RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux twombly 3.8.0-mustang_sw_1.07.04-Alpha #1 SMP Sat Sep 14 09:50:58 MDT 2013 aarch64 Buildd toolchain package versions: launchpad-buildd_119~APM.12.04.2 python-lpbuildd_119~APM.12.04.2. Syncing the system clock with the buildd NTP service... 26 Oct 09:30:41 ntpdate[18835]: adjust time server 10.211.37.1 offset -0.011155 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-5123150', '/home/buildd/filecache-default/b26b22d5e9534fc8f0f6f99171885be7b2b8539d'] Unpacking chroot for build PACKAGEBUILD-5123150 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-5123150'] Mounting chroot for build PACKAGEBUILD-5123150 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-5123150', 'deb http://ftpmaster.internal/ubuntu trusty main restricted universe multiverse'] Overriding sources.list in build-PACKAGEBUILD-5123150 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-5123150', 'arm64'] Updating debian chroot for build PACKAGEBUILD-5123150 Ign http://ftpmaster.internal trusty InRelease Ign http://archive-team.internal trusty InRelease Get:1 http://ftpmaster.internal trusty Release.gpg [933 B] Ign http://archive-team.internal trusty Release.gpg Get:2 http://ftpmaster.internal trusty Release [49.6 kB] Hit http://archive-team.internal trusty Release Ign http://archive-team.internal trusty/main arm64 Packages/DiffIndex Get:3 http://ftpmaster.internal trusty/main arm64 Packages [1157 kB] Ign http://archive-team.internal trusty/main Translation-en Hit http://archive-team.internal trusty/main arm64 Packages Get:4 http://ftpmaster.internal trusty/restricted arm64 Packages [14 B] Get:5 http://ftpmaster.internal trusty/universe arm64 Packages [4599 kB] Get:6 http://ftpmaster.internal trusty/multiverse arm64 Packages [84.3 kB] Get:7 http://ftpmaster.internal trusty/main Translation-en [721 kB] Get:8 http://ftpmaster.internal trusty/multiverse Translation-en [102 kB] Get:9 http://ftpmaster.internal trusty/restricted Translation-en [2686 B] Get:10 http://ftpmaster.internal trusty/universe Translation-en [3969 kB] Fetched 10.7 MB in 11s (903 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: busybox-initramfs initramfs-tools initramfs-tools-bin kmod libdrm2 libkmod2 libldap-2.4-2 libmpfr4 libsqlite3-0 module-init-tools perl perl-base perl-modules upstart 14 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 11.0 MB of archives. After this operation, 2455 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! perl perl-base perl-modules libsqlite3-0 libdrm2 libkmod2 kmod module-init-tools libldap-2.4-2 libmpfr4 busybox-initramfs initramfs-tools initramfs-tools-bin upstart Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main perl arm64 5.18.1-4 [3937 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main perl-base arm64 5.18.1-4 [1473 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main perl-modules all 5.18.1-4 [3926 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main libsqlite3-0 arm64 3.8.0.2-1ubuntu1 [346 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main libdrm2 arm64 2.4.46-3ubuntu1 [22.8 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main libkmod2 arm64 15-0ubuntu2 [36.6 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main kmod arm64 15-0ubuntu2 [85.9 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main module-init-tools all 15-0ubuntu2 [1874 B] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main libldap-2.4-2 arm64 2.4.31-1+nmu2ubuntu4 [159 kB] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main libmpfr4 arm64 3.1.2-1 [207 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main busybox-initramfs arm64 1:1.20.0-9ubuntu2 [186 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main initramfs-tools all 0.103ubuntu2 [49.2 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main initramfs-tools-bin arm64 0.103ubuntu2 [9510 B] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main upstart arm64 1.10-0ubuntu8 [521 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 11.0 MB in 8s (1231 kB/s) (Reading database ... 11942 files and directories currently installed.) Preparing to replace perl 5.14.2-21build1 (using .../perl_5.18.1-4_arm64.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.14.2-21build1 (using .../perl-base_5.18.1-4_arm64.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.18.1-4) ... (Reading database ... 11844 files and directories currently installed.) Preparing to replace perl-modules 5.14.2-21build1 (using .../perl-modules_5.18.1-4_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace libsqlite3-0:arm64 3.7.17-1ubuntu1 (using .../libsqlite3-0_3.8.0.2-1ubuntu1_arm64.deb) ... Unpacking replacement libsqlite3-0:arm64 ... Preparing to replace libdrm2:arm64 2.4.46-3 (using .../libdrm2_2.4.46-3ubuntu1_arm64.deb) ... Unpacking replacement libdrm2:arm64 ... Preparing to replace libkmod2:arm64 9-3ubuntu1 (using .../libkmod2_15-0ubuntu2_arm64.deb) ... Unpacking replacement libkmod2:arm64 ... Preparing to replace kmod 9-3ubuntu1 (using .../kmod_15-0ubuntu2_arm64.deb) ... Unpacking replacement kmod ... Preparing to replace module-init-tools 9-3ubuntu1 (using .../module-init-tools_15-0ubuntu2_all.deb) ... Unpacking replacement module-init-tools ... Preparing to replace libldap-2.4-2:arm64 2.4.31-1+nmu2ubuntu3 (using .../libldap-2.4-2_2.4.31-1+nmu2ubuntu4_arm64.deb) ... Unpacking replacement libldap-2.4-2:arm64 ... Preparing to replace libmpfr4:arm64 3.1.1-2 (using .../libmpfr4_3.1.2-1_arm64.deb) ... Unpacking replacement libmpfr4:arm64 ... Preparing to replace busybox-initramfs 1:1.20.0-9ubuntu1 (using .../busybox-initramfs_1%3a1.20.0-9ubuntu2_arm64.deb) ... Unpacking replacement busybox-initramfs ... Preparing to replace initramfs-tools 0.103ubuntu1 (using .../initramfs-tools_0.103ubuntu2_all.deb) ... Unpacking replacement initramfs-tools ... Preparing to replace initramfs-tools-bin 0.103ubuntu1 (using .../initramfs-tools-bin_0.103ubuntu2_arm64.deb) ... Unpacking replacement initramfs-tools-bin ... Preparing to replace upstart 1.10-0ubuntu7 (using .../upstart_1.10-0ubuntu8_arm64.deb) ... Unpacking replacement upstart ... Setting up libsqlite3-0:arm64 (3.8.0.2-1ubuntu1) ... Setting up libdrm2:arm64 (2.4.46-3ubuntu1) ... Setting up libkmod2:arm64 (15-0ubuntu2) ... Setting up kmod (15-0ubuntu2) ... Setting up module-init-tools (15-0ubuntu2) ... Setting up libldap-2.4-2:arm64 (2.4.31-1+nmu2ubuntu4) ... Setting up libmpfr4:arm64 (3.1.2-1) ... Setting up busybox-initramfs (1:1.20.0-9ubuntu2) ... Setting up initramfs-tools-bin (0.103ubuntu2) ... Setting up initramfs-tools (0.103ubuntu2) ... update-initramfs: deferring update (trigger activated) Setting up upstart (1.10-0ubuntu8) ... Setting up perl-modules (5.18.1-4) ... Setting up perl (5.18.1-4) ... Processing triggers for libc-bin ... Processing triggers for initramfs-tools ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-5123150', 'arm64', 'trusty', '--nolog', '--batch', '--archive=ubuntu', '--dist=trusty', '--purpose=PRIMARY', '--architecture=arm64', '--comp=multiverse', 'mgltools-bhtree_1.5.7~rc1~cvs.20130519-1.dsc'] Initiating build PACKAGEBUILD-5123150 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 3.8.0-mustang_sw_1.07.04-Alpha #1 SMP Sat Sep 14 09:50:58 MDT 2013 aarch64 Automatic build of mgltools-bhtree_1.5.7~rc1~cvs.20130519-1 on twombly by sbuild/arm64 1.170.5 Build started at 20131026-0931 ****************************************************************************** mgltools-bhtree_1.5.7~rc1~cvs.20130519-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 8), python-all-dev (>= 2.6), python-numpy, swig (>= 1.3.20) Checking for already installed source dependencies... debhelper: missing python-all-dev: missing python-numpy: missing swig: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper python-all-dev python-numpy swig Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: apparmor-easyprof bsdmainutils dh-apparmor dh-python file gettext gettext-base groff-base intltool-debian libasprintf0c2 libblas3 libcroco3 libexpat1 libexpat1-dev libffi6 libgfortran3 libglib2.0-0 liblapack3 libmagic1 libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libssl1.0.0 libunistring0 libxml2 man-db mime-support po-debconf python python-all python-dev python-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.3 python3.3-minimal swig2.0 Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser libmail-box-perl python-doc python-tk python-numpy-doc python-numpy-dbg python-nose gfortran python2.7-doc binfmt-support python3-doc python3-tk python3.3-doc swig-doc swig-examples swig2.0-examples swig2.0-doc Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl The following NEW packages will be installed: apparmor-easyprof bsdmainutils debhelper dh-apparmor dh-python file gettext gettext-base groff-base intltool-debian libasprintf0c2 libblas3 libcroco3 libexpat1 libexpat1-dev libffi6 libgfortran3 libglib2.0-0 liblapack3 libmagic1 libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal libpython3.3-stdlib libssl1.0.0 libunistring0 libxml2 man-db mime-support po-debconf python python-all python-all-dev python-dev python-minimal python-numpy python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.3 python3.3-minimal swig swig2.0 0 upgraded, 52 newly installed, 0 to remove and 0 not upgraded. Need to get 26.6 MB of archives. After this operation, 90.3 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libexpat1 libffi6 libmagic1 libssl1.0.0 libpython3.3-minimal mime-support libpython3.3-stdlib python3.3-minimal libasprintf0c2 libglib2.0-0 libpipeline1 libxml2 groff-base bsdmainutils man-db libcroco3 libgfortran3 libpython2.7-minimal libpython2.7-stdlib libpython2.7 libexpat1-dev libpython2.7-dev libunistring0 python2.7-minimal python3.3 python3-minimal libpython3-stdlib python3 dh-python file gettext-base gettext intltool-debian po-debconf apparmor-easyprof dh-apparmor debhelper libblas3 liblapack3 libpython-dev libpython-all-dev libpython-stdlib python2.7 python-minimal python python-all python2.7-dev python-dev python-all-dev python-numpy swig2.0 swig Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1 arm64 2.1.0-4 [114 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main libffi6 arm64 3.0.13-4 [19.0 kB] Get:3 http://ftpmaster.internal/ubuntu/ trusty/main libmagic1 arm64 5.11-2ubuntu4 [163 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main libssl1.0.0 arm64 1.0.1e-3ubuntu1 [860 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.3-minimal arm64 3.3.2-7ubuntu3 [609 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main mime-support all 3.54ubuntu1 [31.7 kB] Get:7 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.3-stdlib arm64 3.3.2-7ubuntu3 [2568 kB] Get:8 http://ftpmaster.internal/ubuntu/ trusty/main python3.3-minimal arm64 3.3.2-7ubuntu3 [1431 kB] Get:9 http://ftpmaster.internal/ubuntu/ trusty/main libasprintf0c2 arm64 0.18.3.1-1ubuntu1 [7172 B] Get:10 http://ftpmaster.internal/ubuntu/ trusty/main libglib2.0-0 arm64 2.38.1-1 [827 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main libpipeline1 arm64 1.2.4-1 [24.5 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main libxml2 arm64 2.9.1+dfsg1-3ubuntu2 [588 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main groff-base arm64 1.22.2-3 [688 kB] Get:14 http://ftpmaster.internal/ubuntu/ trusty/main bsdmainutils arm64 9.0.5ubuntu1 [199 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main man-db arm64 2.6.5-2 [678 kB] Get:16 http://ftpmaster.internal/ubuntu/ trusty/main libcroco3 arm64 0.6.8-2 [64.9 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main libgfortran3 arm64 4.8.2-1ubuntu2 [262 kB] Get:18 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-minimal arm64 2.7.5-8ubuntu3 [499 kB] Get:19 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-stdlib arm64 2.7.5-8ubuntu3 [2332 kB] Get:20 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7 arm64 2.7.5-8ubuntu3 [1149 kB] Get:21 http://ftpmaster.internal/ubuntu/ trusty/main libexpat1-dev arm64 2.1.0-4 [183 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main libpython2.7-dev arm64 2.7.5-8ubuntu3 [3313 kB] Get:23 http://ftpmaster.internal/ubuntu/ trusty/main libunistring0 arm64 0.9.3-5ubuntu1 [403 kB] Get:24 http://ftpmaster.internal/ubuntu/ trusty/main python2.7-minimal arm64 2.7.5-8ubuntu3 [1192 kB] Get:25 http://ftpmaster.internal/ubuntu/ trusty/main python3.3 arm64 3.3.2-7ubuntu3 [129 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty/main python3-minimal arm64 3.3.2-14ubuntu1 [26.4 kB] Get:27 http://ftpmaster.internal/ubuntu/ trusty/main libpython3-stdlib arm64 3.3.2-14ubuntu1 [8144 B] Get:28 http://ftpmaster.internal/ubuntu/ trusty/main python3 arm64 3.3.2-14ubuntu1 [9144 B] Get:29 http://ftpmaster.internal/ubuntu/ trusty/main dh-python all 1.20131003-1 [61.7 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty/main file arm64 5.11-2ubuntu4 [18.2 kB] Get:31 http://ftpmaster.internal/ubuntu/ trusty/main gettext-base arm64 0.18.3.1-1ubuntu1 [64.0 kB] Get:32 http://ftpmaster.internal/ubuntu/ trusty/main gettext arm64 0.18.3.1-1ubuntu1 [983 kB] Get:33 http://ftpmaster.internal/ubuntu/ trusty/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:34 http://ftpmaster.internal/ubuntu/ trusty/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:35 http://ftpmaster.internal/ubuntu/ trusty/main apparmor-easyprof all 2.8.0-0ubuntu32 [23.3 kB] Get:36 http://ftpmaster.internal/ubuntu/ trusty/main dh-apparmor all 2.8.0-0ubuntu32 [7830 B] Get:37 http://ftpmaster.internal/ubuntu/ trusty/main debhelper all 9.20130921ubuntu1 [635 kB] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main libblas3 arm64 1.2.20110419-7 [172 kB] Get:39 http://ftpmaster.internal/ubuntu/ trusty/main liblapack3 arm64 3.4.2+dfsg-4 [2262 kB] Get:40 http://ftpmaster.internal/ubuntu/ trusty/main libpython-dev arm64 2.7.5-5ubuntu1 [7850 B] Get:41 http://ftpmaster.internal/ubuntu/ trusty/main libpython-all-dev arm64 2.7.5-5ubuntu1 [950 B] Get:42 http://ftpmaster.internal/ubuntu/ trusty/main libpython-stdlib arm64 2.7.5-5ubuntu1 [7770 B] Get:43 http://ftpmaster.internal/ubuntu/ trusty/main python2.7 arm64 2.7.5-8ubuntu3 [192 kB] Get:44 http://ftpmaster.internal/ubuntu/ trusty/main python-minimal arm64 2.7.5-5ubuntu1 [31.5 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main python arm64 2.7.5-5ubuntu1 [173 kB] Get:46 http://ftpmaster.internal/ubuntu/ trusty/main python-all arm64 2.7.5-5ubuntu1 [938 B] Get:47 http://ftpmaster.internal/ubuntu/ trusty/main python2.7-dev arm64 2.7.5-8ubuntu3 [286 kB] Get:48 http://ftpmaster.internal/ubuntu/ trusty/main python-dev arm64 2.7.5-5ubuntu1 [1132 B] Get:49 http://ftpmaster.internal/ubuntu/ trusty/main python-all-dev arm64 2.7.5-5ubuntu1 [956 B] Get:50 http://ftpmaster.internal/ubuntu/ trusty/main python-numpy arm64 1:1.7.1-1ubuntu1 [1889 kB] Get:51 http://ftpmaster.internal/ubuntu/ trusty/main swig2.0 arm64 2.0.10-0ubuntu2 [1180 kB] Get:52 http://ftpmaster.internal/ubuntu/ trusty/main swig arm64 2.0.10-0ubuntu2 [6680 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 26.6 MB in 26s (1017 kB/s) Selecting previously unselected package libexpat1:arm64. (Reading database ... 11884 files and directories currently installed.) Unpacking libexpat1:arm64 (from .../libexpat1_2.1.0-4_arm64.deb) ... Selecting previously unselected package libffi6:arm64. Unpacking libffi6:arm64 (from .../libffi6_3.0.13-4_arm64.deb) ... Selecting previously unselected package libmagic1:arm64. Unpacking libmagic1:arm64 (from .../libmagic1_5.11-2ubuntu4_arm64.deb) ... Selecting previously unselected package libssl1.0.0:arm64. Unpacking libssl1.0.0:arm64 (from .../libssl1.0.0_1.0.1e-3ubuntu1_arm64.deb) ... Selecting previously unselected package libpython3.3-minimal:arm64. Unpacking libpython3.3-minimal:arm64 (from .../libpython3.3-minimal_3.3.2-7ubuntu3_arm64.deb) ... Selecting previously unselected package mime-support. Unpacking mime-support (from .../mime-support_3.54ubuntu1_all.deb) ... Selecting previously unselected package libpython3.3-stdlib:arm64. Unpacking libpython3.3-stdlib:arm64 (from .../libpython3.3-stdlib_3.3.2-7ubuntu3_arm64.deb) ... Selecting previously unselected package python3.3-minimal. Unpacking python3.3-minimal (from .../python3.3-minimal_3.3.2-7ubuntu3_arm64.deb) ... Selecting previously unselected package libasprintf0c2:arm64. Unpacking libasprintf0c2:arm64 (from .../libasprintf0c2_0.18.3.1-1ubuntu1_arm64.deb) ... Selecting previously unselected package libglib2.0-0:arm64. Unpacking libglib2.0-0:arm64 (from .../libglib2.0-0_2.38.1-1_arm64.deb) ... Selecting previously unselected package libpipeline1:arm64. Unpacking libpipeline1:arm64 (from .../libpipeline1_1.2.4-1_arm64.deb) ... Selecting previously unselected package libxml2:arm64. Unpacking libxml2:arm64 (from .../libxml2_2.9.1+dfsg1-3ubuntu2_arm64.deb) ... Selecting previously unselected package groff-base. Unpacking groff-base (from .../groff-base_1.22.2-3_arm64.deb) ... Selecting previously unselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_9.0.5ubuntu1_arm64.deb) ... Selecting previously unselected package man-db. Unpacking man-db (from .../man-db_2.6.5-2_arm64.deb) ... Selecting previously unselected package libcroco3:arm64. Unpacking libcroco3:arm64 (from .../libcroco3_0.6.8-2_arm64.deb) ... Selecting previously unselected package libgfortran3:arm64. Unpacking libgfortran3:arm64 (from .../libgfortran3_4.8.2-1ubuntu2_arm64.deb) ... Selecting previously unselected package libpython2.7-minimal:arm64. Unpacking libpython2.7-minimal:arm64 (from .../libpython2.7-minimal_2.7.5-8ubuntu3_arm64.deb) ... Selecting previously unselected package libpython2.7-stdlib:arm64. Unpacking libpython2.7-stdlib:arm64 (from .../libpython2.7-stdlib_2.7.5-8ubuntu3_arm64.deb) ... Selecting previously unselected package libpython2.7:arm64. Unpacking libpython2.7:arm64 (from .../libpython2.7_2.7.5-8ubuntu3_arm64.deb) ... Selecting previously unselected package libexpat1-dev:arm64. Unpacking libexpat1-dev:arm64 (from .../libexpat1-dev_2.1.0-4_arm64.deb) ... Selecting previously unselected package libpython2.7-dev:arm64. Unpacking libpython2.7-dev:arm64 (from .../libpython2.7-dev_2.7.5-8ubuntu3_arm64.deb) ... Selecting previously unselected package libunistring0:arm64. Unpacking libunistring0:arm64 (from .../libunistring0_0.9.3-5ubuntu1_arm64.deb) ... Selecting previously unselected package python2.7-minimal. Unpacking python2.7-minimal (from .../python2.7-minimal_2.7.5-8ubuntu3_arm64.deb) ... Selecting previously unselected package python3.3. Unpacking python3.3 (from .../python3.3_3.3.2-7ubuntu3_arm64.deb) ... Selecting previously unselected package python3-minimal. Unpacking python3-minimal (from .../python3-minimal_3.3.2-14ubuntu1_arm64.deb) ... Selecting previously unselected package libpython3-stdlib:arm64. Unpacking libpython3-stdlib:arm64 (from .../libpython3-stdlib_3.3.2-14ubuntu1_arm64.deb) ... Selecting previously unselected package python3. Unpacking python3 (from .../python3_3.3.2-14ubuntu1_arm64.deb) ... Selecting previously unselected package dh-python. Unpacking dh-python (from .../dh-python_1.20131003-1_all.deb) ... Selecting previously unselected package file. Unpacking file (from .../file_5.11-2ubuntu4_arm64.deb) ... Selecting previously unselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.18.3.1-1ubuntu1_arm64.deb) ... Selecting previously unselected package gettext. Unpacking gettext (from .../gettext_0.18.3.1-1ubuntu1_arm64.deb) ... Selecting previously unselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously unselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2ubuntu1_all.deb) ... Selecting previously unselected package apparmor-easyprof. Unpacking apparmor-easyprof (from .../apparmor-easyprof_2.8.0-0ubuntu32_all.deb) ... Selecting previously unselected package dh-apparmor. Unpacking dh-apparmor (from .../dh-apparmor_2.8.0-0ubuntu32_all.deb) ... Selecting previously unselected package debhelper. Unpacking debhelper (from .../debhelper_9.20130921ubuntu1_all.deb) ... Selecting previously unselected package libblas3. Unpacking libblas3 (from .../libblas3_1.2.20110419-7_arm64.deb) ... Selecting previously unselected package liblapack3. Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-4_arm64.deb) ... Selecting previously unselected package libpython-dev:arm64. Unpacking libpython-dev:arm64 (from .../libpython-dev_2.7.5-5ubuntu1_arm64.deb) ... Selecting previously unselected package libpython-all-dev:arm64. Unpacking libpython-all-dev:arm64 (from .../libpython-all-dev_2.7.5-5ubuntu1_arm64.deb) ... Selecting previously unselected package libpython-stdlib:arm64. Unpacking libpython-stdlib:arm64 (from .../libpython-stdlib_2.7.5-5ubuntu1_arm64.deb) ... Selecting previously unselected package python2.7. Unpacking python2.7 (from .../python2.7_2.7.5-8ubuntu3_arm64.deb) ... Selecting previously unselected package python-minimal. Unpacking python-minimal (from .../python-minimal_2.7.5-5ubuntu1_arm64.deb) ... Selecting previously unselected package python. Unpacking python (from .../python_2.7.5-5ubuntu1_arm64.deb) ... Selecting previously unselected package python-all. Unpacking python-all (from .../python-all_2.7.5-5ubuntu1_arm64.deb) ... Selecting previously unselected package python2.7-dev. Unpacking python2.7-dev (from .../python2.7-dev_2.7.5-8ubuntu3_arm64.deb) ... Selecting previously unselected package python-dev. Unpacking python-dev (from .../python-dev_2.7.5-5ubuntu1_arm64.deb) ... Selecting previously unselected package python-all-dev. Unpacking python-all-dev (from .../python-all-dev_2.7.5-5ubuntu1_arm64.deb) ... Selecting previously unselected package python-numpy. Unpacking python-numpy (from .../python-numpy_1%3a1.7.1-1ubuntu1_arm64.deb) ... Selecting previously unselected package swig2.0. Unpacking swig2.0 (from .../swig2.0_2.0.10-0ubuntu2_arm64.deb) ... Selecting previously unselected package swig. Unpacking swig (from .../swig_2.0.10-0ubuntu2_arm64.deb) ... Setting up libexpat1:arm64 (2.1.0-4) ... Setting up libffi6:arm64 (3.0.13-4) ... Setting up libmagic1:arm64 (5.11-2ubuntu4) ... Setting up libssl1.0.0:arm64 (1.0.1e-3ubuntu1) ... Setting up libpython3.3-minimal:arm64 (3.3.2-7ubuntu3) ... Setting up mime-support (3.54ubuntu1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode Setting up libpython3.3-stdlib:arm64 (3.3.2-7ubuntu3) ... Setting up python3.3-minimal (3.3.2-7ubuntu3) ... Setting up libasprintf0c2:arm64 (0.18.3.1-1ubuntu1) ... Setting up libglib2.0-0:arm64 (2.38.1-1) ... No schema files found: doing nothing. Setting up libpipeline1:arm64 (1.2.4-1) ... Setting up libxml2:arm64 (2.9.1+dfsg1-3ubuntu2) ... Setting up groff-base (1.22.2-3) ... Setting up bsdmainutils (9.0.5ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.6.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libcroco3:arm64 (0.6.8-2) ... Setting up libgfortran3:arm64 (4.8.2-1ubuntu2) ... Setting up libpython2.7-minimal:arm64 (2.7.5-8ubuntu3) ... Setting up libpython2.7-stdlib:arm64 (2.7.5-8ubuntu3) ... Setting up libpython2.7:arm64 (2.7.5-8ubuntu3) ... Setting up libexpat1-dev:arm64 (2.1.0-4) ... Setting up libpython2.7-dev:arm64 (2.7.5-8ubuntu3) ... Setting up libunistring0:arm64 (0.9.3-5ubuntu1) ... Setting up python2.7-minimal (2.7.5-8ubuntu3) ... Linking and byte-compiling packages for runtime python2.7... Setting up python3.3 (3.3.2-7ubuntu3) ... Setting up python3-minimal (3.3.2-14ubuntu1) ... Setting up libpython3-stdlib:arm64 (3.3.2-14ubuntu1) ... Setting up file (5.11-2ubuntu4) ... Setting up gettext-base (0.18.3.1-1ubuntu1) ... Setting up gettext (0.18.3.1-1ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up libblas3 (1.2.20110419-7) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up liblapack3 (3.4.2+dfsg-4) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libpython-dev:arm64 (2.7.5-5ubuntu1) ... Setting up libpython-all-dev:arm64 (2.7.5-5ubuntu1) ... Setting up libpython-stdlib:arm64 (2.7.5-5ubuntu1) ... Setting up python2.7 (2.7.5-8ubuntu3) ... Setting up python-minimal (2.7.5-5ubuntu1) ... Setting up python (2.7.5-5ubuntu1) ... Setting up python-all (2.7.5-5ubuntu1) ... Setting up python2.7-dev (2.7.5-8ubuntu3) ... Setting up python-dev (2.7.5-5ubuntu1) ... Setting up python-all-dev (2.7.5-5ubuntu1) ... Setting up python-numpy (1:1.7.1-1ubuntu1) ... Setting up swig2.0 (2.0.10-0ubuntu2) ... Setting up swig (2.0.10-0ubuntu2) ... Setting up python3 (3.3.2-14ubuntu1) ... running python rtupdate hooks for python3.3... running python post-rtupdate hooks for python3.3... Setting up dh-python (1.20131003-1) ... Setting up apparmor-easyprof (2.8.0-0ubuntu32) ... Setting up dh-apparmor (2.8.0-0ubuntu32) ... Setting up debhelper (9.20130921ubuntu1) ... Processing triggers for libc-bin ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.17-93ubuntu4 make_3.81-8.2ubuntu3 dpkg-dev_1.16.12ubuntu1 gcc-4.8_4.8.2-1ubuntu2 g++-4.8_4.8.2-1ubuntu2 binutils_2.23.90.20131017-1ubuntu1 libstdc++-4.8-dev_4.8.2-1ubuntu2 libstdc++6_4.8.2-1ubuntu2 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Fri May 31 17:26:37 2013 UTC using DSA key ID 54B99890 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./mgltools-bhtree_1.5.7~rc1~cvs.20130519-1.dsc dpkg-source: info: extracting mgltools-bhtree in mgltools-bhtree-1.5.7~rc1~cvs.20130519 dpkg-source: info: unpacking mgltools-bhtree_1.5.7~rc1~cvs.20130519.orig.tar.gz dpkg-source: info: unpacking mgltools-bhtree_1.5.7~rc1~cvs.20130519-1.debian.tar.gz dpkg-buildpackage: source package mgltools-bhtree dpkg-buildpackage: source version 1.5.7~rc1~cvs.20130519-1 dpkg-source --before-build mgltools-bhtree-1.5.7~rc1~cvs.20130519 dpkg-buildpackage: host architecture arm64 /usr/bin/fakeroot debian/rules clean dh clean --with python2 dh_testdir dh_auto_clean running clean 'build/lib.linux-aarch64-2.7' does not exist -- can't clean it 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it debian/rules override_dh_clean make[1]: Entering directory `/build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519' dh_clean find . -name CVS -a -type d| xargs -r rm -r rm -rf build build-stamp debian/Pmv rm -rf debian/tmpbuild rm -rf bhtree/bhtreelib.py bhtree/bhtreelib_wrap.c make[1]: Leaving directory `/build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519' debian/rules build-arch dh build-arch --with python2 dh_testdir -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory `/build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519' for i in 2.7; do \ python$i setup.py install --install-platlib=`pwd`/debian/tmpbuild; \ done running install running build running build_ext building '_bhtreelib' extension swigging bhtree/bhtreelib.i to bhtree/bhtreelib_wrap.c swig -python -o bhtree/bhtreelib_wrap.c bhtree/bhtreelib.i bhtree/bhtreelib.i:13: Warning 124: Specifying the language name in %typemap is deprecated - use #ifdef SWIG instead. bhtree/bhtreelib.i:206: Warning 521: Illegal destructor name BHtree::~BHTree(). Ignored. creating build creating build/temp.linux-aarch64-2.7 creating build/temp.linux-aarch64-2.7/bhtree creating build/temp.linux-aarch64-2.7/src aarch64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -I./src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c bhtree/bhtreelib_wrap.c -o build/temp.linux-aarch64-2.7/bhtree/bhtreelib_wrap.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1728:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:15, from bhtree/bhtreelib_wrap.c:2985: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" ^ bhtree/bhtreelib_wrap.c: In function 'contiguous_typed_array': bhtree/bhtreelib_wrap.c:3031:27: warning: format '%d' expects argument of type 'int', but argument 4 has type 'npy_intp' [-Wformat=] i, arr->dimensions[i], expectdims[i]); ^ bhtree/bhtreelib_wrap.c:2990:20: warning: unused variable 'itemsize' [-Wunused-variable] int i, numitems, itemsize; ^ bhtree/bhtreelib_wrap.c:2990:10: warning: unused variable 'numitems' [-Wunused-variable] int i, numitems, itemsize; ^ bhtree/bhtreelib_wrap.c: In function 'l_output_helper2': bhtree/bhtreelib_wrap.c:3046:17: warning: unused variable 'o3' [-Wunused-variable] PyObject* o3; ^ bhtree/bhtreelib_wrap.c: In function 'contiguous_typed_array1': bhtree/bhtreelib_wrap.c:3088:12: warning: comparison of distinct pointer types lacks a cast [enabled by default] if (arr!=obj) { ^ bhtree/bhtreelib_wrap.c:3123:27: warning: format '%d' expects argument of type 'int', but argument 4 has type 'npy_intp' [-Wformat=] i, arr->dimensions[i], expectdims[i]); ^ bhtree/bhtreelib_wrap.c:3073:20: warning: unused variable 'itemsize' [-Wunused-variable] int i, numitems, itemsize; ^ bhtree/bhtreelib_wrap.c:3073:10: warning: unused variable 'numitems' [-Wunused-variable] int i, numitems, itemsize; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_BHpoint_x_set': bhtree/bhtreelib_wrap.c:3677:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_xmin_set': bhtree/bhtreelib_wrap.c:4346:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_xmax_set': bhtree/bhtreelib_wrap.c:4413:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePoints': bhtree/bhtreelib_wrap.c:4865:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsDist': bhtree/bhtreelib_wrap.c:4948:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsDist2': bhtree/bhtreelib_wrap.c:5056:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closestPointsArrayDist2': bhtree/bhtreelib_wrap.c:5448:8: warning: assignment from incompatible pointer type [enabled by default] arg2 = (float *)xyzarr2->data; ^ bhtree/bhtreelib_wrap.c:5450:8: warning: assignment from incompatible pointer type [enabled by default] arg4 = (int *)malloc(arg3 * sizeof(int)); ^ bhtree/bhtreelib_wrap.c: In function '_wrap_findClosestAtomsDist2': bhtree/bhtreelib_wrap.c:6223:8: warning: assignment from incompatible pointer type [enabled by default] arg2 = (float *)xyzarr2->data; ^ bhtree/bhtreelib_wrap.c:6225:8: warning: assignment from incompatible pointer type [enabled by default] arg4 = (int *)malloc(arg3 * sizeof(int)); ^ bhtree/bhtreelib_wrap.c: In function '_wrap_TBHPoint_Pos_set': bhtree/bhtreelib_wrap.c:6339:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_TBHNode_xmin_set': bhtree/bhtreelib_wrap.c:7162:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_TBHNode_xmax_set': bhtree/bhtreelib_wrap.c:7229:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_xmin_set': bhtree/bhtreelib_wrap.c:7597:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_xmax_set': bhtree/bhtreelib_wrap.c:7664:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_ClosePoints': bhtree/bhtreelib_wrap.c:7971:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_ClosePointsDist2': bhtree/bhtreelib_wrap.c:8054:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_xmin_set': bhtree/bhtreelib_wrap.c:8414:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_xmax_set': bhtree/bhtreelib_wrap.c:8481:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_ClosePoints': bhtree/bhtreelib_wrap.c:9023:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_ClosePointsDist2': bhtree/bhtreelib_wrap.c:9106:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_MoveRBHPoint': bhtree/bhtreelib_wrap.c:9309:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_FindTBHNodeUp': bhtree/bhtreelib_wrap.c:9418:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_MoveTBHPoint': bhtree/bhtreelib_wrap.c:9543:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_MoveRBHPoint': bhtree/bhtreelib_wrap.c:10198:9: warning: unused variable 'i' [-Wunused-variable] int i; ^ bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePoints': bhtree/bhtreelib_wrap.c:4908:6: warning: 'array4' may be used uninitialized in this function [-Wmaybe-uninitialized] if (array4) ^ bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsDist': bhtree/bhtreelib_wrap.c:5012:6: warning: 'array4' may be used uninitialized in this function [-Wmaybe-uninitialized] if (array4) ^ bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closePointsDist2': bhtree/bhtreelib_wrap.c:5120:6: warning: 'array4' may be used uninitialized in this function [-Wmaybe-uninitialized] if (array4) ^ bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_ClosePoints': bhtree/bhtreelib_wrap.c:8014:6: warning: 'array4' may be used uninitialized in this function [-Wmaybe-uninitialized] if (array4) ^ bhtree/bhtreelib_wrap.c: In function '_wrap_TBHTree_ClosePointsDist2': bhtree/bhtreelib_wrap.c:8118:6: warning: 'array4' may be used uninitialized in this function [-Wmaybe-uninitialized] if (array4) ^ bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_ClosePoints': bhtree/bhtreelib_wrap.c:9066:6: warning: 'array4' may be used uninitialized in this function [-Wmaybe-uninitialized] if (array4) ^ bhtree/bhtreelib_wrap.c: In function '_wrap_RBHTree_ClosePointsDist2': bhtree/bhtreelib_wrap.c:9170:6: warning: 'array4' may be used uninitialized in this function [-Wmaybe-uninitialized] if (array4) ^ In file included from /usr/include/python2.7/Python.h:80:0, from bhtree/bhtreelib_wrap.c:125: bhtree/bhtreelib_wrap.c: In function '_wrap_BHtree_closestPointsArrayDist2': /usr/include/python2.7/object.h:772:28: warning: 'xyzarr2' may be used uninitialized in this function [-Wmaybe-uninitialized] --((PyObject*)(op))->ob_refcnt != 0) \ ^ bhtree/bhtreelib_wrap.c:5423:18: note: 'xyzarr2' was declared here PyArrayObject *xyzarr2 ; ^ In file included from /usr/include/python2.7/Python.h:80:0, from bhtree/bhtreelib_wrap.c:125: bhtree/bhtreelib_wrap.c: In function '_wrap_findClosestAtomsDist2': /usr/include/python2.7/object.h:772:28: warning: 'xyzarr2' may be used uninitialized in this function [-Wmaybe-uninitialized] --((PyObject*)(op))->ob_refcnt != 0) \ ^ bhtree/bhtreelib_wrap.c:6198:18: note: 'xyzarr2' was declared here PyArrayObject *xyzarr2 ; ^ aarch64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -I./src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/bhtree.c -o build/temp.linux-aarch64-2.7/src/bhtree.o src/bhtree.c: In function 'findBHcloseAtoms': src/bhtree.c:413:9: warning: unused variable 'n' [-Wunused-variable] int i,n; ^ creating build/lib.linux-aarch64-2.7 creating build/lib.linux-aarch64-2.7/bhtree aarch64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -Wformat -Werror=format-security build/temp.linux-aarch64-2.7/bhtree/bhtreelib_wrap.o build/temp.linux-aarch64-2.7/src/bhtree.o -o build/lib.linux-aarch64-2.7/bhtree/_bhtreelib.so running build_py copying bhtree/__init__.py -> build/lib.linux-aarch64-2.7/bhtree copying bhtree/bhtreelib.py -> build/lib.linux-aarch64-2.7/bhtree creating build/lib.linux-aarch64-2.7/bhtree/Tests copying bhtree/Tests/crn_crd.py -> build/lib.linux-aarch64-2.7/bhtree/Tests copying bhtree/Tests/cv_crd_and_rad.py -> build/lib.linux-aarch64-2.7/bhtree/Tests copying bhtree/Tests/__init__.py -> build/lib.linux-aarch64-2.7/bhtree/Tests copying bhtree/Tests/test_dependencies.py -> build/lib.linux-aarch64-2.7/bhtree/Tests copying bhtree/Tests/crn_crd_and_rad.py -> build/lib.linux-aarch64-2.7/bhtree/Tests copying bhtree/Tests/test.py -> build/lib.linux-aarch64-2.7/bhtree/Tests running install_lib creating /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild creating /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree copying build/lib.linux-aarch64-2.7/bhtree/bhtreelib.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree copying build/lib.linux-aarch64-2.7/bhtree/__init__.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree creating /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/Tests/crn_crd.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/Tests/cv_crd_and_rad.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/Tests/__init__.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/Tests/test_dependencies.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/Tests/crn_crd_and_rad.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/Tests/test.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/_bhtreelib.so -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree byte-compiling /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/bhtreelib.py to bhtreelib.pyc byte-compiling /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/__init__.py to __init__.pyc byte-compiling /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests/crn_crd.py to crn_crd.pyc byte-compiling /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests/cv_crd_and_rad.py to cv_crd_and_rad.pyc byte-compiling /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests/__init__.py to __init__.pyc byte-compiling /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests/test_dependencies.py to test_dependencies.pyc byte-compiling /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests/crn_crd_and_rad.py to crn_crd_and_rad.pyc byte-compiling /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree/Tests/test.py to test.pyc running install_egg_info Writing /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/tmpbuild/bhtree-1.5.6.egg-info make[1]: Leaving directory `/build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519' dh_auto_test -a /usr/bin/fakeroot debian/rules binary-arch dh binary-arch --with python2 dh_testroot -a dh_prep -a dh_auto_install -a running install running build running build_ext running build_py running install_lib creating /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr creating /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib creating /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7 creating /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages creating /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree copying build/lib.linux-aarch64-2.7/bhtree/bhtreelib.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree copying build/lib.linux-aarch64-2.7/bhtree/__init__.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree creating /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/Tests/crn_crd.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/Tests/cv_crd_and_rad.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/Tests/__init__.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/Tests/test_dependencies.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/Tests/crn_crd_and_rad.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/Tests/test.py -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree/Tests copying build/lib.linux-aarch64-2.7/bhtree/_bhtreelib.so -> /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree running install_egg_info Writing /build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519/debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree-1.5.6.egg-info debian/rules override_dh_install make[1]: Entering directory `/build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519' dh_install dh_numpy make[1]: Leaving directory `/build/buildd/mgltools-bhtree-1.5.7~rc1~cvs.20130519' dh_installdocs -a dh_installchangelogs -a dh_python2 -a dh_perl -a dh_link -a dh_compress -a dh_fixperms -a dh_strip -a dh_strip debug symbol extraction: all non-arch-all packages for this build platform arm64: mgltools-bhtree dh_strip debug symbol extraction: packages to act on: mgltools-bhtree dh_strip debug symbol extraction: ignored packages: dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-deb: building package `mgltools-bhtree-dbgsym' in `../mgltools-bhtree-dbgsym_1.5.7~rc1~cvs.20130519-1_arm64.ddeb'. dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/mgltools-bhtree/usr/lib/python2.7/dist-packages/bhtree/_bhtreelib.so was not linked against libpthread.so.0 (it uses none of the library's symbols) dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package mgltools-bhtree: unused substitution variable ${python:Versions} dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 118 pkgstriptranslations: processing mgltools-bhtree (in debian/mgltools-bhtree); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/mgltools-bhtree/DEBIAN/control, package mgltools-bhtree, directory debian/mgltools-bhtree pkgstripfiles: Truncating usr/share/doc/mgltools-bhtree/changelog.Debian.gz to topmost ten records pkgstripfiles: PNG optimization for package mgltools-bhtree took 0 s dpkg-deb: warning: 'debian/mgltools-bhtree/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `mgltools-bhtree' in `../mgltools-bhtree_1.5.7~rc1~cvs.20130519-1_arm64.deb'. dpkg-genchanges -B -mUbuntu Build Daemon >../mgltools-bhtree_1.5.7~rc1~cvs.20130519-1_arm64.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build mgltools-bhtree-1.5.7~rc1~cvs.20130519 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20131026-0932 Publishing debug debs. chroot-autobuild/build/buildd/mgltools-bhtree_1.5.7~rc1~cvs.20130519-1_arm64.deb: new debian package, version 2.0. size 58426 bytes: control archive=1394 bytes. 861 bytes, 18 lines control 1099 bytes, 14 lines md5sums 165 bytes, 9 lines * postinst #!/bin/sh 267 bytes, 14 lines * prerm #!/bin/sh Package: mgltools-bhtree Version: 1.5.7~rc1~cvs.20130519-1 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 283 Depends: libc6 (>= 2.17), python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python (>= 2.7), python (<< 2.8), python:any (>= 2.7.1-0ubuntu2) Enhances: autodocktools Section: non-free/science Priority: optional Homepage: http://mgltools.scripps.edu/ Description: Bhtree library extension module This package is part of the mgltools set of Python libraries which provide an infrastructure for the analysis of protein structures and their docking of chemical compounds. . Python binding for looking Barnes-Hut tree code used for finding neighboring points (e.g. when building bonds by distance). chroot-autobuild/build/buildd/mgltools-bhtree_1.5.7~rc1~cvs.20130519-1_arm64.deb: drwxr-xr-x root/root 0 2013-10-26 09:32 ./ drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/ drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/lib/ drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/ drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/bhtree/ drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/bhtree/Tests/ -rw-r--r-- root/root 146184 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/bhtree/_bhtreelib.so drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/lib/pyshared/ drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/lib/pyshared/python2.7/ drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/lib/pyshared/python2.7/bhtree/ drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/share/ drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/share/pyshared/ drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/share/pyshared/bhtree/ -rw-r--r-- root/root 25426 2013-10-26 09:32 ./usr/share/pyshared/bhtree/bhtreelib.py -rw-r--r-- root/root 125 2006-03-09 22:14 ./usr/share/pyshared/bhtree/__init__.py drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/share/pyshared/bhtree/Tests/ -rw-r--r-- root/root 10944 2004-06-17 19:53 ./usr/share/pyshared/bhtree/Tests/crn_crd.py -rw-r--r-- root/root 2658 2004-06-17 19:53 ./usr/share/pyshared/bhtree/Tests/cv_crd_and_rad.py -rw-r--r-- root/root 1 2004-06-17 19:53 ./usr/share/pyshared/bhtree/Tests/__init__.py -rw-r--r-- root/root 844 2006-03-15 21:38 ./usr/share/pyshared/bhtree/Tests/test_dependencies.py -rw-r--r-- root/root 14800 2004-06-17 19:53 ./usr/share/pyshared/bhtree/Tests/crn_crd_and_rad.py -rw-r--r-- root/root 10030 2010-03-12 22:32 ./usr/share/pyshared/bhtree/Tests/test.py -rw-r--r-- root/root 283 2013-10-26 09:32 ./usr/share/pyshared/bhtree-1.5.6.egg-info drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/share/doc/ drwxr-xr-x root/root 0 2013-10-26 09:32 ./usr/share/doc/mgltools-bhtree/ -rw-r--r-- root/root 4303 2013-05-31 17:09 ./usr/share/doc/mgltools-bhtree/copyright -rw-r--r-- root/root 841 2013-10-26 09:32 ./usr/share/doc/mgltools-bhtree/changelog.Debian.gz -rw-r--r-- root/root 923 2005-06-28 21:06 ./usr/share/doc/mgltools-bhtree/README -rw-r--r-- root/root 1417 2011-04-26 14:00 ./usr/share/doc/mgltools-bhtree/README.Debian lrwxrwxrwx root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/bhtree/bhtreelib.py -> ../../../../share/pyshared/bhtree/bhtreelib.py lrwxrwxrwx root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/bhtree/__init__.py -> ../../../../share/pyshared/bhtree/__init__.py lrwxrwxrwx root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/bhtree/Tests/crn_crd.py -> ../../../../../share/pyshared/bhtree/Tests/crn_crd.py lrwxrwxrwx root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/bhtree/Tests/cv_crd_and_rad.py -> ../../../../../share/pyshared/bhtree/Tests/cv_crd_and_rad.py lrwxrwxrwx root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/bhtree/Tests/__init__.py -> ../../../../../share/pyshared/bhtree/Tests/__init__.py lrwxrwxrwx root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/bhtree/Tests/test_dependencies.py -> ../../../../../share/pyshared/bhtree/Tests/test_dependencies.py lrwxrwxrwx root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/bhtree/Tests/crn_crd_and_rad.py -> ../../../../../share/pyshared/bhtree/Tests/crn_crd_and_rad.py lrwxrwxrwx root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/bhtree/Tests/test.py -> ../../../../../share/pyshared/bhtree/Tests/test.py lrwxrwxrwx root/root 0 2013-10-26 09:32 ./usr/lib/python2.7/dist-packages/bhtree-1.5.6.egg-info -> ../../../share/pyshared/bhtree-1.5.6.egg-info lrwxrwxrwx root/root 0 2013-10-26 09:32 ./usr/lib/pyshared/python2.7/bhtree/_bhtreelib.so -> ../../../python2.7/dist-packages/bhtree/_bhtreelib.so mgltools-bhtree_1.5.7~rc1~cvs.20130519-1_arm64.changes: Format: 1.8 Date: Sun, 19 May 2013 12:00:00 +0200 Source: mgltools-bhtree Binary: mgltools-bhtree Architecture: arm64 Version: 1.5.7~rc1~cvs.20130519-1 Distribution: trusty Urgency: low Maintainer: Ubuntu Build Daemon Changed-By: Thorsten Alteholz Description: mgltools-bhtree - Bhtree library extension module Changes: mgltools-bhtree (1.5.7~rc1~cvs.20130519-1) unstable; urgency=low . * New upstream version. * debian/control: remove DM-Upload-Allowed * debian/copyright: add permission for debian to distribute mgltools Checksums-Sha1: 41625044acc3490bd07453cc092f4161f28b8b0d 58426 mgltools-bhtree_1.5.7~rc1~cvs.20130519-1_arm64.deb Checksums-Sha256: 9fec8035527bcac4738498d59a44eeac9f08a61e985033fd50d91b8c803da621 58426 mgltools-bhtree_1.5.7~rc1~cvs.20130519-1_arm64.deb Files: 267edebb2ab5eaee6f8d7f60bc738b98 58426 non-free/science optional mgltools-bhtree_1.5.7~rc1~cvs.20130519-1_arm64.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20131026-0932 Build needed 00:00:25, 3496k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-5123150'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-5123150/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-5123150'] Unmounting chroot for build PACKAGEBUILD-5123150... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-5123150'] Removing build PACKAGEBUILD-5123150