ~~~~~~~~~~~~~~~~~~~~~~~~ -- Configuring done -- Generating done -- Build files have been written to: /build/buildd/massxpert-3.2.2/debian/build-indep # No more this way, as we now use CMake with UseLATEX.cmake # cd /build/buildd/massxpert-3.2.2/usermanual && /usr/bin/make -f Makefile all_no_reload /usr/bin/make -C /build/buildd/massxpert-3.2.2/debian/build-indep make[1]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-indep' /usr/bin/cmake -H/build/buildd/massxpert-3.2.2 -B/build/buildd/massxpert-3.2.2/debian/build-indep --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-indep' /usr/bin/make -f usermanual/CMakeFiles/pdf.dir/build.make usermanual/CMakeFiles/pdf.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-indep' cd /build/buildd/massxpert-3.2.2/debian/build-indep && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.2 /build/buildd/massxpert-3.2.2/usermanual /build/buildd/massxpert-3.2.2/debian/build-indep /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/CMakeFiles/pdf.dir/DependInfo.cmake --color= Scanning dependencies of target pdf make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-indep' /usr/bin/make -f usermanual/CMakeFiles/pdf.dir/build.make usermanual/CMakeFiles/pdf.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-indep' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 100 [ 2%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 2%] Generating index.tex cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/index.tex /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/index.tex Generating figures/addresses.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/addresses.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/addresses.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 2%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 51 [ 4%] Generating figures/isotopic-pattern-calculator.png Generating figures/dna-fragmentation.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/isotopic-pattern-calculator.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/isotopic-pattern-calculator.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/dna-fragmentation.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/dna-fragmentation.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 4%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 52 [ 6%] Generating figures/macosx-configuration-settings.png Generating figures/macosx-disk-image-on-desktop.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/macosx-configuration-settings.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/macosx-configuration-settings.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/macosx-disk-image-on-desktop.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/macosx-disk-image-on-desktop.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 6%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 53 [ 8%] Generating figures/macosx-disk-image-opened-in-finder.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/macosx-disk-image-opened-in-finder.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/macosx-disk-image-opened-in-finder.png Generating figures/macosx-massxpert-can-now-run.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/macosx-massxpert-can-now-run.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/macosx-massxpert-can-now-run.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 54 [ 8%] [ 10%] Generating figures/macosx-massxpert-installed-in-home-dir.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/macosx-massxpert-installed-in-home-dir.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/macosx-massxpert-installed-in-home-dir.png Generating figures/macosx-package-installer.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 10%] cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/macosx-package-installer.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/macosx-package-installer.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 55 [ 12%] Generating figures/macosx-package-installs-in-home-directory.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/macosx-package-installs-in-home-directory.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/macosx-package-installs-in-home-directory.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 12%] Generating figures/massxpert-configuration-settings-dlg.png Generating figures/nucac-polymer.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/massxpert-configuration-settings-dlg.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/massxpert-configuration-settings-dlg.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/nucac-polymer.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/nucac-polymer.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 56 [ 14%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 14%] Generating figures/nucacbond-formation.png Generating figures/peptbond-formation.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/nucacbond-formation.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/nucacbond-formation.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/peptbond-formation.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/peptbond-formation.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 57 [ 16%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles Generating figures/pol-chem-defs-directory-protein-and-saccharide.png [ 16%] cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/pol-chem-defs-directory-protein-and-saccharide.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/pol-chem-defs-directory-protein-and-saccharide.png Generating figures/prot-cleavage.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 58 cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/prot-cleavage.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/prot-cleavage.png [ 18%] Generating figures/prot-fragmentation.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/prot-fragmentation.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/prot-fragmentation.png [ 18%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 59 [ 20%] Generating figures/protein-monomer-acidobasic-data.png Generating figures/prot-polymer.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/protein-monomer-acidobasic-data.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/protein-monomer-acidobasic-data.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/prot-polymer.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/prot-polymer.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 20%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 60 [ 22%] Generating figures/sacch-polymer.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/sacch-polymer.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/sacch-polymer.png Generating figures/sacchbond-formation.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/sacchbond-formation.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/sacchbond-formation.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 22%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 22%] Generating figures/splashscreen.png Generating figures/select-pol-chem-def.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/splashscreen.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/splashscreen.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 61 [ 24%] cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/select-pol-chem-def.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/select-pol-chem-def.png Generating figures/xml-editing-emacs-vs-graphics.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xml-editing-emacs-vs-graphics.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xml-editing-emacs-vs-graphics.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 24%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 62 Generating figures/xpertcalc-isotopic-pattern-calculator-example-graph.png [ 26%] cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertcalc-isotopic-pattern-calculator-example-graph.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertcalc-isotopic-pattern-calculator-example-graph.png Generating figures/xpertcalc-isotopic-pattern-calculator.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 26%] cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertcalc-isotopic-pattern-calculator.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertcalc-isotopic-pattern-calculator.png Generating figures/xpertcalc-mz-calculator.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 63 [ 28%] cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertcalc-mz-calculator.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertcalc-mz-calculator.png Generating figures/xpertcalc-protein-1-letter-chempad.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertcalc-protein-1-letter-chempad.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertcalc-protein-1-letter-chempad.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 28%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 64 Generating figures/xpertcalc-protein-1-letter-recorder.png [ 30%] cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertcalc-protein-1-letter-recorder.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertcalc-protein-1-letter-recorder.png Generating figures/xpertcalc-protein-1-letter.png /usr/bin/cmake -E cmake_progress_report 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/build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertdef-atoms.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertdef-atoms.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertdef-cleavages.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertdef-cleavages.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 66 [ 34%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 34%] Generating figures/xpertdef-crosslinkers.png Generating figures/xpertdef-fragmentations-frag-rules.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertdef-crosslinkers.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertdef-crosslinkers.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertdef-fragmentations-frag-rules.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertdef-fragmentations-frag-rules.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 67 [ 36%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 36%] Generating figures/xpertdef-fragmentations-simplest.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertdef-fragmentations-simplest.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertdef-fragmentations-simplest.png /usr/bin/cmake -E cmake_progress_report 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figures/xpertdef-monomers-mass-differences.png Generating figures/xpertdef-monomers.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertdef-monomers-mass-differences.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertdef-monomers-mass-differences.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertdef-monomers.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertdef-monomers.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 70 [ 42%] [ 42%] Generating figures/xpertedit-3-letter-code-process-1-letter.png Generating figures/xpertdef-pol-chem-def.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertedit-3-letter-code-process-1-letter.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertedit-3-letter-code-process-1-letter.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertdef-pol-chem-def.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertdef-pol-chem-def.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 42%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 42%] Generating figures/xpertedit-3-letter-code-process-2-letters.png Generating figures/xpertedit-3-letter-code-process-3-letters.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy 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/build/buildd/massxpert-3.2.2/usermanual/figures/xpertedit-cfp-chromophore-disulfide-bond-no-account-cross-links.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertedit-cfp-chromophore-disulfide-bond-no-account-cross-links.png [ 46%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 73 [ 48%] Generating figures/xpertedit-chemistry-menu.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertedit-chemistry-menu.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertedit-chemistry-menu.png Generating figures/xpertedit-choose-pol-chem-def.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertedit-choose-pol-chem-def.png 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/build/buildd/massxpert-3.2.2/usermanual/figures/xpertedit-file-menu.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertedit-file-menu.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 77 /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 54%] [ 56%] Generating figures/xpertedit-find-sequence-dlg.png Generating figures/xpertedit-filtering-oligomer-data.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertedit-filtering-oligomer-data.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertedit-filtering-oligomer-data.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertedit-find-sequence-dlg.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertedit-find-sequence-dlg.png /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 78 /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles [ 58%] [ 58%] Generating figures/xpertedit-fragmentation-cross-linked-oligomer.png Generating figures/xpertedit-fragmentation.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertedit-fragmentation-cross-linked-oligomer.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertedit-fragmentation-cross-linked-oligomer.png cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E copy /build/buildd/massxpert-3.2.2/usermanual/figures/xpertedit-fragmentation.png /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual/figures/xpertedit-fragmentation.png 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If not, see http://www.gnu.org/l icenses/. ) [179] [180]) (./index.tex No file massxpert.ind. ) (./massxpert.aux) Package rerunfilecheck Warning: File `massxpert.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on massxpert.pdf (194 pages, 10076063 bytes). Transcript written on massxpert.log. cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E chdir /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual /usr/bin/pdflatex -interaction=nonstopmode massxpert.tex This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/Debian) restricted \write18 enabled. entering extended mode (./massxpert.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. 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Overfull \hbox (8.38528pt too wide) in paragraph at lines 38--42 \T1/aer/m/n/10 fully pro-grammable (that's the \T1/aer/m/sl/10 Xpert-Calc \T1/a er/m/n/10 mod-ule also part of the \T1/aer/m/sl/10 massXpert [1] [2] Overfull \hbox (10.50308pt too wide) in paragraph at lines 168--168 [][][]\T1/aer/m/sc/20.74 Program Avail-abil-ity, Tech-ni-cal- [3] Underfull \hbox (badness 10000) in paragraph at lines 196--201 Overfull \hbox (4.74527pt too wide) in paragraph at lines 212--214 []\T1/aer/m/n/10 The \T1/aer/m/sl/10 Xpert-Def \T1/aer/m/n/10 mod-ule (def-i-ni -tion of atoms and of new poly-mer chemistries); [4] [5] Overfull \hbox (19.99072pt too wide) in paragraph at lines 266--270 []\T1/aer/m/n/10 The gen-eral pol-icy for di-rect-ing ques-tions, com-ments, fe a-ture re-quests, \T1/aer/m/sl/10 massXpert Overfull \hbox (6.16531pt too wide) in paragraph at lines 266--270 \T1/aer/m/n/10 pro-gram and/or \T1/aer/m/sl/10 massXpert \T1/aer/m/n/10 doc-u-m en-ta-tion bug re-ports[] should be self-explanatory Underfull \hbox (badness 10000) in paragraph at lines 275--277 [6 <./figures/addresses.png>]) (./installation.tex Chapter 2. Underfull \hbox (badness 10000) in paragraph at lines 5--8 [7] Underfull \hbox (badness 10000) in paragraph at lines 86--88 [8] Overfull \hbox (9.62535pt too wide) in paragraph at lines 194--199 \T1/aer/m/n/10 At this point the soft-ware should have in-stalled in the des-ti -na-tion tree (\T1/aett/m/n/10 /usr/local [9] [10] Underfull \hbox (badness 1406) in paragraph at lines 347--347 []\T1/aer/m/n/10 Figure 2.1: []\T1/aer/bx/sl/10 massXpert \T1/aer/bx/n/10 con-f ig-u-ra-tion set-tings. \T1/aer/m/n/10 Upon run-ning the Underfull \hbox (badness 10000) in paragraph at lines 351--362 [11] [12 <./figures/massxpert-configuration-settings-dlg.png>] [13] [14]) (./basics-polchem.tex Chapter 3. Overfull \hbox (1.969pt too wide) in paragraph at lines 13--13 [][][]\T1/aer/m/sc/20.74 Polymers? Where? Ev-ery-where![] Overfull \hbox (7.65761pt too wide) in paragraph at lines 26--31 \T1/aer/m/it/10 molecules which are them-selves made from com-bi-na-tions of sm all sim-ple molecules\T1/aer/m/n/10 . [15] Underfull \vbox (badness 6876) has occurred while \output is active [16] [17 <./figures/peptbond-formation.png>] [18 <./figures/prot-polymer.png>] [19 <./figures/nucacbond-formation.png>] [20 <./figures/nucac-polymer.png>] [21 <./figures/sacchbond-formation.png> <./figu res/sacch-polymer.png>] [22] [23] [24 <./figures/prot-cleavage.png>] [25] [26] [27 <./figures/prot-fragmentation.png >] Overfull \hbox (1.18713pt too wide) in paragraph at lines 735--736 []\T1/aer/bx/it/10 b \T1/aer/bx/n/10 frag-ment se-ries[] \T1/aer/m/n/10 Sim-i- larly, the mass cal-cu-la-tion is math-e-mat-i-cally ex-pressed [28] Overfull \hbox (9.24484pt too wide) in paragraph at lines 761--772 \T1/aer/m/n/10 sense that they do not hold nei-ther of the two pre-cur-sor poly -mer's ends. \T1/aer/m/sl/10 massXpert [29] [30 <./figures/dna-fragmentation.png>] [31] Overfull \hbox (2.33554pt too wide) in paragraph at lines 893--895 \T1/aer/m/n/10 To sum up all what we have seen so far with poly-mer chain dis-r upt-ing chemistries: Overfull \hbox (7.70595pt too wide) in paragraph at lines 914--917 []\T1/aer/m/n/10 Fragments are never ion-ized au-to-mat-i-cally; ion-iza-tion ( gain/loss of a charged [32]) (./basics-massspec.tex Chapter 4. Underfull \vbox (badness 1033) has occurred while \output is active [33] [34] [35] Underfull \hbox (badness 10000) in paragraph at lines 174--176 Underfull \hbox (badness 10000) in paragraph at lines 197--199 [36] [37] [38]) (./generalities.tex Chapter 5. [39] [40] [41] [42]) (./xpertdef.tex Chapter 6. (/usr/share/texlive/texmf-dist/tex/latex/ae/t1aess.fd) [43] LaTeX Warning: `!h' float specifier changed to `!ht'. [44 <./figures/select-pol-chem-def.png (PNG co py)>] [45 <./figures/xpertdef-pol-chem-def.png>] [46 <./figures/xpertdef-atoms. png>] [47 <./figures/xpertdef-monomers.png>] Overfull \hbox (5.29686pt too wide) in paragraph at lines 297--306 \T1/aer/m/n/10 Polymer are of-ten ei-ther chem-i-cally or bio-chem-i-cally mod- i-fied. In na-ture, biopoly- [48 <./figures/xpertdef-monomers-mass- differences.png>] [49 <./figures/xpertdef-modifications.p ng>] [50 <./figures/xpertdef-crosslinkers.png>] [51 <./figures/xpertdef-cleavages.png>] Overfull \hbox (0.41591pt too wide) in paragraph at lines 547--562 \T1/aer/m/n/10 cleav-age spec-i-fi-ca-tion for ``CyanogenBromide''---that the o ligomers re-sult-ing from [52] Underfull \vbox (badness 10000) has occurred while \output is active [53 <./fig ures/xpertdef-fragmentations-simplest.png>] Underfull \hbox (badness 10000) in paragraph at lines 635--639 [54] [55 <./f igures/xpertdef-fragmentations-special-dna-a-base-case.png>] [56 <./figures/xpertde f-fragmentations-frag-rules.png>] Underfull \hbox (badness 10000) in paragraph at lines 747--758 Underfull \hbox (badness 10000) in paragraph at lines 782--790 [57] [58]) (./xpertcalc.tex Chapter 7. 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Underfull \vbox (badness 10000) has occurred while \output is active [69] Overfull \hbox (0.13066pt too wide) in paragraph at lines 32--32 [][][]\T1/aer/m/sl/20.74 XpertEdit \T1/aer/m/sc/20.74 Op-er-a-tion: \T1/aer/m/i t/20.74 In Me-dias Res[] [70 <./figures/xpertedit-sel ect-sample-sequence.png (PNG copy)>] [71 <./figures/xpertedit-choose-p ol-chem-def.png>] [72 <./figures/xpertedit-protein-main-view.png>] [73] Overfull \hbox (20.56702pt too wide) in paragraph at lines 362--365 []\T1/aer/m/sl/10 Chemistry[] \T1/aer/m/n/10 Cal-cu-late the monomeric/element [74] [75 <./figures/xpertedit-file-m enu.png> <./figures/xpertedit-chemistry-menu.png>] Overfull \hbox (4.06323pt too wide) in paragraph at lines 435--436 [] [76 <./figures/xpertedit-3-letter-code-whole-process.png>] [77] [78 <./figures/xp ertedit-sequence-editor-bad-char.png>] [79 <./figures/xpertedit-find-seq uence-dlg.png>] Underfull \vbox (badness 1297) has occurred while \output is active [80 <./figu res/xpertedit-sequence-editor-sequence-import-errors-first.png>] Underfull \hbox (badness 10000) in paragraph at lines 728--730 [81 <./figures/xpertedit-sequence-editor-sequence-import-errors-second.png>] Underfull \hbox (badness 10000) in paragraph at lines 770--781 [82] [83] Underfull \vbox (badness 1584) has occurred while \output is active [84 <./figu res/xpertedit-modify-monomer.png>] Underfull \vbox (badness 10000) has occurred while \output is active [85 <./fig ures/xpertedit-modify-monomer-manually-defined-modif.png>] [86 <./figures/xpertedit-modify-poly mer.png>] [87 <./figures/xpertedit-cros s-link-monomers.png>] [88 <./figures/xpertedit-cross-linked-mon omers.png>] [89 <./figures/xpertedit-cleavages.png>] [90] [91 <./figures/xpertedit-spectrum-creation-from-cleavages.png>] [92 <./figur es/xpertedit-spectrum-simulation-cleavage-oligomers.png>] [93] [94 <./figures/xpertedit-fragmentation.png>] [95 <./figures/xpertedit-cfp- chromophore-disulfide-bond-no-account-cross-links.png pdfTeX warning: /usr/bin/pdflatex (file ./figures/xpertedit-cfp-chromophore-dis ulfide-bond-no-account-cross-links.png): large interlaced PNG might cause out o f memory (use non-interlaced PNG to fix this) >] [96 <./figures/xpertedit-cfp-chromophore-disulfide-bond-account-cross-links. png>] [97 <./figures/xpertedit-fragmentation-cross-linked-oligomer.png>] Overfull \hbox (4.71663pt too wide) in paragraph at lines 1536--1538 []\T1/aer/m/n/10 Fragments 15$\OMS/cmsy/m/n/10 $ \T1/aer/m/n/10 and 16$\OMS/cm sy/m/n/10 $ \T1/aer/m/n/10 ac-count for all the cross-links of the oligomer. [98] [99 <./figures/xpertedit-mass-sear ch.png>] [100 <./figures/xpertedit-f iltering-oligomer-data.png>] [101] [102 <./figures/xpertedit-mz-rat io-calculator.png> <./figures/xpertedit-compositions.png>] [103] [104 <./figures/protein -monomer-acidobasic-data.png>] [105] [106] Overfull \hbox (5.1574pt too wide) in paragraph at lines 1969--1975 [][]\T1/aett/m/n/10 left_trapped \T1/aer/m/n/10 This el-e-me nt in-di-cates that the chem- Overfull \hbox (11.92708pt too wide) in paragraph at lines 1991--1999 [][]\T1/aett/m/n/10 LOST \T1/aer/m/n/10 This el-e-ment ac-tu -ally in-di-cates what should [107] [108] [109 <./figures/xpertedit-net- charge-pka-ph-pi.png>] [110]) (./xpertminer.tex Chapter 9. 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[119] Overfull \hbox (14.57152pt too wide) in paragraph at lines 98--102 []\T1/aett/m/n/10 monomer_dictionary\T1/aer/m/n/10 : file es-tab-lish-ing the r e-la-tion-ship be-tween any monomer [120] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # between the codes of each monomer and their graphic file (p ixmap[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] [121] [122 <./figures/pol-chem-defs-directory-protein-and-saccharide.png (PNG c opy)>] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # This is the modification_dictionary file where the correspo ndences[] Overfull \hbox (21.79932pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # between the name of each modification and their graphic fil e (pixmap[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # sequence editor are made. Also, the graphical operation tha t is to[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # be performed upon chemical modification of a monomer is lis ted ('T'[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # for transparent and 'O' for opaque). See the manual for det ails.[] [123] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # where Phosphorylation is the name of the modification. T in dicates[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # process (O indicates that the visual rendering of the modif ication[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] Overfull \hbox (82.5854pt too wide) in paragraph at lines 272--283 \T1/aer/m/n/10 listed in the file for the mod-i-fi-ca-tion. This is vis-i-ble i n the []\T1/aett/m/n/10 AmidationGlu\%O\%glutamine.svg Overfull \hbox (13.91695pt too wide) in paragraph at lines 284--293 \T1/aer/m/n/10 the ``Phos-pho-ry-la-tion'' mod-i-fi-ca-tion (line []\T1/aett/m/ n/10 Phosphorylation%T%phospho.svg\T1/aer/m/n/10 ), [124] LaTeX Font Warning: Font shape `T1/aett/bx/n' undefined (Font) using `T1/aett/m/n' instead on input line 337. Overfull \hbox (36.91821pt too wide) in paragraph at lines 347--352 \T1/aer/m/n/10 lo-cated in the \T1/aett/m/n/10 dna \T1/aer/m/n/10 di-rec-tory, it-self lo-cated in the \T1/aett/m/n/10 /path/to/definition/directory ) (./appendices.tex [125] [126] Chapter 11. (./protein-1-letter.xml.tex Overfull \hbox (12.51198pt too wide) in paragraph at lines 2--2 [][]\T1/aer/m/sc/20.74 The Pro-tein Chem-istry Def-i-ni-tion Overfull \hbox (11.31934pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (278.55884pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] [127] Overfull \hbox (37.51929pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] Overfull \hbox (89.91919pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154]) [155] (./leu-enkephalin.mxp.tex Overfull \hbox (11.31934pt too wide) in paragraph at lines 52--52 []\T1/aett/m/n/10 Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (168.51904pt too wide) in paragraph at lines 52--52 []\T1/aett/m/n/10 [] ) [156] (./pka_ph_pi.xml.tex Overfull \hbox (11.31934pt too wide) in paragraph at lines 526--526 []\T1/aett/m/n/10 Copyright 2003 2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 526--526 []\T1/aett/m/n/10 [] Underfull \vbox (badness 10000) has occurred while \output is active [157] [158] [159] [160] [161] [162] [163] [164] [165] [166]) [167] (./GNU-GPL-3.0.tex Overfull \hbox (17.38269pt too wide) in paragraph at lines 2--2 [][]\T1/aer/m/sc/20.74 GNU Gen-eral Pub-lic Li-cense Text [168] [169] [170] [171] [172] [173] [174] [175] Overfull \hbox (1.69012pt too wide) in paragraph at lines 512--516 []\T1/aer/m/n/10 Each con-trib-u-tor grants you a non-exclusive, world-wide, ro yalty-free patent [176] [177] Overfull \hbox (6.92036pt too wide) in paragraph at lines 616--625 \T1/aer/m/n/10 STATED IN WRIT-ING THE COPY-RIGHT HOLD-ERS AND/OR OTHER Overfull \hbox (2.58072pt too wide) in paragraph at lines 616--625 \T1/aer/m/n/10 PAR-TIES PRO-VIDE THE PRO-GRAM ``AS IS'' WITH-OUT WAR-RANTY Overfull \hbox (18.23813pt too wide) in paragraph at lines 628--638 []\T1/aer/m/n/10 IN NO EVENT UN-LESS RE-QUIRED BY AP-PLI-CA-BLE LAW OR AGREED Overfull \hbox (5.53944pt too wide) in paragraph at lines 628--638 \T1/aer/m/n/10 TO IN WRIT-ING WILL ANY COPY-RIGHT HOLDER, OR ANY OTHER Overfull \hbox (9.5637pt too wide) in paragraph at lines 628--638 \T1/aer/m/n/10 CLUD-ING ANY GEN-ERAL, SPE-CIAL, IN-CI-DEN-TAL OR CON-SE-QUEN- [178] Overfull \hbox (35.02808pt too wide) in paragraph at lines 679--682 \T1/aer/m/n/10 cense along with this pro-gram. If not, see http://www.gnu.org/l icenses/. ) [179] [180]) (./index.tex No file massxpert.ind. ) (./massxpert.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on massxpert.pdf (196 pages, 10095184 bytes). Transcript written on massxpert.log. cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E chdir /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual /usr/bin/makeindex massxpert.idx This is makeindex, version 2.15 [TeX Live 2012] (kpathsea + Thai support). Scanning input file massxpert.idx....done (186 entries accepted, 0 rejected). Sorting entries.....done (1572 comparisons). Generating output file massxpert.ind....done (233 lines written, 0 warnings). Output written in massxpert.ind. Transcript written in massxpert.ilg. cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E chdir /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual /usr/bin/pdflatex -interaction=nonstopmode massxpert.tex This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/Debian) restricted \write18 enabled. entering extended mode (./massxpert.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. 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Overfull \hbox (8.38528pt too wide) in paragraph at lines 38--42 \T1/aer/m/n/10 fully pro-grammable (that's the \T1/aer/m/sl/10 Xpert-Calc \T1/a er/m/n/10 mod-ule also part of the \T1/aer/m/sl/10 massXpert [1] [2] Overfull \hbox (10.50308pt too wide) in paragraph at lines 168--168 [][][]\T1/aer/m/sc/20.74 Program Avail-abil-ity, Tech-ni-cal- [3] Underfull \hbox (badness 10000) in paragraph at lines 196--201 Overfull \hbox (4.74527pt too wide) in paragraph at lines 212--214 []\T1/aer/m/n/10 The \T1/aer/m/sl/10 Xpert-Def \T1/aer/m/n/10 mod-ule (def-i-ni -tion of atoms and of new poly-mer chemistries); [4] [5] Overfull \hbox (19.99072pt too wide) in paragraph at lines 266--270 []\T1/aer/m/n/10 The gen-eral pol-icy for di-rect-ing ques-tions, com-ments, fe a-ture re-quests, \T1/aer/m/sl/10 massXpert Overfull \hbox (6.16531pt too wide) in paragraph at lines 266--270 \T1/aer/m/n/10 pro-gram and/or \T1/aer/m/sl/10 massXpert \T1/aer/m/n/10 doc-u-m en-ta-tion bug re-ports[] should be self-explanatory Underfull \hbox (badness 10000) in paragraph at lines 275--277 [6 <./figures/addresses.png>]) (./installation.tex Chapter 2. Underfull \hbox (badness 10000) in paragraph at lines 5--8 [7] Underfull \hbox (badness 10000) in paragraph at lines 86--88 [8] Overfull \hbox (9.62535pt too wide) in paragraph at lines 194--199 \T1/aer/m/n/10 At this point the soft-ware should have in-stalled in the des-ti -na-tion tree (\T1/aett/m/n/10 /usr/local [9] [10] Underfull \hbox (badness 1406) in paragraph at lines 347--347 []\T1/aer/m/n/10 Figure 2.1: []\T1/aer/bx/sl/10 massXpert \T1/aer/bx/n/10 con-f ig-u-ra-tion set-tings. \T1/aer/m/n/10 Upon run-ning the Underfull \hbox (badness 10000) in paragraph at lines 351--362 [11] [12 <./figures/massxpert-configuration-settings-dlg.png>] [13] [14]) (./basics-polchem.tex Chapter 3. Overfull \hbox (1.969pt too wide) in paragraph at lines 13--13 [][][]\T1/aer/m/sc/20.74 Polymers? Where? Ev-ery-where![] Overfull \hbox (7.65761pt too wide) in paragraph at lines 26--31 \T1/aer/m/it/10 molecules which are them-selves made from com-bi-na-tions of sm all sim-ple molecules\T1/aer/m/n/10 . [15] Underfull \vbox (badness 6876) has occurred while \output is active [16] [17 <./figures/peptbond-formation.png>] [18 <./figures/prot-polymer.png>] [19 <./figures/nucacbond-formation.png>] [20 <./figures/nucac-polymer.png>] [21 <./figures/sacchbond-formation.png> <./figu res/sacch-polymer.png>] [22] [23] [24 <./figures/prot-cleavage.png>] [25] [26] [27 <./figures/prot-fragmentation.png >] Overfull \hbox (1.18713pt too wide) in paragraph at lines 735--736 []\T1/aer/bx/it/10 b \T1/aer/bx/n/10 frag-ment se-ries[] \T1/aer/m/n/10 Sim-i- larly, the mass cal-cu-la-tion is math-e-mat-i-cally ex-pressed [28] Overfull \hbox (9.24484pt too wide) in paragraph at lines 761--772 \T1/aer/m/n/10 sense that they do not hold nei-ther of the two pre-cur-sor poly -mer's ends. \T1/aer/m/sl/10 massXpert [29] [30 <./figures/dna-fragmentation.png>] [31] Overfull \hbox (2.33554pt too wide) in paragraph at lines 893--895 \T1/aer/m/n/10 To sum up all what we have seen so far with poly-mer chain dis-r upt-ing chemistries: Overfull \hbox (7.70595pt too wide) in paragraph at lines 914--917 []\T1/aer/m/n/10 Fragments are never ion-ized au-to-mat-i-cally; ion-iza-tion ( gain/loss of a charged [32]) (./basics-massspec.tex Chapter 4. Underfull \vbox (badness 1033) has occurred while \output is active [33] [34] [35] Underfull \hbox (badness 10000) in paragraph at lines 174--176 Underfull \hbox (badness 10000) in paragraph at lines 197--199 [36] [37] [38]) (./generalities.tex Chapter 5. [39] [40] [41] [42]) (./xpertdef.tex Chapter 6. (/usr/share/texlive/texmf-dist/tex/latex/ae/t1aess.fd) [43] LaTeX Warning: `!h' float specifier changed to `!ht'. [44 <./figures/select-pol-chem-def.png (PNG co py)>] [45 <./figures/xpertdef-pol-chem-def.png>] [46 <./figures/xpertdef-atoms. png>] [47 <./figures/xpertdef-monomers.png>] Overfull \hbox (5.29686pt too wide) in paragraph at lines 297--306 \T1/aer/m/n/10 Polymer are of-ten ei-ther chem-i-cally or bio-chem-i-cally mod- i-fied. In na-ture, biopoly- [48 <./figures/xpertdef-monomers-mass- differences.png>] [49 <./figures/xpertdef-modifications.p ng>] [50 <./figures/xpertdef-crosslinkers.png>] [51 <./figures/xpertdef-cleavages.png>] Overfull \hbox (0.41591pt too wide) in paragraph at lines 547--562 \T1/aer/m/n/10 cleav-age spec-i-fi-ca-tion for ``CyanogenBromide''---that the o ligomers re-sult-ing from [52] Underfull \vbox (badness 10000) has occurred while \output is active [53 <./fig ures/xpertdef-fragmentations-simplest.png>] Underfull \hbox (badness 10000) in paragraph at lines 635--639 [54] [55 <./f igures/xpertdef-fragmentations-special-dna-a-base-case.png>] [56 <./figures/xpertde f-fragmentations-frag-rules.png>] Underfull \hbox (badness 10000) in paragraph at lines 747--758 Underfull \hbox (badness 10000) in paragraph at lines 782--790 [57] [58]) (./xpertcalc.tex Chapter 7. 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Underfull \vbox (badness 10000) has occurred while \output is active [69] Overfull \hbox (0.13066pt too wide) in paragraph at lines 32--32 [][][]\T1/aer/m/sl/20.74 XpertEdit \T1/aer/m/sc/20.74 Op-er-a-tion: \T1/aer/m/i t/20.74 In Me-dias Res[] [70 <./figures/xpertedit-sel ect-sample-sequence.png (PNG copy)>] [71 <./figures/xpertedit-choose-p ol-chem-def.png>] [72 <./figures/xpertedit-protein-main-view.png>] [73] Overfull \hbox (20.56702pt too wide) in paragraph at lines 362--365 []\T1/aer/m/sl/10 Chemistry[] \T1/aer/m/n/10 Cal-cu-late the monomeric/element [74] [75 <./figures/xpertedit-file-m enu.png> <./figures/xpertedit-chemistry-menu.png>] Overfull \hbox (4.06323pt too wide) in paragraph at lines 435--436 [] [76 <./figures/xpertedit-3-letter-code-whole-process.png>] [77] [78 <./figures/xp ertedit-sequence-editor-bad-char.png>] [79 <./figures/xpertedit-find-seq uence-dlg.png>] Underfull \vbox (badness 1297) has occurred while \output is active [80 <./figu res/xpertedit-sequence-editor-sequence-import-errors-first.png>] Underfull \hbox (badness 10000) in paragraph at lines 728--730 [81 <./figures/xpertedit-sequence-editor-sequence-import-errors-second.png>] Underfull \hbox (badness 10000) in paragraph at lines 770--781 [82] [83] Underfull \vbox (badness 1584) has occurred while \output is active [84 <./figu res/xpertedit-modify-monomer.png>] Underfull \vbox (badness 10000) has occurred while \output is active [85 <./fig ures/xpertedit-modify-monomer-manually-defined-modif.png>] [86 <./figures/xpertedit-modify-poly mer.png>] [87 <./figures/xpertedit-cros s-link-monomers.png>] [88 <./figures/xpertedit-cross-linked-mon omers.png>] [89 <./figures/xpertedit-cleavages.png>] [90] [91 <./figures/xpertedit-spectrum-creation-from-cleavages.png>] [92 <./figur es/xpertedit-spectrum-simulation-cleavage-oligomers.png>] [93] [94 <./figures/xpertedit-fragmentation.png>] [95 <./figures/xpertedit-cfp- chromophore-disulfide-bond-no-account-cross-links.png pdfTeX warning: /usr/bin/pdflatex (file ./figures/xpertedit-cfp-chromophore-dis ulfide-bond-no-account-cross-links.png): large interlaced PNG might cause out o f memory (use non-interlaced PNG to fix this) >] [96 <./figures/xpertedit-cfp-chromophore-disulfide-bond-account-cross-links. png>] [97 <./figures/xpertedit-fragmentation-cross-linked-oligomer.png>] Overfull \hbox (4.71663pt too wide) in paragraph at lines 1536--1538 []\T1/aer/m/n/10 Fragments 15$\OMS/cmsy/m/n/10 $ \T1/aer/m/n/10 and 16$\OMS/cm sy/m/n/10 $ \T1/aer/m/n/10 ac-count for all the cross-links of the oligomer. [98] [99 <./figures/xpertedit-mass-sear ch.png>] [100 <./figures/xpertedit-f iltering-oligomer-data.png>] [101] [102 <./figures/xpertedit-mz-rat io-calculator.png> <./figures/xpertedit-compositions.png>] [103] [104 <./figures/protein -monomer-acidobasic-data.png>] [105] [106] Overfull \hbox (5.1574pt too wide) in paragraph at lines 1969--1975 [][]\T1/aett/m/n/10 left_trapped \T1/aer/m/n/10 This el-e-me nt in-di-cates that the chem- Overfull \hbox (11.92708pt too wide) in paragraph at lines 1991--1999 [][]\T1/aett/m/n/10 LOST \T1/aer/m/n/10 This el-e-ment ac-tu -ally in-di-cates what should [107] [108] [109 <./figures/xpertedit-net- charge-pka-ph-pi.png>] [110]) (./xpertminer.tex Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 5--10 [111] [112 <./figures/xpertminer-mzl ab-wnd.png (PNG copy)>] [113 <./figures/xpertminer-empty-input-mz-list.png>] [114 <./figures/xp ertminer-filled-input-mz-list.png>] [115 <./figures/xpertminer-mz-only-filled-i nput-mz-list.png> <./figures/xpertminer-mz-z-filled-input-mz-list.png>] [116] [117] [118 <./figures/ xpertminer-mz-z-filled-output-mz-list.png>]) (./data-customization.tex Chapter 10. [119] Overfull \hbox (14.57152pt too wide) in paragraph at lines 98--102 []\T1/aett/m/n/10 monomer_dictionary\T1/aer/m/n/10 : file es-tab-lish-ing the r e-la-tion-ship be-tween any monomer [120] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # between the codes of each monomer and their graphic file (p ixmap[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] [121] [122 <./figures/pol-chem-defs-directory-protein-and-saccharide.png (PNG c opy)>] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # This is the modification_dictionary file where the correspo ndences[] Overfull \hbox (21.79932pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # between the name of each modification and their graphic fil e (pixmap[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # sequence editor are made. Also, the graphical operation tha t is to[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # be performed upon chemical modification of a monomer is lis ted ('T'[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # for transparent and 'O' for opaque). See the manual for det ails.[] [123] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # where Phosphorylation is the name of the modification. T in dicates[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # process (O indicates that the visual rendering of the modif ication[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] Overfull \hbox (82.5854pt too wide) in paragraph at lines 272--283 \T1/aer/m/n/10 listed in the file for the mod-i-fi-ca-tion. 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(./protein-1-letter.xml.tex Overfull \hbox (12.51198pt too wide) in paragraph at lines 2--2 [][]\T1/aer/m/sc/20.74 The Pro-tein Chem-istry Def-i-ni-tion Overfull \hbox (11.31934pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (278.55884pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] [127] Overfull \hbox (37.51929pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] Overfull \hbox (89.91919pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154]) [155] (./leu-enkephalin.mxp.tex Overfull \hbox (11.31934pt too wide) in paragraph at lines 52--52 []\T1/aett/m/n/10 Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (168.51904pt too wide) in paragraph at lines 52--52 []\T1/aett/m/n/10 [] ) [156] (./pka_ph_pi.xml.tex Overfull \hbox (11.31934pt too wide) in paragraph at lines 526--526 []\T1/aett/m/n/10 Copyright 2003 2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 526--526 []\T1/aett/m/n/10 [] Underfull \vbox (badness 10000) has occurred while \output is active [157] [158] [159] [160] [161] [162] [163] [164] [165] [166]) [167] (./GNU-GPL-3.0.tex Overfull \hbox (17.38269pt too wide) in paragraph at lines 2--2 [][]\T1/aer/m/sc/20.74 GNU Gen-eral Pub-lic Li-cense Text [168] [169] [170] [171] [172] [173] [174] [175] Overfull \hbox (1.69012pt too wide) in paragraph at lines 512--516 []\T1/aer/m/n/10 Each con-trib-u-tor grants you a non-exclusive, world-wide, ro yalty-free patent [176] [177] Overfull \hbox (6.92036pt too wide) in paragraph at lines 616--625 \T1/aer/m/n/10 STATED IN WRIT-ING THE COPY-RIGHT HOLD-ERS AND/OR OTHER Overfull \hbox (2.58072pt too wide) in paragraph at lines 616--625 \T1/aer/m/n/10 PAR-TIES PRO-VIDE THE PRO-GRAM ``AS IS'' WITH-OUT WAR-RANTY Overfull \hbox (18.23813pt too wide) in paragraph at lines 628--638 []\T1/aer/m/n/10 IN NO EVENT UN-LESS RE-QUIRED BY AP-PLI-CA-BLE LAW OR AGREED Overfull \hbox (5.53944pt too wide) in paragraph at lines 628--638 \T1/aer/m/n/10 TO IN WRIT-ING WILL ANY COPY-RIGHT HOLDER, OR ANY OTHER Overfull \hbox (9.5637pt too wide) in paragraph at lines 628--638 \T1/aer/m/n/10 CLUD-ING ANY GEN-ERAL, SPE-CIAL, IN-CI-DEN-TAL OR CON-SE-QUEN- [178] Overfull \hbox (35.02808pt too wide) in paragraph at lines 679--682 \T1/aer/m/n/10 cense along with this pro-gram. If not, see http://www.gnu.org/l icenses/. ) [179] [180]) (./index.tex (./massxpert.ind [181] [182] [183])) (./massxpert.aux) Package rerunfilecheck Warning: File `massxpert.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on massxpert.pdf (199 pages, 10105974 bytes). Transcript written on massxpert.log. cd /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual && /usr/bin/cmake -E chdir /build/buildd/massxpert-3.2.2/debian/build-indep/usermanual /usr/bin/pdflatex -interaction=nonstopmode massxpert.tex This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/Debian) restricted \write18 enabled. entering extended mode (./massxpert.tex LaTeX2e <2011/06/27> Babel and hyphenation patterns for english, dumylang, nohyphenation, lo aded. 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[15] Underfull \vbox (badness 6876) has occurred while \output is active [16] [17 <./figures/peptbond-formation.png>] [18 <./figures/prot-polymer.png>] [19 <./figures/nucacbond-formation.png>] [20 <./figures/nucac-polymer.png>] [21 <./figures/sacchbond-formation.png> <./figu res/sacch-polymer.png>] [22] [23] [24 <./figures/prot-cleavage.png>] [25] [26] [27 <./figures/prot-fragmentation.png >] Overfull \hbox (1.18713pt too wide) in paragraph at lines 735--736 []\T1/aer/bx/it/10 b \T1/aer/bx/n/10 frag-ment se-ries[] \T1/aer/m/n/10 Sim-i- larly, the mass cal-cu-la-tion is math-e-mat-i-cally ex-pressed [28] Overfull \hbox (9.24484pt too wide) in paragraph at lines 761--772 \T1/aer/m/n/10 sense that they do not hold nei-ther of the two pre-cur-sor poly -mer's ends. \T1/aer/m/sl/10 massXpert [29] [30 <./figures/dna-fragmentation.png>] [31] Overfull \hbox (2.33554pt too wide) in paragraph at lines 893--895 \T1/aer/m/n/10 To sum up all what we have seen so far with poly-mer chain dis-r upt-ing chemistries: Overfull \hbox (7.70595pt too wide) in paragraph at lines 914--917 []\T1/aer/m/n/10 Fragments are never ion-ized au-to-mat-i-cally; ion-iza-tion ( gain/loss of a charged [32]) (./basics-massspec.tex Chapter 4. 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Underfull \hbox (badness 10000) in paragraph at lines 5--10 [111] [112 <./figures/xpertminer-mzl ab-wnd.png (PNG copy)>] [113 <./figures/xpertminer-empty-input-mz-list.png>] [114 <./figures/xp ertminer-filled-input-mz-list.png>] [115 <./figures/xpertminer-mz-only-filled-i nput-mz-list.png> <./figures/xpertminer-mz-z-filled-input-mz-list.png>] [116] [117] [118 <./figures/ xpertminer-mz-z-filled-output-mz-list.png>]) (./data-customization.tex Chapter 10. [119] Overfull \hbox (14.57152pt too wide) in paragraph at lines 98--102 []\T1/aett/m/n/10 monomer_dictionary\T1/aer/m/n/10 : file es-tab-lish-ing the r e-la-tion-ship be-tween any monomer [120] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # between the codes of each monomer and their graphic file (p ixmap[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 208--208 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] [121] [122 <./figures/pol-chem-defs-directory-protein-and-saccharide.png (PNG c opy)>] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # The "massXpert" project is released ---in its entirety--- u nder the[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # GNU General Public License and was started (in the form of the GNU[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Scientifique (FRANCE), that granted me the formal authoriza tion to[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # This is the modification_dictionary file where the correspo ndences[] Overfull \hbox (21.79932pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # between the name of each modification and their graphic fil e (pixmap[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # sequence editor are made. Also, the graphical operation tha t is to[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # be performed upon chemical modification of a monomer is lis ted ('T'[] Overfull \hbox (0.83936pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # for transparent and 'O' for opaque). See the manual for det ails.[] [123] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # where Phosphorylation is the name of the modification. T in dicates[] Overfull \hbox (11.31934pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # process (O indicates that the visual rendering of the modif ication[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 265--265 []\T1/aett/m/n/10 # Each line starting with a '#' character is a comment and is ignored[] Overfull \hbox (82.5854pt too wide) in paragraph at lines 272--283 \T1/aer/m/n/10 listed in the file for the mod-i-fi-ca-tion. This is vis-i-ble i n the []\T1/aett/m/n/10 AmidationGlu\%O\%glutamine.svg Overfull \hbox (13.91695pt too wide) in paragraph at lines 284--293 \T1/aer/m/n/10 the ``Phos-pho-ry-la-tion'' mod-i-fi-ca-tion (line []\T1/aett/m/ n/10 Phosphorylation%T%phospho.svg\T1/aer/m/n/10 ), [124] LaTeX Font Warning: Font shape `T1/aett/bx/n' undefined (Font) using `T1/aett/m/n' instead on input line 337. Overfull \hbox (36.91821pt too wide) in paragraph at lines 347--352 \T1/aer/m/n/10 lo-cated in the \T1/aett/m/n/10 dna \T1/aer/m/n/10 di-rec-tory, it-self lo-cated in the \T1/aett/m/n/10 /path/to/definition/directory ) (./appendices.tex [125] [126] Chapter 11. (./protein-1-letter.xml.tex Overfull \hbox (12.51198pt too wide) in paragraph at lines 2--2 [][]\T1/aer/m/sc/20.74 The Pro-tein Chem-istry Def-i-ni-tion Overfull \hbox (11.31934pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (278.55884pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] [127] Overfull \hbox (37.51929pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] Overfull \hbox (89.91919pt too wide) in paragraph at lines 1422--1422 []\T1/aett/m/n/10 [] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154]) [155] (./leu-enkephalin.mxp.tex Overfull \hbox (11.31934pt too wide) in paragraph at lines 52--52 []\T1/aett/m/n/10 Copyright 2006,2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (168.51904pt too wide) in paragraph at lines 52--52 []\T1/aett/m/n/10 [] ) [156] (./pka_ph_pi.xml.tex Overfull \hbox (11.31934pt too wide) in paragraph at lines 526--526 []\T1/aett/m/n/10 Copyright 2003 2007 Filippo Rusconi - Licensed under the GNU GPL -->[] Overfull \hbox (16.55933pt too wide) in paragraph at lines 526--526 []\T1/aett/m/n/10 [] Underfull \vbox (badness 10000) has occurred while \output is active [157] [158] [159] [160] [161] [162] [163] [164] [165] [166]) [167] (./GNU-GPL-3.0.tex Overfull \hbox (17.38269pt too wide) in paragraph at lines 2--2 [][]\T1/aer/m/sc/20.74 GNU Gen-eral Pub-lic Li-cense Text [168] [169] [170] [171] [172] [173] [174] [175] Overfull \hbox (1.69012pt too wide) in paragraph at lines 512--516 []\T1/aer/m/n/10 Each con-trib-u-tor grants you a non-exclusive, world-wide, ro yalty-free patent [176] [177] Overfull \hbox (6.92036pt too wide) in paragraph at lines 616--625 \T1/aer/m/n/10 STATED IN WRIT-ING THE COPY-RIGHT HOLD-ERS AND/OR OTHER Overfull \hbox (2.58072pt too wide) in paragraph at lines 616--625 \T1/aer/m/n/10 PAR-TIES PRO-VIDE THE PRO-GRAM ``AS IS'' WITH-OUT WAR-RANTY Overfull \hbox (18.23813pt too wide) in paragraph at lines 628--638 []\T1/aer/m/n/10 IN NO EVENT UN-LESS RE-QUIRED BY AP-PLI-CA-BLE LAW OR AGREED Overfull \hbox (5.53944pt too wide) in paragraph at lines 628--638 \T1/aer/m/n/10 TO IN WRIT-ING WILL ANY COPY-RIGHT HOLDER, OR ANY OTHER Overfull \hbox (9.5637pt too wide) in paragraph at lines 628--638 \T1/aer/m/n/10 CLUD-ING ANY GEN-ERAL, SPE-CIAL, IN-CI-DEN-TAL OR CON-SE-QUEN- [178] Overfull \hbox (35.02808pt too wide) in paragraph at lines 679--682 \T1/aer/m/n/10 cense along with this pro-gram. If not, see http://www.gnu.org/l icenses/. ) [179] [180]) (./index.tex (./massxpert.ind [181] [182] [183])) (./massxpert.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on massxpert.pdf (199 pages, 10105980 bytes). Transcript written on massxpert.log. make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-indep' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 [100%] Built target pdf make[2]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-indep' /usr/bin/cmake -E cmake_progress_start /build/buildd/massxpert-3.2.2/debian/build-indep/CMakeFiles 0 make[1]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-indep' touch build-indep-stamp dh_testdir dh_prep -a rm -f debian/massxpert.substvars rm -f debian/massxpert.*.debhelper rm -rf debian/massxpert/ rm -f debian/massxpert-dbg.substvars rm -f debian/massxpert-dbg.*.debhelper rm -rf debian/massxpert-dbg/ rm -rf /build/buildd/massxpert-3.2.2/debian/tmp-arch mkdir -p /build/buildd/massxpert-3.2.2/debian/build-arch cd /build/buildd/massxpert-3.2.2/debian/build-arch && \ /usr/bin/cmake -D CMAKE_BUILD_TYPE=debug \ -D BUILD_PROGRAM=1 \ -D BUILD_DATA=0 \ -D BUILD_USERMANUAL=0 \ -D CMAKE_INSTALL_PREFIX=/usr ../.. -- The C compiler identification is GNU 4.7.0 -- The CXX compiler identification is GNU 4.7.0 -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Looking for Q_WS_X11 -- Looking for Q_WS_X11 - found -- Looking for Q_WS_WIN -- Looking for Q_WS_WIN - not found. -- Looking for Q_WS_QWS -- Looking for Q_WS_QWS - not found. -- Looking for Q_WS_MAC -- Looking for Q_WS_MAC - not found. -- Found Qt4: /usr/bin/qmake (found suitable version "4.8.1", required is "4.4.0") -- QTVERSION:4.8.1 ~~~~~~~~~~~~~~~~~~~~~~~~ SUMMARY ~~~~~~~~~~~~~~~~~~~~~~~~ -- BUILD_PROGRAM:1 -- BUILD_DATA:0 -- BUILD_USERMANUAL:0 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -- TARGET: massxpert--VERSION: 3.2.2 -- CMAKE_INSTALL_PREFIX: /usr -- MASSXPERT_BIN_DIR: /usr/bin -- MASSXPERT_DATA_DIR: /usr/share/massxpert -- MASSXPERT_PLUGIN_DIR: /usr/lib/massxpert/plugins -- MASSXPERT_LOCALE_DIR: /usr/share/massxpert/locales -- MASSXPERT_DOC_DIR: /usr/share/doc/massxpert -- MASSXPERT_USERMAN_DIR: /usr/share/doc/massxpert/usermanual ~~~~~~~~~~~~~~~~~~~~~~~~ SUMMARY ~~~~~~~~~~~~~~~~~~~~~~~~ -- Configuring done -- Generating done -- Build files have been written to: /build/buildd/massxpert-3.2.2/debian/build-arch /usr/bin/make -C /build/buildd/massxpert-3.2.2/debian/build-arch make[1]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -H/build/buildd/massxpert-3.2.2 -B/build/buildd/massxpert-3.2.2/debian/build-arch --check-build-system CMakeFiles/Makefile.cmake 0 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/build/buildd/massxpert-3.2.2/lib/chemEntVignette.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 1%] Generating moc_chemEntVignetteRenderer.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/lib && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/lib/moc_chemEntVignetteRenderer.cxx /build/buildd/massxpert-3.2.2/lib/chemEntVignetteRenderer.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 26 [ 2%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 3 [ 3%] Generating moc_crossLinkList.cxx Generating moc_atomDefDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_atomDefDlg.cxx /build/buildd/massxpert-3.2.2/gui/atomDefDlg.hpp cd /build/buildd/massxpert-3.2.2/debian/build-arch/lib && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/lib/moc_crossLinkList.cxx /build/buildd/massxpert-3.2.2/lib/crossLinkList.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 3%] Generating moc_calculatorChemPadDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_calculatorChemPadDlg.cxx /build/buildd/massxpert-3.2.2/gui/calculatorChemPadDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 3%] [ 3%] Generating moc_isotopicPatternCalculator.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/lib && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/lib/moc_isotopicPatternCalculator.cxx /build/buildd/massxpert-3.2.2/lib/isotopicPatternCalculator.hpp Generating moc_calculatorChemPadGroupBox.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_calculatorChemPadGroupBox.cxx /build/buildd/massxpert-3.2.2/gui/calculatorChemPadGroupBox.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 27 [ 4%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles Generating moc_calculatorRecorderDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_calculatorRecorderDlg.cxx /build/buildd/massxpert-3.2.2/gui/calculatorRecorderDlg.hpp [ 4%] Generating moc_oligomerList.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/lib && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/lib/moc_oligomerList.cxx /build/buildd/massxpert-3.2.2/lib/oligomerList.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 4%] Generating moc_calculatorWnd.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_calculatorWnd.cxx /build/buildd/massxpert-3.2.2/gui/calculatorWnd.hpp cd /build/buildd/massxpert-3.2.2/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.2 /build/buildd/massxpert-3.2.2/lib /build/buildd/massxpert-3.2.2/debian/build-arch /build/buildd/massxpert-3.2.2/debian/build-arch/lib /build/buildd/massxpert-3.2.2/debian/build-arch/lib/CMakeFiles/masslib.dir/DependInfo.cmake --color= /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 4%] Generating moc_chemPadButton.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_chemPadButton.cxx /build/buildd/massxpert-3.2.2/gui/chemPadButton.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 28 [ 5%] Generating moc_cleavageDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 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cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_cleaveOligomerTableViewMimeData.cxx /build/buildd/massxpert-3.2.2/gui/cleaveOligomerTableViewMimeData.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 29 [ 6%] Generating moc_cleaveOligomerTableViewModel.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_cleaveOligomerTableViewModel.cxx /build/buildd/massxpert-3.2.2/gui/cleaveOligomerTableViewModel.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 6%] Generating moc_cleaveSpecDefDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_cleaveSpecDefDlg.cxx /build/buildd/massxpert-3.2.2/gui/cleaveSpecDefDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 6%] Scanning dependencies of target masslib make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/make -f lib/CMakeFiles/masslib.dir/build.make lib/CMakeFiles/masslib.dir/build Generating moc_compositionsDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_compositionsDlg.cxx /build/buildd/massxpert-3.2.2/gui/compositionsDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 30 [ 7%] make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' Generating moc_compositionTreeView.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_compositionTreeView.cxx /build/buildd/massxpert-3.2.2/gui/compositionTreeView.hpp [ 7%] Building CXX object lib/CMakeFiles/masslib.dir/atomCount.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/atomCount.cpp.o -c /build/buildd/massxpert-3.2.2/lib/atomCount.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 7%] Generating moc_compositionTreeViewModel.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_compositionTreeViewModel.cxx /build/buildd/massxpert-3.2.2/gui/compositionTreeViewModel.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 7%] Generating moc_configurationSettingsDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_configurationSettingsDlg.cxx /build/buildd/massxpert-3.2.2/gui/configurationSettingsDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 31 [ 8%] Generating moc_crossLinkerDefDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_crossLinkerDefDlg.cxx /build/buildd/massxpert-3.2.2/gui/crossLinkerDefDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 8%] Generating moc_decimalPlacesOptionsDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_decimalPlacesOptionsDlg.cxx /build/buildd/massxpert-3.2.2/gui/decimalPlacesOptionsDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 8%] Generating moc_fragmentationDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_fragmentationDlg.cxx /build/buildd/massxpert-3.2.2/gui/fragmentationDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 32 [ 9%] Generating moc_fragmentOligomerTableView.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_fragmentOligomerTableView.cxx /build/buildd/massxpert-3.2.2/gui/fragmentOligomerTableView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 9%] Generating moc_fragmentOligomerTableViewMimeData.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_fragmentOligomerTableViewMimeData.cxx /build/buildd/massxpert-3.2.2/gui/fragmentOligomerTableViewMimeData.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 9%] Generating moc_fragmentOligomerTableViewModel.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_fragmentOligomerTableViewModel.cxx /build/buildd/massxpert-3.2.2/gui/fragmentOligomerTableViewModel.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 33 [ 10%] Generating moc_fragSpecDefDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_fragSpecDefDlg.cxx /build/buildd/massxpert-3.2.2/gui/fragSpecDefDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 10%] Generating moc_mainWindow.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mainWindow.cxx /build/buildd/massxpert-3.2.2/gui/mainWindow.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 34 [ 11%] Generating moc_massSearchDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_massSearchDlg.cxx /build/buildd/massxpert-3.2.2/gui/massSearchDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 11%] Generating moc_massSearchOligomerTableView.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_massSearchOligomerTableView.cxx /build/buildd/massxpert-3.2.2/gui/massSearchOligomerTableView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 11%] Generating moc_massSearchOligomerTableViewMimeData.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_massSearchOligomerTableViewMimeData.cxx /build/buildd/massxpert-3.2.2/gui/massSearchOligomerTableViewMimeData.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 35 [ 12%] Generating moc_massSearchOligomerTableViewModel.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_massSearchOligomerTableViewModel.cxx /build/buildd/massxpert-3.2.2/gui/massSearchOligomerTableViewModel.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 12%] Generating moc_modifDefDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_modifDefDlg.cxx /build/buildd/massxpert-3.2.2/gui/modifDefDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 12%] Generating moc_monomerCodeEvaluator.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_monomerCodeEvaluator.cxx /build/buildd/massxpert-3.2.2/gui/monomerCodeEvaluator.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 36 [ 13%] Generating moc_monomerCrossLinkDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_monomerCrossLinkDlg.cxx /build/buildd/massxpert-3.2.2/gui/monomerCrossLinkDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 13%] Generating moc_monomerDefDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_monomerDefDlg.cxx /build/buildd/massxpert-3.2.2/gui/monomerDefDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 13%] Generating moc_monomerModificationDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_monomerModificationDlg.cxx /build/buildd/massxpert-3.2.2/gui/monomerModificationDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 37 [ 14%] Generating moc_mzCalculationDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mzCalculationDlg.cxx /build/buildd/massxpert-3.2.2/gui/mzCalculationDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 14%] Generating moc_mzCalculationTreeView.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mzCalculationTreeView.cxx /build/buildd/massxpert-3.2.2/gui/mzCalculationTreeView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 14%] Generating moc_mzCalculationTreeViewModel.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mzCalculationTreeViewModel.cxx /build/buildd/massxpert-3.2.2/gui/mzCalculationTreeViewModel.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 38 [ 15%] Generating moc_mzLabInputOligomerTableView.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mzLabInputOligomerTableView.cxx /build/buildd/massxpert-3.2.2/gui/mzLabInputOligomerTableView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 15%] Generating moc_mzLabInputOligomerTableViewDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mzLabInputOligomerTableViewDlg.cxx /build/buildd/massxpert-3.2.2/gui/mzLabInputOligomerTableViewDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 15%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 15%] Generating moc_mzLabInputOligomerTableViewModel.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mzLabInputOligomerTableViewModel.cxx /build/buildd/massxpert-3.2.2/gui/mzLabInputOligomerTableViewModel.hpp Building CXX object lib/CMakeFiles/masslib.dir/atom.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/atom.cpp.o -c /build/buildd/massxpert-3.2.2/lib/atom.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 39 [ 16%] Generating moc_mzLabOutputOligomerTableView.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mzLabOutputOligomerTableView.cxx /build/buildd/massxpert-3.2.2/gui/mzLabOutputOligomerTableView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 16%] Generating moc_mzLabOutputOligomerTableViewDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mzLabOutputOligomerTableViewDlg.cxx /build/buildd/massxpert-3.2.2/gui/mzLabOutputOligomerTableViewDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 16%] Generating moc_mzLabOutputOligomerTableViewModel.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mzLabOutputOligomerTableViewModel.cxx /build/buildd/massxpert-3.2.2/gui/mzLabOutputOligomerTableViewModel.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 40 [ 17%] Generating moc_mzLabWnd.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mzLabWnd.cxx /build/buildd/massxpert-3.2.2/gui/mzLabWnd.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 17%] Generating moc_pkaPhPiDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_pkaPhPiDlg.cxx /build/buildd/massxpert-3.2.2/gui/pkaPhPiDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 17%] Generating moc_polChemDefWnd.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_polChemDefWnd.cxx /build/buildd/massxpert-3.2.2/gui/polChemDefWnd.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 41 [ 18%] Generating moc_polymerModificationDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_polymerModificationDlg.cxx /build/buildd/massxpert-3.2.2/gui/polymerModificationDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 18%] Generating moc_sequenceEditorFindDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_sequenceEditorFindDlg.cxx /build/buildd/massxpert-3.2.2/gui/sequenceEditorFindDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 18%] Generating moc_sequenceEditorGraphicsView.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_sequenceEditorGraphicsView.cxx /build/buildd/massxpert-3.2.2/gui/sequenceEditorGraphicsView.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 42 [ 19%] Generating moc_sequenceEditorWnd.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_sequenceEditorWnd.cxx /build/buildd/massxpert-3.2.2/gui/sequenceEditorWnd.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 19%] Generating moc_sequenceImportDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_sequenceImportDlg.cxx /build/buildd/massxpert-3.2.2/gui/sequenceImportDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 19%] Generating moc_sequencePurificationDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_sequencePurificationDlg.cxx /build/buildd/massxpert-3.2.2/gui/sequencePurificationDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 43 [ 20%] Generating moc_spectrumCalculationDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_spectrumCalculationDlg.cxx /build/buildd/massxpert-3.2.2/gui/spectrumCalculationDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 20%] Generating ui_aboutDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_aboutDlg.h /build/buildd/massxpert-3.2.2/gui/ui/aboutDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 20%] Generating ui_atomDefDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_atomDefDlg.h /build/buildd/massxpert-3.2.2/gui/ui/atomDefDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 44 [ 21%] Generating ui_calculatorChemPadDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_calculatorChemPadDlg.h /build/buildd/massxpert-3.2.2/gui/ui/calculatorChemPadDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 21%] Generating ui_calculatorRecorderDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_calculatorRecorderDlg.h /build/buildd/massxpert-3.2.2/gui/ui/calculatorRecorderDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 45 [ 22%] Generating ui_calculatorWnd.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_calculatorWnd.h /build/buildd/massxpert-3.2.2/gui/ui/calculatorWnd.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 22%] Generating ui_cleavageDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_cleavageDlg.h /build/buildd/massxpert-3.2.2/gui/ui/cleavageDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 22%] Generating ui_cleaveSpecDefDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_cleaveSpecDefDlg.h /build/buildd/massxpert-3.2.2/gui/ui/cleaveSpecDefDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 46 [ 23%] Generating ui_compositionsDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_compositionsDlg.h /build/buildd/massxpert-3.2.2/gui/ui/compositionsDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 23%] Generating ui_configurationSettingsDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_configurationSettingsDlg.h /build/buildd/massxpert-3.2.2/gui/ui/configurationSettingsDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 23%] Generating ui_crossLinkerDefDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_crossLinkerDefDlg.h /build/buildd/massxpert-3.2.2/gui/ui/crossLinkerDefDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 47 [ 24%] Generating ui_fragmentationDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_fragmentationDlg.h /build/buildd/massxpert-3.2.2/gui/ui/fragmentationDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 24%] Generating ui_fragSpecDefDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_fragSpecDefDlg.h /build/buildd/massxpert-3.2.2/gui/ui/fragSpecDefDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 24%] Generating ui_decimalPlacesOptionsDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_decimalPlacesOptionsDlg.h /build/buildd/massxpert-3.2.2/gui/ui/decimalPlacesOptionsDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 48 [ 25%] Generating ui_massSearchDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_massSearchDlg.h /build/buildd/massxpert-3.2.2/gui/ui/massSearchDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 25%] Generating ui_modifDefDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_modifDefDlg.h /build/buildd/massxpert-3.2.2/gui/ui/modifDefDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 25%] Generating ui_monomerCrossLinkDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_monomerCrossLinkDlg.h /build/buildd/massxpert-3.2.2/gui/ui/monomerCrossLinkDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 49 [ 26%] Generating ui_monomerDefDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_monomerDefDlg.h /build/buildd/massxpert-3.2.2/gui/ui/monomerDefDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 26%] Generating ui_monomerModificationDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_monomerModificationDlg.h /build/buildd/massxpert-3.2.2/gui/ui/monomerModificationDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 26%] Generating ui_mzCalculationDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_mzCalculationDlg.h /build/buildd/massxpert-3.2.2/gui/ui/mzCalculationDlg.ui /usr/bin/cmake -E cmake_progress_report 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/build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 28%] Generating ui_polymerModificationDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_polymerModificationDlg.h /build/buildd/massxpert-3.2.2/gui/ui/polymerModificationDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 52 [ 29%] Generating ui_sequenceEditorFindDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_sequenceEditorFindDlg.h /build/buildd/massxpert-3.2.2/gui/ui/sequenceEditorFindDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 29%] Generating ui_sequenceEditorWnd.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_sequenceEditorWnd.h /build/buildd/massxpert-3.2.2/gui/ui/sequenceEditorWnd.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 29%] Generating ui_sequenceImportDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_sequenceImportDlg.h /build/buildd/massxpert-3.2.2/gui/ui/sequenceImportDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 53 [ 30%] Generating ui_sequencePurificationDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_sequencePurificationDlg.h /build/buildd/massxpert-3.2.2/gui/ui/sequencePurificationDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 30%] Generating ui_spectrumCalculationDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/gui/ui_spectrumCalculationDlg.h /build/buildd/massxpert-3.2.2/gui/ui/spectrumCalculationDlg.ui cd /build/buildd/massxpert-3.2.2/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.2 /build/buildd/massxpert-3.2.2/gui /build/buildd/massxpert-3.2.2/debian/build-arch /build/buildd/massxpert-3.2.2/debian/build-arch/gui /build/buildd/massxpert-3.2.2/debian/build-arch/gui/CMakeFiles/massxpert.dir/DependInfo.cmake --color= /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 5 [ 31%] Building CXX object lib/CMakeFiles/masslib.dir/calcOptions.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/calcOptions.cpp.o -c /build/buildd/massxpert-3.2.2/lib/calcOptions.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 31%] Building CXX object lib/CMakeFiles/masslib.dir/peakCentroid.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/peakCentroid.cpp.o -c /build/buildd/massxpert-3.2.2/lib/peakCentroid.cpp Scanning dependencies of target massxpert make[3]: Leaving directory 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-Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/cleaveOligomerTableViewModel.cpp.o -c /build/buildd/massxpert-3.2.2/gui/cleaveOligomerTableViewModel.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 45%] Building CXX object lib/CMakeFiles/masslib.dir/ionizeRule.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/ionizeRule.cpp.o -c /build/buildd/massxpert-3.2.2/lib/ionizeRule.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 45%] Building CXX object lib/CMakeFiles/masslib.dir/isotope.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/masslib.dir/isotope.cpp.o -c /build/buildd/massxpert-3.2.2/lib/isotope.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 45%] Building CXX object gui/CMakeFiles/massxpert.dir/cleaveOligomerTableViewSortProxyModel.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/cleaveOligomerTableViewSortProxyModel.cpp.o -c /build/buildd/massxpert-3.2.2/gui/cleaveOligomerTableViewSortProxyModel.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 15 [ 46%] Building CXX object lib/CMakeFiles/masslib.dir/isotopicPatternCalculator.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/lib && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch/lib -I/build/buildd/massxpert-3.2.2/debian/build-arch -Wall -Werror -g -O2 -g 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-I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_cleavageDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_cleavageDlg.cxx /usr/bin/make -f plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build.make plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 78%] Generating moc_massListSorterPlugin.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/usr/include/qt4 -I/usr/include/qt4/QtGui -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../../lib -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin/moc_massListSorterPlugin.cxx /build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/massListSorterPlugin.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 78%] Generating moc_massListSorterPluginDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/usr/include/qt4 -I/usr/include/qt4/QtGui -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../../lib -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin/moc_massListSorterPluginDlg.cxx /build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/massListSorterPluginDlg.hpp cd /build/buildd/massxpert-3.2.2/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.2 /build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin /build/buildd/massxpert-3.2.2/debian/build-arch /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/DependInfo.cmake --color= Scanning dependencies of target massListSorterPlugin make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/make -f plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build.make plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 1 [ 79%] Building CXX object plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/massListSorterPlugin.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/c++ -DmassListSorterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/massListSorterPlugin.dir/massListSorterPlugin.cpp.o -c /build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/massListSorterPlugin.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 79%] Building CXX object plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/massListSorterPluginDlg.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/c++ -DmassListSorterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/massListSorterPlugin.dir/massListSorterPluginDlg.cpp.o -c /build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/massListSorterPluginDlg.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 79%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_cleaveOligomerTableView.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_cleaveOligomerTableView.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_cleaveOligomerTableView.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 79%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_cleaveOligomerTableViewMimeData.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_cleaveOligomerTableViewMimeData.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_cleaveOligomerTableViewMimeData.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 79%] Building CXX object plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/moc_massListSorterPluginDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/c++ -DmassListSorterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/massListSorterPlugin.dir/moc_massListSorterPluginDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin/moc_massListSorterPluginDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 2 [ 80%] Building CXX object plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/moc_massListSorterPlugin.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/c++ -DmassListSorterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/massListSorterPlugin.dir/moc_massListSorterPlugin.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin/moc_massListSorterPlugin.cxx Linking CXX shared module libmassListSorterPlugin.so cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin && /usr/bin/cmake -E cmake_link_script CMakeFiles/massListSorterPlugin.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -shared -o libmassListSorterPlugin.so CMakeFiles/massListSorterPlugin.dir/massListSorterPlugin.cpp.o CMakeFiles/massListSorterPlugin.dir/massListSorterPluginDlg.cpp.o CMakeFiles/massListSorterPlugin.dir/moc_massListSorterPluginDlg.cxx.o CMakeFiles/massListSorterPlugin.dir/moc_massListSorterPlugin.cxx.o -lQtSvg -lQtGui -lQtXml -lQtCore -lQtGui -lQtXml -lQtCore make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 1 2 [ 80%] Built target massListSorterPlugin /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 81 [ 81%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_cleaveOligomerTableViewModel.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_cleaveOligomerTableViewModel.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_cleaveOligomerTableViewModel.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 81%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_cleaveSpecDefDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_cleaveSpecDefDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_cleaveSpecDefDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 81%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_compositionsDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_compositionsDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_compositionsDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 82 [ 82%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_compositionTreeView.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_compositionTreeView.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_compositionTreeView.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 82%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_compositionTreeViewModel.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_compositionTreeViewModel.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_compositionTreeViewModel.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 82%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_configurationSettingsDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_configurationSettingsDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_configurationSettingsDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 83 [ 83%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_crossLinkerDefDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_crossLinkerDefDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_crossLinkerDefDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 83%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_decimalPlacesOptionsDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_decimalPlacesOptionsDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_decimalPlacesOptionsDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 83%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_fragmentationDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_fragmentationDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_fragmentationDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 84 [ 84%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_fragmentOligomerTableView.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_fragmentOligomerTableView.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_fragmentOligomerTableView.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 84%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_fragmentOligomerTableViewMimeData.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_fragmentOligomerTableViewMimeData.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_fragmentOligomerTableViewMimeData.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 84%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_fragmentOligomerTableViewModel.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_fragmentOligomerTableViewModel.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_fragmentOligomerTableViewModel.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 85 [ 85%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_fragSpecDefDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_fragSpecDefDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_fragSpecDefDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 85%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_mainWindow.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_mainWindow.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mainWindow.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 85%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_massSearchDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_massSearchDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_massSearchDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 86 [ 86%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_massSearchOligomerTableView.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_massSearchOligomerTableView.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_massSearchOligomerTableView.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 86%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_massSearchOligomerTableViewMimeData.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_massSearchOligomerTableViewMimeData.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_massSearchOligomerTableViewMimeData.cxx /usr/bin/make -f plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build.make plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 86%] Generating moc_seqToolsPlugin.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/usr/include/qt4 -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtSvg -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../../lib -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin/moc_seqToolsPlugin.cxx /build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/seqToolsPlugin.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 98 [ 87%] Generating moc_seqToolsPluginDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/usr/include/qt4 -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtSvg -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../../lib -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin/moc_seqToolsPluginDlg.cxx /build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/seqToolsPluginDlg.hpp cd /build/buildd/massxpert-3.2.2/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.2 /build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin /build/buildd/massxpert-3.2.2/debian/build-arch /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/DependInfo.cmake --color= Scanning dependencies of target seqToolsPlugin make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/make -f plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build.make plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 87%] Building CXX object plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/seqToolsPlugin.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/c++ -DseqToolsPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/seqToolsPlugin.dir/seqToolsPlugin.cpp.o -c /build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/seqToolsPlugin.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 99 [ 88%] Building CXX object plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/seqToolsPluginDlg.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/c++ -DseqToolsPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/seqToolsPlugin.dir/seqToolsPluginDlg.cpp.o -c /build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/seqToolsPluginDlg.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 88%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_massSearchOligomerTableViewModel.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_massSearchOligomerTableViewModel.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_massSearchOligomerTableViewModel.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 87 [ 89%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_modifDefDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_modifDefDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_modifDefDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 89%] Building CXX object plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/moc_seqToolsPluginDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/c++ -DseqToolsPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/seqToolsPlugin.dir/moc_seqToolsPluginDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin/moc_seqToolsPluginDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 89%] /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 100 Building CXX object gui/CMakeFiles/massxpert.dir/moc_monomerCodeEvaluator.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_monomerCodeEvaluator.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_monomerCodeEvaluator.cxx [ 90%] Building CXX object plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/moc_seqToolsPlugin.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/c++ -DseqToolsPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/seqToolsPlugin.dir/moc_seqToolsPlugin.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin/moc_seqToolsPlugin.cxx Linking CXX shared module libseqToolsPlugin.so cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin && /usr/bin/cmake -E cmake_link_script CMakeFiles/seqToolsPlugin.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -shared -o libseqToolsPlugin.so CMakeFiles/seqToolsPlugin.dir/seqToolsPlugin.cpp.o CMakeFiles/seqToolsPlugin.dir/seqToolsPluginDlg.cpp.o 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-I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_monomerCrossLinkDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_monomerCrossLinkDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 88 [ 91%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_monomerDefDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_monomerDefDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_monomerDefDlg.cxx 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-I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_mzCalculationTreeViewModel.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_mzCalculationTreeViewModel.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 90 [ 93%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_mzLabInputOligomerTableView.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_mzLabInputOligomerTableView.cxx.o -c 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-I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_sequenceEditorFindDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_sequenceEditorFindDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 96%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_sequenceEditorGraphicsView.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_sequenceEditorGraphicsView.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_sequenceEditorGraphicsView.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 94 [ 97%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_sequenceEditorWnd.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_sequenceEditorWnd.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_sequenceEditorWnd.cxx /usr/bin/make -f plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build.make plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 97%] Generating ui_NumeralsLocaleConverterPluginDlg.h cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/uic-qt4 -o /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/ui_NumeralsLocaleConverterPluginDlg.h /build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/ui/NumeralsLocaleConverterPluginDlg.ui /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 97%] Generating moc_numeralsLocaleConverterPluginDlg.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/usr/include/qt4 -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtSvg -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../../lib -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/moc_numeralsLocaleConverterPluginDlg.cxx /build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/numeralsLocaleConverterPluginDlg.hpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 96 [ 98%] Generating moc_numeralsLocaleConverterPlugin.cxx cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/moc-qt4 -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/usr/include/qt4 -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtSvg -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../../lib -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -o /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/moc_numeralsLocaleConverterPlugin.cxx /build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/numeralsLocaleConverterPlugin.hpp cd /build/buildd/massxpert-3.2.2/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.2 /build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin /build/buildd/massxpert-3.2.2/debian/build-arch /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/DependInfo.cmake --color= Scanning dependencies of target numeralsLocaleConverterPlugin make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/make -f plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build.make plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 98%] Building CXX object plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/numeralsLocaleConverterPlugin.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/c++ -DnumeralsLocaleConverterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/numeralsLocaleConverterPlugin.dir/numeralsLocaleConverterPlugin.cpp.o -c /build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/numeralsLocaleConverterPlugin.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 97 [ 99%] Building CXX object plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/numeralsLocaleConverterPluginDlg.cpp.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/c++ -DnumeralsLocaleConverterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/numeralsLocaleConverterPlugin.dir/numeralsLocaleConverterPluginDlg.cpp.o -c /build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/numeralsLocaleConverterPluginDlg.cpp /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 99%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_sequenceImportDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_sequenceImportDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_sequenceImportDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 99%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_sequencePurificationDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_sequencePurificationDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_sequencePurificationDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 99%] Building CXX object plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/moc_numeralsLocaleConverterPluginDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/c++ -DnumeralsLocaleConverterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/numeralsLocaleConverterPlugin.dir/moc_numeralsLocaleConverterPluginDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/moc_numeralsLocaleConverterPluginDlg.cxx /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [ 99%] Building CXX object plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/moc_numeralsLocaleConverterPlugin.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/c++ -DnumeralsLocaleConverterPlugin_EXPORTS -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_PLUGIN -DQT_NO_DEBUG -DQT_SHARED -DQT_DEBUG -g -fPIC -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../.. -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../../gui -I/build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin/../../lib -Wall -Werror -g -O2 -o CMakeFiles/numeralsLocaleConverterPlugin.dir/moc_numeralsLocaleConverterPlugin.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/moc_numeralsLocaleConverterPlugin.cxx Linking CXX shared module libnumeralsLocaleConverterPlugin.so cd /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin && /usr/bin/cmake -E cmake_link_script CMakeFiles/numeralsLocaleConverterPlugin.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -shared -o libnumeralsLocaleConverterPlugin.so CMakeFiles/numeralsLocaleConverterPlugin.dir/numeralsLocaleConverterPlugin.cpp.o CMakeFiles/numeralsLocaleConverterPlugin.dir/numeralsLocaleConverterPluginDlg.cpp.o CMakeFiles/numeralsLocaleConverterPlugin.dir/moc_numeralsLocaleConverterPluginDlg.cxx.o CMakeFiles/numeralsLocaleConverterPlugin.dir/moc_numeralsLocaleConverterPlugin.cxx.o -lQtSvg -lQtGui -lQtXml -lQtCore -lQtGui -lQtXml -lQtCore /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 95 [100%] Building CXX object gui/CMakeFiles/massxpert.dir/moc_spectrumCalculationDlg.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/moc_spectrumCalculationDlg.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/moc_spectrumCalculationDlg.cxx make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 96 97 [100%] Built target numeralsLocaleConverterPlugin /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles [100%] Building CXX object gui/CMakeFiles/massxpert.dir/qrc_application.cxx.o cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/c++ -DQT_SVG_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -DQT_DEBUG -g -I/usr/include/qt4 -I/usr/include/qt4/QtSvg -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtXml -I/usr/include/qt4/QtCore -I/build/buildd/massxpert-3.2.2/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch/gui -I/build/buildd/massxpert-3.2.2/debian/build-arch -I/build/buildd/massxpert-3.2.2/gui/../lib -Wall -Werror -g -O2 -g -O0 -o CMakeFiles/massxpert.dir/qrc_application.cxx.o -c /build/buildd/massxpert-3.2.2/debian/build-arch/gui/qrc_application.cxx Linking CXX executable massxpert cd /build/buildd/massxpert-3.2.2/debian/build-arch/gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/massxpert.dir/link.txt --verbose=1 /usr/bin/c++ -g CMakeFiles/massxpert.dir/aboutDlg.cpp.o CMakeFiles/massxpert.dir/application.cpp.o CMakeFiles/massxpert.dir/atomDefDlg.cpp.o CMakeFiles/massxpert.dir/calculatorChemPadDlg.cpp.o CMakeFiles/massxpert.dir/calculatorChemPadGroupBox.cpp.o CMakeFiles/massxpert.dir/calculatorRecorderDlg.cpp.o CMakeFiles/massxpert.dir/calculatorWnd.cpp.o CMakeFiles/massxpert.dir/chemPadButton.cpp.o CMakeFiles/massxpert.dir/cleavageDlg.cpp.o CMakeFiles/massxpert.dir/cleaveOligomerTableView.cpp.o CMakeFiles/massxpert.dir/cleaveOligomerTableViewMimeData.cpp.o CMakeFiles/massxpert.dir/cleaveOligomerTableViewModel.cpp.o CMakeFiles/massxpert.dir/cleaveOligomerTableViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/cleaveSpecDefDlg.cpp.o CMakeFiles/massxpert.dir/compositionsDlg.cpp.o CMakeFiles/massxpert.dir/compositionTreeView.cpp.o CMakeFiles/massxpert.dir/compositionTreeViewItem.cpp.o CMakeFiles/massxpert.dir/compositionTreeViewModel.cpp.o CMakeFiles/massxpert.dir/compositionTreeViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/configurationSettingsDlg.cpp.o CMakeFiles/massxpert.dir/crossLinkerDefDlg.cpp.o CMakeFiles/massxpert.dir/decimalPlacesOptionsDlg.cpp.o CMakeFiles/massxpert.dir/fragmentationDlg.cpp.o CMakeFiles/massxpert.dir/fragmentOligomerTableView.cpp.o CMakeFiles/massxpert.dir/fragmentOligomerTableViewMimeData.cpp.o CMakeFiles/massxpert.dir/fragmentOligomerTableViewModel.cpp.o CMakeFiles/massxpert.dir/fragmentOligomerTableViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/fragSpecDefDlg.cpp.o CMakeFiles/massxpert.dir/main.cpp.o CMakeFiles/massxpert.dir/mainWindow.cpp.o CMakeFiles/massxpert.dir/massSearchDlg.cpp.o CMakeFiles/massxpert.dir/massSearchOligomerTableView.cpp.o CMakeFiles/massxpert.dir/massSearchOligomerTableViewMimeData.cpp.o CMakeFiles/massxpert.dir/massSearchOligomerTableViewModel.cpp.o CMakeFiles/massxpert.dir/massSearchOligomerTableViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/modifDefDlg.cpp.o CMakeFiles/massxpert.dir/monomerCodeEvaluator.cpp.o CMakeFiles/massxpert.dir/monomerCrossLinkDlg.cpp.o CMakeFiles/massxpert.dir/monomerDefDlg.cpp.o CMakeFiles/massxpert.dir/monomerModificationDlg.cpp.o CMakeFiles/massxpert.dir/mzCalculationDlg.cpp.o CMakeFiles/massxpert.dir/mzCalculationTreeView.cpp.o CMakeFiles/massxpert.dir/mzCalculationTreeViewItem.cpp.o CMakeFiles/massxpert.dir/mzCalculationTreeViewModel.cpp.o CMakeFiles/massxpert.dir/mzCalculationTreeViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/mzLabInputOligomerTableView.cpp.o CMakeFiles/massxpert.dir/mzLabInputOligomerTableViewDlg.cpp.o CMakeFiles/massxpert.dir/mzLabInputOligomerTableViewModel.cpp.o CMakeFiles/massxpert.dir/mzLabInputOligomerTableViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/mzLabOutputOligomerTableView.cpp.o CMakeFiles/massxpert.dir/mzLabOutputOligomerTableViewDlg.cpp.o CMakeFiles/massxpert.dir/mzLabOutputOligomerTableViewModel.cpp.o CMakeFiles/massxpert.dir/mzLabOutputOligomerTableViewSortProxyModel.cpp.o CMakeFiles/massxpert.dir/mzLabWnd.cpp.o CMakeFiles/massxpert.dir/pkaPhPiDlg.cpp.o CMakeFiles/massxpert.dir/polChemDefWnd.cpp.o CMakeFiles/massxpert.dir/polymerModificationDlg.cpp.o CMakeFiles/massxpert.dir/regionSelection.cpp.o CMakeFiles/massxpert.dir/sequenceEditorFindDlg.cpp.o CMakeFiles/massxpert.dir/sequenceEditorGraphicsView.cpp.o CMakeFiles/massxpert.dir/sequenceEditorGraphicsViewKeyboardHandling.cpp.o CMakeFiles/massxpert.dir/sequenceEditorGraphicsViewKeySequenceHandling.cpp.o CMakeFiles/massxpert.dir/sequenceEditorWnd.cpp.o CMakeFiles/massxpert.dir/sequenceImportDlg.cpp.o CMakeFiles/massxpert.dir/sequencePurificationDlg.cpp.o CMakeFiles/massxpert.dir/sequenceSelection.cpp.o CMakeFiles/massxpert.dir/spectrumCalculationDlg.cpp.o CMakeFiles/massxpert.dir/moc_aboutDlg.cxx.o CMakeFiles/massxpert.dir/moc_application.cxx.o CMakeFiles/massxpert.dir/moc_atomDefDlg.cxx.o CMakeFiles/massxpert.dir/moc_calculatorChemPadDlg.cxx.o CMakeFiles/massxpert.dir/moc_calculatorChemPadGroupBox.cxx.o CMakeFiles/massxpert.dir/moc_calculatorRecorderDlg.cxx.o CMakeFiles/massxpert.dir/moc_calculatorWnd.cxx.o CMakeFiles/massxpert.dir/moc_chemPadButton.cxx.o CMakeFiles/massxpert.dir/moc_cleavageDlg.cxx.o CMakeFiles/massxpert.dir/moc_cleaveOligomerTableView.cxx.o CMakeFiles/massxpert.dir/moc_cleaveOligomerTableViewMimeData.cxx.o CMakeFiles/massxpert.dir/moc_cleaveOligomerTableViewModel.cxx.o CMakeFiles/massxpert.dir/moc_cleaveSpecDefDlg.cxx.o CMakeFiles/massxpert.dir/moc_compositionsDlg.cxx.o CMakeFiles/massxpert.dir/moc_compositionTreeView.cxx.o CMakeFiles/massxpert.dir/moc_compositionTreeViewModel.cxx.o CMakeFiles/massxpert.dir/moc_configurationSettingsDlg.cxx.o CMakeFiles/massxpert.dir/moc_crossLinkerDefDlg.cxx.o CMakeFiles/massxpert.dir/moc_decimalPlacesOptionsDlg.cxx.o CMakeFiles/massxpert.dir/moc_fragmentationDlg.cxx.o CMakeFiles/massxpert.dir/moc_fragmentOligomerTableView.cxx.o CMakeFiles/massxpert.dir/moc_fragmentOligomerTableViewMimeData.cxx.o CMakeFiles/massxpert.dir/moc_fragmentOligomerTableViewModel.cxx.o CMakeFiles/massxpert.dir/moc_fragSpecDefDlg.cxx.o CMakeFiles/massxpert.dir/moc_mainWindow.cxx.o CMakeFiles/massxpert.dir/moc_massSearchDlg.cxx.o CMakeFiles/massxpert.dir/moc_massSearchOligomerTableView.cxx.o CMakeFiles/massxpert.dir/moc_massSearchOligomerTableViewMimeData.cxx.o CMakeFiles/massxpert.dir/moc_massSearchOligomerTableViewModel.cxx.o CMakeFiles/massxpert.dir/moc_modifDefDlg.cxx.o CMakeFiles/massxpert.dir/moc_monomerCodeEvaluator.cxx.o CMakeFiles/massxpert.dir/moc_monomerCrossLinkDlg.cxx.o CMakeFiles/massxpert.dir/moc_monomerDefDlg.cxx.o CMakeFiles/massxpert.dir/moc_monomerModificationDlg.cxx.o CMakeFiles/massxpert.dir/moc_mzCalculationDlg.cxx.o CMakeFiles/massxpert.dir/moc_mzCalculationTreeView.cxx.o CMakeFiles/massxpert.dir/moc_mzCalculationTreeViewModel.cxx.o CMakeFiles/massxpert.dir/moc_mzLabInputOligomerTableView.cxx.o CMakeFiles/massxpert.dir/moc_mzLabInputOligomerTableViewDlg.cxx.o CMakeFiles/massxpert.dir/moc_mzLabInputOligomerTableViewModel.cxx.o CMakeFiles/massxpert.dir/moc_mzLabOutputOligomerTableView.cxx.o CMakeFiles/massxpert.dir/moc_mzLabOutputOligomerTableViewDlg.cxx.o CMakeFiles/massxpert.dir/moc_mzLabOutputOligomerTableViewModel.cxx.o CMakeFiles/massxpert.dir/moc_mzLabWnd.cxx.o CMakeFiles/massxpert.dir/moc_pkaPhPiDlg.cxx.o CMakeFiles/massxpert.dir/moc_polChemDefWnd.cxx.o CMakeFiles/massxpert.dir/moc_polymerModificationDlg.cxx.o CMakeFiles/massxpert.dir/moc_sequenceEditorFindDlg.cxx.o CMakeFiles/massxpert.dir/moc_sequenceEditorGraphicsView.cxx.o CMakeFiles/massxpert.dir/moc_sequenceEditorWnd.cxx.o CMakeFiles/massxpert.dir/moc_sequenceImportDlg.cxx.o CMakeFiles/massxpert.dir/moc_sequencePurificationDlg.cxx.o CMakeFiles/massxpert.dir/moc_spectrumCalculationDlg.cxx.o CMakeFiles/massxpert.dir/qrc_application.cxx.o -o massxpert -rdynamic -Wl,-whole-archive ../lib/libmasslib.a -Wl,-no-whole-archive -lQtSvg -lQtGui -lQtXml -lQtCore -lQtXml -lQtSvg -lQtGui -lQtCore make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 [100%] Built target massxpert make[2]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_start /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 0 make[1]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' touch build-arch-stamp /usr/bin/fakeroot debian/rules binary-arch "---------------------------------------" NUMJOBS: 2 MAKEFLAGS: -j2 DEB_BUILD_OPTIONS: parallel=2 "---------------------------------------" dh_testdir dh_testroot dh_installdirs -a install -d debian/massxpert install -d debian/massxpert/usr/bin debian/massxpert/usr/lib install -d debian/massxpert-dbg mkdir -p /build/buildd/massxpert-3.2.2/debian/tmp-arch /usr/bin/make -C /build/buildd/massxpert-3.2.2/debian/build-arch install DESTDIR=/build/buildd/massxpert-3.2.2/debian/tmp-arch make[1]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -H/build/buildd/massxpert-3.2.2 -B/build/buildd/massxpert-3.2.2/debian/build-arch --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[2]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/make -f lib/CMakeFiles/masslib.dir/build.make lib/CMakeFiles/masslib.dir/depend /usr/bin/make -f gui/CMakeFiles/massxpert.dir/build.make gui/CMakeFiles/massxpert.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' cd /build/buildd/massxpert-3.2.2/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.2 /build/buildd/massxpert-3.2.2/lib /build/buildd/massxpert-3.2.2/debian/build-arch /build/buildd/massxpert-3.2.2/debian/build-arch/lib /build/buildd/massxpert-3.2.2/debian/build-arch/lib/CMakeFiles/masslib.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/make -f lib/CMakeFiles/masslib.dir/build.make lib/CMakeFiles/masslib.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' make[3]: Nothing to be done for `lib/CMakeFiles/masslib.dir/build'. make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 [ 23%] Built target masslib /usr/bin/make -f plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build.make plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' cd /build/buildd/massxpert-3.2.2/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.2 /build/buildd/massxpert-3.2.2/plugins-src/massListSorterPlugin /build/buildd/massxpert-3.2.2/debian/build-arch /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/make -f plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build.make plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' make[3]: Nothing to be done for `plugins-src/massListSorterPlugin/CMakeFiles/massListSorterPlugin.dir/build'. make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 1 2 [ 25%] Built target massListSorterPlugin /usr/bin/make -f plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build.make plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' cd /build/buildd/massxpert-3.2.2/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.2 /build/buildd/massxpert-3.2.2/plugins-src/seqToolsPlugin /build/buildd/massxpert-3.2.2/debian/build-arch /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/make -f plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build.make plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' make[3]: Nothing to be done for `plugins-src/seqToolsPlugin/CMakeFiles/seqToolsPlugin.dir/build'. make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 98 99 100 [ 28%] Built target seqToolsPlugin /usr/bin/make -f plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build.make plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/depend make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' cd /build/buildd/massxpert-3.2.2/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.2 /build/buildd/massxpert-3.2.2/plugins-src/numeralsLocaleConverterPlugin /build/buildd/massxpert-3.2.2/debian/build-arch /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin /build/buildd/massxpert-3.2.2/debian/build-arch/plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/DependInfo.cmake --color= make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/make -f plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build.make plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' cd /build/buildd/massxpert-3.2.2/debian/build-arch && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/buildd/massxpert-3.2.2 /build/buildd/massxpert-3.2.2/gui /build/buildd/massxpert-3.2.2/debian/build-arch /build/buildd/massxpert-3.2.2/debian/build-arch/gui /build/buildd/massxpert-3.2.2/debian/build-arch/gui/CMakeFiles/massxpert.dir/DependInfo.cmake --color= make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' make[3]: Nothing to be done for `plugins-src/numeralsLocaleConverterPlugin/CMakeFiles/numeralsLocaleConverterPlugin.dir/build'. make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 96 97 [ 30%] Built target numeralsLocaleConverterPlugin make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/make -f gui/CMakeFiles/massxpert.dir/build.make gui/CMakeFiles/massxpert.dir/build make[3]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' make[3]: Nothing to be done for `gui/CMakeFiles/massxpert.dir/build'. make[3]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_report /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 [100%] Built target massxpert make[2]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' /usr/bin/cmake -E cmake_progress_start /build/buildd/massxpert-3.2.2/debian/build-arch/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory `/build/buildd/massxpert-3.2.2/debian/build-arch' make[2]: Nothing to be done for `preinstall'. make[2]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "debug" -- Installing: /build/buildd/massxpert-3.2.2/debian/tmp-arch/usr/share/doc/massxpert/COPYING -- Installing: /build/buildd/massxpert-3.2.2/debian/tmp-arch/usr/share/applications/massxpert.desktop -- Installing: /build/buildd/massxpert-3.2.2/debian/tmp-arch/usr/share/man/man1/massxpert.1 -- Installing: /build/buildd/massxpert-3.2.2/debian/tmp-arch/usr/bin/massxpert -- Installing: /build/buildd/massxpert-3.2.2/debian/tmp-arch/usr/lib/massxpert/plugins/libmassListSorterPlugin.so -- Installing: /build/buildd/massxpert-3.2.2/debian/tmp-arch/usr/lib/massxpert/plugins/libseqToolsPlugin.so -- Installing: /build/buildd/massxpert-3.2.2/debian/tmp-arch/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so -- Installing: /build/buildd/massxpert-3.2.2/debian/tmp-arch/usr/share/massxpert/locales/massxpert_fr.qm make[1]: Leaving directory `/build/buildd/massxpert-3.2.2/debian/build-arch' install -o root -g root -d /build/buildd/massxpert-3.2.2/debian/tmp-arch/usr/share/pixmaps install -o root -g root -m 644 \ /build/buildd/massxpert-3.2.2/gui/images/massxpert-icon-32.xpm \ /build/buildd/massxpert-3.2.2/debian/tmp-arch/usr/share/pixmaps/massxpert-icon-32.xpm rm /build/buildd/massxpert-3.2.2/debian/tmp-arch/usr/share/doc/massxpert/COPYING touch install-arch-stamp dh_testdir -a dh_testroot -a dh_installchangelogs -a install -d debian/massxpert/usr/share/doc/massxpert install -o 0 -g 0 -p -m644 debian/changelog debian/massxpert/usr/share/doc/massxpert/changelog.Debian install -d debian/massxpert-dbg/usr/share/doc/massxpert-dbg install -o 0 -g 0 -p -m644 debian/changelog debian/massxpert-dbg/usr/share/doc/massxpert-dbg/changelog.Debian dh_installdocs -a install -g 0 -o 0 -m 644 -p debian/copyright debian/massxpert/usr/share/doc/massxpert/copyright install -g 0 -o 0 -m 644 -p debian/copyright debian/massxpert-dbg/usr/share/doc/massxpert-dbg/copyright dh_install -a cp -a ./debian/tmp-arch/usr/bin/massxpert debian/massxpert/usr/bin/ cp -a ./debian/tmp-arch/usr/lib/massxpert debian/massxpert/usr/lib/ install -d debian/massxpert/usr/share/pixmaps cp -a ./debian/tmp-arch/usr/share/pixmaps/massxpert-icon-32.xpm debian/massxpert/usr/share/pixmaps/ install -d debian/massxpert/usr/share/applications cp -a ./debian/tmp-arch/usr/share/applications/massxpert.desktop debian/massxpert/usr/share/applications/ install -d debian/massxpert/usr/share/massxpert/locales cp -a ./debian/tmp-arch/usr/share/massxpert/locales/massxpert_fr.qm debian/massxpert/usr/share/massxpert/locales/ dh_installmenu -a install -d debian/massxpert/usr/share/menu install -p -m644 debian/massxpert.menu debian/massxpert/usr/share/menu/massxpert echo "# Automatically added by dh_installmenu">> debian/massxpert.postinst.debhelper sed "" /usr/share/debhelper/autoscripts/postinst-menu >> debian/massxpert.postinst.debhelper echo '# End automatically added section' >> debian/massxpert.postinst.debhelper echo "# Automatically added by dh_installmenu">> debian/massxpert.postrm.debhelper sed "" /usr/share/debhelper/autoscripts/postrm-menu >> debian/massxpert.postrm.debhelper echo '# End automatically added section' >> debian/massxpert.postrm.debhelper dh_installman -a install -d debian/massxpert/usr/share/man/man1/ install -p -m644 debian/tmp-arch/usr/share/man/man1/massxpert.1 debian/massxpert/usr/share/man/man1/massxpert.1 man --recode UTF-8 ./massxpert\.1 > massxpert\.1\.new chmod 644 massxpert.1.new mv -f massxpert.1.new massxpert.1 dh_strip --dbg-package=massxpert-dbg -a dh_strip debug symbol extraction: all non-arch-all packages for this build platform amd64: massxpert massxpert-dbg dh_strip debug symbol extraction: not adding gnu debuglinks since --dbg-package is given dh_strip debug symbol extraction: packages to act on: massxpert massxpert-dbg dh_strip debug symbol extraction: ignored packages: dpkg-deb: building package `massxpert-dbgsym' in `../massxpert-dbgsym_3.2.2-1_amd64.ddeb'. install -d debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins objcopy --only-keep-debug debian/massxpert/usr/lib/massxpert/plugins/libmassListSorterPlugin.so debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libmassListSorterPlugin.so chmod 644 debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libmassListSorterPlugin.so strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/massxpert/usr/lib/massxpert/plugins/libmassListSorterPlugin.so objcopy --add-gnu-debuglink debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libmassListSorterPlugin.so debian/massxpert/usr/lib/massxpert/plugins/libmassListSorterPlugin.so objcopy --only-keep-debug debian/massxpert/usr/lib/massxpert/plugins/libseqToolsPlugin.so debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libseqToolsPlugin.so chmod 644 debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libseqToolsPlugin.so strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/massxpert/usr/lib/massxpert/plugins/libseqToolsPlugin.so objcopy --add-gnu-debuglink debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libseqToolsPlugin.so debian/massxpert/usr/lib/massxpert/plugins/libseqToolsPlugin.so objcopy --only-keep-debug debian/massxpert/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so chmod 644 debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/massxpert/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so objcopy --add-gnu-debuglink debian/massxpert-dbg/usr/lib/debug//usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so debian/massxpert/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so install -d debian/massxpert-dbg/usr/lib/debug//usr/bin objcopy --only-keep-debug debian/massxpert/usr/bin/massxpert debian/massxpert-dbg/usr/lib/debug//usr/bin/massxpert chmod 644 debian/massxpert-dbg/usr/lib/debug//usr/bin/massxpert strip --remove-section=.comment --remove-section=.note debian/massxpert/usr/bin/massxpert objcopy --add-gnu-debuglink debian/massxpert-dbg/usr/lib/debug//usr/bin/massxpert debian/massxpert/usr/bin/massxpert dh_compress -a cd debian/massxpert chmod a-x usr/share/man/man1/massxpert.1 usr/share/doc/massxpert/changelog.Debian gzip -9nf usr/share/man/man1/massxpert.1 usr/share/doc/massxpert/changelog.Debian cd '/build/buildd/massxpert-3.2.2' cd debian/massxpert-dbg chmod a-x usr/share/doc/massxpert-dbg/changelog.Debian gzip -9nf usr/share/doc/massxpert-dbg/changelog.Debian cd '/build/buildd/massxpert-3.2.2' dh_fixperms -a find debian/massxpert -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/massxpert ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/massxpert/usr/share/doc -type f ! -regex 'debian/massxpert/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert/usr/share/doc -type d -print0 2>/dev/null | xargs -0r chmod 755 find debian/massxpert/usr/share/man debian/massxpert/usr/man/ debian/massxpert/usr/X11*/man/ -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert -perm -5 -type f \( -name '*.so.*' -or -name '*.so' -or -name '*.la' -or -name '*.a' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert/usr/include -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert/usr/share/applications -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert -perm -5 -type f \( -name '*.cmxs' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert/usr/lib/perl5 debian/massxpert/usr/share/perl5 -type f -perm -5 -name '*.pm' -print0 2>/dev/null | xargs -0r chmod a-X find debian/massxpert/usr/bin -type f -print0 2>/dev/null | xargs -0r chmod a+x find debian/massxpert/usr/lib -type f -name '*.ali' -print0 2>/dev/null | xargs -0r chmod uga-w find debian/massxpert-dbg -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/massxpert-dbg ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/massxpert-dbg/usr/share/doc -type f ! -regex 'debian/massxpert-dbg/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert-dbg/usr/share/doc -type d -print0 2>/dev/null | xargs -0r chmod 755 find debian/massxpert-dbg/usr/share/man debian/massxpert-dbg/usr/man/ debian/massxpert-dbg/usr/X11*/man/ -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert-dbg -perm -5 -type f \( -name '*.so.*' -or -name '*.so' -or -name '*.la' -or -name '*.a' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert-dbg/usr/include -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert-dbg/usr/share/applications -type f -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert-dbg -perm -5 -type f \( -name '*.cmxs' \) -print0 2>/dev/null | xargs -0r chmod 644 find debian/massxpert-dbg/usr/lib/perl5 debian/massxpert-dbg/usr/share/perl5 -type f -perm -5 -name '*.pm' -print0 2>/dev/null | xargs -0r chmod a-X find debian/massxpert-dbg/usr/lib -type f -name '*.ali' -print0 2>/dev/null | xargs -0r chmod uga-w dh_installdeb -a install -o 0 -g 0 -d debian/massxpert/DEBIAN printf '#!/bin/sh set -e ' > debian/massxpert/DEBIAN/postinst cat debian/massxpert.postinst.debhelper >> debian/massxpert/DEBIAN/postinst chown 0:0 debian/massxpert/DEBIAN/postinst chmod 755 debian/massxpert/DEBIAN/postinst printf '#!/bin/sh set -e ' > debian/massxpert/DEBIAN/postrm cat debian/massxpert.postrm.debhelper >> debian/massxpert/DEBIAN/postrm chown 0:0 debian/massxpert/DEBIAN/postrm chmod 755 debian/massxpert/DEBIAN/postrm install -o 0 -g 0 -d debian/massxpert-dbg/DEBIAN dh_shlibdeps -a dpkg-shlibdeps -Tdebian/massxpert.substvars debian/massxpert/usr/bin/massxpert debian/massxpert/usr/lib/massxpert/plugins/libmassListSorterPlugin.so debian/massxpert/usr/lib/massxpert/plugins/libseqToolsPlugin.so debian/massxpert/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so dh_gencontrol -a echo misc:Depends= >> debian/massxpert.substvars dpkg-gencontrol -pmassxpert -ldebian/changelog -Tdebian/massxpert.substvars -Pdebian/massxpert chmod 644 debian/massxpert/DEBIAN/control chown 0:0 debian/massxpert/DEBIAN/control echo misc:Depends= >> debian/massxpert-dbg.substvars dpkg-gencontrol -pmassxpert-dbg -ldebian/changelog -Tdebian/massxpert-dbg.substvars -Pdebian/massxpert-dbg chmod 644 debian/massxpert-dbg/DEBIAN/control chown 0:0 debian/massxpert-dbg/DEBIAN/control dh_md5sums -a (cd debian/massxpert >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null chmod 644 debian/massxpert/DEBIAN/md5sums chown 0:0 debian/massxpert/DEBIAN/md5sums (cd debian/massxpert-dbg >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null chmod 644 debian/massxpert-dbg/DEBIAN/md5sums chown 0:0 debian/massxpert-dbg/DEBIAN/md5sums dh_builddeb -a dpkg-deb --build debian/massxpert .. INFO: pkgstriptranslations version 116 pkgstriptranslations: processing massxpert (in debian/massxpert); do_strip: , oemstrip: debian/massxpert/usr/share/applications/massxpert.desktop: does not have gettext domain, not stripping pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/massxpert/DEBIAN/control, package massxpert, directory debian/massxpert pkgstripfiles: Truncating usr/share/doc/massxpert/changelog.Debian.gz to topmost ten records pkgstripfiles: PNG optimization for package massxpert took 0 s dpkg-deb: warning: 'debian/massxpert/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `massxpert' in `../massxpert_3.2.2-1_amd64.deb'. dpkg-deb --build debian/massxpert-dbg .. INFO: pkgstriptranslations version 116 pkgstriptranslations: processing massxpert-dbg (in debian/massxpert-dbg); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/massxpert-dbg/DEBIAN/control, package massxpert-dbg, directory debian/massxpert-dbg Searching for duplicated docs in dependency massxpert... symlinking changelog.Debian.gz in massxpert-dbg to file in massxpert pkgstripfiles: PNG optimization for package massxpert-dbg took 0 s dpkg-deb: warning: 'debian/massxpert-dbg/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `massxpert-dbg' in `../massxpert-dbg_3.2.2-1_amd64.deb'. dpkg-genchanges -B -mUbuntu/amd64 Build Daemon >../massxpert_3.2.2-1_amd64.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build massxpert-3.2.2 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20120525-0740 Publishing debug debs. chroot-autobuild/build/buildd/massxpert_3.2.2-1_amd64.deb: new debian package, version 2.0. size 1117994 bytes: control archive= 1487 bytes. 1351 bytes, 30 lines control 816 bytes, 11 lines md5sums 185 bytes, 7 lines * postinst #!/bin/sh 160 bytes, 5 lines * postrm #!/bin/sh Package: massxpert Version: 3.2.2-1 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: The Debichem Group Installed-Size: 3258 Depends: libc6 (>= 2.14), libgcc1 (>= 1:4.1.1), libqt4-svg (>= 4:4.5.3), libqt4-xml (>= 4:4.5.3), libqtcore4 (>= 4:4.8.0), libqtgui4 (>= 4:4.8.0), libstdc++6 (>= 4.1.1), massxpert-data (>= 3.2.2), massxpert-data (<< 3.2.2A~) Suggests: massxpert-doc Conflicts: massxpert-bin Replaces: massxpert-bin Section: science Priority: optional Homepage: http://www.massxpert.org Description: linear polymer mass spectrometry software massXpert is a program to simulate and analyse mass spectrometric data obtained on linear (bio-)polymers. It is the successor of GNU polyxmass. . Four modules allow: - making brand new polymer chemistry definitions; - using the definitions to perform easy calculations in a desktop calculator-like manner; - performing sophisticated polymer sequence editing and simulations; - perform m/z list comparisons; . Chemical simulations encompass cleavage (either chemical or enzymatic), gas-phase fragmentations, chemical modification of any monomer in the polymer sequence, cross-linking of monomers in the sequence, arbitrary mass searches, calculation of the isotopic pattern... chroot-autobuild/build/buildd/massxpert-dbg_3.2.2-1_amd64.deb: new debian package, version 2.0. size 13153734 bytes: control archive= 1033 bytes. 1185 bytes, 30 lines control 444 bytes, 5 lines md5sums Package: massxpert-dbg Source: massxpert Version: 3.2.2-1 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: The Debichem Group Installed-Size: 31371 Depends: massxpert (= 3.2.2-1) Section: debug Priority: extra Homepage: http://www.massxpert.org Description: linear polymer mass spectrometry software - debugging symbols massXpert is a program to simulate and analyse mass spectrometric data obtained on linear (bio-)polymers. It is the successor of GNU polyxmass. . Four modules allow: - making brand new polymer chemistry definitions; - using the definitions to perform easy calculations in a desktop calculator-like manner; - performing sophisticated polymer sequence editing and simulations; - perform m/z list comparisons; . Chemical simulations encompass cleavage (either chemical or enzymatic), gas-phase fragmentations, chemical modification of any monomer in the polymer sequence, cross-linking of monomers in the sequence, arbitrary mass searches, calculation of the isotopic pattern... . This package provides the debugging symbols for massxpert. chroot-autobuild/build/buildd/massxpert_3.2.2-1_amd64.deb: drwxr-xr-x root/root 0 2012-05-25 07:40 ./ drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/ drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/bin/ -rwxr-xr-x root/root 2922472 2012-05-25 07:40 ./usr/bin/massxpert drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/lib/ drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/lib/massxpert/ drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/lib/massxpert/plugins/ -rw-r--r-- root/root 31408 2012-05-25 07:40 ./usr/lib/massxpert/plugins/libmassListSorterPlugin.so -rw-r--r-- root/root 52256 2012-05-25 07:40 ./usr/lib/massxpert/plugins/libseqToolsPlugin.so -rw-r--r-- root/root 35592 2012-05-25 07:40 ./usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/share/ drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/share/doc/massxpert/ -rw-r--r-- root/root 1060 2012-05-14 15:33 ./usr/share/doc/massxpert/copyright -rw-r--r-- root/root 1684 2012-05-25 07:40 ./usr/share/doc/massxpert/changelog.Debian.gz drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/share/pixmaps/ -rw-r--r-- root/root 12417 2012-05-25 07:39 ./usr/share/pixmaps/massxpert-icon-32.xpm drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/share/applications/ -rw-r--r-- root/root 386 2012-05-14 15:33 ./usr/share/applications/massxpert.desktop drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/share/massxpert/ drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/share/massxpert/locales/ -rw-r--r-- root/root 198171 2012-05-14 15:33 ./usr/share/massxpert/locales/massxpert_fr.qm drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/share/menu/ -rw-r--r-- root/root 257 2012-05-14 15:33 ./usr/share/menu/massxpert drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/share/man/ drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/share/man/man1/ -rw-r--r-- root/root 1115 2012-05-25 07:39 ./usr/share/man/man1/massxpert.1.gz chroot-autobuild/build/buildd/massxpert-dbg_3.2.2-1_amd64.deb: drwxr-xr-x root/root 0 2012-05-25 07:40 ./ drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/ drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/share/ drwxr-xr-x root/root 0 2012-05-25 07:39 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/share/doc/massxpert-dbg/ -rw-r--r-- root/root 1060 2012-05-14 15:33 ./usr/share/doc/massxpert-dbg/copyright drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/lib/ drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/lib/debug/ drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/lib/debug/usr/ drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/lib/debug/usr/lib/ drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/lib/debug/usr/lib/massxpert/ drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/lib/debug/usr/lib/massxpert/plugins/ -rw-r--r-- root/root 725281 2012-05-25 07:40 ./usr/lib/debug/usr/lib/massxpert/plugins/libmassListSorterPlugin.so -rw-r--r-- root/root 849121 2012-05-25 07:40 ./usr/lib/debug/usr/lib/massxpert/plugins/libseqToolsPlugin.so -rw-r--r-- root/root 881904 2012-05-25 07:40 ./usr/lib/debug/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so drwxr-xr-x root/root 0 2012-05-25 07:40 ./usr/lib/debug/usr/bin/ -rw-r--r-- root/root 29602985 2012-05-25 07:40 ./usr/lib/debug/usr/bin/massxpert lrwxrwxrwx root/root 0 2012-05-25 07:40 ./usr/share/doc/massxpert-dbg/changelog.Debian.gz -> ../massxpert/changelog.Debian.gz massxpert_3.2.2-1_amd64.changes: Format: 1.8 Date: Mon, 14 May 2012 17:28:42 +0200 Source: massxpert Binary: massxpert massxpert-dbg massxpert-data massxpert-doc Architecture: amd64 Version: 3.2.2-1 Distribution: quantal Urgency: low Maintainer: Ubuntu/amd64 Build Daemon Changed-By: Filippo Rusconi Description: massxpert - linear polymer mass spectrometry software massxpert-data - linear polymer mass spectrometry software - arch-indep data massxpert-dbg - linear polymer mass spectrometry software - debugging symbols massxpert-doc - Linear polymer mass spectrometry software - manual Changes: massxpert (3.2.2-1) unstable; urgency=low . * Upstream release: . - Fix warning messages from gcc, complaining about set variable values, but unused variables. Replaced corresponding Q_ASSERT() calls to qFatal() ones. Checksums-Sha1: a19c15c34dce1574d66f742c1706934bd4cb6de3 1117994 massxpert_3.2.2-1_amd64.deb bb047931f5de18c48f723d2d68b0f81820436be1 13153734 massxpert-dbg_3.2.2-1_amd64.deb Checksums-Sha256: 081daf804bf2df39f23e606cb31ccd18d31aecc9670ac8a5713d8fb57357ef37 1117994 massxpert_3.2.2-1_amd64.deb e4160acdc80bbc002aa1d696369dc99ce49ebbca6398ed7b9a4c0a4e7539f975 13153734 massxpert-dbg_3.2.2-1_amd64.deb Files: 7967ef64a8804edc5a22e2f07ad2bd4b 1117994 science optional massxpert_3.2.2-1_amd64.deb a0be8ca4c0b1b8cd631b6613fdfcc029 13153734 debug extra massxpert-dbg_3.2.2-1_amd64.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20120525-0740 Build needed 00:06:12, 307500k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '137e9d3897d3b955d376c31057ce25ceeb2f155e'] Scanning for processes to kill in build /home/buildd/build-137e9d3897d3b955d376c31057ce25ceeb2f155e/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '137e9d3897d3b955d376c31057ce25ceeb2f155e'] Unmounting chroot for build 137e9d3897d3b955d376c31057ce25ceeb2f155e... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '137e9d3897d3b955d376c31057ce25ceeb2f155e'] Removing build 137e9d3897d3b955d376c31057ce25ceeb2f155e