https://launchpad.net/ubuntu/+source/mgltools-molkit/1.5.7-3/+build/16252333 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lgw01-amd64-029 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:40:15 UTC 2018 x86_64 Buildd toolchain package versions: launchpad-buildd_165 python-lpbuildd_165 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 8 Jan 23:17:10 ntpdate[1823]: adjust time server 10.211.37.1 offset -0.009006 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16252333 /home/buildd/filecache-default/020b0022f770b890c357907d03d82568c584d50e Creating target for build PACKAGEBUILD-16252333 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16252333 Starting target for build PACKAGEBUILD-16252333 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16252333 'deb http://ftpmaster.internal/ubuntu disco main restricted universe multiverse' 'deb http://ftpmaster.internal/ubuntu disco-security main restricted universe multiverse' 'deb http://ftpmaster.internal/ubuntu disco-updates main restricted universe multiverse' 'deb http://ftpmaster.internal/ubuntu disco-proposed main restricted universe multiverse' Overriding sources.list in build-PACKAGEBUILD-16252333 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16252333 Updating target for build PACKAGEBUILD-16252333 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 Packages [1007 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [514 kB] Get:7 http://ftpmaster.internal/ubuntu disco/restricted amd64 Packages [9964 B] Get:8 http://ftpmaster.internal/ubuntu disco/universe amd64 Packages [8943 kB] Get:9 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5170 kB] Get:10 http://ftpmaster.internal/ubuntu disco/multiverse amd64 Packages [159 kB] Get:11 http://ftpmaster.internal/ubuntu disco/multiverse Translation-en [113 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 Packages [119 kB] Get:13 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [51.9 kB] Get:14 http://ftpmaster.internal/ubuntu disco-proposed/restricted Translation-en [548 B] Get:15 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 Packages [343 kB] Get:16 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [186 kB] Get:17 http://ftpmaster.internal/ubuntu disco-proposed/multiverse amd64 Packages [18.7 kB] Get:18 http://ftpmaster.internal/ubuntu disco-proposed/multiverse Translation-en [12.3 kB] Fetched 17.1 MB in 6s (3106 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt binutils binutils-common binutils-x86-64-linux-gnu cpp-8 dash dpkg dpkg-dev e2fslibs e2fsprogs g++-8 gcc-8 gcc-8-base gpg gpg-agent gpgconf gpgv grep init init-system-helpers libapt-pkg5.0 libasan5 libassuan0 libatomic1 libbinutils libcc1-0 libcom-err2 libcomerr2 libdpkg-perl libext2fs2 libgcc-8-dev libgcc1 libgnutls30 libgomp1 libgpg-error0 libitm1 liblsan0 liblz4-1 libmpx2 libpng16-16 libquadmath0 libsemanage-common libsemanage1 libsqlite3-0 libss2 libstdc++-8-dev libstdc++6 libtsan0 libubsan1 libzstd1 linux-libc-dev sed tar tzdata 54 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 40.8 MB of archives. After this operation, 129 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main amd64 tar amd64 1.30+dfsg-4 [242 kB] Get:2 http://ftpmaster.internal/ubuntu disco/main amd64 dpkg amd64 1.19.2ubuntu2 [1101 kB] Get:3 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 dash amd64 0.5.10.2-4 [85.8 kB] Get:4 http://ftpmaster.internal/ubuntu disco/main amd64 grep amd64 3.3-1 [149 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 sed amd64 4.7-1 [190 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main amd64 init-system-helpers all 1.56+nmu1 [38.2 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main amd64 libgnutls30 amd64 3.6.5-2ubuntu1 [759 kB] Get:8 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libubsan1 amd64 8.2.0-14ubuntu1 [121 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libtsan0 amd64 8.2.0-14ubuntu1 [288 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gcc-8-base amd64 8.2.0-14ubuntu1 [18.6 kB] Get:11 http://ftpmaster.internal/ubuntu 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amd64 8.2.0-14ubuntu1 [39.4 kB] Get:21 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 g++-8 amd64 8.2.0-14ubuntu1 [8116 kB] Get:22 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gcc-8 amd64 8.2.0-14ubuntu1 [8008 kB] Get:23 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgcc-8-dev amd64 8.2.0-14ubuntu1 [2303 kB] Get:24 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libstdc++-8-dev amd64 8.2.0-14ubuntu1 [1539 kB] Get:25 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libstdc++6 amd64 8.2.0-14ubuntu1 [398 kB] Get:26 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libbinutils amd64 2.31.1-11ubuntu1 [484 kB] Get:27 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 binutils-common amd64 2.31.1-11ubuntu1 [194 kB] Get:28 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 binutils amd64 2.31.1-11ubuntu1 [3396 B] Get:29 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 binutils-x86-64-linux-gnu amd64 2.31.1-11ubuntu1 [1829 kB] Get:30 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 liblz4-1 amd64 1.8.3-1ubuntu1 [71.7 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main amd64 libzstd1 amd64 1.3.8+dfsg-3 [226 kB] Get:32 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libapt-pkg5.0 amd64 1.8.0~alpha3 [816 kB] Get:33 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgpg-error0 amd64 1.33-3 [57.4 kB] Get:34 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpgv amd64 2.2.12-1ubuntu1 [198 kB] Get:35 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 apt amd64 1.8.0~alpha3 [1165 kB] Get:36 http://ftpmaster.internal/ubuntu disco/main amd64 libext2fs2 amd64 1.44.5-1 [159 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main amd64 e2fsprogs amd64 1.44.5-1 [514 kB] Get:38 http://ftpmaster.internal/ubuntu disco/main amd64 init amd64 1.56+nmu1 [6080 B] Get:39 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage-common all 2.8-2 [7016 B] Get:40 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage1 amd64 2.8-2 [85.2 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main amd64 libcom-err2 amd64 1.44.5-1 [9372 B] Get:42 http://ftpmaster.internal/ubuntu disco/main amd64 libss2 amd64 1.44.5-1 [11.1 kB] Get:43 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsqlite3-0 amd64 3.26.0+fossilbc891ac6b-1 [530 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main amd64 tzdata all 2018i-1 [189 kB] Get:45 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpng16-16 amd64 1.6.36-2 [179 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main amd64 dpkg-dev all 1.19.2ubuntu2 [549 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main amd64 libdpkg-perl all 1.19.2ubuntu2 [227 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main amd64 e2fslibs amd64 1.44.5-1 [2704 B] Get:49 http://ftpmaster.internal/ubuntu disco/main amd64 libassuan0 amd64 2.5.2-1 [35.1 kB] Get:50 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpg amd64 2.2.12-1ubuntu1 [475 kB] Get:51 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpgconf amd64 2.2.12-1ubuntu1 [123 kB] Get:52 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpg-agent amd64 2.2.12-1ubuntu1 [229 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main amd64 libcomerr2 amd64 1.44.5-1 [2700 B] Get:54 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 linux-libc-dev amd64 4.19.0-9.10 [1041 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 40.8 MB in 1s (28.6 MB/s) (Reading database ... 12665 files and directories currently installed.) 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Setting up g++-8 (8.2.0-14ubuntu1) ... Setting up dpkg-dev (1.19.2ubuntu2) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-16252333 amd64 disco-proposed -c chroot:build-PACKAGEBUILD-16252333 --arch=amd64 --dist=disco-proposed --nolog -A mgltools-molkit_1.5.7-3.dsc Initiating build PACKAGEBUILD-16252333 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:40:15 UTC 2018 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-029.buildd +==============================================================================+ | mgltools-molkit 1.5.7-3 (amd64) 08 Jan 2019 23:18 | +==============================================================================+ Package: mgltools-molkit Version: 1.5.7-3 Source Version: 1.5.7-3 Distribution: disco-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/mgltools-molkit-ujffey/mgltools-molkit-1.5.7' with '<>' I: NOTICE: Log filtering will replace 'build/mgltools-molkit-ujffey' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-16252333/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- mgltools-molkit_1.5.7-3.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-Mjv7nT/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-Mjv7nT/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Mjv7nT/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-Mjv7nT/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Mjv7nT/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-Mjv7nT/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (51.0 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-Mjv7nT/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (70.5 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12669 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 11~), python-all, python-numpy, swig, dh-python Filtered Build-Depends: debhelper (>= 11~), python-all, python-numpy, swig, dh-python dpkg-deb: building package 'sbuild-build-depends-mgltools-molkit-dummy' in '/<>/resolver-bt6JC7/apt_archive/sbuild-build-depends-mgltools-molkit-dummy.deb'. Ign:1 copy:/<>/resolver-bt6JC7/apt_archive ./ InRelease Get:2 copy:/<>/resolver-bt6JC7/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-bt6JC7/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-bt6JC7/apt_archive ./ Sources [239 B] Get:5 copy:/<>/resolver-bt6JC7/apt_archive ./ Packages [560 B] Fetched 2918 B in 0s (74.6 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install mgltools-molkit build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbsd0 libcroco3 libelf1 libexpat1 libfile-stripnondeterminism-perl libgfortran5 libglib2.0-0 libicu63 liblapack3 libmagic-mgc libmagic1 libmpdec2 libpipeline1 libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libtool libuchardet0 libxml2 m4 man-db mime-support po-debconf python python-all python-minimal python-numpy python2 python2-minimal python2.7 python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal python3.7 python3.7-minimal swig swig3.0 Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python-doc python-tk gfortran python-dev python-nose python-numpy-dbg python-numpy-doc python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python3.7-venv python3.7-doc swig-doc swig-examples swig3.0-examples swig3.0-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libblas3 libbsd0 libcroco3 libelf1 libexpat1 libfile-stripnondeterminism-perl libgfortran5 libglib2.0-0 libicu63 liblapack3 libmagic-mgc libmagic1 libmpdec2 libpipeline1 libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libsigsegv2 libtool libuchardet0 libxml2 m4 man-db mime-support po-debconf python python-all python-minimal python-numpy python2 python2-minimal python2.7 python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal python3.7 python3.7-minimal sbuild-build-depends-mgltools-molkit-dummy swig swig3.0 0 upgraded, 62 newly installed, 0 to remove and 0 not upgraded. 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Setting up swig3.0 (3.0.12-1.2) ... Setting up mime-support (3.60ubuntu1) ... Setting up libicu63:amd64 (63.1-5) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libelf1:amd64 (0.175-2) ... Setting up libglib2.0-0:amd64 (2.58.1-2) ... No schema files found: doing nothing. Setting up gettext-base (0.19.8.1-9) ... Setting up libpipeline1:amd64 (1.5.0-2) ... Setting up m4 (1.4.18-2) ... Setting up libbsd0:amd64 (0.9.1-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7ubuntu3) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libmagic-mgc (1:5.34-2) ... Setting up libmagic1:amd64 (1:5.34-2) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up libblas3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up dwz (0.12-3) ... Setting up autotools-dev (20180224.1) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgfortran5:amd64 (8.2.0-14ubuntu1) ... Setting up libpython2.7-stdlib:amd64 (2.7.15-5) ... Setting up autopoint (0.19.8.1-9) ... Setting up libmpdec2:amd64 (2.4.2-2) ... Setting up libfile-stripnondeterminism-perl (1.0.0-1) ... Setting up swig (3.0.12-1.2) ... Setting up libpython3.7-stdlib:amd64 (3.7.2-1) ... Setting up gettext (0.19.8.1-9) ... Setting up groff-base (1.22.4-2) ... Setting up liblapack3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up python2.7 (2.7.15-5) ... Setting up python3.7 (3.7.2-1) ... Setting up autoconf (2.69-11) ... Setting up file (1:5.34-2) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.8.5-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libpython2-stdlib:amd64 (2.7.15-3) ... Setting up libtool (2.4.6-6) ... Setting up libpython3-stdlib:amd64 (3.7.1-1ubuntu1) ... Setting up po-debconf (1.0.21) ... Setting up python3 (3.7.1-1ubuntu1) ... Setting up python2 (2.7.15-3) ... Setting up libpython-stdlib:amd64 (2.7.15-3) ... Setting up python3-lib2to3 (3.7.2-2) ... Setting up python3-distutils (3.7.2-2) ... Setting up python (2.7.15-3) ... Setting up python-numpy (1:1.14.5-1ubuntu8) ... Setting up dh-python (3.20180927ubuntu2) ... Setting up python-all (2.7.15-3) ... Setting up dh-strip-nondeterminism (1.0.0-1) ... Setting up debhelper (12ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-mgltools-molkit-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-141-generic amd64 (x86_64) Toolchain package versions: binutils_2.31.1-11ubuntu1 dpkg-dev_1.19.2ubuntu2 g++-8_8.2.0-14ubuntu1 gcc-8_8.2.0-14ubuntu1 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-14ubuntu1 libstdc++6_8.2.0-14ubuntu1 linux-libc-dev_4.19.0-9.10 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 apt_1.8.0~alpha3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.45 bash_4.4.18-2ubuntu3 binutils_2.31.1-11ubuntu1 binutils-common_2.31.1-11ubuntu1 binutils-x86-64-linux-gnu_2.31.1-11ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.32-0.1ubuntu2 build-essential_12.5ubuntu2 bzip2_1.0.6-9 ca-certificates_20180409 coreutils_8.28-1ubuntu2 cpp_4:8.2.0-2ubuntu2 cpp-8_8.2.0-14ubuntu1 dash_0.5.10.2-4 debconf_1.5.69 debhelper_12ubuntu1 debianutils_4.8.6 dh-autoreconf_19 dh-python_3.20180927ubuntu2 dh-strip-nondeterminism_1.0.0-1 diffutils_1:3.6-1 dmsetup_2:1.02.145-4.1ubuntu4 dpkg_1.19.2ubuntu2 dpkg-dev_1.19.2ubuntu2 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.32-0.1ubuntu2 file_1:5.34-2 findutils_4.6.0+git+20181018-1 g++_4:8.2.0-2ubuntu2 g++-8_8.2.0-14ubuntu1 gcc_4:8.2.0-2ubuntu2 gcc-8_8.2.0-14ubuntu1 gcc-8-base_8.2.0-14ubuntu1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpg_2.2.12-1ubuntu1 gpg-agent_2.2.12-1ubuntu1 gpgconf_2.2.12-1ubuntu1 gpgv_2.2.12-1ubuntu1 grep_3.3-1 groff-base_1.22.4-2 gzip_1.6-5ubuntu2 hostname_3.21 init_1.56+nmu1 init-system-helpers_1.56+nmu1 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libapparmor1_2.12-4ubuntu10 libapt-pkg5.0_1.8.0~alpha3 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan5_8.2.0-14ubuntu1 libassuan0_2.5.2-1 libatomic1_8.2.0-14ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.8.3-1ubuntu3 libaudit1_1:2.8.3-1ubuntu3 libbinutils_2.31.1-11ubuntu1 libblas3_3.8.0-2 libblkid1_2.32-0.1ubuntu2 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-0ubuntu1 libc-dev-bin_2.28-0ubuntu1 libc6_2.28-0ubuntu1 libc6-dev_2.28-0ubuntu1 libcap-ng0_0.7.9-1build1 libcap2_1:2.25-1.2 libcc1-0_8.2.0-14ubuntu1 libcom-err2_1.44.5-1 libcomerr2_1.44.5-1 libcroco3_0.6.12-3 libcryptsetup12_2:2.0.4-2ubuntu2 libdb5.3_5.3.28+dfsg1-0.2 libdebconfclient0_0.244ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu4 libdpkg-perl_1.19.2ubuntu2 libelf1_0.175-2 libexpat1_2.2.6-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.32-0.1ubuntu2 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.0.0-1 libgcc-8-dev_8.2.0-14ubuntu1 libgcc1_1:8.2.0-14ubuntu1 libgcrypt20_1.8.4-3ubuntu1 libgdbm-compat4_1.18.1-2 libgdbm6_1.18.1-2 libgfortran5_8.2.0-14ubuntu1 libglib2.0-0_2.58.1-2 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2ubuntu1 libgomp1_8.2.0-14ubuntu1 libgpg-error0_1.33-3 libhogweed4_3.4.1~rc1-1 libicu63_63.1-5 libidn11_1.33-2.2ubuntu1 libidn2-0_2.0.5-1 libip4tc0_1.6.1-2ubuntu3 libisl19_0.20-2 libitm1_8.2.0-14ubuntu1 libjson-c3_0.12.1-1.3 libkmod2_25-1ubuntu2 liblapack3_3.8.0-2 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 liblsan0_8.2.0-14ubuntu1 liblz4-1_1.8.3-1ubuntu1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmount1_2.32-0.1ubuntu2 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.1-2 libmpx2_8.2.0-14ubuntu1 libncurses6_6.1+20180210-4ubuntu1 libncursesw6_6.1+20180210-4ubuntu1 libnettle6_3.4.1~rc1-1 libnpth0_1.6-1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.6ubuntu2 libpam-modules-bin_1.1.8-3.6ubuntu2 libpam-runtime_1.1.8-3.6ubuntu2 libpam0g_1.1.8-3.6ubuntu2 libpcre3_2:8.39-11 libperl5.28_5.28.1-3 libpipeline1_1.5.0-2 libpng16-16_1.6.36-2 libprocps7_2:3.3.15-2ubuntu1 libpython-stdlib_2.7.15-3 libpython2-stdlib_2.7.15-3 libpython2.7-minimal_2.7.15-5 libpython2.7-stdlib_2.7.15-5 libpython3-stdlib_3.7.1-1ubuntu1 libpython3.7-minimal_3.7.2-1 libpython3.7-stdlib_3.7.2-1 libquadmath0_8.2.0-14ubuntu1 libreadline7_7.0-5 libseccomp2_2.3.3-3ubuntu2 libselinux1_2.8-1build2 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libslang2_2.3.2-1ubuntu1 libsmartcols1_2.32-0.1ubuntu2 libsqlite3-0_3.26.0+fossilbc891ac6b-1 libss2_1.44.5-1 libssl1.1_1.1.1a-1ubuntu2 libstdc++-8-dev_8.2.0-14ubuntu1 libstdc++6_8.2.0-14ubuntu1 libsystemd0_239-7ubuntu15 libtasn1-6_4.13-3 libtinfo6_6.1+20180210-4ubuntu1 libtool_2.4.6-6 libtsan0_8.2.0-14ubuntu1 libubsan1_8.2.0-14ubuntu1 libuchardet0_0.0.6-3 libudev1_239-7ubuntu15 libunistring2_0.9.10-1ubuntu1 libusb-0.1-4_2:0.1.12-32 libuuid1_2.32-0.1ubuntu2 libxml2_2.9.4+dfsg1-7ubuntu3 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.0-9.10 lockfile-progs_0.1.18 login_1:4.5-1ubuntu1 lsb-base_9.20170808ubuntu1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-1 mawk_1.3.3-17ubuntu3 mime-support_3.60ubuntu1 mount_2.32-0.1ubuntu2 multiarch-support_2.28-0ubuntu1 ncurses-base_6.1+20180210-4ubuntu1 ncurses-bin_6.1+20180210-4ubuntu1 openssl_1.1.1a-1ubuntu2 optipng_0.7.6-1.1 passwd_1:4.5-1ubuntu1 patch_2.7.6-3 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.28_5.28.1-3 pinentry-curses_1.1.0-1build2 pkgbinarymangler_143 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu1 python_2.7.15-3 python-all_2.7.15-3 python-minimal_2.7.15-3 python-numpy_1:1.14.5-1ubuntu8 python2_2.7.15-3 python2-minimal_2.7.15-3 python2.7_2.7.15-5 python2.7-minimal_2.7.15-5 python3_3.7.1-1ubuntu1 python3-distutils_3.7.2-2 python3-lib2to3_3.7.2-2 python3-minimal_3.7.1-1ubuntu1 python3.7_3.7.2-1 python3.7-minimal_3.7.2-1 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-mgltools-molkit-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 swig_3.0.12-1.2 swig3.0_3.0.12-1.2 systemd_239-7ubuntu15 systemd-sysv_239-7ubuntu15 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 tar_1.30+dfsg-4 tzdata_2018i-1 ubuntu-keyring_2018.09.18.1 util-linux_2.32-0.1ubuntu2 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Jan 8 16:17:15 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./mgltools-molkit_1.5.7-3.dsc dpkg-source: info: extracting mgltools-molkit in mgltools-molkit-1.5.7 dpkg-source: info: unpacking mgltools-molkit_1.5.7.orig.tar.xz dpkg-source: info: unpacking mgltools-molkit_1.5.7-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_string_exceptions.patch dpkg-source: info: applying fix_import_star.patch dpkg-source: info: applying privacy_breach.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-16252333 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-16252333 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-16252333 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package mgltools-molkit dpkg-buildpackage: info: source version 1.5.7-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with python2 dh_auto_clean dh_auto_clean: Please use the third-party "pybuild" build system instead of python-distutils dh_auto_clean: This feature will be removed in compat 12. pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions python setup.py clean -a running clean 'build/lib.linux-x86_64-2.7' does not exist -- can't clean it 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it find . -name \*.pyc -exec rm {} \+ debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean find . -name CVS -a -type d| xargs -r rm -r rm -rf build build-stamp find . -name .cvsignore | xargs -r rm make[1]: Leaving directory '/<>' ## No need for this, outdated files are not used in build process ## --with autotools-dev debian/rules build dh build --with python2 dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_configure: Please use the third-party "pybuild" build system instead of python-distutils dh_auto_configure: This feature will be removed in compat 12. dh_auto_build dh_auto_build: Please use the third-party "pybuild" build system instead of python-distutils dh_auto_build: This feature will be removed in compat 12. pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions python setup.py build --force running build running build_py creating build creating build/lib.linux-x86_64-2.7 creating build/lib.linux-x86_64-2.7/MolKit copying MolKit/genPdbParser.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/getsecondarystructure.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/moleculeWriter.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/PDBdict.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/pqrWriter.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/sdfParser.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/WaterBuilder.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/oxtBuilder.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/moleculeParser.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/radii_patterns.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/protein.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/groParser.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/pdbWriter.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/interactionDescriptor.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/tree.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/GapFinder.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/rotamerLib.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/bondSelector.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/sets.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/amberPrmTop.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/introduction.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/stringSelector.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/APBSParameters.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/distanceSelector.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/PROSS.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/listSet.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/mol2Parser.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/mmcifParser.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/hydrogenBuilder.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/mmcifWriter.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/MolecularDescriptor.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/parm94_dat.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/chargeMass.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/pdbParser.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/chargeCalculator.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/PDBresidueNames.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/sequence.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/hydrogenBondBuilder.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/waterBuilder.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/trajParser.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/torTree.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/molecule.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/bondClassifier.py -> build/lib.linux-x86_64-2.7/MolKit copying MolKit/__init__.py -> build/lib.linux-x86_64-2.7/MolKit creating build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/unict_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/allnt_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/qkollua.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/uni_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/all_amino94_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/opls_nacl_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/nh2e_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/unint_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/build_all_in.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/all_aminoct94_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/all_aminont94_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/all_nuc94_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/opls_unict_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/allct_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/opls_unint_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/all_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/opls_uni_dat.py -> build/lib.linux-x86_64-2.7/MolKit/data copying MolKit/data/__init__.py -> build/lib.linux-x86_64-2.7/MolKit/data creating build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_dependencies.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_chargeCalculator.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_bondClassifier.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_hydrogenBuilder.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_distanceSelector.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_buildBondsByDistance.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_mmcifParser.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_molecule.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_tree.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_oxtBuilder.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_pdbParser.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_mmcifWriter.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_protein.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_selection.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_listSet.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_pdbWriter.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_stringRepr.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_bondSelector.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_Sets.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_stringSelector.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_getsecondarystructure.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_hydrogenBondBuilder.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/__init__.py -> build/lib.linux-x86_64-2.7/MolKit/Tests copying MolKit/Tests/test_setSelectors.py -> build/lib.linux-x86_64-2.7/MolKit/Tests creating build/lib.linux-x86_64-2.7/MolKit/VisionInterface copying MolKit/VisionInterface/MolKitTypes.py -> build/lib.linux-x86_64-2.7/MolKit/VisionInterface copying MolKit/VisionInterface/MolKitNodes.py -> build/lib.linux-x86_64-2.7/MolKit/VisionInterface copying MolKit/VisionInterface/__init__.py -> build/lib.linux-x86_64-2.7/MolKit/VisionInterface creating build/lib.linux-x86_64-2.7/MolKit/VisionInterface/Tests copying MolKit/VisionInterface/Tests/test_molkitnodes.py -> build/lib.linux-x86_64-2.7/MolKit/VisionInterface/Tests copying MolKit/VisionInterface/Tests/cpk_net.py -> build/lib.linux-x86_64-2.7/MolKit/VisionInterface/Tests copying MolKit/VisionInterface/Tests/test_molkitlib.py -> build/lib.linux-x86_64-2.7/MolKit/VisionInterface/Tests copying MolKit/VisionInterface/Tests/__init__.py -> build/lib.linux-x86_64-2.7/MolKit/VisionInterface/Tests package init file 'MolKit/VisionInterface/Tests/Data/__init__.py' not found (or not a regular file) creating build/lib.linux-x86_64-2.7/MolKit/VisionInterface/Tests/Data copying MolKit/VisionInterface/Tests/Data/cpk_net.py -> build/lib.linux-x86_64-2.7/MolKit/VisionInterface/Tests/Data creating build/lib.linux-x86_64-2.7/MolKit/pdb2pqr copying MolKit/pdb2pqr/routines.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr copying MolKit/pdb2pqr/utilities.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr copying MolKit/pdb2pqr/protein.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr copying MolKit/pdb2pqr/quatfit.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr copying MolKit/pdb2pqr/definitions.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr copying MolKit/pdb2pqr/forcefield.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr copying MolKit/pdb2pqr/hydrogens.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr copying MolKit/pdb2pqr/pdb2pqr.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr copying MolKit/pdb2pqr/structures.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr copying MolKit/pdb2pqr/pdb.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr copying MolKit/pdb2pqr/__init__.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr creating build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/psize.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/server.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/routines.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/utilities.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/protein.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/quatfit.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/definitions.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/forcefield.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/hydrogens.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/aa.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/inputgen.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/structures.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/pdb.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/na.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src copying MolKit/pdb2pqr/src/__init__.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src creating build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions copying MolKit/pdb2pqr/extensions/chi.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions copying MolKit/pdb2pqr/extensions/rama.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions copying MolKit/pdb2pqr/extensions/psi.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions copying MolKit/pdb2pqr/extensions/phi.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions copying MolKit/pdb2pqr/extensions/hbond.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions copying MolKit/pdb2pqr/extensions/__init__.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions creating build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/NEWligand_topology.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/inputgen_pKa.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/apbs.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/pMC_mult.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/example.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/pKa_base.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/pka.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/ligand_topology.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/__init__.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka creating build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/propkalib.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/__init__.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/propka creating build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean copying MolKit/pdb2pqr/pdb2pka/ligandclean/lookuptable.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean copying MolKit/pdb2pqr/pdb2pka/ligandclean/templates.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean copying MolKit/pdb2pqr/pdb2pka/ligandclean/trial_templates.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean copying MolKit/pdb2pqr/pdb2pka/ligandclean/peoe_PDB2PQR.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean copying MolKit/pdb2pqr/pdb2pka/ligandclean/ligff.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean copying MolKit/pdb2pqr/pdb2pka/ligandclean/__init__.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean creating build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/substruct copying MolKit/pdb2pqr/pdb2pka/substruct/__init__.py -> build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/substruct package init file 'MolKit/VisionInterface/Tests/Data/__init__.py' not found (or not a regular file) dh_auto_test dh_auto_test: Please use the third-party "pybuild" build system instead of python-distutils dh_auto_test: This feature will be removed in compat 12. create-stamp debian/debhelper-build-stamp ## No need for this, outdated files are not used in build process ## --with autotools-dev fakeroot debian/rules binary dh binary --with python2 dh_testroot dh_prep dh_auto_install dh_auto_install: Please use the third-party "pybuild" build system instead of python-distutils dh_auto_install: This feature will be removed in compat 12. pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions python setup.py install --force --root=/<>/debian/mgltools-molkit --no-compile -O0 --install-layout=deb running install running build running build_py package init file 'MolKit/VisionInterface/Tests/Data/__init__.py' not found (or not a regular file) package init file 'MolKit/VisionInterface/Tests/Data/__init__.py' not found (or not a regular file) running install_lib creating /<>/debian/mgltools-molkit/usr creating /<>/debian/mgltools-molkit/usr/lib creating /<>/debian/mgltools-molkit/usr/lib/python2.7 creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/genPdbParser.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/getsecondarystructure.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/moleculeWriter.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/PDBdict.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/pqrWriter.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/sdfParser.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/WaterBuilder.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_dependencies.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_chargeCalculator.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_bondClassifier.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_hydrogenBuilder.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_distanceSelector.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_buildBondsByDistance.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_mmcifParser.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_molecule.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_tree.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_oxtBuilder.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_pdbParser.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_mmcifWriter.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_protein.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_selection.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_listSet.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_pdbWriter.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_stringRepr.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_bondSelector.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_Sets.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_stringSelector.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_getsecondarystructure.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_hydrogenBondBuilder.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/__init__.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/Tests/test_setSelectors.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests copying build/lib.linux-x86_64-2.7/MolKit/oxtBuilder.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/moleculeParser.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/radii_patterns.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/protein.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/groParser.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/pdbWriter.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/interactionDescriptor.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/tree.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/GapFinder.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/rotamerLib.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/bondSelector.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/sets.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/amberPrmTop.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/introduction.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface/Tests copying build/lib.linux-x86_64-2.7/MolKit/VisionInterface/Tests/test_molkitnodes.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface/Tests copying build/lib.linux-x86_64-2.7/MolKit/VisionInterface/Tests/cpk_net.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface/Tests creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface/Tests/Data copying build/lib.linux-x86_64-2.7/MolKit/VisionInterface/Tests/Data/cpk_net.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface/Tests/Data copying build/lib.linux-x86_64-2.7/MolKit/VisionInterface/Tests/test_molkitlib.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface/Tests copying build/lib.linux-x86_64-2.7/MolKit/VisionInterface/Tests/__init__.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface/Tests copying build/lib.linux-x86_64-2.7/MolKit/VisionInterface/MolKitTypes.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface copying build/lib.linux-x86_64-2.7/MolKit/VisionInterface/MolKitNodes.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface copying build/lib.linux-x86_64-2.7/MolKit/VisionInterface/__init__.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface copying build/lib.linux-x86_64-2.7/MolKit/stringSelector.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/unict_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/allnt_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/qkollua.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/uni_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/all_amino94_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/opls_nacl_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/nh2e_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/unint_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/build_all_in.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/all_aminoct94_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/all_aminont94_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/all_nuc94_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/opls_unict_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/allct_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/opls_unint_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/all_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/opls_uni_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/data/__init__.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying build/lib.linux-x86_64-2.7/MolKit/APBSParameters.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/distanceSelector.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/PROSS.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/listSet.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/mol2Parser.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/mmcifParser.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/hydrogenBuilder.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/mmcifWriter.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/MolecularDescriptor.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/parm94_dat.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/chargeMass.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/pdbParser.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/routines.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/utilities.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/protein.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/extensions copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions/chi.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/extensions copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions/rama.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/extensions copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions/psi.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/extensions copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions/phi.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/extensions copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions/hbond.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/extensions copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/extensions/__init__.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/extensions copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/quatfit.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/definitions.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/forcefield.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/psize.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/server.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/routines.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/utilities.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/protein.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/quatfit.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/definitions.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/forcefield.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/hydrogens.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/aa.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/inputgen.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/structures.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/pdb.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/na.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/src/__init__.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/src copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/hydrogens.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pqr.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean/lookuptable.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean/templates.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean/trial_templates.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean/peoe_PDB2PQR.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean/ligff.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligandclean/__init__.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/NEWligand_topology.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/substruct copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/substruct/__init__.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/substruct copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/inputgen_pKa.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/apbs.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/pMC_mult.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/example.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/pKa_base.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/pka.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/ligand_topology.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb2pka/__init__.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/structures.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/propka/propkalib.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/propka/__init__.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/pdb.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying build/lib.linux-x86_64-2.7/MolKit/pdb2pqr/__init__.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying build/lib.linux-x86_64-2.7/MolKit/chargeCalculator.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/PDBresidueNames.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/sequence.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/hydrogenBondBuilder.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/waterBuilder.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/trajParser.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/torTree.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/molecule.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/bondClassifier.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying build/lib.linux-x86_64-2.7/MolKit/__init__.py -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit running install_data copying MolKit/RELNOTES -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit copying MolKit/LICENSE -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1GGA_.cif -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/indinavir.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1crn2ChainsNOTER.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/2plv.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/mead.pqr -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1bsr.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1CRN.cif -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/fx.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/fxnohtatm.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1crn2Chains.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/ind_crystal.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1GOT_r.pdbq -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/HTet.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/2plv_no_oxt.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/protease.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1crn.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1ent.pdbqs -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/smfx_goodHYDBND.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1ACB.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/hpi1s.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/hsg1.pdbqt -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/fakePDB.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/2EZNsmall.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/2PLV.cif -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1a30.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/stringSel.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/ind.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1crn.pdbqs -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1ent_rec.pdbqt -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1crn_2.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1crn_Hs.pdbq -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1gyc.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/hsg1.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/bdna_HS.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/1CRN_.cif -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/Tests/Data/smfx_badHYDBND.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/Tests/Data copying MolKit/VisionInterface/Tests/cv.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface/Tests copying MolKit/VisionInterface/Tests/1crn.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface/Tests creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface/regression copying MolKit/VisionInterface/regression/cv.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/VisionInterface/regression copying MolKit/data/nh2e.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/all_aminont94.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/parm94.dat -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/all.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/rotamer.def -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/opls_uni.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/opls_unict.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/allct.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/opls_unint.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/all_aminoct94.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/opls_nacl.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/allnt.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/all_amino94.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/data/all_nuc94.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/data copying MolKit/pdb2pqr/README -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/NA.DAT -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/AA.DAT -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/ChangeLog -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/AUTHORS -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/NEWS -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/configure -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/Makefile.am -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/acinclude.m4 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/HYDROGENS.DAT -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/CHARMM.DAT -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/COPYING -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/Makefile.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/INSTALL -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/aclocal.m4 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/configure.ac -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/PARSE.DAT -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr copying MolKit/pdb2pqr/AMBER.DAT -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/license.txt -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/psize.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/programmerguide.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/forcefield.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/genpydoc.sh -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/routines.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/userguide.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/quatfit.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/protein.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/structures.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/inputgen.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/server.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/utilities.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/definitions.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/pdb2pqr.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/pdb.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc copying MolKit/pdb2pqr/doc/hydrogens.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/copy.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.hydrogens.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/getopt.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/.htaccess -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.routines.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.structures.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.aa.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.server.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/string.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/math.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.utilities.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/time.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/xml.sax.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/re.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.inputgen.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.protein.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.psize.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/os.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.forcefield.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/index.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.pdb.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/pdb2pqr.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.na.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.definitions.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/sys.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc copying MolKit/pdb2pqr/doc/pydoc/src.quatfit.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/pydoc creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/images copying MolKit/pdb2pqr/doc/images/flowchart.png -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/doc/images creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/dat/PARSE.names -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/dat/CHARMM.names -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/dat/NA.xml -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/dat/AA.xml -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/dat/CHARMM.DAT -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/dat/TYL06.DAT -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/dat/TYL06.names -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/dat/HYDROGENS.xml -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/dat/AMBER.names -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/dat/PARSE.DAT -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/dat/PATCHES.xml -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/dat/AMBER.DAT -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/dat copying MolKit/pdb2pqr/extensions/README -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/extensions copying MolKit/pdb2pqr/extensions/template -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/extensions creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/examples copying MolKit/pdb2pqr/examples/index.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/examples creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/examples/ligands copying MolKit/pdb2pqr/examples/ligands/README -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/examples/ligands copying MolKit/pdb2pqr/examples/ligands/LIG_1QBS.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/examples/ligands copying MolKit/pdb2pqr/examples/ligands/LIG_1ABF.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/examples/ligands copying MolKit/pdb2pqr/examples/ligands/LIG_1XL5.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/examples/ligands copying MolKit/pdb2pqr/examples/ligands/LIG_1HPX.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/examples/ligands copying MolKit/pdb2pqr/examples/ligands/LIG_1HPV.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/examples/ligands creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/examples/1a1p copying MolKit/pdb2pqr/examples/1a1p/README -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/examples/1a1p copying MolKit/pdb2pqr/examples/1a1p/1a1p.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/examples/1a1p creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/html copying MolKit/pdb2pqr/html/README -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/html copying MolKit/pdb2pqr/html/index.php -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/html copying MolKit/pdb2pqr/html/master-index.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/html copying MolKit/pdb2pqr/html/server.html -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/html copying MolKit/pdb2pqr/pdb2pka/Makefile.am -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/pMC_mult.h -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/pMC_mult.i -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/pMC_mult.cpp -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/TITRATION.DAT -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/Makefile.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka copying MolKit/pdb2pqr/pdb2pka/pMC_mult_wrap.cpp -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/1qbs_test.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/1qbs_lig_clean.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/1us0_clean.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/1us0_ASP43.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/ac2.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/1qbs_clean.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/LIG1B.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/lig1b_h.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/carvedilol.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/acetacid3.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/1us0_lig_clean.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/1k1i.pdb -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes/IDD594.mol2 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/ligandclean/testcomplexes copying MolKit/pdb2pqr/pdb2pka/substruct/Makefile.am -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/substruct copying MolKit/pdb2pqr/pdb2pka/substruct/Algorithms.cpp -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/substruct copying MolKit/pdb2pqr/pdb2pka/substruct/Makefile.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/substruct creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/substruct/clique copying MolKit/pdb2pqr/pdb2pka/substruct/clique/README -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/substruct/clique copying MolKit/pdb2pqr/pdb2pka/substruct/clique/util.h -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/substruct/clique copying MolKit/pdb2pqr/pdb2pka/substruct/clique/clique.h -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/substruct/clique copying MolKit/pdb2pqr/pdb2pka/substruct/clique/bk.h -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/substruct/clique copying MolKit/pdb2pqr/pdb2pka/substruct/clique/set.h -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/substruct/clique copying MolKit/pdb2pqr/pdb2pka/substruct/clique/COPYING -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/pdb2pka/substruct/clique copying MolKit/pdb2pqr/propka/README -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/ChangeLog -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/AUTHORS -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/NEWS -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/configure -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/Makefile.am -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/LICENSE -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/propkac.c -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/acinclude.m4 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/COPYING -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/propkalib.i -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/propkalib.c -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/propka.f -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/Makefile.in -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/INSTALL -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/aclocal.m4 -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka copying MolKit/pdb2pqr/propka/configure.ac -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka/config copying MolKit/pdb2pqr/propka/config/config.guess -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka/config copying MolKit/pdb2pqr/propka/config/ltmain.sh -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka/config copying MolKit/pdb2pqr/propka/config/config.sub -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka/config copying MolKit/pdb2pqr/propka/config/bootstrap -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka/config copying MolKit/pdb2pqr/propka/config/bootstrap_verbose -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka/config copying MolKit/pdb2pqr/propka/config/install-sh -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka/config copying MolKit/pdb2pqr/propka/config/mkinstalldirs -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka/config copying MolKit/pdb2pqr/propka/config/bootstrapapp -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka/config copying MolKit/pdb2pqr/propka/config/compile -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka/config copying MolKit/pdb2pqr/propka/config/ltconfig -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka/config copying MolKit/pdb2pqr/propka/config/missing -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/propka/config creating /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/config copying MolKit/pdb2pqr/config/config.guess -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/config copying MolKit/pdb2pqr/config/ltmain.sh -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/config copying MolKit/pdb2pqr/config/config.sub -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/config copying MolKit/pdb2pqr/config/bootstrap -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/config copying MolKit/pdb2pqr/config/bootstrap_verbose -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/config copying MolKit/pdb2pqr/config/install-sh -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/config copying MolKit/pdb2pqr/config/mkinstalldirs -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/config copying MolKit/pdb2pqr/config/bootstrapapp -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/config copying MolKit/pdb2pqr/config/compile -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/config copying MolKit/pdb2pqr/config/ltconfig -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/config copying MolKit/pdb2pqr/config/missing -> /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit/pdb2pqr/config running install_egg_info Writing /<>/debian/mgltools-molkit/usr/lib/python2.7/dist-packages/MolKit-1.5.6.egg-info debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install # this file is not needed and gives a lintian warning, so go away find debian -name inputgen_pKa.py -a -type f| xargs -r rm -r make[1]: Leaving directory '/<>' dh_installdocs dh_installchangelogs dh_python2 dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package mgltools-molkit: substitution variable ${python:Versions} unused, but is defined dh_md5sums dh_builddeb INFO: pkgstriptranslations version 143 pkgstriptranslations: processing mgltools-molkit (in debian/mgltools-molkit); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/mgltools-molkit/DEBIAN/control, package mgltools-molkit, directory debian/mgltools-molkit pkgstripfiles: Truncating usr/share/doc/mgltools-molkit/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package mgltools-molkit ... o pkgstripfiles: PNG optimization (1/0) for package mgltools-molkit took 39 s dpkg-deb: building package 'mgltools-molkit' in '../mgltools-molkit_1.5.7-3_all.deb'. ## No need for this, outdated files are not used in build process ## --with autotools-dev dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../mgltools-molkit_1.5.7-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20190108-2319 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ mgltools-molkit_1.5.7-3_amd64.changes: -------------------------------------- Format: 1.8 Date: Tue, 08 Jan 2019 17:09:59 +0100 Source: mgltools-molkit Binary: mgltools-molkit Architecture: all Version: 1.5.7-3 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: mgltools-molkit - Python classes to read and manipulate molecules Changes: mgltools-molkit (1.5.7-3) unstable; urgency=medium . * Team upload. * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.3.0 * Remove trailing whitespace in debian/changelog * Remove trailing whitespace in debian/control * Remove trailing whitespace in debian/copyright Checksums-Sha1: 71b9fa06b3ff7277c6855c92fabd0d12ce0ef4a8 1543228 mgltools-molkit_1.5.7-3_all.deb eef734965419131a2ce5242b07a9a795da63e705 5689 mgltools-molkit_1.5.7-3_amd64.buildinfo Checksums-Sha256: 204635c9131897932a022e2ee15b86da1b397c337ba09cb3e0bbf8a69c536de6 1543228 mgltools-molkit_1.5.7-3_all.deb 1687f25d0b0273aafda57a67d062cc8129c186738aedf9220ab5ee791339b5aa 5689 mgltools-molkit_1.5.7-3_amd64.buildinfo Files: d87a01d33d44d977165778a2270a63e9 1543228 non-free/science optional mgltools-molkit_1.5.7-3_all.deb 0f43869f2c126a4bf5a9b6aa123ec3a7 5689 non-free/science optional mgltools-molkit_1.5.7-3_amd64.buildinfo +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ mgltools-molkit_1.5.7-3_all.deb ------------------------------- new debian package, version 2.0. size 1543228 bytes: control archive=9660 bytes. 873 bytes, 19 lines control 35586 bytes, 361 lines md5sums 165 bytes, 9 lines * postinst #!/bin/sh 269 bytes, 14 lines * prerm #!/bin/sh Package: mgltools-molkit Version: 1.5.7-3 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 14419 Depends: python:any (<< 2.8), python:any (>= 2.7~), mgltools-pybabel, mgltools-dejavu, mgltools-bhtree, mgltools-sff, python-numpy Recommends: mgltools-cmolkit Suggests: pdb2pqr Section: non-free/science Priority: optional Homepage: http://mgltools.scripps.edu/ Description: Python classes to read and manipulate molecules This package is part of the mgltools set of Python libraries which provide an infrastructure for the analysis of protein structures and their docking of chemical compounds. . 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./usr/share/lintian/overrides/ -rw-r--r-- root/root 117 2019-01-08 16:09 ./usr/share/lintian/overrides/mgltools-molkit +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 35916 Build-Time: 63 Distribution: disco-proposed Host Architecture: amd64 Install-Time: 43 Job: mgltools-molkit_1.5.7-3.dsc Machine Architecture: amd64 Package: mgltools-molkit Package-Time: 109 Source-Version: 1.5.7-3 Space: 35916 Status: successful Version: 1.5.7-3 -------------------------------------------------------------------------------- Finished at 20190108-2319 Build needed 00:01:49, 35916k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16252333 Scanning for processes to kill in build PACKAGEBUILD-16252333