RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'ac1dcb552cd487d9a343985d001bd2747aa7d9bc', '/home/buildd/filecache-default/e77e987d74e485e6064945c56cdac27b71ae2ba4'] Synching the system clock with the buildd NTP service... 12 Dec 13:31:11 ntpdate[27854]: adjust time server 10.122.37.1 offset 0.000584 sec Unpacking chroot for build ac1dcb552cd487d9a343985d001bd2747aa7d9bc RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'ac1dcb552cd487d9a343985d001bd2747aa7d9bc'] Mounting chroot for build ac1dcb552cd487d9a343985d001bd2747aa7d9bc RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'ac1dcb552cd487d9a343985d001bd2747aa7d9bc', 'deb http://ftpmaster.internal/ubuntu natty main restricted universe multiverse'] Overriding sources.list in build-ac1dcb552cd487d9a343985d001bd2747aa7d9bc RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'ac1dcb552cd487d9a343985d001bd2747aa7d9bc', 'i386'] Updating debian chroot for build ac1dcb552cd487d9a343985d001bd2747aa7d9bc Get:1 http://ftpmaster.internal natty Release.gpg [198 B] Ign http://ftpmaster.internal/ubuntu/ natty/main Translation-en Ign http://ftpmaster.internal/ubuntu/ natty/multiverse Translation-en Ign http://ftpmaster.internal/ubuntu/ natty/restricted Translation-en Ign http://ftpmaster.internal/ubuntu/ natty/universe Translation-en Get:2 http://ftpmaster.internal natty Release [39.8 kB] Get:3 http://ftpmaster.internal natty/main i386 Packages [1534 kB] Get:4 http://ftpmaster.internal natty/restricted i386 Packages [5997 B] Get:5 http://ftpmaster.internal natty/universe i386 Packages [6003 kB] Get:6 http://ftpmaster.internal natty/multiverse i386 Packages [187 kB] Fetched 7770 kB in 6s (1212 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: cpp-4.5 g++-4.5 gcc-4.5 gcc-4.5-base libgcc1 libgomp1 libstdc++6 libstdc++6-4.5-dev 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 18.4 MB of archives. After this operation, 0 B of additional disk space will be used. WARNING: The following packages cannot be authenticated! libgomp1 gcc-4.5-base libstdc++6 cpp-4.5 libstdc++6-4.5-dev g++-4.5 gcc-4.5 libgcc1 Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ natty/main libgomp1 i386 4.5.1-12ubuntu1 [24.0 kB] Get:2 http://ftpmaster.internal/ubuntu/ natty/main gcc-4.5-base i386 4.5.1-12ubuntu1 [12.4 kB] Get:3 http://ftpmaster.internal/ubuntu/ natty/main libstdc++6 i386 4.5.1-12ubuntu1 [333 kB] Get:4 http://ftpmaster.internal/ubuntu/ natty/main cpp-4.5 i386 4.5.1-12ubuntu1 [4141 kB] Get:5 http://ftpmaster.internal/ubuntu/ natty/main libstdc++6-4.5-dev i386 4.5.1-12ubuntu1 [1527 kB] Get:6 http://ftpmaster.internal/ubuntu/ natty/main g++-4.5 i386 4.5.1-12ubuntu1 [5495 kB] Get:7 http://ftpmaster.internal/ubuntu/ natty/main gcc-4.5 i386 4.5.1-12ubuntu1 [6858 kB] Get:8 http://ftpmaster.internal/ubuntu/ natty/main libgcc1 i386 1:4.5.1-12ubuntu1 [51.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.4 MB in 0s (26.7 MB/s) (Reading database ... 13670 files and directories currently installed.) Preparing to replace libgomp1 4.5.1-10ubuntu3 (using .../libgomp1_4.5.1-12ubuntu1_i386.deb) ... Unpacking replacement libgomp1 ... Preparing to replace gcc-4.5-base 4.5.1-10ubuntu3 (using .../gcc-4.5-base_4.5.1-12ubuntu1_i386.deb) ... Unpacking replacement gcc-4.5-base ... Setting up gcc-4.5-base (4.5.1-12ubuntu1) ... (Reading database ... 13670 files and directories currently installed.) Preparing to replace libstdc++6 4.5.1-10ubuntu3 (using .../libstdc++6_4.5.1-12ubuntu1_i386.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.5.1-12ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 13670 files and directories currently installed.) Preparing to replace cpp-4.5 4.5.1-10ubuntu3 (using .../cpp-4.5_4.5.1-12ubuntu1_i386.deb) ... Unpacking replacement cpp-4.5 ... Preparing to replace libstdc++6-4.5-dev 4.5.1-10ubuntu3 (using .../libstdc++6-4.5-dev_4.5.1-12ubuntu1_i386.deb) ... Unpacking replacement libstdc++6-4.5-dev ... Preparing to replace g++-4.5 4.5.1-10ubuntu3 (using .../g++-4.5_4.5.1-12ubuntu1_i386.deb) ... Unpacking replacement g++-4.5 ... Preparing to replace gcc-4.5 4.5.1-10ubuntu3 (using .../gcc-4.5_4.5.1-12ubuntu1_i386.deb) ... Unpacking replacement gcc-4.5 ... Preparing to replace libgcc1 1:4.5.1-10ubuntu3 (using .../libgcc1_1%3a4.5.1-12ubuntu1_i386.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.5.1-12ubuntu1) ... Setting up libgomp1 (4.5.1-12ubuntu1) ... Setting up cpp-4.5 (4.5.1-12ubuntu1) ... Setting up gcc-4.5 (4.5.1-12ubuntu1) ... Setting up g++-4.5 (4.5.1-12ubuntu1) ... Setting up libstdc++6-4.5-dev (4.5.1-12ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'ac1dcb552cd487d9a343985d001bd2747aa7d9bc', 'i386', 'natty', '--nolog', '--batch', '--archive=ubuntu', '--dist=natty', '-A', '--purpose=PRIMARY', '--architecture=i386', '--comp=multiverse', 'mgltools-bhtree_1.5.4.cvs.20100912-1build1.dsc'] Initiating build ac1dcb552cd487d9a343985d001bd2747aa7d9bc with 2 processor cores. Automatic build of mgltools-bhtree_1.5.4.cvs.20100912-1build1 on palmer by sbuild/i386 1.170.5 Build started at 20101212-1331 ****************************************************************************** mgltools-bhtree_1.5.4.cvs.20100912-1build1.dsc exists in cwd sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 7), python-central (>= 0.5.6), cdbs (>= 0.4), python-all-dev, python-numpy, swig (>= 1.3.20) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) sh: gcc: not found dpkg-architecture: warning: Couldn't determine gcc system type, falling back to default (native compilation) Checking for already installed source dependencies... debhelper: missing python-central: missing cdbs: missing python-all-dev: missing python-numpy: missing swig: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper python-central cdbs python-all-dev python-numpy swig Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: autoconf automake autotools-dev bsdmainutils fdupes file gettext gettext-base groff-base html2text intltool intltool-debian libblas3gf libcroco3 libexpat1 libexpat1-dev libgfortran3 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl liblapack3gf libmagic1 libpipeline1 libpython2.6 libpython2.7 libsqlite3-0 libssl-dev libunistring0 liburi-perl libwww-perl libxml-parser-perl libxml2 m4 man-db mime-support po-debconf python python-all python-dev python-scour python-support python2.6 python2.6-dev python2.6-minimal python2.7 python2.7-dev zlib1g-dev Suggested packages: autoconf2.13 autoconf-archive gnu-standards autoconf-doc libtool wamerican wordlist whois vacation devscripts doc-base dh-make gettext-doc groff libdata-dump-perl libcrypt-ssleay-perl libio-socket-ssl-perl less www-browser libmail-box-perl python-doc python-tk python-profiler python-numpy-doc python-numpy-dbg python-nose gfortran python2.6-doc python2.6-profiler binfmt-support python2.7-doc python2.7-profiler swig-examples swig-doc Recommended packages: curl wget lynx-cur libmailtools-perl libhtml-format-perl xml-core libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autotools-dev bsdmainutils cdbs debhelper fdupes file gettext gettext-base groff-base html2text intltool intltool-debian libblas3gf libcroco3 libexpat1 libexpat1-dev libgfortran3 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl liblapack3gf libmagic1 libpipeline1 libpython2.6 libpython2.7 libsqlite3-0 libssl-dev libunistring0 liburi-perl libwww-perl libxml-parser-perl libxml2 m4 man-db mime-support po-debconf python python-all python-all-dev python-central python-dev python-numpy python-scour python-support python2.6 python2.6-dev python2.6-minimal python2.7 python2.7-dev swig zlib1g-dev 0 upgraded, 53 newly installed, 0 to remove and 0 not upgraded. Need to get 36.1 MB of archives. After this operation, 114 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libmagic1 file libexpat1 libsqlite3-0 mime-support python2.7 python python-central bsdmainutils gettext-base groff-base liburi-perl libhtml-tagset-perl libhtml-parser-perl libhtml-tree-perl libpipeline1 libwww-perl libxml-parser-perl libxml2 man-db python-support python2.6-minimal libpython2.6 zlib1g-dev libssl-dev python2.6-dev python2.6 m4 autoconf autotools-dev automake html2text libcroco3 libunistring0 gettext intltool-debian po-debconf debhelper fdupes intltool python-scour cdbs libgfortran3 libblas3gf libexpat1-dev liblapack3gf libpython2.7 python-all python2.7-dev python-dev python-all-dev python-numpy swig Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ natty/main libmagic1 i386 5.04-5ubuntu2 [204 kB] Get:2 http://ftpmaster.internal/ubuntu/ natty/main file i386 5.04-5ubuntu2 [22.1 kB] Get:3 http://ftpmaster.internal/ubuntu/ natty/main libexpat1 i386 2.0.1-7ubuntu1 [139 kB] Get:4 http://ftpmaster.internal/ubuntu/ natty/main libsqlite3-0 i386 3.7.4-1 [308 kB] Get:5 http://ftpmaster.internal/ubuntu/ natty/main mime-support all 3.51-1ubuntu1 [30.7 kB] Get:6 http://ftpmaster.internal/ubuntu/ natty/main python2.7 i386 2.7.1-1ubuntu1 [2495 kB] Get:7 http://ftpmaster.internal/ubuntu/ natty/main python all 2.7.1-0ubuntu1 [164 kB] Get:8 http://ftpmaster.internal/ubuntu/ natty/main python-central all 0.6.15ubuntu3 [38.8 kB] Get:9 http://ftpmaster.internal/ubuntu/ natty/main bsdmainutils i386 8.0.17 [188 kB] Get:10 http://ftpmaster.internal/ubuntu/ natty/main gettext-base i386 0.18.1.1-3ubuntu1 [56.6 kB] Get:11 http://ftpmaster.internal/ubuntu/ natty/main groff-base i386 1.20.1-10build1 [1023 kB] Get:12 http://ftpmaster.internal/ubuntu/ natty/main liburi-perl all 1.56-1 [90.6 kB] Get:13 http://ftpmaster.internal/ubuntu/ natty/main libhtml-tagset-perl all 3.20-2 [13.5 kB] Get:14 http://ftpmaster.internal/ubuntu/ natty/main libhtml-parser-perl i386 3.68-1 [100 kB] Get:15 http://ftpmaster.internal/ubuntu/ natty/main libhtml-tree-perl all 4.1-1 [206 kB] Get:16 http://ftpmaster.internal/ubuntu/ natty/main libpipeline1 i386 1.0.0-3 [23.6 kB] Get:17 http://ftpmaster.internal/ubuntu/ natty/main libwww-perl all 5.837-1 [363 kB] Get:18 http://ftpmaster.internal/ubuntu/ natty/main libxml-parser-perl i386 2.36-1.1build3 [323 kB] Get:19 http://ftpmaster.internal/ubuntu/ natty/main libxml2 i386 2.7.8.dfsg-1 [605 kB] Get:20 http://ftpmaster.internal/ubuntu/ natty/main man-db i386 2.5.9-2 [677 kB] Get:21 http://ftpmaster.internal/ubuntu/ natty/main python-support all 1.0.10ubuntu3 [25.9 kB] Get:22 http://ftpmaster.internal/ubuntu/ natty/main python2.6-minimal i386 2.6.6-6ubuntu4 [1387 kB] Get:23 http://ftpmaster.internal/ubuntu/ natty/main libpython2.6 i386 2.6.6-6ubuntu4 [995 kB] Get:24 http://ftpmaster.internal/ubuntu/ natty/main zlib1g-dev i386 1:1.2.3.4.dfsg-3ubuntu1 [188 kB] Get:25 http://ftpmaster.internal/ubuntu/ natty/main libssl-dev i386 0.9.8o-3ubuntu1 [2013 kB] Get:26 http://ftpmaster.internal/ubuntu/ natty/main python2.6-dev i386 2.6.6-6ubuntu4 [4437 kB] Get:27 http://ftpmaster.internal/ubuntu/ natty/main python2.6 i386 2.6.6-6ubuntu4 [2357 kB] Get:28 http://ftpmaster.internal/ubuntu/ natty/main m4 i386 1.4.14-3 [276 kB] Get:29 http://ftpmaster.internal/ubuntu/ natty/main autoconf all 2.67-2ubuntu1 [569 kB] Get:30 http://ftpmaster.internal/ubuntu/ natty/main autotools-dev all 20100122.1 [70.7 kB] Get:31 http://ftpmaster.internal/ubuntu/ natty/main automake all 1:1.11.1-1ubuntu1 [544 kB] Get:32 http://ftpmaster.internal/ubuntu/ natty/main html2text i386 1.3.2a-15 [101 kB] Get:33 http://ftpmaster.internal/ubuntu/ natty/main libcroco3 i386 0.6.2-1 [92.5 kB] Get:34 http://ftpmaster.internal/ubuntu/ natty/main libunistring0 i386 0.9.3-3 [423 kB] Get:35 http://ftpmaster.internal/ubuntu/ natty/main gettext i386 0.18.1.1-3ubuntu1 [1180 kB] Get:36 http://ftpmaster.internal/ubuntu/ natty/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:37 http://ftpmaster.internal/ubuntu/ natty/main po-debconf all 1.0.16+nmu1 [212 kB] Get:38 http://ftpmaster.internal/ubuntu/ natty/main debhelper all 8.0.0ubuntu1 [460 kB] Get:39 http://ftpmaster.internal/ubuntu/ natty/main fdupes i386 1.50-PR2-3 [20.0 kB] Get:40 http://ftpmaster.internal/ubuntu/ natty/main intltool all 0.41.1-1 [103 kB] Get:41 http://ftpmaster.internal/ubuntu/ natty/main python-scour all 0.25+bzr194-0ubuntu3 [37.1 kB] Get:42 http://ftpmaster.internal/ubuntu/ natty/main cdbs all 0.4.89ubuntu6 [961 kB] Get:43 http://ftpmaster.internal/ubuntu/ natty/main libgfortran3 i386 4.5.1-12ubuntu1 [237 kB] Get:44 http://ftpmaster.internal/ubuntu/ natty/main libblas3gf i386 1.2-8 [204 kB] Get:45 http://ftpmaster.internal/ubuntu/ natty/main libexpat1-dev i386 2.0.1-7ubuntu1 [213 kB] Get:46 http://ftpmaster.internal/ubuntu/ natty/main liblapack3gf i386 3.2.2-1.2 [2989 kB] Get:47 http://ftpmaster.internal/ubuntu/ natty/main libpython2.7 i386 2.7.1-1ubuntu1 [1076 kB] Get:48 http://ftpmaster.internal/ubuntu/ natty/main python-all all 2.7.1-0ubuntu1 [920 B] Get:49 http://ftpmaster.internal/ubuntu/ natty/main python2.7-dev i386 2.7.1-1ubuntu1 [4733 kB] Get:50 http://ftpmaster.internal/ubuntu/ natty/main python-dev all 2.7.1-0ubuntu1 [996 B] Get:51 http://ftpmaster.internal/ubuntu/ natty/main python-all-dev all 2.7.1-0ubuntu1 [936 B] Get:52 http://ftpmaster.internal/ubuntu/ natty/main python-numpy i386 1:1.4.1-5ubuntu3 [1892 kB] Get:53 http://ftpmaster.internal/ubuntu/ natty/main swig i386 1.3.40-3ubuntu1 [1207 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 36.1 MB in 1s (25.4 MB/s) Selecting previously deselected package libmagic1. (Reading database ... 13670 files and directories currently installed.) Unpacking libmagic1 (from .../libmagic1_5.04-5ubuntu2_i386.deb) ... Selecting previously deselected package file. Unpacking file (from .../file_5.04-5ubuntu2_i386.deb) ... Selecting previously deselected package libexpat1. Unpacking libexpat1 (from .../libexpat1_2.0.1-7ubuntu1_i386.deb) ... Selecting previously deselected package libsqlite3-0. Unpacking libsqlite3-0 (from .../libsqlite3-0_3.7.4-1_i386.deb) ... Selecting previously deselected package mime-support. Unpacking mime-support (from .../mime-support_3.51-1ubuntu1_all.deb) ... Selecting previously deselected package python2.7. Unpacking python2.7 (from .../python2.7_2.7.1-1ubuntu1_i386.deb) ... Selecting previously deselected package python. Unpacking python (from .../python_2.7.1-0ubuntu1_all.deb) ... Selecting previously deselected package python-central. Unpacking python-central (from .../python-central_0.6.15ubuntu3_all.deb) ... Selecting previously deselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_8.0.17_i386.deb) ... Selecting previously deselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.18.1.1-3ubuntu1_i386.deb) ... Selecting previously deselected package groff-base. Unpacking groff-base (from .../groff-base_1.20.1-10build1_i386.deb) ... Selecting previously deselected package liburi-perl. Unpacking liburi-perl (from .../liburi-perl_1.56-1_all.deb) ... Selecting previously deselected package libhtml-tagset-perl. Unpacking libhtml-tagset-perl (from .../libhtml-tagset-perl_3.20-2_all.deb) ... Selecting previously deselected package libhtml-parser-perl. Unpacking libhtml-parser-perl (from .../libhtml-parser-perl_3.68-1_i386.deb) ... Selecting previously deselected package libhtml-tree-perl. Unpacking libhtml-tree-perl (from .../libhtml-tree-perl_4.1-1_all.deb) ... Selecting previously deselected package libpipeline1. Unpacking libpipeline1 (from .../libpipeline1_1.0.0-3_i386.deb) ... Selecting previously deselected package libwww-perl. Unpacking libwww-perl (from .../libwww-perl_5.837-1_all.deb) ... Selecting previously deselected package libxml-parser-perl. Unpacking libxml-parser-perl (from .../libxml-parser-perl_2.36-1.1build3_i386.deb) ... Selecting previously deselected package libxml2. Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-1_i386.deb) ... Selecting previously deselected package man-db. Unpacking man-db (from .../man-db_2.5.9-2_i386.deb) ... Selecting previously deselected package python-support. Unpacking python-support (from .../python-support_1.0.10ubuntu3_all.deb) ... Selecting previously deselected package python2.6-minimal. Unpacking python2.6-minimal (from .../python2.6-minimal_2.6.6-6ubuntu4_i386.deb) ... Selecting previously deselected package libpython2.6. Unpacking libpython2.6 (from .../libpython2.6_2.6.6-6ubuntu4_i386.deb) ... Selecting previously deselected package zlib1g-dev. Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3ubuntu1_i386.deb) ... Selecting previously deselected package libssl-dev. Unpacking libssl-dev (from .../libssl-dev_0.9.8o-3ubuntu1_i386.deb) ... Selecting previously deselected package python2.6-dev. Unpacking python2.6-dev (from .../python2.6-dev_2.6.6-6ubuntu4_i386.deb) ... Selecting previously deselected package python2.6. Unpacking python2.6 (from .../python2.6_2.6.6-6ubuntu4_i386.deb) ... Selecting previously deselected package m4. Unpacking m4 (from .../archives/m4_1.4.14-3_i386.deb) ... Selecting previously deselected package autoconf. Unpacking autoconf (from .../autoconf_2.67-2ubuntu1_all.deb) ... Selecting previously deselected package autotools-dev. Unpacking autotools-dev (from .../autotools-dev_20100122.1_all.deb) ... Selecting previously deselected package automake. Unpacking automake (from .../automake_1%3a1.11.1-1ubuntu1_all.deb) ... Selecting previously deselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-15_i386.deb) ... Selecting previously deselected package libcroco3. Unpacking libcroco3 (from .../libcroco3_0.6.2-1_i386.deb) ... Selecting previously deselected package libunistring0. Unpacking libunistring0 (from .../libunistring0_0.9.3-3_i386.deb) ... Selecting previously deselected package gettext. Unpacking gettext (from .../gettext_0.18.1.1-3ubuntu1_i386.deb) ... Selecting previously deselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously deselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ... Selecting previously deselected package debhelper. Unpacking debhelper (from .../debhelper_8.0.0ubuntu1_all.deb) ... Selecting previously deselected package fdupes. Unpacking fdupes (from .../fdupes_1.50-PR2-3_i386.deb) ... Selecting previously deselected package intltool. Unpacking intltool (from .../intltool_0.41.1-1_all.deb) ... Selecting previously deselected package python-scour. Unpacking python-scour (from .../python-scour_0.25+bzr194-0ubuntu3_all.deb) ... Selecting previously deselected package cdbs. Unpacking cdbs (from .../cdbs_0.4.89ubuntu6_all.deb) ... Selecting previously deselected package libgfortran3. Unpacking libgfortran3 (from .../libgfortran3_4.5.1-12ubuntu1_i386.deb) ... Selecting previously deselected package libblas3gf. Unpacking libblas3gf (from .../libblas3gf_1.2-8_i386.deb) ... Selecting previously deselected package libexpat1-dev. Unpacking libexpat1-dev (from .../libexpat1-dev_2.0.1-7ubuntu1_i386.deb) ... Selecting previously deselected package liblapack3gf. Unpacking liblapack3gf (from .../liblapack3gf_3.2.2-1.2_i386.deb) ... Selecting previously deselected package libpython2.7. Unpacking libpython2.7 (from .../libpython2.7_2.7.1-1ubuntu1_i386.deb) ... Selecting previously deselected package python-all. Unpacking python-all (from .../python-all_2.7.1-0ubuntu1_all.deb) ... Selecting previously deselected package python2.7-dev. Unpacking python2.7-dev (from .../python2.7-dev_2.7.1-1ubuntu1_i386.deb) ... Selecting previously deselected package python-dev. Unpacking python-dev (from .../python-dev_2.7.1-0ubuntu1_all.deb) ... Selecting previously deselected package python-all-dev. Unpacking python-all-dev (from .../python-all-dev_2.7.1-0ubuntu1_all.deb) ... Selecting previously deselected package python-numpy. Unpacking python-numpy (from .../python-numpy_1%3a1.4.1-5ubuntu3_i386.deb) ... Selecting previously deselected package swig. Unpacking swig (from .../swig_1.3.40-3ubuntu1_i386.deb) ... Setting up libmagic1 (5.04-5ubuntu2) ... Setting up file (5.04-5ubuntu2) ... Setting up libexpat1 (2.0.1-7ubuntu1) ... Setting up libsqlite3-0 (3.7.4-1) ... Setting up mime-support (3.51-1ubuntu1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode. Setting up python2.7 (2.7.1-1ubuntu1) ... Setting up python (2.7.1-0ubuntu1) ... Setting up python-central (0.6.15ubuntu3) ... Setting up bsdmainutils (8.0.17) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up gettext-base (0.18.1.1-3ubuntu1) ... Setting up groff-base (1.20.1-10build1) ... Setting up liburi-perl (1.56-1) ... Setting up libhtml-tagset-perl (3.20-2) ... Setting up libhtml-parser-perl (3.68-1) ... Setting up libhtml-tree-perl (4.1-1) ... Setting up libpipeline1 (1.0.0-3) ... Setting up libwww-perl (5.837-1) ... Setting up libxml-parser-perl (2.36-1.1build3) ... Setting up libxml2 (2.7.8.dfsg-1) ... Setting up man-db (2.5.9-2) ... Building database of manual pages ... Setting up python-support (1.0.10ubuntu3) ... Setting up python2.6-minimal (2.6.6-6ubuntu4) ... Linking and byte-compiling packages for runtime python2.6... Setting up zlib1g-dev (1:1.2.3.4.dfsg-3ubuntu1) ... Setting up libssl-dev (0.9.8o-3ubuntu1) ... Setting up m4 (1.4.14-3) ... Setting up autoconf (2.67-2ubuntu1) ... Setting up autotools-dev (20100122.1) ... Setting up automake (1:1.11.1-1ubuntu1) ... update-alternatives: using /usr/bin/automake-1.11 to provide /usr/bin/automake (automake) in auto mode. Setting up html2text (1.3.2a-15) ... Setting up libcroco3 (0.6.2-1) ... Setting up libunistring0 (0.9.3-3) ... Setting up gettext (0.18.1.1-3ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu1) ... Setting up debhelper (8.0.0ubuntu1) ... Setting up fdupes (1.50-PR2-3) ... Setting up intltool (0.41.1-1) ... Setting up python-scour (0.25+bzr194-0ubuntu3) ... Setting up cdbs (0.4.89ubuntu6) ... Setting up libgfortran3 (4.5.1-12ubuntu1) ... Setting up libblas3gf (1.2-8) ... update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode. Setting up libexpat1-dev (2.0.1-7ubuntu1) ... Setting up liblapack3gf (3.2.2-1.2) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode. Setting up libpython2.7 (2.7.1-1ubuntu1) ... Setting up python2.7-dev (2.7.1-1ubuntu1) ... Setting up python-dev (2.7.1-0ubuntu1) ... Setting up python-numpy (1:1.4.1-5ubuntu3) ... Setting up swig (1.3.40-3ubuntu1) ... Setting up python2.6-dev (2.6.6-6ubuntu4) ... Setting up python2.6 (2.6.6-6ubuntu4) ... Setting up libpython2.6 (2.6.6-6ubuntu4) ... Setting up python-all (2.7.1-0ubuntu1) ... Setting up python-all-dev (2.7.1-0ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Processing triggers for python-support ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.12.1-0ubuntu9 make_3.81-8 dpkg-dev_1.15.8.6ubuntu1 gcc-4.5_4.5.1-12ubuntu1 g++-4.5_4.5.1-12ubuntu1 binutils_2.21-1ubuntu4 libstdc++6-4.5-dev_4.5.1-12ubuntu1 libstdc++6_4.5.1-12ubuntu1 ------------------------------------------------------------------------------ gpgv: Signature made Sun Dec 12 13:27:20 2010 UTC using RSA key ID B5CD1ACC gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./mgltools-bhtree_1.5.4.cvs.20100912-1build1.dsc dpkg-source: info: extracting mgltools-bhtree in mgltools-bhtree-1.5.4.cvs.20100912 dpkg-source: info: unpacking mgltools-bhtree_1.5.4.cvs.20100912.orig.tar.gz dpkg-source: info: applying mgltools-bhtree_1.5.4.cvs.20100912-1build1.diff.gz dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): -Wl,-Bsymbolic-functions dpkg-buildpackage: source package mgltools-bhtree dpkg-buildpackage: source version 1.5.4.cvs.20100912-1build1 dpkg-source --before-build mgltools-bhtree-1.5.4.cvs.20100912 dpkg-buildpackage: host architecture i386 /usr/bin/fakeroot debian/rules clean test -x debian/rules dh_testroot dh_clean for buildver in 2.7 2.6; do \ cd /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912 && cd . && python$buildver setup.py clean -a; \ done running clean 'build/lib.linux-i686-2.7' does not exist -- can't clean it 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it running clean 'build/lib.linux-i686-2.6' does not exist -- can't clean it 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-2.6' does not exist -- can't clean it rm -rf debian/python-module-stampdir find . -name '*.pyc' -exec rm '{}' ';' find . -prune -name '*.egg-info' -exec rm -rf '{}' ';' find . -name CVS -a -type d| xargs -r rm -r rm -rf build build-stamp debian/Pmv debian/rules build test -x debian/rules mkdir -p "." mkdir -p debian/python-module-stampdir set -e; for buildver in 2.7 2.6; do \ cd /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912 && cd . && python$buildver setup.py build --build-base="/build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build"; \ done running build running build_ext building '_bhtreelib' extension swigging bhtree/bhtreelib.i to bhtree/bhtreelib_wrap.c swig -python -o bhtree/bhtreelib_wrap.c bhtree/bhtreelib.i bhtree/bhtreelib.i:12: Warning(124): Specifying the language name in %typemap is deprecated - use #ifdef SWIG instead. creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build/temp.linux-i686-2.7 creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build/temp.linux-i686-2.7/bhtree creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build/temp.linux-i686-2.7/src gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -g -Wall -O2 -fPIC -I./src -I/usr/lib/pymodules/python2.7/numpy/core/include -I/usr/include/python2.7 -c bhtree/bhtreelib_wrap.c -o /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/temp.linux-i686-2.7/bhtree/bhtreelib_wrap.o bhtree/bhtreelib_wrap.c: In function 'contiguous_typed_array': bhtree/bhtreelib_wrap.c:2723:20: warning: unused variable 'itemsize' bhtree/bhtreelib_wrap.c:2723:10: warning: unused variable 'numitems' bhtree/bhtreelib_wrap.c: In function 'l_output_helper2': bhtree/bhtreelib_wrap.c:2779:17: warning: unused variable 'o3' bhtree/bhtreelib_wrap.c: In function 'contiguous_typed_array1': bhtree/bhtreelib_wrap.c:2821:12: warning: comparison of distinct pointer types lacks a cast bhtree/bhtreelib_wrap.c:2806:20: warning: unused variable 'itemsize' bhtree/bhtreelib_wrap.c:2806:10: warning: unused variable 'numitems' bhtree/bhtreelib_wrap.c: In function '_wrap_findFaceSubset': bhtree/bhtreelib_wrap.c:3349:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_BHpoint_x_set': bhtree/bhtreelib_wrap.c:3401:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_xmin_set': bhtree/bhtreelib_wrap.c:4070:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_xmax_set': bhtree/bhtreelib_wrap.c:4137:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_nodeLookUp_get': bhtree/bhtreelib_wrap.c:4339:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePoints': bhtree/bhtreelib_wrap.c:4538:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsDist': bhtree/bhtreelib_wrap.c:4621:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsDist2': bhtree/bhtreelib_wrap.c:4729:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsPairsInTree': bhtree/bhtreelib_wrap.c:4832:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsPairs': bhtree/bhtreelib_wrap.c:4941:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closestPointsArray': bhtree/bhtreelib_wrap.c:5055:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_findClosePairsInTree': bhtree/bhtreelib_wrap.c:5497:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_findClosePairs': bhtree/bhtreelib_wrap.c:5606:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_findClosestAtoms': bhtree/bhtreelib_wrap.c:5718:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHPoint_Pos_set': bhtree/bhtreelib_wrap.c:5776:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHNode_xmin_set': bhtree/bhtreelib_wrap.c:6599:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHNode_xmax_set': bhtree/bhtreelib_wrap.c:6666:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_xmin_set': bhtree/bhtreelib_wrap.c:7034:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_xmax_set': bhtree/bhtreelib_wrap.c:7101:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_ClosePoints': bhtree/bhtreelib_wrap.c:7408:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_ClosePointsDist2': bhtree/bhtreelib_wrap.c:7491:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_xmin_set': bhtree/bhtreelib_wrap.c:7851:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_xmax_set': bhtree/bhtreelib_wrap.c:7918:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_ClosePoints': bhtree/bhtreelib_wrap.c:8460:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_ClosePointsDist2': bhtree/bhtreelib_wrap.c:8543:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_MoveRBHPoint': bhtree/bhtreelib_wrap.c:8746:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_FindTBHNodeUp': bhtree/bhtreelib_wrap.c:8855:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_MoveTBHPoint': bhtree/bhtreelib_wrap.c:8980:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_MoveRBHPoint': bhtree/bhtreelib_wrap.c:9635:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: At top level: bhtree/bhtreelib_wrap.c:2777:18: warning: 'l_output_helper2' defined but not used bhtree/bhtreelib_wrap.c: In function '_wrap_new_RBHTree': bhtree/bhtreelib_wrap.c:8291:18: warning: 'array1' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:8294:18: warning: 'array3' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_new_TBHTree': bhtree/bhtreelib_wrap.c:7263:18: warning: 'array1' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:7266:18: warning: 'array3' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_new_BHtree': bhtree/bhtreelib_wrap.c:4430:18: warning: 'array1' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:4433:18: warning: 'array3' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePoints': bhtree/bhtreelib_wrap.c:4581:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsDist': bhtree/bhtreelib_wrap.c:4685:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:4689:6: warning: 'array6' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsDist2': bhtree/bhtreelib_wrap.c:4793:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:4797:6: warning: 'array6' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsPairs': bhtree/bhtreelib_wrap.c:4874:18: warning: 'array2' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:4877:18: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_findClosePairs': bhtree/bhtreelib_wrap.c:5539:18: warning: 'array2' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:5542:18: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closestPointsArray': bhtree/bhtreelib_wrap.c:4998:18: warning: 'array2' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_findClosestAtoms': bhtree/bhtreelib_wrap.c:5663:18: warning: 'array2' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_ClosePoints': bhtree/bhtreelib_wrap.c:7451:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_ClosePointsDist2': bhtree/bhtreelib_wrap.c:7555:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:7559:6: warning: 'array6' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_ClosePoints': bhtree/bhtreelib_wrap.c:8503:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_ClosePointsDist2': bhtree/bhtreelib_wrap.c:8607:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:8611:6: warning: 'array6' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_findFaceSubset': bhtree/bhtreelib_wrap.c:3289:18: warning: 'array1' may be used uninitialized in this function gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -g -Wall -O2 -fPIC -I./src -I/usr/lib/pymodules/python2.7/numpy/core/include -I/usr/include/python2.7 -c src/bhtree.c -o /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/temp.linux-i686-2.7/src/bhtree.o src/bhtree.c: In function 'findBHcloseAtoms': src/bhtree.c:410:9: warning: unused variable 'n' creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build/lib.linux-i686-2.7 creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build/lib.linux-i686-2.7/bhtree gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 -g -Wall -O2 /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/temp.linux-i686-2.7/bhtree/bhtreelib_wrap.o /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/temp.linux-i686-2.7/src/bhtree.o -o /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.7/bhtree/_bhtreelib.so running build_py copying bhtree/__init__.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.7/bhtree copying bhtree/bhtreelib.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.7/bhtree creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build/lib.linux-i686-2.7/bhtree/Tests copying bhtree/Tests/test_dependencies.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.7/bhtree/Tests copying bhtree/Tests/__init__.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.7/bhtree/Tests copying bhtree/Tests/crn_crd.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.7/bhtree/Tests copying bhtree/Tests/test.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.7/bhtree/Tests copying bhtree/Tests/cv_crd_and_rad.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.7/bhtree/Tests copying bhtree/Tests/crn_crd_and_rad.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.7/bhtree/Tests running build running build_ext building '_bhtreelib' extension swigging bhtree/bhtreelib.i to bhtree/bhtreelib_wrap.c swig -python -o bhtree/bhtreelib_wrap.c bhtree/bhtreelib.i bhtree/bhtreelib.i:12: Warning(124): Specifying the language name in %typemap is deprecated - use #ifdef SWIG instead. creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build/temp.linux-i686-2.6 creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build/temp.linux-i686-2.6/bhtree creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build/temp.linux-i686-2.6/src gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -g -Wall -O2 -fPIC -I./src -I/usr/lib/pymodules/python2.6/numpy/core/include -I/usr/include/python2.6 -c bhtree/bhtreelib_wrap.c -o /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/temp.linux-i686-2.6/bhtree/bhtreelib_wrap.o bhtree/bhtreelib_wrap.c: In function 'contiguous_typed_array': bhtree/bhtreelib_wrap.c:2723:20: warning: unused variable 'itemsize' bhtree/bhtreelib_wrap.c:2723:10: warning: unused variable 'numitems' bhtree/bhtreelib_wrap.c: In function 'l_output_helper2': bhtree/bhtreelib_wrap.c:2779:17: warning: unused variable 'o3' bhtree/bhtreelib_wrap.c: In function 'contiguous_typed_array1': bhtree/bhtreelib_wrap.c:2821:12: warning: comparison of distinct pointer types lacks a cast bhtree/bhtreelib_wrap.c:2806:20: warning: unused variable 'itemsize' bhtree/bhtreelib_wrap.c:2806:10: warning: unused variable 'numitems' bhtree/bhtreelib_wrap.c: In function '_wrap_findFaceSubset': bhtree/bhtreelib_wrap.c:3349:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_BHpoint_x_set': bhtree/bhtreelib_wrap.c:3401:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_xmin_set': bhtree/bhtreelib_wrap.c:4070:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_xmax_set': bhtree/bhtreelib_wrap.c:4137:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_nodeLookUp_get': bhtree/bhtreelib_wrap.c:4339:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePoints': bhtree/bhtreelib_wrap.c:4538:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsDist': bhtree/bhtreelib_wrap.c:4621:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsDist2': bhtree/bhtreelib_wrap.c:4729:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsPairsInTree': bhtree/bhtreelib_wrap.c:4832:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsPairs': bhtree/bhtreelib_wrap.c:4941:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closestPointsArray': bhtree/bhtreelib_wrap.c:5055:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_findClosePairsInTree': bhtree/bhtreelib_wrap.c:5497:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_findClosePairs': bhtree/bhtreelib_wrap.c:5606:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_findClosestAtoms': bhtree/bhtreelib_wrap.c:5718:12: warning: unused variable 'ip' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHPoint_Pos_set': bhtree/bhtreelib_wrap.c:5776:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHNode_xmin_set': bhtree/bhtreelib_wrap.c:6599:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHNode_xmax_set': bhtree/bhtreelib_wrap.c:6666:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_xmin_set': bhtree/bhtreelib_wrap.c:7034:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_xmax_set': bhtree/bhtreelib_wrap.c:7101:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_ClosePoints': bhtree/bhtreelib_wrap.c:7408:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_ClosePointsDist2': bhtree/bhtreelib_wrap.c:7491:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_xmin_set': bhtree/bhtreelib_wrap.c:7851:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_xmax_set': bhtree/bhtreelib_wrap.c:7918:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_ClosePoints': bhtree/bhtreelib_wrap.c:8460:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_ClosePointsDist2': bhtree/bhtreelib_wrap.c:8543:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_MoveRBHPoint': bhtree/bhtreelib_wrap.c:8746:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_FindTBHNodeUp': bhtree/bhtreelib_wrap.c:8855:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_MoveTBHPoint': bhtree/bhtreelib_wrap.c:8980:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: In function '_wrap_MoveRBHPoint': bhtree/bhtreelib_wrap.c:9635:9: warning: unused variable 'i' bhtree/bhtreelib_wrap.c: At top level: bhtree/bhtreelib_wrap.c:2777:18: warning: 'l_output_helper2' defined but not used bhtree/bhtreelib_wrap.c: In function '_wrap_new_RBHTree': bhtree/bhtreelib_wrap.c:8291:18: warning: 'array1' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:8294:18: warning: 'array3' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_new_TBHTree': bhtree/bhtreelib_wrap.c:7263:18: warning: 'array1' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:7266:18: warning: 'array3' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_new_BHtree': bhtree/bhtreelib_wrap.c:4430:18: warning: 'array1' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:4433:18: warning: 'array3' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePoints': bhtree/bhtreelib_wrap.c:4581:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsDist': bhtree/bhtreelib_wrap.c:4685:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:4689:6: warning: 'array6' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsDist2': bhtree/bhtreelib_wrap.c:4793:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:4797:6: warning: 'array6' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsPairs': bhtree/bhtreelib_wrap.c:4874:18: warning: 'array2' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:4877:18: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_findClosePairs': bhtree/bhtreelib_wrap.c:5539:18: warning: 'array2' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:5542:18: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closestPointsArray': bhtree/bhtreelib_wrap.c:4998:18: warning: 'array2' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_findClosestAtoms': bhtree/bhtreelib_wrap.c:5663:18: warning: 'array2' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_ClosePoints': bhtree/bhtreelib_wrap.c:7451:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_ClosePointsDist2': bhtree/bhtreelib_wrap.c:7555:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:7559:6: warning: 'array6' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_ClosePoints': bhtree/bhtreelib_wrap.c:8503:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_ClosePointsDist2': bhtree/bhtreelib_wrap.c:8607:6: warning: 'array4' may be used uninitialized in this function bhtree/bhtreelib_wrap.c:8611:6: warning: 'array6' may be used uninitialized in this function bhtree/bhtreelib_wrap.c: In function '_wrap_findFaceSubset': bhtree/bhtreelib_wrap.c:3289:18: warning: 'array1' may be used uninitialized in this function gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -g -Wall -O2 -fPIC -I./src -I/usr/lib/pymodules/python2.6/numpy/core/include -I/usr/include/python2.6 -c src/bhtree.c -o /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/temp.linux-i686-2.6/src/bhtree.o src/bhtree.c: In function 'findBHcloseAtoms': src/bhtree.c:410:9: warning: unused variable 'n' creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build/lib.linux-i686-2.6 creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build/lib.linux-i686-2.6/bhtree gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -O2 -g -Wall -O2 /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/temp.linux-i686-2.6/bhtree/bhtreelib_wrap.o /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/temp.linux-i686-2.6/src/bhtree.o -o /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.6/bhtree/_bhtreelib.so running build_py copying bhtree/__init__.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.6/bhtree copying bhtree/bhtreelib.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.6/bhtree creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/build/lib.linux-i686-2.6/bhtree/Tests copying bhtree/Tests/test_dependencies.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.6/bhtree/Tests copying bhtree/Tests/__init__.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.6/bhtree/Tests copying bhtree/Tests/crn_crd.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.6/bhtree/Tests copying bhtree/Tests/test.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.6/bhtree/Tests copying bhtree/Tests/cv_crd_and_rad.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.6/bhtree/Tests copying bhtree/Tests/crn_crd_and_rad.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.6/bhtree/Tests touch debian/python-module-stampdir/mgltools-bhtree /usr/bin/fakeroot debian/rules binary test -x debian/rules dh_testroot dh_prep dh_installdirs -A mkdir -p "." mkdir -p debian/python-module-stampdir set -e; for buildver in 2.7 2.6; do \ cd /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912 && cd . && python$buildver setup.py build --build-base="/build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build"; \ done running build running build_ext running build_py copying bhtree/bhtreelib.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/./build/lib.linux-i686-2.7/bhtree running build running build_ext running build_py touch debian/python-module-stampdir/mgltools-bhtree Adding cdbs dependencies to debian/mgltools-bhtree.substvars dh_installdirs -pmgltools-bhtree set -e; for buildver in 2.7 2.6; do \ cd /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912 && cd . && python$buildver setup.py install \ --root="/build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/" --install-purelib=/usr/lib/python$buildver/site-packages/ \ --install-platlib=/usr/lib/python$buildver/site-packages/ --prefix=/usr --no-compile -O0 --install-layout=deb; \ done running install running build running build_ext running build_py running install_lib creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7 creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages/bhtree copying build/lib.linux-i686-2.7/bhtree/_bhtreelib.so -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages/bhtree copying build/lib.linux-i686-2.7/bhtree/__init__.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages/bhtree copying build/lib.linux-i686-2.7/bhtree/bhtreelib.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages/bhtree creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages/bhtree/Tests copying build/lib.linux-i686-2.7/bhtree/Tests/test_dependencies.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages/bhtree/Tests copying build/lib.linux-i686-2.7/bhtree/Tests/__init__.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages/bhtree/Tests copying build/lib.linux-i686-2.7/bhtree/Tests/crn_crd.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages/bhtree/Tests copying build/lib.linux-i686-2.7/bhtree/Tests/test.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages/bhtree/Tests copying build/lib.linux-i686-2.7/bhtree/Tests/cv_crd_and_rad.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages/bhtree/Tests copying build/lib.linux-i686-2.7/bhtree/Tests/crn_crd_and_rad.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages/bhtree/Tests running install_egg_info Writing /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.7/site-packages/bhtree-1.5.4.egg-info running install running build running build_ext running build_py running install_lib creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6 creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages/bhtree copying build/lib.linux-i686-2.6/bhtree/_bhtreelib.so -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages/bhtree copying build/lib.linux-i686-2.6/bhtree/__init__.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages/bhtree copying build/lib.linux-i686-2.6/bhtree/bhtreelib.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages/bhtree creating /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages/bhtree/Tests copying build/lib.linux-i686-2.6/bhtree/Tests/test_dependencies.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages/bhtree/Tests copying build/lib.linux-i686-2.6/bhtree/Tests/__init__.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages/bhtree/Tests copying build/lib.linux-i686-2.6/bhtree/Tests/crn_crd.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages/bhtree/Tests copying build/lib.linux-i686-2.6/bhtree/Tests/test.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages/bhtree/Tests copying build/lib.linux-i686-2.6/bhtree/Tests/cv_crd_and_rad.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages/bhtree/Tests copying build/lib.linux-i686-2.6/bhtree/Tests/crn_crd_and_rad.py -> /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages/bhtree/Tests running install_egg_info Writing /build/buildd/mgltools-bhtree-1.5.4.cvs.20100912/debian/mgltools-bhtree/usr/lib/python2.6/site-packages/bhtree-1.5.4.egg-info dh_installdocs -pmgltools-bhtree ./README dh_installexamples -pmgltools-bhtree dh_installman -pmgltools-bhtree dh_installinfo -pmgltools-bhtree dh_installmenu -pmgltools-bhtree dh_installcron -pmgltools-bhtree dh_installinit -pmgltools-bhtree Duplicate specification "O=s" for option "O" dh_installdebconf -pmgltools-bhtree dh_installemacsen -pmgltools-bhtree dh_installcatalogs -pmgltools-bhtree dh_installpam -pmgltools-bhtree dh_installlogrotate -pmgltools-bhtree dh_installlogcheck -pmgltools-bhtree dh_installchangelogs -pmgltools-bhtree dh_installudev -pmgltools-bhtree dh_lintian -pmgltools-bhtree dh_install -pmgltools-bhtree dh_link -pmgltools-bhtree dh_installmime -pmgltools-bhtree dh_pycentral -pmgltools-bhtree \1 better written as $1 at /usr/bin/dh_pycentral line 203. renaming debian/mgltools-bhtree/usr/lib/python2.7/site-packages to debian/mgltools-bhtree/usr/lib/python2.7/dist-packages renaming debian/mgltools-bhtree/usr/lib/python2.6/site-packages to debian/mgltools-bhtree/usr/lib/python2.6/dist-packages diff debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree debian/mgltools-bhtree/usr/lib/python2.6/dist-packages/bhtree Identical files : ['__init__.py', 'bhtreelib.py'] Differing files : ['_bhtreelib.so'] Common subdirectories : ['Tests'] diff debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree/Tests debian/mgltools-bhtree/usr/lib/python2.6/dist-packages/bhtree/Tests Identical files : ['__init__.py', 'crn_crd.py', 'crn_crd_and_rad.py', 'cv_crd_and_rad.py', 'test.py', 'test_dependencies.py'] dh_strip -pmgltools-bhtree dh_strip debug symbol extraction: all non-arch-all packages for this build platform i386: mgltools-bhtree dh_strip debug symbol extraction: packages to act on: mgltools-bhtree dh_strip debug symbol extraction: ignored packages: dpkg-gencontrol: warning: package mgltools-bhtree: unknown substitution variable ${python:Versions} WARNING: not running pkgbinarymangler for this package, as requested dpkg-deb: building package `mgltools-bhtree-dbgsym' in `../mgltools-bhtree-dbgsym_1.5.4.cvs.20100912-1build1_i386.ddeb'. dh_compress -pmgltools-bhtree dh_fixperms -pmgltools-bhtree dh_makeshlibs -pmgltools-bhtree dh_installdeb -pmgltools-bhtree dh_perl -pmgltools-bhtree dh_shlibdeps -pmgltools-bhtree dpkg-shlibdeps: warning: dependency on libpthread.so.0 could be avoided if "debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree/_bhtreelib.so debian/mgltools-bhtree/usr/lib/python2.6/dist-packages/bhtree/_bhtreelib.so" were not uselessly linked against it (they use none of its symbols). dh_gencontrol -pmgltools-bhtree dh_scour -pmgltools-bhtree # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/mgltools-bhtree/usr/share/doc ] || \ [ -h debian/mgltools-bhtree/usr/share/doc/mgltools-bhtree ] || \ [ ! -d debian/mgltools-bhtree/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/mgltools-bhtree/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/mgltools-bhtree/usr/share/doc/mgltools-bhtree; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/mgltools-bhtree/usr/share/doc/mgltools-bhtree/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in mgltools-bhtree to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/mgltools-bhtree/usr/share/gnome/help ]; then \ cd debian/mgltools-bhtree && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p mgltools-bhtree dh_md5sums -pmgltools-bhtree dh_builddeb -pmgltools-bhtree INFO: pkgstriptranslations version 89 pkgstriptranslations: processing control file: ./debian/mgltools-bhtree/DEBIAN/control, package mgltools-bhtree, directory ./debian/mgltools-bhtree pkgstriptranslations: mgltools-bhtree does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/mgltools-bhtree/DEBIAN/control, package mgltools-bhtree, directory debian/mgltools-bhtree dpkg-deb: warning: 'debian/mgltools-bhtree/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: 'debian/mgltools-bhtree/DEBIAN/control' contains user-defined field 'Python-Version' dpkg-deb: warning: ignoring 2 warnings about the control file(s) dpkg-deb: building package `mgltools-bhtree' in `../mgltools-bhtree_1.5.4.cvs.20100912-1build1_i386.deb'. dpkg-genchanges -b -mUbuntu/i386 Build Daemon >../mgltools-bhtree_1.5.4.cvs.20100912-1build1_i386.changes dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build mgltools-bhtree-1.5.4.cvs.20100912 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20101212-1334 Publishing debug debs. chroot-autobuild/build/buildd/mgltools-bhtree_1.5.4.cvs.20100912-1build1_i386.deb: new debian package, version 2.0. size 97462 bytes: control archive= 1958 bytes. 833 bytes, 19 lines control 1260 bytes, 16 lines md5sums 361 bytes, 11 lines * postinst #!/bin/sh 283 bytes, 10 lines * preinst #!/bin/sh 1231 bytes, 47 lines * prerm #!/bin/sh Package: mgltools-bhtree Version: 1.5.4.cvs.20100912-1build1 Architecture: i386 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 452 Depends: libc6 (>= 2.4), python (<< 2.8), python (>= 2.6), python-central (>= 0.6.11) Enhances: autodocktools Section: non-free/science Priority: optional Homepage: http://mgltools.scripps.edu/ Description: Bhtree library extension module This package is part of the mgltools set of Python libraries which provide an infrastructure for the analysis of protein structures and their docking of chemical compounds. . Python binding for looking Barnes-Hut tree code used for finding neighboring points (e.g. when building bonds by distance). Python-Version: 2.6, 2.7 chroot-autobuild/build/buildd/mgltools-bhtree_1.5.4.cvs.20100912-1build1_i386.deb: drwxr-xr-x root/root 0 2010-12-12 13:34 ./ drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/ drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/lib/ drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/lib/python2.7/dist-packages/ drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/lib/python2.7/dist-packages/bhtree/ -rw-r--r-- root/root 128780 2010-12-12 13:34 ./usr/lib/python2.7/dist-packages/bhtree/_bhtreelib.so drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/lib/python2.6/ drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/lib/python2.6/dist-packages/ drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/lib/python2.6/dist-packages/bhtree/ -rw-r--r-- root/root 128780 2010-12-12 13:34 ./usr/lib/python2.6/dist-packages/bhtree/_bhtreelib.so drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/share/ drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/share/doc/ drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/share/doc/mgltools-bhtree/ -rw-r--r-- root/root 923 2005-06-28 22:06 ./usr/share/doc/mgltools-bhtree/README -rw-r--r-- root/root 1416 2010-12-12 13:33 ./usr/share/doc/mgltools-bhtree/README.Debian -rw-r--r-- root/root 3156 2010-12-12 13:33 ./usr/share/doc/mgltools-bhtree/copyright -rw-r--r-- root/root 561 2010-12-12 13:33 ./usr/share/doc/mgltools-bhtree/changelog.Debian.gz drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/share/pyshared/ drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/share/pyshared/bhtree/ drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/share/pyshared/bhtree/Tests/ -rw-r--r-- root/root 844 2006-03-15 21:38 ./usr/share/pyshared/bhtree/Tests/test_dependencies.py -rw-r--r-- root/root 1 2004-06-17 20:53 ./usr/share/pyshared/bhtree/Tests/__init__.py -rw-r--r-- root/root 10944 2004-06-17 20:53 ./usr/share/pyshared/bhtree/Tests/crn_crd.py -rw-r--r-- root/root 9052 2007-07-30 21:21 ./usr/share/pyshared/bhtree/Tests/test.py -rw-r--r-- root/root 2658 2004-06-17 20:53 ./usr/share/pyshared/bhtree/Tests/cv_crd_and_rad.py -rw-r--r-- root/root 14800 2004-06-17 20:53 ./usr/share/pyshared/bhtree/Tests/crn_crd_and_rad.py -rw-r--r-- root/root 125 2006-03-09 22:14 ./usr/share/pyshared/bhtree/__init__.py -rw-r--r-- root/root 25069 2010-12-12 13:34 ./usr/share/pyshared/bhtree/bhtreelib.py -rw-r--r-- root/root 283 2010-12-12 13:34 ./usr/share/pyshared/bhtree-1.5.4.egg-info drwxr-xr-x root/root 0 2010-12-12 13:34 ./usr/share/pyshared-data/ -rw-r--r-- root/root 795 2010-12-12 13:34 ./usr/share/pyshared-data/mgltools-bhtree mgltools-bhtree_1.5.4.cvs.20100912-1build1_i386.changes: Format: 1.8 Date: Sun, 12 Dec 2010 15:10:51 +0200 Source: mgltools-bhtree Binary: mgltools-bhtree Architecture: i386 Version: 1.5.4.cvs.20100912-1build1 Distribution: natty Urgency: low Maintainer: Ubuntu/i386 Build Daemon Changed-By: Stefano Rivera Description: mgltools-bhtree - Bhtree library extension module Changes: mgltools-bhtree (1.5.4.cvs.20100912-1build1) natty; urgency=low . * No-change rebuild for Python 2.7 support. Checksums-Sha1: 02aa7d4629c793264f3d0fb01f71bcbca26a8f44 97462 mgltools-bhtree_1.5.4.cvs.20100912-1build1_i386.deb Checksums-Sha256: bfb0c45bd33e109a77321fd7f2e67d58522845dc0f4a8f43f96fbdf56fe7c91f 97462 mgltools-bhtree_1.5.4.cvs.20100912-1build1_i386.deb Files: b4d8e93de80923b75beeac057cbf4fdd 97462 non-free/science optional mgltools-bhtree_1.5.4.cvs.20100912-1build1_i386.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/mgltools-bhtree-1.5.4.cvs.20100912 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --purge groff-base python2.6-minimal mime-support m4 gettext file zlib1g-dev libhtml-parser-perl intltool libwww-perl liburi-perl libhtml-tree-perl autotools-dev po-debconf python-numpy swig python2.6 libxml-parser-perl libcroco3 libhtml-tagset-perl python-support libxml2 libpython2.6 automake python-scour python-all-dev python-all python-dev man-db intltool-debian python2.7-dev python2.7 liblapack3gf libexpat1-dev libpython2.7 cdbs html2text gettext-base python2.6-dev debhelper libunistring0 python python-central libblas3gf libmagic1 libpipeline1 libgfortran3 libexpat1 libsqlite3-0 libssl-dev bsdmainutils fdupes autoconf (Reading database ... 19440 files and directories currently installed.) Removing python-numpy ... Removing swig ... Removing python-support ... Purging configuration files for python-support ... Removing python-all-dev ... Removing python-all ... Removing python-dev ... Removing python2.7-dev ... Removing liblapack3gf ... Purging configuration files for liblapack3gf ... Removing libexpat1-dev ... Removing libpython2.7 ... Purging configuration files for libpython2.7 ... Removing cdbs ... Removing debhelper ... Removing python-central ... Purging configuration files for python-central ... Removing libblas3gf ... Purging configuration files for libblas3gf ... Removing libgfortran3 ... Purging configuration files for libgfortran3 ... Removing fdupes ... Removing intltool ... Removing po-debconf ... Removing libxml-parser-perl ... Removing automake ... Removing python-scour ... Removing man-db ... Purging configuration files for man-db ... Removing catpages as well as /var/cache/man hierarchy. Removing intltool-debian ... Removing html2text ... Purging configuration files for html2text ... Removing python ... Purging configuration files for python ... Removing libpipeline1 ... Purging configuration files for libpipeline1 ... Removing bsdmainutils ... Purging configuration files for bsdmainutils ... Removing autoconf ... Purging configuration files for autoconf ... Removing groff-base ... Purging configuration files for groff-base ... Removing m4 ... Removing gettext ... Removing file ... Removing libwww-perl ... Removing libhtml-tree-perl ... Removing autotools-dev ... Removing libcroco3 ... Purging configuration files for libcroco3 ... Removing libxml2 ... Purging configuration files for libxml2 ... Removing python2.7 ... Purging configuration files for python2.7 ... Removing gettext-base ... Removing libunistring0 ... Purging configuration files for libunistring0 ... Removing libmagic1 ... Purging configuration files for libmagic1 ... Removing libhtml-parser-perl ... Removing liburi-perl ... Removing libhtml-tagset-perl ... Removing libpython2.6 ... Purging configuration files for libpython2.6 ... Removing python2.6 ... Purging configuration files for python2.6 ... Removing python2.6-dev ... Removing libexpat1 ... Purging configuration files for libexpat1 ... Removing libsqlite3-0 ... Purging configuration files for libsqlite3-0 ... Removing libssl-dev ... Removing python2.6-minimal ... Unlinking and removing bytecode for runtime python2.6 Purging configuration files for python2.6-minimal ... Removing mime-support ... Purging configuration files for mime-support ... Removing zlib1g-dev ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place ****************************************************************************** Finished at 20101212-1334 Build needed 00:00:28, 3248k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', 'ac1dcb552cd487d9a343985d001bd2747aa7d9bc'] Scanning for processes to kill in build /home/buildd/build-ac1dcb552cd487d9a343985d001bd2747aa7d9bc/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'ac1dcb552cd487d9a343985d001bd2747aa7d9bc'] Unmounting chroot for build ac1dcb552cd487d9a343985d001bd2747aa7d9bc... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'ac1dcb552cd487d9a343985d001bd2747aa7d9bc'] Removing build ac1dcb552cd487d9a343985d001bd2747aa7d9bc