RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '834395-1938933', '/home/buildd/filecache-default/1cf0727c4591110fbb1f155bc869fbb721e43ba9'] Synching the system clock with the buildd NTP service... 12 Jan 15:03:39 ntpdate[15057]: adjust time server 10.122.37.1 offset 0.000104 sec Unpacking chroot for build 834395-1938933 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '834395-1938933'] Mounting chroot for build 834395-1938933 RUN: /usr/share/launchpad-buildd/slavebin/apply-ogre-model ['apply-ogre-model', '834395-1938933', 'universe'] Attempting OGRE for universe in build-834395-1938933 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '834395-1938933', 'deb http://ftpmaster.internal/ubuntu jaunty main universe'] Overriding sources.list in build-834395-1938933 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '834395-1938933'] Updating debian chroot for build 834395-1938933 Get:1 http://ftpmaster.internal jaunty Release.gpg [189B] Get:2 http://ftpmaster.internal jaunty Release [74.6kB] Get:3 http://ftpmaster.internal jaunty/main Packages [1277kB] Get:4 http://ftpmaster.internal jaunty/universe Packages [4653kB] Fetched 6006kB in 13s (439kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: libvolume-id1 The following packages will be upgraded: base-files bash-completion binutils bsdutils cpp-4.3 debconf debconf-english dmsetup dpkg dpkg-dev e2fslibs e2fsprogs fakeroot g++-4.3 gcc-4.3 gcc-4.3-base libblkid1 libc6.1 libc6.1-dev libcomerr2 libdb4.7 libdevmapper1.02.1 libgcc1 libgomp1 libncurses5 libpam-foreground libpam-modules libpam-runtime libpam0g libss2 libstdc++6 libstdc++6-4.3-dev libuuid1 mount ncurses-base ncurses-bin perl perl-base perl-doc perl-modules pkgbinarymangler python2.5-minimal util-linux 43 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0B/51.8MB of archives. After this operation, 254kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libpam-modules base-files dpkg e2fsprogs libc6.1-dev libgomp1 cpp-4.3 gcc-4.3-base libgcc1 gcc-4.3 g++-4.3 libstdc++6-4.3-dev libstdc++6 binutils libc6.1 libvolume-id1 mount ncurses-bin perl-modules perl perl-base util-linux bsdutils libncurses5 ncurses-base debconf-english debconf libcomerr2 e2fslibs libuuid1 libblkid1 libdb4.7 libpam-runtime libpam0g libss2 python2.5-minimal libdevmapper1.02.1 dmsetup bash-completion dpkg-dev fakeroot libpam-foreground perl-doc pkgbinarymangler Extracting templates from packages: 68% Extracting templates from packages: 100% Preconfiguring packages ... Authentication warning overridden. (Reading database ... 10596 files and directories currently installed.) Preparing to replace libpam-modules 1.0.1-4ubuntu5.4 (using .../libpam-modules_1.0.1-5ubuntu1_ia64.deb) ... Unpacking replacement libpam-modules ... Setting up libpam-modules (1.0.1-5ubuntu1) ... Installing new version of config file /etc/security/limits.conf ... (Reading database ... 10596 files and directories currently installed.) Preparing to replace base-files 4.0.6ubuntu1 (using .../base-files_5ubuntu1_ia64.deb) ... Unpacking replacement base-files ... Setting up base-files (5ubuntu1) ... Installing new version of config file /etc/debian_version ... (Reading database ... 10596 files and directories currently installed.) Preparing to replace dpkg 1.14.22ubuntu1 (using .../dpkg_1.14.24ubuntu1_ia64.deb) ... Unpacking replacement dpkg ... Setting up dpkg (1.14.24ubuntu1) ... (Reading database ... 10596 files and directories currently installed.) Preparing to replace e2fsprogs 1.41.3-1ubuntu1 (using .../e2fsprogs_1.41.3-1ubuntu2_ia64.deb) ... Unpacking replacement e2fsprogs ... Setting up e2fsprogs (1.41.3-1ubuntu2) ... (Reading database ... 10596 files and directories currently installed.) Preparing to replace libc6.1-dev 2.9-0ubuntu5 (using .../libc6.1-dev_2.9-0ubuntu7_ia64.deb) ... Unpacking replacement libc6.1-dev ... Preparing to replace libgomp1 4.3.2-2ubuntu8 (using .../libgomp1_4.3.2-2ubuntu11_ia64.deb) ... Unpacking replacement libgomp1 ... Preparing to replace cpp-4.3 4.3.2-2ubuntu8 (using .../cpp-4.3_4.3.2-2ubuntu11_ia64.deb) ... Unpacking replacement cpp-4.3 ... Preparing to replace gcc-4.3-base 4.3.2-2ubuntu8 (using .../gcc-4.3-base_4.3.2-2ubuntu11_ia64.deb) ... Unpacking replacement gcc-4.3-base ... Setting up gcc-4.3-base (4.3.2-2ubuntu11) ... (Reading database ... 10596 files and directories currently installed.) Preparing to replace libgcc1 1:4.3.2-2ubuntu8 (using .../libgcc1_1%3a4.3.2-2ubuntu11_ia64.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.3.2-2ubuntu11) ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place (Reading database ... 10596 files and directories currently installed.) Preparing to replace gcc-4.3 4.3.2-2ubuntu8 (using .../gcc-4.3_4.3.2-2ubuntu11_ia64.deb) ... Unpacking replacement gcc-4.3 ... Preparing to replace g++-4.3 4.3.2-2ubuntu8 (using .../g++-4.3_4.3.2-2ubuntu11_ia64.deb) ... Unpacking replacement g++-4.3 ... Preparing to replace libstdc++6-4.3-dev 4.3.2-2ubuntu8 (using .../libstdc++6-4.3-dev_4.3.2-2ubuntu11_ia64.deb) ... Unpacking replacement libstdc++6-4.3-dev ... Preparing to replace libstdc++6 4.3.2-2ubuntu8 (using .../libstdc++6_4.3.2-2ubuntu11_ia64.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.3.2-2ubuntu11) ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place (Reading database ... 10596 files and directories currently installed.) Preparing to replace binutils 2.19-0ubuntu3 (using .../binutils_2.19.0.20090110-0ubuntu1_ia64.deb) ... Unpacking replacement binutils ... Preparing to replace libc6.1 2.9-0ubuntu5 (using .../libc6.1_2.9-0ubuntu7_ia64.deb) ... Unpacking replacement libc6.1 ... Setting up libc6.1 (2.9-0ubuntu7) ... Installing new version of config file /etc/init.d/glibc.sh ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place Selecting previously deselected package libvolume-id1. (Reading database ... 10596 files and directories currently installed.) Unpacking libvolume-id1 (from .../libvolume-id1_136-3_ia64.deb) ... Setting up libvolume-id1 (136-3) ... (Reading database ... 10603 files and directories currently installed.) Preparing to replace mount 2.14-1ubuntu2 (using .../mount_2.14-1ubuntu4_ia64.deb) ... Unpacking replacement mount ... Setting up mount (2.14-1ubuntu4) ... (Reading database ... 10603 files and directories currently installed.) Preparing to replace ncurses-bin 5.7-2ubuntu1 (using .../ncurses-bin_5.7+20081220-1ubuntu1_ia64.deb) ... Unpacking replacement ncurses-bin ... Setting up ncurses-bin (5.7+20081220-1ubuntu1) ... (Reading database ... 10605 files and directories currently installed.) Preparing to replace perl-modules 5.10.0-17ubuntu2 (using .../perl-modules_5.10.0-19ubuntu1_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace perl 5.10.0-17ubuntu2 (using .../perl_5.10.0-19ubuntu1_ia64.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.10.0-17ubuntu2 (using .../perl-base_5.10.0-19ubuntu1_ia64.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.10.0-19ubuntu1) ... (Reading database ... 10605 files and directories currently installed.) Preparing to replace util-linux 2.14-1ubuntu2 (using .../util-linux_2.14-1ubuntu4_ia64.deb) ... Unpacking replacement util-linux ... Setting up util-linux (2.14-1ubuntu4) ... (Reading database ... 10606 files and directories currently installed.) Preparing to replace bsdutils 1:2.14-1ubuntu2 (using .../bsdutils_1%3a2.14-1ubuntu4_ia64.deb) ... Unpacking replacement bsdutils ... Setting up bsdutils (1:2.14-1ubuntu4) ... (Reading database ... 10606 files and directories currently installed.) Preparing to replace libncurses5 5.7-2ubuntu1 (using .../libncurses5_5.7+20081220-1ubuntu1_ia64.deb) ... Unpacking replacement libncurses5 ... Setting up libncurses5 (5.7+20081220-1ubuntu1) ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place (Reading database ... 10606 files and directories currently installed.) Preparing to replace ncurses-base 5.7-2ubuntu1 (using .../ncurses-base_5.7+20081220-1ubuntu1_all.deb) ... Unpacking replacement ncurses-base ... Setting up ncurses-base (5.7+20081220-1ubuntu1) ... (Reading database ... 10606 files and directories currently installed.) Preparing to replace debconf-english 1.5.24ubuntu1 (using .../debconf-english_1.5.24ubuntu2_all.deb) ... Unpacking replacement debconf-english ... Setting up debconf-english (1.5.24ubuntu2) ... (Reading database ... 10606 files and directories currently installed.) Preparing to replace debconf 1.5.24ubuntu1 (using .../debconf_1.5.24ubuntu2_all.deb) ... Unpacking replacement debconf ... Setting up debconf (1.5.24ubuntu2) ... (Reading database ... 10606 files and directories currently installed.) Preparing to replace libcomerr2 1.41.3-1ubuntu1 (using .../libcomerr2_1.41.3-1ubuntu2_ia64.deb) ... Unpacking replacement libcomerr2 ... Setting up libcomerr2 (1.41.3-1ubuntu2) ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place (Reading database ... 10606 files and directories currently installed.) Preparing to replace e2fslibs 1.41.3-1ubuntu1 (using .../e2fslibs_1.41.3-1ubuntu2_ia64.deb) ... Unpacking replacement e2fslibs ... Setting up e2fslibs (1.41.3-1ubuntu2) ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place (Reading database ... 10606 files and directories currently installed.) Preparing to replace libuuid1 1.41.3-1ubuntu1 (using .../libuuid1_1.41.3-1ubuntu2_ia64.deb) ... Unpacking replacement libuuid1 ... Setting up libuuid1 (1.41.3-1ubuntu2) ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place (Reading database ... 10606 files and directories currently installed.) Preparing to replace libblkid1 1.41.3-1ubuntu1 (using .../libblkid1_1.41.3-1ubuntu2_ia64.deb) ... Unpacking replacement libblkid1 ... Setting up libblkid1 (1.41.3-1ubuntu2) ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place (Reading database ... 10606 files and directories currently installed.) Preparing to replace libdb4.7 4.7.25-5ubuntu1 (using .../libdb4.7_4.7.25-6ubuntu1_ia64.deb) ... Unpacking replacement libdb4.7 ... Setting up libdb4.7 (4.7.25-6ubuntu1) ... (Reading database ... 10606 files and directories currently installed.) Preparing to replace libpam-runtime 1.0.1-4ubuntu5.4 (using .../libpam-runtime_1.0.1-5ubuntu1_all.deb) ... Unpacking replacement libpam-runtime ... Setting up libpam-runtime (1.0.1-5ubuntu1) ... (Reading database ... 10606 files and directories currently installed.) Preparing to replace libpam0g 1.0.1-4ubuntu5.4 (using .../libpam0g_1.0.1-5ubuntu1_ia64.deb) ... Unpacking replacement libpam0g ... Setting up libpam0g (1.0.1-5ubuntu1) ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place (Reading database ... 10606 files and directories currently installed.) Preparing to replace libss2 1.41.3-1ubuntu1 (using .../libss2_1.41.3-1ubuntu2_ia64.deb) ... Unpacking replacement libss2 ... Setting up libss2 (1.41.3-1ubuntu2) ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place (Reading database ... 10606 files and directories currently installed.) Preparing to replace python2.5-minimal 2.5.2-14ubuntu1 (using .../python2.5-minimal_2.5.4-0ubuntu1_ia64.deb) ... Unpacking replacement python2.5-minimal ... Setting up python2.5-minimal (2.5.4-0ubuntu1) ... (Reading database ... 10606 files and directories currently installed.) Preparing to replace libdevmapper1.02.1 2:1.02.27-4ubuntu1 (using .../libdevmapper1.02.1_2%3a1.02.27-4ubuntu3_ia64.deb) ... Unpacking replacement libdevmapper1.02.1 ... Preparing to replace dmsetup 2:1.02.27-4ubuntu1 (using .../dmsetup_2%3a1.02.27-4ubuntu3_ia64.deb) ... Unpacking replacement dmsetup ... dpkg: warning - unable to delete old directory `/etc/udev/rules.d': Directory not empty dpkg: warning - unable to delete old directory `/etc/udev': Directory not empty Preparing to replace bash-completion 20060301-4ubuntu2 (using .../bash-completion_20080705ubuntu1_all.deb) ... Unpacking replacement bash-completion ... Preparing to replace dpkg-dev 1.14.22ubuntu1 (using .../dpkg-dev_1.14.24ubuntu1_all.deb) ... Unpacking replacement dpkg-dev ... Preparing to replace fakeroot 1.11ubuntu1 (using .../fakeroot_1.12.1ubuntu1_ia64.deb) ... Unpacking replacement fakeroot ... Preparing to replace libpam-foreground 0.4-1 (using .../libpam-foreground_0.5_ia64.deb) ... Unpacking replacement libpam-foreground ... Preparing to replace perl-doc 5.10.0-17ubuntu2 (using .../perl-doc_5.10.0-19ubuntu1_all.deb) ... Leaving `diversion of /usr/bin/perldoc to /usr/bin/perldoc.stub by perl-doc' Unpacking replacement perl-doc ... Preparing to replace pkgbinarymangler 50 (using .../pkgbinarymangler_51_all.deb) ... Unpacking replacement pkgbinarymangler ... Setting up libc6.1-dev (2.9-0ubuntu7) ... Setting up libgomp1 (4.3.2-2ubuntu11) ... Setting up cpp-4.3 (4.3.2-2ubuntu11) ... Setting up binutils (2.19.0.20090110-0ubuntu1) ... Setting up gcc-4.3 (4.3.2-2ubuntu11) ... Setting up libdevmapper1.02.1 (2:1.02.27-4ubuntu3) ... Setting up dmsetup (2:1.02.27-4ubuntu3) ... Setting up bash-completion (20080705ubuntu1) ... Installing new version of config file /etc/bash_completion ... Setting up fakeroot (1.12.1ubuntu1) ... Setting up libpam-foreground (0.5) ... Setting up pkgbinarymangler (51) ... Setting up g++-4.3 (4.3.2-2ubuntu11) ... Setting up perl-modules (5.10.0-19ubuntu1) ... Setting up libstdc++6-4.3-dev (4.3.2-2ubuntu11) ... Setting up perl (5.10.0-19ubuntu1) ... Setting up dpkg-dev (1.14.24ubuntu1) ... Setting up perl-doc (5.10.0-19ubuntu1) ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '834395-1938933', '--nolog', '--batch', '--archive=ubuntu', '--purpose=PRIMARY', '--dist=jaunty', '--comp=universe', 'minc_2.0.16-4.dsc'] Initiating build Automatic build of minc_2.0.16-4 on hooker by sbuild/ia64 1.170.5 Build started at 20090112-1506 ****************************************************************************** minc_2.0.16-4.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: cdbs, debhelper (>= 5), csh, libnetcdf-dev, zlib1g-dev, texlive-latex-base, libhdf5-openmpi-dev [!arm !armel !hppa !mips !mipsel !s390], libhdf5-lam-dev [arm armel hppa mips mipsel s390] Checking for already installed source dependencies... cdbs: missing debhelper: missing csh: missing libnetcdf-dev: missing zlib1g-dev: missing texlive-latex-base: missing libhdf5-openmpi-dev: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install cdbs debhelper csh libnetcdf-dev zlib1g-dev texlive-latex-base libhdf5-openmpi-dev Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: dmsetup libdevmapper1.02.1 sysvutils perl-doc Use 'apt-get autoremove' to remove them. The following extra packages will be installed: adduser autoconf automake autotools-dev bsdmainutils defoma ed fdupes file fontconfig-config gettext gettext-base groff-base html2text intltool intltool-debian libcroco3 libexpat1 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libhdf5-openmpi-1.6.6-0 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libibverbs1 libice6 libjpeg62 libjpeg62-dev libkpathsea4 libmagic1 libnetcdf4 libnewt0.52 libopenmpi-dev libopenmpi1 libpng12-0 libpoppler3 libpopt0 libsm6 liburi-perl libwww-perl libx11-6 libx11-data libxau6 libxaw7 libxcb-xlib0 libxcb1 libxdmcp6 libxext6 libxml-parser-perl libxml2 libxmu6 libxpm4 libxt6 m4 man-db mime-support netbase openmpi-common po-debconf tex-common texlive-base texlive-base-bin texlive-common texlive-doc-base ttf-dejavu ttf-dejavu-core ttf-dejavu-extra whiptail x11-common Suggested packages: liblocale-gettext-perl ecryptfs-utils autoconf2.13 autobook autoconf-archive gnu-standards autoconf-doc libtool wamerican wordlist whois vacation devscripts doc-base dh-make defoma-doc psfontmgr x-ttcidfont-conf dfontmgr libft-perl cvs gettext-doc groff libfreetype6-dev libhdf5-doc libdata-dump-perl gfortran netcdf-bin libio-socket-ssl-perl less www-browser libmail-box-perl perl-tk ghostscript xpdf-reader pdf-viewer gv postscript-viewer Recommended packages: curl wget lynx libglib2.0-data netcdf-doc libfribidi0 libmailtools-perl libhtml-format-perl libcompress-zlib-perl xml-core ifupdown libmail-sendmail-perl dvipdfmx lmodern texlive-base-bin-doc texlive-latex-base-doc The following NEW packages will be installed: adduser autoconf automake autotools-dev bsdmainutils cdbs csh debhelper defoma ed fdupes file fontconfig-config gettext gettext-base groff-base html2text intltool intltool-debian libcroco3 libexpat1 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libhdf5-openmpi-1.6.6-0 libhdf5-openmpi-dev libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libibverbs1 libice6 libjpeg62 libjpeg62-dev libkpathsea4 libmagic1 libnetcdf-dev libnetcdf4 libnewt0.52 libopenmpi-dev libopenmpi1 libpng12-0 libpoppler3 libpopt0 libsm6 liburi-perl libwww-perl libx11-6 libx11-data libxau6 libxaw7 libxcb-xlib0 libxcb1 libxdmcp6 libxext6 libxml-parser-perl libxml2 libxmu6 libxpm4 libxt6 m4 man-db mime-support netbase openmpi-common po-debconf tex-common texlive-base texlive-base-bin texlive-common texlive-doc-base texlive-latex-base ttf-dejavu ttf-dejavu-core ttf-dejavu-extra whiptail x11-common zlib1g-dev 0 upgraded, 78 newly installed, 0 to remove and 0 not upgraded. Need to get 7105kB/42.0MB of archives. After this operation, 147MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! x11-common libice6 libsm6 libxau6 libxdmcp6 libxcb1 libxcb-xlib0 libx11-data libx11-6 libxt6 adduser libmagic1 file libnewt0.52 libpopt0 mime-support netbase whiptail bsdmainutils ed gettext-base groff-base libexpat1 libhtml-tagset-perl liburi-perl libhtml-parser-perl libhtml-tree-perl libwww-perl libxext6 libxml-parser-perl libxml2 man-db m4 autoconf autotools-dev automake html2text libglib2.0-0 libcroco3 gettext intltool-debian po-debconf debhelper fdupes intltool cdbs csh defoma ttf-dejavu-core ttf-dejavu-extra ttf-dejavu fontconfig-config libfreetype6 libfontconfig1 libgfortran3 libjpeg62 libjpeg62-dev libkpathsea4 libnetcdf4 libnetcdf-dev libpng12-0 libpoppler3 libxmu6 libxpm4 libxaw7 openmpi-common tex-common texlive-common texlive-doc-base texlive-base-bin texlive-base texlive-latex-base zlib1g-dev libibverbs1 libopenmpi1 libhdf5-openmpi-1.6.6-0 libopenmpi-dev libhdf5-openmpi-dev Authentication warning overridden. Get:1 http://ftpmaster.internal jaunty/universe csh 20070713-1 [299kB] Get:2 http://ftpmaster.internal jaunty/main libgfortran3 4.3.2-2ubuntu11 [329kB] Get:3 http://ftpmaster.internal jaunty/universe libnetcdf4 1:3.6.2-3.1 [239kB] Get:4 http://ftpmaster.internal jaunty/universe libnetcdf-dev 1:3.6.2-3.1 [317kB] Get:5 http://ftpmaster.internal jaunty/universe openmpi-common 1.2.8-3ubuntu1 [52.5kB] Get:6 http://ftpmaster.internal jaunty/universe libibverbs1 1.1.2-1ubuntu1 [40.8kB] Get:7 http://ftpmaster.internal jaunty/universe libopenmpi1 1.2.8-3ubuntu1 [1637kB] Get:8 http://ftpmaster.internal jaunty/universe libhdf5-openmpi-1.6.6-0 1.6.6-4ubuntu1 [662kB] Get:9 http://ftpmaster.internal jaunty/universe libopenmpi-dev 1.2.8-3ubuntu1 [2601kB] Get:10 http://ftpmaster.internal jaunty/universe libhdf5-openmpi-dev 1.6.6-4ubuntu1 [928kB] dpkg-preconfigure: unable to re-open stdin: Fetched 7105kB in 1s (4213kB/s) Selecting previously deselected package x11-common. (Reading database ... 10608 files and directories currently installed.) Unpacking x11-common (from .../x11-common_1%3a7.4~5ubuntu10_all.deb) ... Selecting previously deselected package libice6. Unpacking libice6 (from .../libice6_2%3a1.0.4-1_ia64.deb) ... Selecting previously deselected package libsm6. Unpacking libsm6 (from .../libsm6_2%3a1.1.0-1_ia64.deb) ... Selecting previously deselected package libxau6. Unpacking libxau6 (from .../libxau6_1%3a1.0.4-1_ia64.deb) ... Selecting previously deselected package libxdmcp6. Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.0.2-3_ia64.deb) ... Selecting previously deselected package libxcb1. Unpacking libxcb1 (from .../libxcb1_1.1-1.1_ia64.deb) ... Selecting previously deselected package libxcb-xlib0. Unpacking libxcb-xlib0 (from .../libxcb-xlib0_1.1-1.1_ia64.deb) ... Selecting previously deselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.1.5-2ubuntu2_all.deb) ... Selecting previously deselected package libx11-6. Unpacking libx11-6 (from .../libx11-6_2%3a1.1.5-2ubuntu2_ia64.deb) ... Setting up x11-common (1:7.4~5ubuntu10) ... Selecting previously deselected package libxt6. (Reading database ... 10954 files and directories currently installed.) Unpacking libxt6 (from .../libxt6_1%3a1.0.5-3_ia64.deb) ... Selecting previously deselected package adduser. Unpacking adduser (from .../adduser_3.110ubuntu2_all.deb) ... Selecting previously deselected package libmagic1. Unpacking libmagic1 (from .../libmagic1_4.26-2_ia64.deb) ... Selecting previously deselected package file. Unpacking file (from .../archives/file_4.26-2_ia64.deb) ... Selecting previously deselected package libnewt0.52. Unpacking libnewt0.52 (from .../libnewt0.52_0.52.2-11.3ubuntu1_ia64.deb) ... Selecting previously deselected package libpopt0. Unpacking libpopt0 (from .../libpopt0_1.14-4_ia64.deb) ... Selecting previously deselected package mime-support. Unpacking mime-support (from .../mime-support_3.44-1_all.deb) ... 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Setting up libxext6 (2:1.0.4-1) ... Setting up libxml-parser-perl (2.36-1.1build2) ... Setting up libxml2 (2.6.32.dfsg-5ubuntu1) ... Setting up man-db (2.5.3-2) ... Building database of manual pages ... ... skipping, since this is a buildd Setting up m4 (1.4.11-1) ... Setting up autoconf (2.61-7ubuntu1) ... Setting up autotools-dev (20080123.2) ... Setting up automake (1:1.10.1-3) ... Setting up html2text (1.3.2a-5) ... Setting up libglib2.0-0 (2.19.4-0ubuntu1) ... Setting up libcroco3 (0.6.1-2) ... Setting up gettext (0.17-6ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.15ubuntu1) ... Setting up debhelper (7.0.17ubuntu2) ... Setting up fdupes (1.50-PR2-1) ... Setting up intltool (0.40.5-1) ... Setting up cdbs (0.4.52ubuntu10) ... Setting up csh (20070713-1) ... Setting up defoma (0.11.10-0.2ubuntu1) ... Setting up ttf-dejavu-core (2.25-3) ... Setting up ttf-dejavu-extra (2.25-3) ... Setting up ttf-dejavu (2.25-3) ... Setting up fontconfig-config (2.6.0-1ubuntu4) ... Setting up libfreetype6 (2.3.7-2ubuntu1) ... Setting up libfontconfig1 (2.6.0-1ubuntu4) ... Setting up libgfortran3 (4.3.2-2ubuntu11) ... Setting up libjpeg62 (6b-14) ... Setting up libjpeg62-dev (6b-14) ... Setting up libkpathsea4 (2007.dfsg.2-4) ... Setting up libnetcdf4 (1:3.6.2-3.1) ... Setting up libnetcdf-dev (1:3.6.2-3.1) ... Setting up libpng12-0 (1.2.27-2ubuntu1) ... Setting up libpoppler3 (0.8.7-1ubuntu1) ... Setting up libxmu6 (2:1.0.4-1) ... Setting up libxpm4 (1:3.5.7-1) ... Setting up libxaw7 (2:1.0.5-1) ... Setting up openmpi-common (1.2.8-3ubuntu1) ... Setting up tex-common (1.11.3) ... Creating config file /etc/texmf/texmf.d/05TeXMF.cnf with new version Creating config file /etc/texmf/texmf.d/15Plain.cnf with new version Creating config file /etc/texmf/texmf.d/45TeXinputs.cnf with new version Creating config file /etc/texmf/texmf.d/55Fonts.cnf with new version Creating config file /etc/texmf/texmf.d/65BibTeX.cnf with new version Creating config file /etc/texmf/texmf.d/75DviPS.cnf with new version Creating config file /etc/texmf/texmf.d/85Misc.cnf with new version Creating config file /etc/texmf/texmf.d/90TeXDoc.cnf with new version Creating config file /etc/texmf/texmf.d/95NonPath.cnf with new version Creating config file /etc/texmf/updmap.d/00updmap.cfg with new version Creating config file /etc/texmf/texmf.cnf with new version Setting up texlive-common (2007.dfsg.1-4) ... Setting up texlive-doc-base (2007.dfsg.1-1) ... Running mktexlsr. This may take some time... done. Setting up texlive-base-bin (2007.dfsg.2-4) ... Running mktexlsr. This may take some time... done. Building format(s) --all. This may take some time... done. Setting up texlive-base (2007.dfsg.1-4) ... Running mktexlsr. This may take some time... done. Building format(s) --all. This may take some time... done. Running updmap-sys. This may take some time... done. Setting up texlive-latex-base (2007.dfsg.1-4) ... Running mktexlsr. This may take some time... done. Running updmap-sys. This may take some time... done. Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-latex-base.cnf. This may take some time... done. Setting up zlib1g-dev (1:1.2.3.3.dfsg-12ubuntu1) ... Setting up libibverbs1 (1.1.2-1ubuntu1) ... Setting up libopenmpi1 (1.2.8-3ubuntu1) ... Setting up libhdf5-openmpi-1.6.6-0 (1.6.6-4ubuntu1) ... Setting up libopenmpi-dev (1.2.8-3ubuntu1) ... Setting up libhdf5-openmpi-dev (1.6.6-4ubuntu1) ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6.1-dev_2.9-0ubuntu7 make_3.81-5 dpkg-dev_1.14.24ubuntu1 g++-4.3_4.3.2-2ubuntu11 gcc-4.3_4.3.2-2ubuntu11 binutils_2.19.0.20090110-0ubuntu1 libstdc++6_4.3.2-2ubuntu11 libstdc++6-4.3-dev_4.3.2-2ubuntu11 ------------------------------------------------------------------------------ sh: gcc: not found dpkg-source: warning: Couldn't determine gcc system type, falling back to default (native compilation) gpg: Signature made Sat Jan 3 22:33:03 2009 GMT using DSA key ID 21DB31C5 gpg: Can't check signature: public key not found dpkg-source: extracting minc in minc-2.0.16 dpkg-source: unpacking minc_2.0.16.orig.tar.gz dpkg-source: applying /srv/hooker.ubuntu.com/home/buildd/build-834395-1938933/minc_2.0.16-4.diff.gz dpkg-buildpackage: set CFLAGS to default value: -g -O2 dpkg-buildpackage: set CPPFLAGS to default value: dpkg-buildpackage: set LDFLAGS to default value: -Wl,-Bsymbolic-functions dpkg-buildpackage: set FFLAGS to default value: -g -O2 dpkg-buildpackage: set CXXFLAGS to default value: -g -O2 dpkg-buildpackage: source package minc dpkg-buildpackage: source version 2.0.16-4 dpkg-buildpackage: host architecture ia64 /usr/bin/fakeroot debian/rules clean test -x debian/rules dh_testroot for i in ./ac_config_aux/config.guess ./ac_config_aux/config.sub ; do \ if test -e $i.cdbs-orig ; then \ mv $i.cdbs-orig $i ; \ fi ; \ done dh_clean /usr/bin/make -C . -k distclean make[1]: Entering directory `/build/buildd/minc-2.0.16' make[1]: *** No rule to make target `distclean'. make[1]: Leaving directory `/build/buildd/minc-2.0.16' make: [makefile-clean] Error 2 (ignored) rm -f debian/stamp-makefile-build rm -f debian/stamp-autotools-files /usr/bin/make -f debian/rules reverse-config make[1]: Entering directory `/build/buildd/minc-2.0.16' for i in ./ac_config_aux/config.guess ./ac_config_aux/config.sub ; do \ if test -e $i.cdbs-orig ; then \ mv $i.cdbs-orig $i ; \ fi ; \ done make[1]: Leaving directory `/build/buildd/minc-2.0.16' if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi patches: debian/patches/01_mincedit-sensible-viewer.diff debian/patches/03_mincview.diff debian/patches/04_manpages.diff debian/patches/05_parseargv.diff Patch debian/patches/05_parseargv.diff is not applied. Patch debian/patches/04_manpages.diff is not applied. Patch debian/patches/03_mincview.diff is not applied. Patch debian/patches/01_mincedit-sensible-viewer.diff is not applied. if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi if [ "reverse-patches" != "reverse-patches" ] ; then \ /usr/bin/make -f debian/rules update-config ; \ fi for dir in debian/patches ; do \ rm -f $dir/*.log ; \ done debian/rules build test -x debian/rules mkdir -p "." /usr/bin/make -f debian/rules reverse-config make[1]: Entering directory `/build/buildd/minc-2.0.16' for i in ./ac_config_aux/config.guess ./ac_config_aux/config.sub ; do \ if test -e $i.cdbs-orig ; then \ mv $i.cdbs-orig $i ; \ fi ; \ done make[1]: Leaving directory `/build/buildd/minc-2.0.16' if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi patches: debian/patches/01_mincedit-sensible-viewer.diff debian/patches/03_mincview.diff debian/patches/04_manpages.diff debian/patches/05_parseargv.diff Trying patch debian/patches/01_mincedit-sensible-viewer.diff at level 1 ... success. Trying patch debian/patches/03_mincview.diff at level 1 ... 0 ... success. Trying patch debian/patches/04_manpages.diff at level 1 ... 0 ... success. Trying patch debian/patches/05_parseargv.diff at level 1 ... 0 ... success. if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi if [ "debian/stamp-patched" != "reverse-patches" ] ; then \ /usr/bin/make -f debian/rules update-config ; \ fi make[1]: Entering directory `/build/buildd/minc-2.0.16' if test -e /usr/share/misc/config.guess ; then \ for i in ./ac_config_aux/config.guess ; do \ if ! test -e $i.cdbs-orig ; then \ mv $i $i.cdbs-orig ; \ cp --remove-destination /usr/share/misc/config.guess $i ; \ fi ; \ done ; \ fi if test -e /usr/share/misc/config.sub ; then \ for i in ./ac_config_aux/config.sub ; do \ if ! test -e $i.cdbs-orig ; then \ mv $i $i.cdbs-orig ; \ cp --remove-destination /usr/share/misc/config.sub $i ; \ fi ; \ done ; \ fi make[1]: Leaving directory `/build/buildd/minc-2.0.16' if test -e /usr/share/misc/config.guess ; then \ for i in ./ac_config_aux/config.guess ; do \ if ! test -e $i.cdbs-orig ; then \ mv $i $i.cdbs-orig ; \ cp --remove-destination /usr/share/misc/config.guess $i ; \ fi ; \ done ; \ fi if test -e /usr/share/misc/config.sub ; then \ for i in ./ac_config_aux/config.sub ; do \ if ! test -e $i.cdbs-orig ; then \ mv $i $i.cdbs-orig ; \ cp --remove-destination /usr/share/misc/config.sub $i ; \ fi ; \ done ; \ fi touch debian/stamp-autotools-files chmod a+x /build/buildd/minc-2.0.16/./configure cd . && CC="cc" CXX="g++" CFLAGS="-I/usr/include/mpi" CXXFLAGS="-g -O2 -g -Wall -O2" CPPFLAGS="" LDFLAGS="-Wl,-Bsymbolic-functions" /build/buildd/minc-2.0.16/./configure --build=ia64-linux-gnu --prefix=/usr --includedir="\${prefix}/include" --mandir="\${prefix}/share/man" --infodir="\${prefix}/share/info" --sysconfdir=/etc --localstatedir=/var --libexecdir="\${prefix}/lib/minc" --disable-maintainer-mode --disable-dependency-tracking --srcdir=. --enable-shared --enable-minc2 --enable-acr-nema CFLAGS="-I/usr/include/mpi" checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether ln -s works... yes checking whether make sets $(MAKE)... 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(cached) ranlib checking for strip... strip checking if cc supports -fno-rtti -fno-exceptions... no checking for cc option to produce PIC... -fPIC checking if cc PIC flag -fPIC works... yes checking if cc static flag -static works... yes checking if cc supports -c -o file.o... yes checking whether the cc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC checking if g++ PIC flag -fPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so (cached) (cached) checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking for library m... yes checking for library netcdf... yes checking for library z... yes checking for library hdf5... yes checking for strdup... yes checking for mkstemp... yes checking for tempnam... yes checking for tmpnam... yes checking for getpwnam... yes checking for select... yes checking for strerror... yes checking for sysconf... yes checking for pid_t... yes checking vfork.h usability... no checking vfork.h presence... no checking for vfork.h... no checking for fork... yes checking for vfork... yes checking for working fork... yes checking for working vfork... (cached) yes checking for system... yes checking for popen... yes configure: creating ./config.status config.status: creating Makefile config.status: creating epm-header config.status: creating doc/Makefile config.status: creating testdir/Makefile config.status: creating libsrc2/Makefile config.status: creating libsrc2/test/Makefile config.status: creating volume_io/Makefile config.status: creating volume_io/Documentation/Makefile config.status: creating volume_io/Testing/Makefile config.status: creating progs/xfm/xfmflip config.status: creating config.h config.status: executing depfiles commands /usr/bin/make -C . all make[1]: Entering directory `/build/buildd/minc-2.0.16' /usr/bin/make all-recursive make[2]: Entering directory `/build/buildd/minc-2.0.16' Making all in . make[3]: Entering directory `/build/buildd/minc-2.0.16' /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/ParseArgv.lo libsrc/ParseArgv.c mkdir libsrc/.libs cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/ParseArgv.c -fPIC -DPIC -o libsrc/.libs/ParseArgv.o libsrc/ParseArgv.c: In function 'ParseArgv': libsrc/ParseArgv.c:177: warning: cast from pointer to integer of different size libsrc/ParseArgv.c:180: warning: cast from pointer to integer of different size libsrc/ParseArgv.c:202: warning: cast from pointer to integer of different size libsrc/ParseArgv.c:225: warning: cast from pointer to integer of different size libsrc/ParseArgv.c:241: warning: cast from pointer to integer of different size libsrc/ParseArgv.c: In function 'PrintUsage': libsrc/ParseArgv.c:402: warning: cast from pointer to integer of different size libsrc/ParseArgv.c:411: warning: cast from pointer to integer of different size libsrc/ParseArgv.c:421: warning: cast from pointer to integer of different size cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/ParseArgv.c -o libsrc/ParseArgv.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/dim_conversion.lo libsrc/dim_conversion.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/dim_conversion.c -fPIC -DPIC -o libsrc/.libs/dim_conversion.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/dim_conversion.c -o libsrc/dim_conversion.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/image_conversion.lo libsrc/image_conversion.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/image_conversion.c -fPIC -DPIC -o libsrc/.libs/image_conversion.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/image_conversion.c -o libsrc/image_conversion.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/minc_convenience.lo libsrc/minc_convenience.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/minc_convenience.c -fPIC -DPIC -o libsrc/.libs/minc_convenience.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/minc_convenience.c -o libsrc/minc_convenience.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/minc_error.lo libsrc/minc_error.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/minc_error.c -fPIC -DPIC -o libsrc/.libs/minc_error.o libsrc/minc_error.c: In function 'MI_log_pkg_error2': libsrc/minc_error.c:177: warning: format not a string literal and no format arguments libsrc/minc_error.c: In function 'MI_log_sys_error1': libsrc/minc_error.c:194: warning: format not a string literal and no format arguments cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/minc_error.c -o libsrc/minc_error.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/nd_loop.lo libsrc/nd_loop.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/nd_loop.c -fPIC -DPIC -o libsrc/.libs/nd_loop.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/nd_loop.c -o libsrc/nd_loop.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/netcdf_convenience.lo libsrc/netcdf_convenience.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/netcdf_convenience.c -fPIC -DPIC -o libsrc/.libs/netcdf_convenience.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/netcdf_convenience.c -o libsrc/netcdf_convenience.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/time_stamp.lo libsrc/time_stamp.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/time_stamp.c -fPIC -DPIC -o libsrc/.libs/time_stamp.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/time_stamp.c -o libsrc/time_stamp.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/value_conversion.lo libsrc/value_conversion.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/value_conversion.c -fPIC -DPIC -o libsrc/.libs/value_conversion.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/value_conversion.c -o libsrc/value_conversion.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/voxel_loop.lo libsrc/voxel_loop.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/voxel_loop.c -fPIC -DPIC -o libsrc/.libs/voxel_loop.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/voxel_loop.c -o libsrc/voxel_loop.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/hdf_convenience.lo libsrc/hdf_convenience.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/hdf_convenience.c -fPIC -DPIC -o libsrc/.libs/hdf_convenience.o libsrc/hdf_convenience.c: In function 'hdf_attput': libsrc/hdf_convenience.c:1110: warning: cast to pointer from integer of different size libsrc/hdf_convenience.c: In function 'hdf_copy_attr': libsrc/hdf_convenience.c:2043: warning: cast from pointer to integer of different size cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/hdf_convenience.c -o libsrc/hdf_convenience.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/minc_compat.lo libsrc/minc_compat.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/minc_compat.c -fPIC -DPIC -o libsrc/.libs/minc_compat.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/minc_compat.c -o libsrc/minc_compat.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc/minc_simple.lo libsrc/minc_simple.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/minc_simple.c -fPIC -DPIC -o libsrc/.libs/minc_simple.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc/minc_simple.c -o libsrc/minc_simple.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/convert.lo libsrc2/convert.c mkdir libsrc2/.libs cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/convert.c -fPIC -DPIC -o libsrc2/.libs/convert.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/convert.c -o libsrc2/convert.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/datatype.lo libsrc2/datatype.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/datatype.c -fPIC -DPIC -o libsrc2/.libs/datatype.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/datatype.c -o libsrc2/datatype.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/dimension.lo libsrc2/dimension.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/dimension.c -fPIC -DPIC -o libsrc2/.libs/dimension.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/dimension.c -o libsrc2/dimension.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/free.lo libsrc2/free.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/free.c -fPIC -DPIC -o libsrc2/.libs/free.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/free.c -o libsrc2/free.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/grpattr.lo libsrc2/grpattr.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/grpattr.c -fPIC -DPIC -o libsrc2/.libs/grpattr.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/grpattr.c -o libsrc2/grpattr.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/hyper.lo libsrc2/hyper.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/hyper.c -fPIC -DPIC -o libsrc2/.libs/hyper.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/hyper.c -o libsrc2/hyper.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/label.lo libsrc2/label.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/label.c -fPIC -DPIC -o libsrc2/.libs/label.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/label.c -o libsrc2/label.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/m2util.lo libsrc2/m2util.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/m2util.c -fPIC -DPIC -o libsrc2/.libs/m2util.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/m2util.c -o libsrc2/m2util.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/record.lo libsrc2/record.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/record.c -fPIC -DPIC -o libsrc2/.libs/record.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/record.c -o libsrc2/record.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/slice.lo libsrc2/slice.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/slice.c -fPIC -DPIC -o libsrc2/.libs/slice.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/slice.c -o libsrc2/slice.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/valid.lo libsrc2/valid.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/valid.c -fPIC -DPIC -o libsrc2/.libs/valid.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/valid.c -o libsrc2/valid.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/volprops.lo libsrc2/volprops.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/volprops.c -fPIC -DPIC -o libsrc2/.libs/volprops.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/volprops.c -o libsrc2/volprops.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o libsrc2/volume.lo libsrc2/volume.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/volume.c -fPIC -DPIC -o libsrc2/.libs/volume.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c libsrc2/volume.c -o libsrc2/volume.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -version-info 2:1:1 -Wl,-Bsymbolic-functions -o libminc2.la -rpath /usr/lib libsrc/ParseArgv.lo libsrc/dim_conversion.lo libsrc/image_conversion.lo libsrc/minc_convenience.lo libsrc/minc_error.lo libsrc/nd_loop.lo libsrc/netcdf_convenience.lo libsrc/time_stamp.lo libsrc/value_conversion.lo libsrc/voxel_loop.lo libsrc/hdf_convenience.lo libsrc/minc_compat.lo libsrc/minc_simple.lo libsrc2/convert.lo libsrc2/datatype.lo libsrc2/dimension.lo libsrc2/free.lo libsrc2/grpattr.lo libsrc2/hyper.lo libsrc2/label.lo libsrc2/m2util.lo libsrc2/record.lo libsrc2/slice.lo libsrc2/valid.lo libsrc2/volprops.lo libsrc2/volume.lo -lhdf5 -lz -lnetcdf -lm mkdir .libs cc -shared libsrc/.libs/ParseArgv.o libsrc/.libs/dim_conversion.o libsrc/.libs/image_conversion.o libsrc/.libs/minc_convenience.o libsrc/.libs/minc_error.o libsrc/.libs/nd_loop.o libsrc/.libs/netcdf_convenience.o libsrc/.libs/time_stamp.o libsrc/.libs/value_conversion.o libsrc/.libs/voxel_loop.o libsrc/.libs/hdf_convenience.o libsrc/.libs/minc_compat.o libsrc/.libs/minc_simple.o libsrc2/.libs/convert.o libsrc2/.libs/datatype.o libsrc2/.libs/dimension.o libsrc2/.libs/free.o libsrc2/.libs/grpattr.o libsrc2/.libs/hyper.o libsrc2/.libs/label.o libsrc2/.libs/m2util.o libsrc2/.libs/record.o libsrc2/.libs/slice.o libsrc2/.libs/valid.o libsrc2/.libs/volprops.o libsrc2/.libs/volume.o /usr/lib/libhdf5.so -lz -lnetcdf -lm -Wl,-Bsymbolic-functions -Wl,-soname -Wl,libminc2.so.1 -o .libs/libminc2.so.1.1.1 (cd .libs && rm -f libminc2.so.1 && ln -s libminc2.so.1.1.1 libminc2.so.1) (cd .libs && rm -f libminc2.so && ln -s libminc2.so.1.1.1 libminc2.so) ar cru .libs/libminc2.a libsrc/ParseArgv.o libsrc/dim_conversion.o libsrc/image_conversion.o libsrc/minc_convenience.o libsrc/minc_error.o libsrc/nd_loop.o libsrc/netcdf_convenience.o libsrc/time_stamp.o libsrc/value_conversion.o libsrc/voxel_loop.o libsrc/hdf_convenience.o libsrc/minc_compat.o libsrc/minc_simple.o libsrc2/convert.o libsrc2/datatype.o libsrc2/dimension.o libsrc2/free.o libsrc2/grpattr.o libsrc2/hyper.o libsrc2/label.o libsrc2/m2util.o libsrc2/record.o libsrc2/slice.o libsrc2/valid.o libsrc2/volprops.o libsrc2/volume.o ranlib .libs/libminc2.a creating libminc2.la (cd .libs && rm -f libminc2.la && ln -s ../libminc2.la libminc2.la) /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Geometry/colour.lo volume_io/Geometry/colour.c mkdir volume_io/Geometry/.libs cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/colour.c -fPIC -DPIC -o volume_io/Geometry/.libs/colour.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/colour.c -o volume_io/Geometry/colour.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Geometry/colour_def.lo volume_io/Geometry/colour_def.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/colour_def.c -fPIC -DPIC -o volume_io/Geometry/.libs/colour_def.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/colour_def.c -o volume_io/Geometry/colour_def.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Geometry/gaussian.lo volume_io/Geometry/gaussian.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/gaussian.c -fPIC -DPIC -o volume_io/Geometry/.libs/gaussian.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/gaussian.c -o volume_io/Geometry/gaussian.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Geometry/inverse.lo volume_io/Geometry/inverse.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/inverse.c -fPIC -DPIC -o volume_io/Geometry/.libs/inverse.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/inverse.c -o volume_io/Geometry/inverse.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Geometry/newton.lo volume_io/Geometry/newton.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/newton.c -fPIC -DPIC -o volume_io/Geometry/.libs/newton.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/newton.c -o volume_io/Geometry/newton.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Geometry/points.lo volume_io/Geometry/points.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/points.c -fPIC -DPIC -o volume_io/Geometry/.libs/points.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/points.c -o volume_io/Geometry/points.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Geometry/splines.lo volume_io/Geometry/splines.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/splines.c -fPIC -DPIC -o volume_io/Geometry/.libs/splines.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/splines.c -o volume_io/Geometry/splines.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Geometry/tensors.lo volume_io/Geometry/tensors.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/tensors.c -fPIC -DPIC -o volume_io/Geometry/.libs/tensors.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/tensors.c -o volume_io/Geometry/tensors.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Geometry/transforms.lo volume_io/Geometry/transforms.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/transforms.c -fPIC -DPIC -o volume_io/Geometry/.libs/transforms.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Geometry/transforms.c -o volume_io/Geometry/transforms.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/MNI_formats/gen_xf_io.lo volume_io/MNI_formats/gen_xf_io.c mkdir volume_io/MNI_formats/.libs cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/MNI_formats/gen_xf_io.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/gen_xf_io.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/MNI_formats/gen_xf_io.c -o volume_io/MNI_formats/gen_xf_io.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/MNI_formats/gen_xfs.lo volume_io/MNI_formats/gen_xfs.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/MNI_formats/gen_xfs.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/gen_xfs.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/MNI_formats/gen_xfs.c -o volume_io/MNI_formats/gen_xfs.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/MNI_formats/grid_transforms.lo volume_io/MNI_formats/grid_transforms.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/MNI_formats/grid_transforms.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/grid_transforms.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/MNI_formats/grid_transforms.c -o volume_io/MNI_formats/grid_transforms.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/MNI_formats/mni_io.lo volume_io/MNI_formats/mni_io.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/MNI_formats/mni_io.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/mni_io.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/MNI_formats/mni_io.c -o volume_io/MNI_formats/mni_io.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/MNI_formats/tag_points.lo volume_io/MNI_formats/tag_points.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/MNI_formats/tag_points.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/tag_points.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/MNI_formats/tag_points.c -o volume_io/MNI_formats/tag_points.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/MNI_formats/thin_plate_spline.lo volume_io/MNI_formats/thin_plate_spline.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/MNI_formats/thin_plate_spline.c -fPIC -DPIC -o volume_io/MNI_formats/.libs/thin_plate_spline.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/MNI_formats/thin_plate_spline.c -o volume_io/MNI_formats/thin_plate_spline.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Prog_utils/alloc.lo volume_io/Prog_utils/alloc.c mkdir volume_io/Prog_utils/.libs cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/alloc.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/alloc.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/alloc.c -o volume_io/Prog_utils/alloc.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Prog_utils/alloc_check.lo volume_io/Prog_utils/alloc_check.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/alloc_check.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/alloc_check.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/alloc_check.c -o volume_io/Prog_utils/alloc_check.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Prog_utils/arrays.lo volume_io/Prog_utils/arrays.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/arrays.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/arrays.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/arrays.c -o volume_io/Prog_utils/arrays.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Prog_utils/files.lo volume_io/Prog_utils/files.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/files.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/files.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/files.c -o volume_io/Prog_utils/files.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Prog_utils/print.lo volume_io/Prog_utils/print.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/print.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/print.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/print.c -o volume_io/Prog_utils/print.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Prog_utils/progress.lo volume_io/Prog_utils/progress.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/progress.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/progress.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/progress.c -o volume_io/Prog_utils/progress.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Prog_utils/string.lo volume_io/Prog_utils/string.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/string.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/string.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/string.c -o volume_io/Prog_utils/string.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Prog_utils/time.lo volume_io/Prog_utils/time.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/time.c -fPIC -DPIC -o volume_io/Prog_utils/.libs/time.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Prog_utils/time.c -o volume_io/Prog_utils/time.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Volumes/evaluate.lo volume_io/Volumes/evaluate.c mkdir volume_io/Volumes/.libs cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/evaluate.c -fPIC -DPIC -o volume_io/Volumes/.libs/evaluate.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/evaluate.c -o volume_io/Volumes/evaluate.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Volumes/get_hyperslab.lo volume_io/Volumes/get_hyperslab.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/get_hyperslab.c -fPIC -DPIC -o volume_io/Volumes/.libs/get_hyperslab.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/get_hyperslab.c -o volume_io/Volumes/get_hyperslab.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Volumes/input_free.lo volume_io/Volumes/input_free.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/input_free.c -fPIC -DPIC -o volume_io/Volumes/.libs/input_free.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/input_free.c -o volume_io/Volumes/input_free.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Volumes/input_mnc.lo volume_io/Volumes/input_mnc.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/input_mnc.c -fPIC -DPIC -o volume_io/Volumes/.libs/input_mnc.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/input_mnc.c -o volume_io/Volumes/input_mnc.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Volumes/input_volume.lo volume_io/Volumes/input_volume.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/input_volume.c -fPIC -DPIC -o volume_io/Volumes/.libs/input_volume.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/input_volume.c -o volume_io/Volumes/input_volume.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Volumes/multidim_arrays.lo volume_io/Volumes/multidim_arrays.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/multidim_arrays.c -fPIC -DPIC -o volume_io/Volumes/.libs/multidim_arrays.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/multidim_arrays.c -o volume_io/Volumes/multidim_arrays.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Volumes/output_mnc.lo volume_io/Volumes/output_mnc.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/output_mnc.c -fPIC -DPIC -o volume_io/Volumes/.libs/output_mnc.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/output_mnc.c -o volume_io/Volumes/output_mnc.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Volumes/output_volume.lo volume_io/Volumes/output_volume.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/output_volume.c -fPIC -DPIC -o volume_io/Volumes/.libs/output_volume.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/output_volume.c -o volume_io/Volumes/output_volume.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Volumes/set_hyperslab.lo volume_io/Volumes/set_hyperslab.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/set_hyperslab.c -fPIC -DPIC -o volume_io/Volumes/.libs/set_hyperslab.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/set_hyperslab.c -o volume_io/Volumes/set_hyperslab.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Volumes/volume_cache.lo volume_io/Volumes/volume_cache.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/volume_cache.c -fPIC -DPIC -o volume_io/Volumes/.libs/volume_cache.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/volume_cache.c -o volume_io/Volumes/volume_cache.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o volume_io/Volumes/volumes.lo volume_io/Volumes/volumes.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/volumes.c -fPIC -DPIC -o volume_io/Volumes/.libs/volumes.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c volume_io/Volumes/volumes.c -o volume_io/Volumes/volumes.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -version-info 2:1:1 -Wl,-Bsymbolic-functions -o libvolume_io2.la -rpath /usr/lib volume_io/Geometry/colour.lo volume_io/Geometry/colour_def.lo volume_io/Geometry/gaussian.lo volume_io/Geometry/inverse.lo volume_io/Geometry/newton.lo volume_io/Geometry/points.lo volume_io/Geometry/splines.lo volume_io/Geometry/tensors.lo volume_io/Geometry/transforms.lo volume_io/MNI_formats/gen_xf_io.lo volume_io/MNI_formats/gen_xfs.lo volume_io/MNI_formats/grid_transforms.lo volume_io/MNI_formats/mni_io.lo volume_io/MNI_formats/tag_points.lo volume_io/MNI_formats/thin_plate_spline.lo volume_io/Prog_utils/alloc.lo volume_io/Prog_utils/alloc_check.lo volume_io/Prog_utils/arrays.lo volume_io/Prog_utils/files.lo volume_io/Prog_utils/print.lo volume_io/Prog_utils/progress.lo volume_io/Prog_utils/string.lo volume_io/Prog_utils/time.lo volume_io/Volumes/evaluate.lo volume_io/Volumes/get_hyperslab.lo volume_io/Volumes/input_free.lo volume_io/Volumes/input_mnc.lo volume_io/Volumes/input_volume.lo volume_io/Volumes/multidim_arrays.lo volume_io/Volumes/output_mnc.lo volume_io/Volumes/output_volume.lo volume_io/Volumes/set_hyperslab.lo volume_io/Volumes/volume_cache.lo volume_io/Volumes/volumes.lo -lhdf5 -lz -lnetcdf -lm cc -shared volume_io/Geometry/.libs/colour.o volume_io/Geometry/.libs/colour_def.o volume_io/Geometry/.libs/gaussian.o volume_io/Geometry/.libs/inverse.o volume_io/Geometry/.libs/newton.o volume_io/Geometry/.libs/points.o volume_io/Geometry/.libs/splines.o volume_io/Geometry/.libs/tensors.o volume_io/Geometry/.libs/transforms.o volume_io/MNI_formats/.libs/gen_xf_io.o volume_io/MNI_formats/.libs/gen_xfs.o volume_io/MNI_formats/.libs/grid_transforms.o volume_io/MNI_formats/.libs/mni_io.o volume_io/MNI_formats/.libs/tag_points.o volume_io/MNI_formats/.libs/thin_plate_spline.o volume_io/Prog_utils/.libs/alloc.o volume_io/Prog_utils/.libs/alloc_check.o volume_io/Prog_utils/.libs/arrays.o volume_io/Prog_utils/.libs/files.o volume_io/Prog_utils/.libs/print.o volume_io/Prog_utils/.libs/progress.o volume_io/Prog_utils/.libs/string.o volume_io/Prog_utils/.libs/time.o volume_io/Volumes/.libs/evaluate.o volume_io/Volumes/.libs/get_hyperslab.o volume_io/Volumes/.libs/input_free.o volume_io/Volumes/.libs/input_mnc.o volume_io/Volumes/.libs/input_volume.o volume_io/Volumes/.libs/multidim_arrays.o volume_io/Volumes/.libs/output_mnc.o volume_io/Volumes/.libs/output_volume.o volume_io/Volumes/.libs/set_hyperslab.o volume_io/Volumes/.libs/volume_cache.o volume_io/Volumes/.libs/volumes.o /usr/lib/libhdf5.so -lz -lnetcdf -lm -Wl,-Bsymbolic-functions -Wl,-soname -Wl,libvolume_io2.so.1 -o .libs/libvolume_io2.so.1.1.1 (cd .libs && rm -f libvolume_io2.so.1 && ln -s libvolume_io2.so.1.1.1 libvolume_io2.so.1) (cd .libs && rm -f libvolume_io2.so && ln -s libvolume_io2.so.1.1.1 libvolume_io2.so) ar cru .libs/libvolume_io2.a volume_io/Geometry/colour.o volume_io/Geometry/colour_def.o volume_io/Geometry/gaussian.o volume_io/Geometry/inverse.o volume_io/Geometry/newton.o volume_io/Geometry/points.o volume_io/Geometry/splines.o volume_io/Geometry/tensors.o volume_io/Geometry/transforms.o volume_io/MNI_formats/gen_xf_io.o volume_io/MNI_formats/gen_xfs.o volume_io/MNI_formats/grid_transforms.o volume_io/MNI_formats/mni_io.o volume_io/MNI_formats/tag_points.o volume_io/MNI_formats/thin_plate_spline.o volume_io/Prog_utils/alloc.o volume_io/Prog_utils/alloc_check.o volume_io/Prog_utils/arrays.o volume_io/Prog_utils/files.o volume_io/Prog_utils/print.o volume_io/Prog_utils/progress.o volume_io/Prog_utils/string.o volume_io/Prog_utils/time.o volume_io/Volumes/evaluate.o volume_io/Volumes/get_hyperslab.o volume_io/Volumes/input_free.o volume_io/Volumes/input_mnc.o volume_io/Volumes/input_volume.o volume_io/Volumes/multidim_arrays.o volume_io/Volumes/output_mnc.o volume_io/Volumes/output_volume.o volume_io/Volumes/set_hyperslab.o volume_io/Volumes/volume_cache.o volume_io/Volumes/volumes.o ranlib .libs/libvolume_io2.a creating libvolume_io2.la (cd .libs && rm -f libvolume_io2.la && ln -s ../libvolume_io2.la libvolume_io2.la) /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/acr_io.lo conversion/Acr_nema/acr_io.c mkdir conversion/Acr_nema/.libs cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/acr_io.c -fPIC -DPIC -o conversion/Acr_nema/.libs/acr_io.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/acr_io.c -o conversion/Acr_nema/acr_io.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/dicom_client_routines.lo conversion/Acr_nema/dicom_client_routines.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/dicom_client_routines.c -fPIC -DPIC -o conversion/Acr_nema/.libs/dicom_client_routines.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/dicom_client_routines.c -o conversion/Acr_nema/dicom_client_routines.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/dicom_network.lo conversion/Acr_nema/dicom_network.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/dicom_network.c -fPIC -DPIC -o conversion/Acr_nema/.libs/dicom_network.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/dicom_network.c -o conversion/Acr_nema/dicom_network.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/element.lo conversion/Acr_nema/element.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/element.c -fPIC -DPIC -o conversion/Acr_nema/.libs/element.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/element.c -o conversion/Acr_nema/element.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/file_io.lo conversion/Acr_nema/file_io.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/file_io.c -fPIC -DPIC -o conversion/Acr_nema/.libs/file_io.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/file_io.c -o conversion/Acr_nema/file_io.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/globals.lo conversion/Acr_nema/globals.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/globals.c -fPIC -DPIC -o conversion/Acr_nema/.libs/globals.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/globals.c -o conversion/Acr_nema/globals.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/group.lo conversion/Acr_nema/group.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/group.c -fPIC -DPIC -o conversion/Acr_nema/.libs/group.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/group.c -o conversion/Acr_nema/group.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/message.lo conversion/Acr_nema/message.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/message.c -fPIC -DPIC -o conversion/Acr_nema/.libs/message.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/message.c -o conversion/Acr_nema/message.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/value_repr.lo conversion/Acr_nema/value_repr.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/value_repr.c -fPIC -DPIC -o conversion/Acr_nema/.libs/value_repr.o cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c conversion/Acr_nema/value_repr.c -o conversion/Acr_nema/value_repr.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o libacr_nema.la -rpath /usr/lib conversion/Acr_nema/acr_io.lo conversion/Acr_nema/dicom_client_routines.lo conversion/Acr_nema/dicom_network.lo conversion/Acr_nema/element.lo conversion/Acr_nema/file_io.lo conversion/Acr_nema/globals.lo conversion/Acr_nema/group.lo conversion/Acr_nema/message.lo conversion/Acr_nema/value_repr.lo -lhdf5 -lz -lnetcdf -lm cc -shared conversion/Acr_nema/.libs/acr_io.o conversion/Acr_nema/.libs/dicom_client_routines.o conversion/Acr_nema/.libs/dicom_network.o conversion/Acr_nema/.libs/element.o conversion/Acr_nema/.libs/file_io.o conversion/Acr_nema/.libs/globals.o conversion/Acr_nema/.libs/group.o conversion/Acr_nema/.libs/message.o conversion/Acr_nema/.libs/value_repr.o /usr/lib/libhdf5.so -lz -lnetcdf -lm -Wl,-Bsymbolic-functions -Wl,-soname -Wl,libacr_nema.so.0 -o .libs/libacr_nema.so.0.0.0 (cd .libs && rm -f libacr_nema.so.0 && ln -s libacr_nema.so.0.0.0 libacr_nema.so.0) (cd .libs && rm -f libacr_nema.so && ln -s libacr_nema.so.0.0.0 libacr_nema.so) ar cru .libs/libacr_nema.a conversion/Acr_nema/acr_io.o conversion/Acr_nema/dicom_client_routines.o conversion/Acr_nema/dicom_network.o conversion/Acr_nema/element.o conversion/Acr_nema/file_io.o conversion/Acr_nema/globals.o conversion/Acr_nema/group.o conversion/Acr_nema/message.o conversion/Acr_nema/value_repr.o ranlib .libs/libacr_nema.a creating libacr_nema.la (cd .libs && rm -f libacr_nema.la && ln -s ../libacr_nema.la libacr_nema.la) cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/coordinates/voxeltoworld.o progs/coordinates/voxeltoworld.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o voxeltoworld progs/coordinates/voxeltoworld.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/voxeltoworld progs/coordinates/voxeltoworld.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating voxeltoworld cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/coordinates/worldtovoxel.o progs/coordinates/worldtovoxel.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o worldtovoxel progs/coordinates/worldtovoxel.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/worldtovoxel progs/coordinates/worldtovoxel.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating worldtovoxel cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/minc_modify_header/minc_modify_header.o progs/minc_modify_header/minc_modify_header.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o minc_modify_header progs/minc_modify_header/minc_modify_header.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/minc_modify_header progs/minc_modify_header/minc_modify_header.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating minc_modify_header cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincaverage/mincaverage.o progs/mincaverage/mincaverage.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincaverage progs/mincaverage/mincaverage.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincaverage progs/mincaverage/mincaverage.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincaverage cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -Iprogs/minccalc -I./progs/minccalc -I/usr/include/mpi -c -o progs/minccalc/minccalc-minccalc.o `test -f 'progs/minccalc/minccalc.c' || echo './'`progs/minccalc/minccalc.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -Iprogs/minccalc -I./progs/minccalc -I/usr/include/mpi -c -o progs/minccalc/minccalc-gram.o `test -f 'progs/minccalc/gram.c' || echo './'`progs/minccalc/gram.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -Iprogs/minccalc -I./progs/minccalc -I/usr/include/mpi -c -o progs/minccalc/minccalc-eval.o `test -f 'progs/minccalc/eval.c' || echo './'`progs/minccalc/eval.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -Iprogs/minccalc -I./progs/minccalc -I/usr/include/mpi -c -o progs/minccalc/minccalc-ident.o `test -f 'progs/minccalc/ident.c' || echo './'`progs/minccalc/ident.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -Iprogs/minccalc -I./progs/minccalc -I/usr/include/mpi -c -o progs/minccalc/minccalc-lex.o `test -f 'progs/minccalc/lex.c' || echo './'`progs/minccalc/lex.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -Iprogs/minccalc -I./progs/minccalc -I/usr/include/mpi -c -o progs/minccalc/minccalc-node.o `test -f 'progs/minccalc/node.c' || echo './'`progs/minccalc/node.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -Iprogs/minccalc -I./progs/minccalc -I/usr/include/mpi -c -o progs/minccalc/minccalc-optim.o `test -f 'progs/minccalc/optim.c' || echo './'`progs/minccalc/optim.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -Iprogs/minccalc -I./progs/minccalc -I/usr/include/mpi -c -o progs/minccalc/minccalc-scalar.o `test -f 'progs/minccalc/scalar.c' || echo './'`progs/minccalc/scalar.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -Iprogs/minccalc -I./progs/minccalc -I/usr/include/mpi -c -o progs/minccalc/minccalc-sym.o `test -f 'progs/minccalc/sym.c' || echo './'`progs/minccalc/sym.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -Iprogs/minccalc -I./progs/minccalc -I/usr/include/mpi -c -o progs/minccalc/minccalc-vector.o `test -f 'progs/minccalc/vector.c' || echo './'`progs/minccalc/vector.c /bin/bash ./libtool --tag=CC --mode=link cc -Iprogs/minccalc -I./progs/minccalc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o minccalc progs/minccalc/minccalc-minccalc.o progs/minccalc/minccalc-gram.o progs/minccalc/minccalc-eval.o progs/minccalc/minccalc-ident.o progs/minccalc/minccalc-lex.o progs/minccalc/minccalc-node.o progs/minccalc/minccalc-optim.o progs/minccalc/minccalc-scalar.o progs/minccalc/minccalc-sym.o progs/minccalc/minccalc-vector.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -Iprogs/minccalc -I./progs/minccalc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/minccalc progs/minccalc/minccalc-minccalc.o progs/minccalc/minccalc-gram.o progs/minccalc/minccalc-eval.o progs/minccalc/minccalc-ident.o progs/minccalc/minccalc-lex.o progs/minccalc/minccalc-node.o progs/minccalc/minccalc-optim.o progs/minccalc/minccalc-scalar.o progs/minccalc/minccalc-sym.o progs/minccalc/minccalc-vector.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating minccalc cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincconcat/mincconcat.o progs/mincconcat/mincconcat.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincconcat progs/mincconcat/mincconcat.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincconcat progs/mincconcat/mincconcat.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincconcat cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/minccopy/minccopy.o progs/minccopy/minccopy.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o minccopy progs/minccopy/minccopy.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/minccopy progs/minccopy/minccopy.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating minccopy cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincexpand/mincexpand.o progs/mincexpand/mincexpand.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincexpand progs/mincexpand/mincexpand.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincexpand progs/mincexpand/mincexpand.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincexpand cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincextract/mincextract.o progs/mincextract/mincextract.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincextract progs/mincextract/mincextract.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincextract progs/mincextract/mincextract.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincextract cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincgen/escapes.o progs/mincgen/escapes.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincgen/genlib.o progs/mincgen/genlib.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincgen/getfill.o progs/mincgen/getfill.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincgen/init.o progs/mincgen/init.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincgen/load.o progs/mincgen/load.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincgen/main.o progs/mincgen/main.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincgen/ncgentab.o progs/mincgen/ncgentab.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincgen/ncgenyy.o progs/mincgen/ncgenyy.c ncgenyy.l: In function 'yylex': ncgenyy.l:131: warning: cast from pointer to integer of different size /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincgen progs/mincgen/escapes.o progs/mincgen/genlib.o progs/mincgen/getfill.o progs/mincgen/init.o progs/mincgen/load.o progs/mincgen/main.o progs/mincgen/ncgentab.o progs/mincgen/ncgenyy.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincgen progs/mincgen/escapes.o progs/mincgen/genlib.o progs/mincgen/getfill.o progs/mincgen/init.o progs/mincgen/load.o progs/mincgen/main.o progs/mincgen/ncgentab.o progs/mincgen/ncgenyy.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincgen cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincinfo/mincinfo.o progs/mincinfo/mincinfo.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincinfo progs/mincinfo/mincinfo.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincinfo progs/mincinfo/mincinfo.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincinfo cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/minclookup/minclookup.o progs/minclookup/minclookup.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o minclookup progs/minclookup/minclookup.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/minclookup progs/minclookup/minclookup.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating minclookup cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincmakescalar/mincmakescalar.o progs/mincmakescalar/mincmakescalar.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincmakescalar progs/mincmakescalar/mincmakescalar.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincmakescalar progs/mincmakescalar/mincmakescalar.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincmakescalar cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincmakevector/mincmakevector.o progs/mincmakevector/mincmakevector.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincmakevector progs/mincmakevector/mincmakevector.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincmakevector progs/mincmakevector/mincmakevector.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincmakevector cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincmath/mincmath.o progs/mincmath/mincmath.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincmath progs/mincmath/mincmath.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincmath progs/mincmath/mincmath.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincmath cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincresample/mincresample.o progs/mincresample/mincresample.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincresample/resample_volumes.o progs/mincresample/resample_volumes.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/Proglib/convert_origin_to_start.o progs/Proglib/convert_origin_to_start.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincresample progs/mincresample/mincresample.o progs/mincresample/resample_volumes.o progs/Proglib/convert_origin_to_start.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincresample progs/mincresample/mincresample.o progs/mincresample/resample_volumes.o progs/Proglib/convert_origin_to_start.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincresample cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincreshape/mincreshape.o progs/mincreshape/mincreshape.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincreshape/copy_data.o progs/mincreshape/copy_data.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincreshape progs/mincreshape/mincreshape.o progs/mincreshape/copy_data.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincreshape progs/mincreshape/mincreshape.o progs/mincreshape/copy_data.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincreshape cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincstats/mincstats.o progs/mincstats/mincstats.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincstats progs/mincstats/mincstats.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincstats progs/mincstats/mincstats.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincstats cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/minctoraw/minctoraw.o progs/minctoraw/minctoraw.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o minctoraw progs/minctoraw/minctoraw.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/minctoraw progs/minctoraw/minctoraw.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating minctoraw cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincview/invert_raw_image.o progs/mincview/invert_raw_image.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o invert_raw_image progs/mincview/invert_raw_image.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/invert_raw_image progs/mincview/invert_raw_image.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating invert_raw_image cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincwindow/mincwindow.o progs/mincwindow/mincwindow.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincwindow progs/mincwindow/mincwindow.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincwindow progs/mincwindow/mincwindow.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincwindow cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/rawtominc/rawtominc.o progs/rawtominc/rawtominc.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o rawtominc progs/rawtominc/rawtominc.o progs/Proglib/convert_origin_to_start.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/rawtominc progs/rawtominc/rawtominc.o progs/Proglib/convert_origin_to_start.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating rawtominc cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/xfm/transformtags.o progs/xfm/transformtags.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o transformtags progs/xfm/transformtags.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/transformtags progs/xfm/transformtags.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating transformtags cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/xfm/xfmconcat.o progs/xfm/xfmconcat.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o xfmconcat progs/xfm/xfmconcat.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/xfmconcat progs/xfm/xfmconcat.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating xfmconcat cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/xfm/xfminvert.o progs/xfm/xfminvert.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o xfminvert progs/xfm/xfminvert.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/xfminvert progs/xfm/xfminvert.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating xfminvert cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincconvert/mincconvert.o progs/mincconvert/mincconvert.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincconvert progs/mincconvert/mincconvert.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincconvert progs/mincconvert/mincconvert.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincconvert cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincdump/mincdump.o progs/mincdump/mincdump.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincdump/vardata.o progs/mincdump/vardata.c progs/mincdump/vardata.c: In function 'pr_bvals': progs/mincdump/vardata.c:462: warning: format not a string literal and no format arguments progs/mincdump/vardata.c:472: warning: format not a string literal and no format arguments progs/mincdump/vardata.c: In function 'pr_svals': progs/mincdump/vardata.c:510: warning: format not a string literal and no format arguments progs/mincdump/vardata.c:520: warning: format not a string literal and no format arguments progs/mincdump/vardata.c: In function 'pr_ivals': progs/mincdump/vardata.c:560: warning: format not a string literal and no format arguments progs/mincdump/vardata.c:570: warning: format not a string literal and no format arguments progs/mincdump/vardata.c: In function 'pr_fvals': progs/mincdump/vardata.c:608: warning: format not a string literal and no format arguments progs/mincdump/vardata.c:618: warning: format not a string literal and no format arguments progs/mincdump/vardata.c: In function 'pr_dvals': progs/mincdump/vardata.c:656: warning: format not a string literal and no format arguments progs/mincdump/vardata.c:666: warning: format not a string literal and no format arguments cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincdump/dumplib.o progs/mincdump/dumplib.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincdump progs/mincdump/mincdump.o progs/mincdump/vardata.o progs/mincdump/dumplib.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincdump progs/mincdump/mincdump.o progs/mincdump/vardata.o progs/mincdump/dumplib.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincdump cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/ecattominc/ecattominc.o conversion/ecattominc/ecattominc.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/ecattominc/insertblood.o conversion/ecattominc/insertblood.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/ecattominc/ecat_file.o conversion/ecattominc/ecat_file.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/ecattominc/machine_indep.o conversion/ecattominc/machine_indep.c conversion/ecattominc/machine_indep.c: In function 'get_short_value': conversion/ecattominc/machine_indep.c:17: warning: incompatible implicit declaration of built-in function 'memcpy' conversion/ecattominc/machine_indep.c: In function 'get_long_value': conversion/ecattominc/machine_indep.c:24: warning: incompatible implicit declaration of built-in function 'memcpy' /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o ecattominc conversion/ecattominc/ecattominc.o conversion/ecattominc/insertblood.o conversion/ecattominc/ecat_file.o conversion/ecattominc/machine_indep.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/ecattominc conversion/ecattominc/ecattominc.o conversion/ecattominc/insertblood.o conversion/ecattominc/ecat_file.o conversion/ecattominc/machine_indep.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating ecattominc cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/minctoecat/minctoecat.o conversion/minctoecat/minctoecat.c conversion/minctoecat/minctoecat.c: In function 'main': conversion/minctoecat/minctoecat.c:148: warning: too few arguments for format cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/minctoecat/ecat_write.o conversion/minctoecat/ecat_write.c conversion/minctoecat/ecat_write.c: In function 'matrix_create': conversion/minctoecat/ecat_write.c:72: warning: incompatible implicit declaration of built-in function 'strlen' conversion/minctoecat/ecat_write.c:79: warning: incompatible implicit declaration of built-in function 'strcpy' conversion/minctoecat/ecat_write.c:88: warning: incompatible implicit declaration of built-in function 'memcpy' conversion/minctoecat/ecat_write.c: In function 'mat_create': conversion/minctoecat/ecat_write.c:112: warning: incompatible implicit declaration of built-in function 'memset' conversion/minctoecat/ecat_write.c: In function 'matrix_close': conversion/minctoecat/ecat_write.c:572: warning: incompatible implicit declaration of built-in function 'strcpy' cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/minctoecat/machine_indep.o conversion/minctoecat/machine_indep.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o minctoecat conversion/minctoecat/minctoecat.o conversion/minctoecat/ecat_write.o conversion/minctoecat/machine_indep.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/minctoecat conversion/minctoecat/minctoecat.o conversion/minctoecat/ecat_write.o conversion/minctoecat/machine_indep.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating minctoecat cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/nifti1/mnc2nii.o conversion/nifti1/mnc2nii.c conversion/nifti1/mnc2nii.c: In function 'main': conversion/nifti1/mnc2nii.c:638: warning: format '%ld' expects type 'long int', but argument 2 has type 'int' cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/nifti1/nifti1_io.o conversion/nifti1/nifti1_io.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/nifti1/znzlib.o conversion/nifti1/znzlib.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mnc2nii conversion/nifti1/mnc2nii.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mnc2nii conversion/nifti1/mnc2nii.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mnc2nii cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/nifti1/nii2mnc.o conversion/nifti1/nii2mnc.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o nii2mnc conversion/nifti1/nii2mnc.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/nii2mnc conversion/nifti1/nii2mnc.o conversion/nifti1/nifti1_io.o conversion/nifti1/znzlib.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating nii2mnc cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/micropet/upet2mnc.o conversion/micropet/upet2mnc.c conversion/micropet/upet2mnc.c: In function 'message': conversion/micropet/upet2mnc.c:453: warning: format not a string literal and no format arguments conversion/micropet/upet2mnc.c:458: warning: format not a string literal and no format arguments /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o upet2mnc conversion/micropet/upet2mnc.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/upet2mnc conversion/micropet/upet2mnc.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating upet2mnc cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/dcm2mnc/dcm2mnc.o conversion/dcm2mnc/dcm2mnc.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/dcm2mnc/dicom_to_minc.o conversion/dcm2mnc/dicom_to_minc.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/dcm2mnc/siemens_to_dicom.o conversion/dcm2mnc/siemens_to_dicom.c conversion/dcm2mnc/siemens_to_dicom.c: In function 'create_window_t_element': conversion/dcm2mnc/siemens_to_dicom.c:795: warning: format '%ld' expects type 'long int', but argument 3 has type 'double' conversion/dcm2mnc/siemens_to_dicom.c:795: warning: format '%ld' expects type 'long int', but argument 4 has type 'double' cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/dcm2mnc/dicom_read.o conversion/dcm2mnc/dicom_read.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/dcm2mnc/minc_file.o conversion/dcm2mnc/minc_file.c conversion/dcm2mnc/minc_file.c: In function 'save_minc_image': conversion/dcm2mnc/minc_file.c:1307: warning: format '%d' expects type 'int', but argument 2 has type 'long int' conversion/dcm2mnc/minc_file.c:1307: warning: format '%d' expects type 'int', but argument 3 has type 'long int' conversion/dcm2mnc/minc_file.c:1307: warning: format '%d' expects type 'int', but argument 4 has type 'long int' cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/dcm2mnc/progress.o conversion/dcm2mnc/progress.c cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/dcm2mnc/string_to_filename.o conversion/dcm2mnc/string_to_filename.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o dcm2mnc conversion/dcm2mnc/dcm2mnc.o conversion/dcm2mnc/dicom_to_minc.o conversion/dcm2mnc/siemens_to_dicom.o conversion/dcm2mnc/dicom_read.o conversion/dcm2mnc/minc_file.o conversion/dcm2mnc/progress.o conversion/dcm2mnc/string_to_filename.o libacr_nema.la libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/dcm2mnc conversion/dcm2mnc/dcm2mnc.o conversion/dcm2mnc/dicom_to_minc.o conversion/dcm2mnc/siemens_to_dicom.o conversion/dcm2mnc/dicom_read.o conversion/dcm2mnc/minc_file.o conversion/dcm2mnc/progress.o conversion/dcm2mnc/string_to_filename.o ./.libs/libacr_nema.so ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating dcm2mnc cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/vff2mnc/vff2mnc.o conversion/vff2mnc/vff2mnc.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o vff2mnc conversion/vff2mnc/vff2mnc.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/vff2mnc conversion/vff2mnc/vff2mnc.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating vff2mnc cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/acr_test.o conversion/Acr_nema/acr_test.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o acr_test conversion/Acr_nema/acr_test.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/acr_test conversion/Acr_nema/acr_test.o ./.libs/libacr_nema.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating acr_test cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/dump_acr_nema.o conversion/Acr_nema/dump_acr_nema.c conversion/Acr_nema/dump_acr_nema.c: In function 'main': conversion/Acr_nema/dump_acr_nema.c:215: warning: assignment from incompatible pointer type /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o dump_acr_nema conversion/Acr_nema/dump_acr_nema.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/dump_acr_nema conversion/Acr_nema/dump_acr_nema.o ./.libs/libacr_nema.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating dump_acr_nema cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/extract_acr_nema.o conversion/Acr_nema/extract_acr_nema.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o extract_acr_nema conversion/Acr_nema/extract_acr_nema.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/extract_acr_nema conversion/Acr_nema/extract_acr_nema.o ./.libs/libacr_nema.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating extract_acr_nema cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/read_acr_nema.o conversion/Acr_nema/read_acr_nema.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o read_acr_nema conversion/Acr_nema/read_acr_nema.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/read_acr_nema conversion/Acr_nema/read_acr_nema.o ./.libs/libacr_nema.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating read_acr_nema cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/dicom_test.o conversion/Acr_nema/dicom_test.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o dicom_test conversion/Acr_nema/dicom_test.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/dicom_test conversion/Acr_nema/dicom_test.o ./.libs/libacr_nema.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating dicom_test cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/Acr_nema/copy_acr_nema.o conversion/Acr_nema/copy_acr_nema.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o copy_acr_nema conversion/Acr_nema/copy_acr_nema.o libacr_nema.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/copy_acr_nema conversion/Acr_nema/copy_acr_nema.o ./.libs/libacr_nema.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating copy_acr_nema cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/image_filters/byte_swap.o conversion/image_filters/byte_swap.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o byte_swap conversion/image_filters/byte_swap.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/byte_swap conversion/image_filters/byte_swap.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating byte_swap cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o conversion/image_filters/extract.o conversion/image_filters/extract.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o extract conversion/image_filters/extract.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/extract conversion/image_filters/extract.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating extract cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincexample/mincexample1.o progs/mincexample/mincexample1.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincexample1 progs/mincexample/mincexample1.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincexample1 progs/mincexample/mincexample1.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincexample1 cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/include/mpi -c -o progs/mincexample/mincexample2.o progs/mincexample/mincexample2.c /bin/bash ./libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o mincexample2 progs/mincexample/mincexample2.o libvolume_io2.la libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/mincexample2 progs/mincexample/mincexample2.o ./.libs/libvolume_io2.so ./.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating mincexample2 make[3]: Leaving directory `/build/buildd/minc-2.0.16' Making all in volume_io make[3]: Entering directory `/build/buildd/minc-2.0.16/volume_io' Making all in Documentation make[4]: Entering directory `/build/buildd/minc-2.0.16/volume_io/Documentation' make[4]: Nothing to be done for `all'. make[4]: Leaving directory `/build/buildd/minc-2.0.16/volume_io/Documentation' Making all in Testing make[4]: Entering directory `/build/buildd/minc-2.0.16/volume_io/Testing' cc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib -I/usr/include/mpi -c example_modify.c /bin/bash ../../libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o example_modify example_modify.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm mkdir .libs cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/example_modify example_modify.o ../../.libs/libvolume_io2.so ../../.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating example_modify cc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib -I/usr/include/mpi -c example_tags.c /bin/bash ../../libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o example_tags example_tags.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/example_tags example_tags.o ../../.libs/libvolume_io2.so ../../.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating example_tags cc -DHAVE_CONFIG_H -I. -I../.. -I../../libsrc -I../../volume_io/Include -I../../volume_io/Include -I../../progs/Proglib -I/usr/include/mpi -c example_volume_io.c /bin/bash ../../libtool --tag=CC --mode=link cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o example_volume_io example_volume_io.o ../../libvolume_io2.la ../../libminc2.la -lhdf5 -lz -lnetcdf -lm cc -I/usr/include/mpi -Wl,-Bsymbolic-functions -o .libs/example_volume_io example_volume_io.o ../../.libs/libvolume_io2.so ../../.libs/libminc2.so /usr/lib/libhdf5.so -lz -lnetcdf -lm creating example_volume_io make[4]: Leaving directory `/build/buildd/minc-2.0.16/volume_io/Testing' make[4]: Entering directory `/build/buildd/minc-2.0.16/volume_io' make[4]: Nothing to be done for `all-am'. make[4]: Leaving directory `/build/buildd/minc-2.0.16/volume_io' make[3]: Leaving directory `/build/buildd/minc-2.0.16/volume_io' Making all in testdir make[3]: Entering directory `/build/buildd/minc-2.0.16/testdir' cd . && chmod +x run_tests.sh run_test2.sh xfmconcat_01.sh xfmconcat_02.sh make[3]: Leaving directory `/build/buildd/minc-2.0.16/testdir' Making all in doc make[3]: Entering directory `/build/buildd/minc-2.0.16/doc' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/build/buildd/minc-2.0.16/doc' Making all in libsrc2 make[3]: Entering directory `/build/buildd/minc-2.0.16/libsrc2' Making all in test make[4]: Entering directory `/build/buildd/minc-2.0.16/libsrc2/test' cd . && chmod +x testminctools.sh make[4]: Leaving directory `/build/buildd/minc-2.0.16/libsrc2/test' make[4]: Entering directory `/build/buildd/minc-2.0.16/libsrc2' make[4]: Nothing to be done for `all-am'. make[4]: Leaving directory `/build/buildd/minc-2.0.16/libsrc2' make[3]: Leaving directory `/build/buildd/minc-2.0.16/libsrc2' make[2]: Leaving directory `/build/buildd/minc-2.0.16' make[1]: Leaving directory `/build/buildd/minc-2.0.16' touch debian/stamp-makefile-build DEB_MAKE_CHECK_TARGET unset, not running checks /usr/bin/make -C doc docs make[1]: Entering directory `/build/buildd/minc-2.0.16/doc' latex prog_ref.tex This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./prog_ref.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) No file prog_ref.aux. No file prog_ref.toc. [1] [2] [3] [4] [5] [6] (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] (./prog_ref.aux) ) Output written on prog_ref.dvi (18 pages, 57980 bytes). Transcript written on prog_ref.log. latex prog_ref.tex This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./prog_ref.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (./prog_ref.aux) (./prog_ref.toc) [1] [2] [3] [4] [5] [6] (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] (./prog_ref.aux) ) Output written on prog_ref.dvi (18 pages, 64764 bytes). Transcript written on prog_ref.log. dvips prog_ref.dvi -o prog_ref.ps This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2009.01.12:1515' -> prog_ref.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] latex prog_guide.tex This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./prog_guide.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) No file prog_guide.aux. No file prog_guide.toc. [1] [2] [3] [4] [5] (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [6] [7] [8] [9] [10] [11] [12] (./prog_guide.aux) ) Output written on prog_guide.dvi (12 pages, 42568 bytes). Transcript written on prog_guide.log. latex prog_guide.tex This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./prog_guide.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/article.cls Document Class: article 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (./prog_guide.aux) (./prog_guide.toc) [1] [2] [3] [4] [5] (/usr/share/texmf-texlive/tex/latex/base/omscmr.fd) [6] [7] [8] [9] [10] [11] [12] (./prog_guide.aux) ) Output written on prog_guide.dvi (12 pages, 50236 bytes). Transcript written on prog_guide.log. dvips prog_guide.dvi -o prog_guide.ps This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2009.01.12:1515' -> prog_guide.ps . [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] make[1]: Leaving directory `/build/buildd/minc-2.0.16/doc' /usr/bin/make -C volume_io/Documentation docs make[1]: Entering directory `/build/buildd/minc-2.0.16/volume_io/Documentation' latex volume_io.tex This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./volume_io.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/latex209.def Entering LaTeX 2.09 COMPATIBILITY MODE ************************************************************* !!WARNING!! !!WARNING!! !!WARNING!! !!WARNING!! This mode attempts to provide an emulation of the LaTeX 2.09 author environment so that OLD documents can be successfully processed. It should NOT be used for NEW documents! New documents should use Standard LaTeX conventions and start with the \documentclass command. Compatibility mode is UNLIKELY TO WORK with LaTeX 2.09 style files that change any internal macros, especially not with those that change the FONT SELECTION or OUTPUT ROUTINES. Therefore such style files MUST BE UPDATED to use Current Standard LaTeX: LaTeX2e. If you suspect that you may be using such a style file, which is probably very, very old by now, then you should attempt to get it updated by sending a copy of this error message to the author of that file. ************************************************************* (/usr/share/texmf-texlive/tex/latex/base/tracefnt.sty) (/usr/share/texmf-texlive/tex/latex/base/latexsym.sty)) (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) No file volume_io.aux. (/usr/share/texmf-texlive/tex/latex/base/ulasy.fd) [0] No file volume_io.toc. [1] Chapter 1. [2] Chapter 2. [3] Chapter 3. [4] [5] Chapter 4. [6] [7] [8] [9] Chapter 5. [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] Chapter 6. [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] Chapter 7. [51] [52] [53] [54] [55] [56] Chapter 8. [57] [58] [59] [60] [61] [62] [63] Chapter 9. [64] [65] [66] (./volume_io.aux) ) Output written on volume_io.dvi (67 pages, 138136 bytes). Transcript written on volume_io.log. latex volume_io.tex This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./volume_io.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, loaded. (/usr/share/texmf-texlive/tex/latex/base/latex209.def Entering LaTeX 2.09 COMPATIBILITY MODE ************************************************************* !!WARNING!! !!WARNING!! !!WARNING!! !!WARNING!! This mode attempts to provide an emulation of the LaTeX 2.09 author environment so that OLD documents can be successfully processed. It should NOT be used for NEW documents! New documents should use Standard LaTeX conventions and start with the \documentclass command. Compatibility mode is UNLIKELY TO WORK with LaTeX 2.09 style files that change any internal macros, especially not with those that change the FONT SELECTION or OUTPUT ROUTINES. Therefore such style files MUST BE UPDATED to use Current Standard LaTeX: LaTeX2e. If you suspect that you may be using such a style file, which is probably very, very old by now, then you should attempt to get it updated by sending a copy of this error message to the author of that file. ************************************************************* (/usr/share/texmf-texlive/tex/latex/base/tracefnt.sty) (/usr/share/texmf-texlive/tex/latex/base/latexsym.sty)) (/usr/share/texmf-texlive/tex/latex/base/report.cls Document Class: report 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-texlive/tex/latex/base/size10.clo)) (./volume_io.aux) (/usr/share/texmf-texlive/tex/latex/base/ulasy.fd) [0] (./volume_io.toc [1]) [2] Chapter 1. [3] Chapter 2. [4] Chapter 3. [5] [6] Chapter 4. [7] [8] [9] [10] Chapter 5. [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6. [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] Chapter 7. [52] [53] [54] [55] [56] [57] Chapter 8. [58] [59] [60] [61] [62] [63] [64] Chapter 9. [65] [66] [67] (./volume_io.aux) ) Output written on volume_io.dvi (68 pages, 146960 bytes). Transcript written on volume_io.log. dvips volume_io.dvi -o volume_io.ps This is dvips(k) 5.96.1 Copyright 2007 Radical Eye Software (www.radicaleye.com) ' TeX output 2009.01.12:1515' -> volume_io.ps . [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] [63] [64] [65] [66] [67] make[1]: Leaving directory `/build/buildd/minc-2.0.16/volume_io/Documentation' /usr/bin/fakeroot debian/rules binary-arch dh_testroot dh_clean -k dh_installdirs -A mkdir -p "." if test -e /usr/share/misc/config.guess ; then \ for i in ./ac_config_aux/config.guess ; do \ if ! test -e $i.cdbs-orig ; then \ mv $i $i.cdbs-orig ; \ cp --remove-destination /usr/share/misc/config.guess $i ; \ fi ; \ done ; \ fi if test -e /usr/share/misc/config.sub ; then \ for i in ./ac_config_aux/config.sub ; do \ if ! test -e $i.cdbs-orig ; then \ mv $i $i.cdbs-orig ; \ cp --remove-destination /usr/share/misc/config.sub $i ; \ fi ; \ done ; \ fi DEB_MAKE_CHECK_TARGET unset, not running checks /usr/bin/make -C . install DESTDIR=/build/buildd/minc-2.0.16/debian/tmp/ make[1]: Entering directory `/build/buildd/minc-2.0.16' Making install in . make[2]: Entering directory `/build/buildd/minc-2.0.16' make[3]: Entering directory `/build/buildd/minc-2.0.16' test -z "/usr/lib" || /bin/mkdir -p "/build/buildd/minc-2.0.16/debian/tmp//usr/lib" /bin/bash ./libtool --mode=install /usr/bin/install -c 'libminc2.la' '/build/buildd/minc-2.0.16/debian/tmp//usr/lib/libminc2.la' /usr/bin/install -c .libs/libminc2.so.1.1.1 /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libminc2.so.1.1.1 (cd /build/buildd/minc-2.0.16/debian/tmp//usr/lib && { ln -s -f libminc2.so.1.1.1 libminc2.so.1 || { rm -f libminc2.so.1 && ln -s libminc2.so.1.1.1 libminc2.so.1; }; }) (cd /build/buildd/minc-2.0.16/debian/tmp//usr/lib && { ln -s -f libminc2.so.1.1.1 libminc2.so || { rm -f libminc2.so && ln -s libminc2.so.1.1.1 libminc2.so; }; }) /usr/bin/install -c .libs/libminc2.lai /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libminc2.la /usr/bin/install -c .libs/libminc2.a /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libminc2.a chmod 644 /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libminc2.a ranlib /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libminc2.a libtool: install: warning: remember to run `libtool --finish /usr/lib' /bin/bash ./libtool --mode=install /usr/bin/install -c 'libvolume_io2.la' '/build/buildd/minc-2.0.16/debian/tmp//usr/lib/libvolume_io2.la' /usr/bin/install -c .libs/libvolume_io2.so.1.1.1 /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libvolume_io2.so.1.1.1 (cd /build/buildd/minc-2.0.16/debian/tmp//usr/lib && { ln -s -f libvolume_io2.so.1.1.1 libvolume_io2.so.1 || { rm -f libvolume_io2.so.1 && ln -s libvolume_io2.so.1.1.1 libvolume_io2.so.1; }; }) (cd /build/buildd/minc-2.0.16/debian/tmp//usr/lib && { ln -s -f libvolume_io2.so.1.1.1 libvolume_io2.so || { rm -f libvolume_io2.so && ln -s libvolume_io2.so.1.1.1 libvolume_io2.so; }; }) /usr/bin/install -c .libs/libvolume_io2.lai /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libvolume_io2.la /usr/bin/install -c .libs/libvolume_io2.a /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libvolume_io2.a chmod 644 /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libvolume_io2.a ranlib /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libvolume_io2.a libtool: install: warning: remember to run `libtool --finish /usr/lib' /bin/bash ./libtool --mode=install /usr/bin/install -c 'libacr_nema.la' '/build/buildd/minc-2.0.16/debian/tmp//usr/lib/libacr_nema.la' /usr/bin/install -c .libs/libacr_nema.so.0.0.0 /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libacr_nema.so.0.0.0 (cd /build/buildd/minc-2.0.16/debian/tmp//usr/lib && { ln -s -f libacr_nema.so.0.0.0 libacr_nema.so.0 || { rm -f libacr_nema.so.0 && ln -s libacr_nema.so.0.0.0 libacr_nema.so.0; }; }) (cd /build/buildd/minc-2.0.16/debian/tmp//usr/lib && { ln -s -f libacr_nema.so.0.0.0 libacr_nema.so || { rm -f libacr_nema.so && ln -s libacr_nema.so.0.0.0 libacr_nema.so; }; }) /usr/bin/install -c .libs/libacr_nema.lai /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libacr_nema.la /usr/bin/install -c .libs/libacr_nema.a /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libacr_nema.a chmod 644 /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libacr_nema.a ranlib /build/buildd/minc-2.0.16/debian/tmp//usr/lib/libacr_nema.a libtool: install: warning: remember to run `libtool --finish /usr/lib' test -z "/usr/bin" || /bin/mkdir -p "/build/buildd/minc-2.0.16/debian/tmp//usr/bin" /bin/bash ./libtool --mode=install /usr/bin/install -c 'voxeltoworld' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/voxeltoworld' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/voxeltoworld /build/buildd/minc-2.0.16/debian/tmp//usr/bin/voxeltoworld /bin/bash ./libtool --mode=install /usr/bin/install -c 'worldtovoxel' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/worldtovoxel' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/worldtovoxel /build/buildd/minc-2.0.16/debian/tmp//usr/bin/worldtovoxel /bin/bash ./libtool --mode=install /usr/bin/install -c 'minc_modify_header' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/minc_modify_header' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/minc_modify_header /build/buildd/minc-2.0.16/debian/tmp//usr/bin/minc_modify_header /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincaverage' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincaverage' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincaverage /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincaverage /bin/bash ./libtool --mode=install /usr/bin/install -c 'minccalc' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/minccalc' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/minccalc /build/buildd/minc-2.0.16/debian/tmp//usr/bin/minccalc /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincconcat' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincconcat' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincconcat /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincconcat /bin/bash ./libtool --mode=install /usr/bin/install -c 'minccopy' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/minccopy' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/minccopy /build/buildd/minc-2.0.16/debian/tmp//usr/bin/minccopy /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincexpand' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincexpand' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincexpand /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincexpand /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincextract' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincextract' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincextract /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincextract /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincgen' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincgen' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincgen /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincgen /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincinfo' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincinfo' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincinfo /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincinfo /bin/bash ./libtool --mode=install /usr/bin/install -c 'minclookup' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/minclookup' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/minclookup /build/buildd/minc-2.0.16/debian/tmp//usr/bin/minclookup /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincmakescalar' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincmakescalar' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincmakescalar /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincmakescalar /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincmakevector' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincmakevector' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincmakevector /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincmakevector /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincmath' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincmath' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincmath /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincmath /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincresample' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincresample' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincresample /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincresample /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincreshape' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincreshape' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincreshape /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincreshape /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincstats' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincstats' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincstats /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincstats /bin/bash ./libtool --mode=install /usr/bin/install -c 'minctoraw' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/minctoraw' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/minctoraw /build/buildd/minc-2.0.16/debian/tmp//usr/bin/minctoraw /bin/bash ./libtool --mode=install /usr/bin/install -c 'invert_raw_image' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/invert_raw_image' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/invert_raw_image /build/buildd/minc-2.0.16/debian/tmp//usr/bin/invert_raw_image /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincwindow' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincwindow' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincwindow /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincwindow /bin/bash ./libtool --mode=install /usr/bin/install -c 'rawtominc' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/rawtominc' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/rawtominc /build/buildd/minc-2.0.16/debian/tmp//usr/bin/rawtominc /bin/bash ./libtool --mode=install /usr/bin/install -c 'transformtags' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/transformtags' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/transformtags /build/buildd/minc-2.0.16/debian/tmp//usr/bin/transformtags /bin/bash ./libtool --mode=install /usr/bin/install -c 'xfmconcat' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/xfmconcat' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/xfmconcat /build/buildd/minc-2.0.16/debian/tmp//usr/bin/xfmconcat /bin/bash ./libtool --mode=install /usr/bin/install -c 'xfminvert' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/xfminvert' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/xfminvert /build/buildd/minc-2.0.16/debian/tmp//usr/bin/xfminvert /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincconvert' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincconvert' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincconvert /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincconvert /bin/bash ./libtool --mode=install /usr/bin/install -c 'mincdump' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincdump' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mincdump /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincdump /bin/bash ./libtool --mode=install /usr/bin/install -c 'ecattominc' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/ecattominc' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/ecattominc /build/buildd/minc-2.0.16/debian/tmp//usr/bin/ecattominc /bin/bash ./libtool --mode=install /usr/bin/install -c 'minctoecat' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/minctoecat' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/minctoecat /build/buildd/minc-2.0.16/debian/tmp//usr/bin/minctoecat /bin/bash ./libtool --mode=install /usr/bin/install -c 'mnc2nii' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mnc2nii' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/mnc2nii /build/buildd/minc-2.0.16/debian/tmp//usr/bin/mnc2nii /bin/bash ./libtool --mode=install /usr/bin/install -c 'nii2mnc' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/nii2mnc' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/nii2mnc /build/buildd/minc-2.0.16/debian/tmp//usr/bin/nii2mnc /bin/bash ./libtool --mode=install /usr/bin/install -c 'upet2mnc' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/upet2mnc' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/upet2mnc /build/buildd/minc-2.0.16/debian/tmp//usr/bin/upet2mnc /bin/bash ./libtool --mode=install /usr/bin/install -c 'dcm2mnc' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/dcm2mnc' libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/dcm2mnc /build/buildd/minc-2.0.16/debian/tmp//usr/bin/dcm2mnc /bin/bash ./libtool --mode=install /usr/bin/install -c 'vff2mnc' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/vff2mnc' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/vff2mnc /build/buildd/minc-2.0.16/debian/tmp//usr/bin/vff2mnc /bin/bash ./libtool --mode=install /usr/bin/install -c 'acr_test' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/acr_test' libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/acr_test /build/buildd/minc-2.0.16/debian/tmp//usr/bin/acr_test /bin/bash ./libtool --mode=install /usr/bin/install -c 'dump_acr_nema' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/dump_acr_nema' libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/dump_acr_nema /build/buildd/minc-2.0.16/debian/tmp//usr/bin/dump_acr_nema /bin/bash ./libtool --mode=install /usr/bin/install -c 'extract_acr_nema' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/extract_acr_nema' libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/extract_acr_nema /build/buildd/minc-2.0.16/debian/tmp//usr/bin/extract_acr_nema /bin/bash ./libtool --mode=install /usr/bin/install -c 'read_acr_nema' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/read_acr_nema' libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/read_acr_nema /build/buildd/minc-2.0.16/debian/tmp//usr/bin/read_acr_nema /bin/bash ./libtool --mode=install /usr/bin/install -c 'dicom_test' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/dicom_test' libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/dicom_test /build/buildd/minc-2.0.16/debian/tmp//usr/bin/dicom_test /bin/bash ./libtool --mode=install /usr/bin/install -c 'copy_acr_nema' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/copy_acr_nema' libtool: install: warning: `libacr_nema.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/copy_acr_nema /build/buildd/minc-2.0.16/debian/tmp//usr/bin/copy_acr_nema /bin/bash ./libtool --mode=install /usr/bin/install -c 'byte_swap' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/byte_swap' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/byte_swap /build/buildd/minc-2.0.16/debian/tmp//usr/bin/byte_swap /bin/bash ./libtool --mode=install /usr/bin/install -c 'extract' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/extract' libtool: install: warning: `libvolume_io2.la' has not been installed in `/usr/lib' libtool: install: warning: `libminc2.la' has not been installed in `/usr/lib' /usr/bin/install -c .libs/extract /build/buildd/minc-2.0.16/debian/tmp//usr/bin/extract test -z "/usr/bin" || /bin/mkdir -p "/build/buildd/minc-2.0.16/debian/tmp//usr/bin" /usr/bin/install -c 'progs/xfm/xfmflip' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/xfmflip' test -z "/usr/bin" || /bin/mkdir -p "/build/buildd/minc-2.0.16/debian/tmp//usr/bin" /usr/bin/install -c 'progs/mincdiff/mincdiff' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincdiff' /usr/bin/install -c 'progs/mincedit/mincedit' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincedit' /usr/bin/install -c 'progs/mincheader/mincheader' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincheader' /usr/bin/install -c 'progs/minchistory/minchistory' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/minchistory' /usr/bin/install -c 'progs/mincpik/mincpik' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincpik' /usr/bin/install -c 'progs/mincview/mincview' '/build/buildd/minc-2.0.16/debian/tmp//usr/bin/mincview' test -z "/usr/include" || /bin/mkdir -p "/build/buildd/minc-2.0.16/debian/tmp//usr/include" /usr/bin/install -c -m 644 'libsrc/minc.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/minc.h' /usr/bin/install -c -m 644 'libsrc/ParseArgv.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/ParseArgv.h' /usr/bin/install -c -m 644 'libsrc/voxel_loop.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/voxel_loop.h' /usr/bin/install -c -m 644 'libsrc/nd_loop.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/nd_loop.h' /usr/bin/install -c -m 644 'libsrc/time_stamp.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/time_stamp.h' /usr/bin/install -c -m 644 'libsrc/minc_compat.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/minc_compat.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io.h' /usr/bin/install -c -m 644 'libsrc2/minc2.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/minc2.h' /usr/bin/install -c -m 644 'libsrc/minc_simple.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/minc_simple.h' /usr/bin/install -c -m 644 'conversion/Acr_nema/acr_nema.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/acr_nema.h' test -z "/usr/include/acr_nema" || /bin/mkdir -p "/build/buildd/minc-2.0.16/debian/tmp//usr/include/acr_nema" /usr/bin/install -c -m 644 'conversion/Acr_nema/acr_nema/acr_io.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/acr_nema/acr_io.h' /usr/bin/install -c -m 644 'conversion/Acr_nema/acr_nema/dicom_client_routines.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/acr_nema/dicom_client_routines.h' /usr/bin/install -c -m 644 'conversion/Acr_nema/acr_nema/dicom_network.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/acr_nema/dicom_network.h' /usr/bin/install -c -m 644 'conversion/Acr_nema/acr_nema/element.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/acr_nema/element.h' /usr/bin/install -c -m 644 'conversion/Acr_nema/acr_nema/file_io.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/acr_nema/file_io.h' /usr/bin/install -c -m 644 'conversion/Acr_nema/acr_nema/group.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/acr_nema/group.h' /usr/bin/install -c -m 644 'conversion/Acr_nema/acr_nema/message.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/acr_nema/message.h' /usr/bin/install -c -m 644 'conversion/Acr_nema/acr_nema/value_repr.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/acr_nema/value_repr.h' test -z "/usr/include/volume_io" || /bin/mkdir -p "/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io" /usr/bin/install -c -m 644 'volume_io/Include/volume_io/alloc.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/alloc.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/arrays.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/arrays.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/basic.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/basic.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/def_math.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/def_math.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/files.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/files.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/geom_structs.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/geom_structs.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/geometry.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/geometry.h' /usr/bin/install -c -m 644 'volume_io/Include/internal_volume_io.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/internal_volume_io.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/multidim.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/multidim.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/progress.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/progress.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/string_funcs.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/string_funcs.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/system_dependent.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/system_dependent.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/transforms.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/transforms.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/vol_io_prototypes.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/vol_io_prototypes.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/volume.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/volume.h' /usr/bin/install -c -m 644 'volume_io/Include/volume_io/volume_cache.h' '/build/buildd/minc-2.0.16/debian/tmp//usr/include/volume_io/volume_cache.h' test -z "/usr/share/man/man1" || /bin/mkdir -p "/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1" /usr/bin/install -c -m 644 './progs/coordinates/voxeltoworld.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/voxeltoworld.1' /usr/bin/install -c -m 644 './progs/minc_modify_header/minc_modify_header.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/minc_modify_header.1' /usr/bin/install -c -m 644 './progs/mincaverage/mincaverage.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincaverage.1' /usr/bin/install -c -m 644 './progs/minccalc/minccalc.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/minccalc.1' /usr/bin/install -c -m 644 './progs/mincconcat/mincconcat.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincconcat.1' /usr/bin/install -c -m 644 './progs/minccopy/minccopy.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/minccopy.1' /usr/bin/install -c -m 644 './progs/mincdiff/mincdiff.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincdiff.1' /usr/bin/install -c -m 644 './progs/mincedit/mincedit.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincedit.1' /usr/bin/install -c -m 644 './progs/mincexpand/mincexpand.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincexpand.1' /usr/bin/install -c -m 644 './progs/mincextract/mincextract.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincextract.1' /usr/bin/install -c -m 644 './progs/mincgen/mincgen.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincgen.1' /usr/bin/install -c -m 644 './progs/mincheader/mincheader.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincheader.1' /usr/bin/install -c -m 644 './progs/minchistory/minchistory.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/minchistory.1' /usr/bin/install -c -m 644 './progs/mincinfo/mincinfo.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincinfo.1' /usr/bin/install -c -m 644 './progs/minclookup/minclookup.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/minclookup.1' /usr/bin/install -c -m 644 './progs/mincmakescalar/mincmakescalar.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincmakescalar.1' /usr/bin/install -c -m 644 './progs/mincmakevector/mincmakevector.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincmakevector.1' /usr/bin/install -c -m 644 './progs/mincmath/mincmath.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincmath.1' /usr/bin/install -c -m 644 './progs/mincpik/mincpik.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincpik.1' /usr/bin/install -c -m 644 './progs/mincresample/mincresample.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincresample.1' /usr/bin/install -c -m 644 './progs/mincreshape/mincreshape.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincreshape.1' /usr/bin/install -c -m 644 './progs/mincstats/mincstats.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincstats.1' /usr/bin/install -c -m 644 './progs/minctoraw/minctoraw.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/minctoraw.1' /usr/bin/install -c -m 644 './progs/mincview/invert_raw_image.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/invert_raw_image.1' /usr/bin/install -c -m 644 './progs/mincview/mincview.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincview.1' /usr/bin/install -c -m 644 './progs/mincwindow/mincwindow.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincwindow.1' /usr/bin/install -c -m 644 './progs/rawtominc/rawtominc.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/rawtominc.1' /usr/bin/install -c -m 644 './progs/xfm/transformtags.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/transformtags.1' /usr/bin/install -c -m 644 './progs/xfm/xfmconcat.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/xfmconcat.1' /usr/bin/install -c -m 644 './progs/xfm/xfminvert.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/xfminvert.1' /usr/bin/install -c -m 644 './progs/xfm/xfmflip.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/xfmflip.1' /usr/bin/install -c -m 644 './progs/mincconvert/mincconvert.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mincconvert.1' /usr/bin/install -c -m 644 './conversion/ecattominc/ecattominc.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/ecattominc.1' /usr/bin/install -c -m 644 './conversion/minctoecat/minctoecat.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/minctoecat.1' /usr/bin/install -c -m 644 './conversion/nifti1/nii2mnc.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/nii2mnc.1' /usr/bin/install -c -m 644 './conversion/nifti1/mnc2nii.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/mnc2nii.1' /usr/bin/install -c -m 644 './conversion/micropet/upet2mnc.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/upet2mnc.1' /usr/bin/install -c -m 644 './conversion/dcm2mnc/dcm2mnc.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/dcm2mnc.1' /usr/bin/install -c -m 644 './conversion/vff2mnc/vff2mnc.man1' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man1/vff2mnc.1' test -z "/usr/share/man/man3" || /bin/mkdir -p "/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man3" /usr/bin/install -c -m 644 './libsrc/ParseArgv.man3' '/build/buildd/minc-2.0.16/debian/tmp//usr/share/man/man3/ParseArgv.3' make[3]: Leaving directory `/build/buildd/minc-2.0.16' make[2]: Leaving directory `/build/buildd/minc-2.0.16' Making install in volume_io make[2]: Entering directory `/build/buildd/minc-2.0.16/volume_io' Making install in Documentation make[3]: Entering directory `/build/buildd/minc-2.0.16/volume_io/Documentation' make[4]: Entering directory `/build/buildd/minc-2.0.16/volume_io/Documentation' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/build/buildd/minc-2.0.16/volume_io/Documentation' make[3]: Leaving directory `/build/buildd/minc-2.0.16/volume_io/Documentation' Making install in Testing make[3]: Entering directory `/build/buildd/minc-2.0.16/volume_io/Testing' make[4]: Entering directory `/build/buildd/minc-2.0.16/volume_io/Testing' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/build/buildd/minc-2.0.16/volume_io/Testing' make[3]: Leaving directory `/build/buildd/minc-2.0.16/volume_io/Testing' make[3]: Entering directory `/build/buildd/minc-2.0.16/volume_io' make[4]: Entering directory `/build/buildd/minc-2.0.16/volume_io' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/build/buildd/minc-2.0.16/volume_io' make[3]: Leaving directory `/build/buildd/minc-2.0.16/volume_io' make[2]: Leaving directory `/build/buildd/minc-2.0.16/volume_io' Making install in testdir make[2]: Entering directory `/build/buildd/minc-2.0.16/testdir' cd . && chmod +x run_tests.sh run_test2.sh xfmconcat_01.sh xfmconcat_02.sh make[3]: Entering directory `/build/buildd/minc-2.0.16/testdir' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/build/buildd/minc-2.0.16/testdir' make[2]: Leaving directory `/build/buildd/minc-2.0.16/testdir' Making install in doc make[2]: Entering directory `/build/buildd/minc-2.0.16/doc' make[3]: Entering directory `/build/buildd/minc-2.0.16/doc' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/build/buildd/minc-2.0.16/doc' make[2]: Leaving directory `/build/buildd/minc-2.0.16/doc' Making install in libsrc2 make[2]: Entering directory `/build/buildd/minc-2.0.16/libsrc2' Making install in test make[3]: Entering directory `/build/buildd/minc-2.0.16/libsrc2/test' cd . && chmod +x testminctools.sh make[4]: Entering directory `/build/buildd/minc-2.0.16/libsrc2/test' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/build/buildd/minc-2.0.16/libsrc2/test' make[3]: Leaving directory `/build/buildd/minc-2.0.16/libsrc2/test' make[3]: Entering directory `/build/buildd/minc-2.0.16/libsrc2' make[4]: Entering directory `/build/buildd/minc-2.0.16/libsrc2' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/build/buildd/minc-2.0.16/libsrc2' make[3]: Leaving directory `/build/buildd/minc-2.0.16/libsrc2' make[2]: Leaving directory `/build/buildd/minc-2.0.16/libsrc2' make[1]: Leaving directory `/build/buildd/minc-2.0.16' dh_installdirs -pminc-tools rm -f debian/tmp/usr/bin/mincexample? rm -f debian/tmp/usr/bin/byte_swap rm -f debian/tmp/usr/bin/extract rm -f debian/tmp/usr/bin/acr_test rm -f debian/tmp/usr/bin/dicom_test dh_install -pminc-tools --autodest debian/tmp/usr/bin dh_install -pminc-tools --autodest debian/tmp/usr/share/man dh_link -pminc-tools \ /usr/share/man/man1/voxeltoworld.1 \ /usr/share/man/man1/worldtovoxel.1 dh_installdirs -plibminc2-1 dh_install -plibminc2-1 --autodest debian/tmp/usr/lib/lib*.so.* dh_installdirs -plibminc-dev dh_install -plibminc-dev --autodest debian/tmp/usr/lib/lib*.so dh_install -plibminc-dev --autodest debian/tmp/usr/lib/lib*.a dh_install -plibminc-dev --autodest debian/tmp/usr/include dh_installdocs -plibminc-dev GETTING_STARTED doc/prog_ref.ps doc/prog_guide.ps volume_io/Documentation/volume_io.ps debian/index.html dh_installdocs -pminc-tools ./README ./NEWS ./AUTHORS dh_installexamples -pminc-tools dh_installman -pminc-tools dh_installinfo -pminc-tools dh_installmenu -pminc-tools dh_installcron -pminc-tools dh_installinit -pminc-tools dh_installdebconf -pminc-tools dh_installemacsen -pminc-tools dh_installcatalogs -pminc-tools dh_installpam -pminc-tools dh_installlogrotate -pminc-tools dh_installlogcheck -pminc-tools dh_installchangelogs -pminc-tools dh_installudev -pminc-tools dh_lintian -pminc-tools dh_install -pminc-tools dh_link -pminc-tools dh_installmime -pminc-tools dh_installdocs -plibminc2-1 ./README ./NEWS ./AUTHORS dh_installexamples -plibminc2-1 dh_installman -plibminc2-1 dh_installinfo -plibminc2-1 dh_installmenu -plibminc2-1 dh_installcron -plibminc2-1 dh_installinit -plibminc2-1 dh_installdebconf -plibminc2-1 dh_installemacsen -plibminc2-1 dh_installcatalogs -plibminc2-1 dh_installpam -plibminc2-1 dh_installlogrotate -plibminc2-1 dh_installlogcheck -plibminc2-1 dh_installchangelogs -plibminc2-1 dh_installudev -plibminc2-1 dh_lintian -plibminc2-1 dh_install -plibminc2-1 dh_link -plibminc2-1 dh_installmime -plibminc2-1 dh_installdocs -plibminc-dev ./README ./NEWS ./AUTHORS dh_installexamples -plibminc-dev dh_installman -plibminc-dev dh_installinfo -plibminc-dev dh_installmenu -plibminc-dev dh_installcron -plibminc-dev dh_installinit -plibminc-dev dh_installdebconf -plibminc-dev dh_installemacsen -plibminc-dev dh_installcatalogs -plibminc-dev dh_installpam -plibminc-dev dh_installlogrotate -plibminc-dev dh_installlogcheck -plibminc-dev dh_installchangelogs -plibminc-dev dh_installudev -plibminc-dev dh_lintian -plibminc-dev dh_install -plibminc-dev dh_link -plibminc-dev dh_installmime -plibminc-dev dh_strip -pminc-tools dh_strip debug symbol extraction: all non-arch-all packages for this build platform ia64: minc-tools libminc2-1 libminc-dev dh_strip debug symbol extraction: packages to act on: minc-tools dh_strip debug symbol extraction: ignored packages: pkgstriptranslations: processing control file: ./debian/minc-tools-dbgsym/DEBIAN/control, package minc-tools-dbgsym, directory ./debian/minc-tools-dbgsym pkgstriptranslations: minc-tools-dbgsym does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `/build/buildd/minc-2.0.16/debian/minc-tools-dbgsym/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `minc-tools-dbgsym' in `../minc-tools-dbgsym_2.0.16-4_ia64.ddeb'. dh_compress -pminc-tools dh_fixperms -pminc-tools dh_makeshlibs -pminc-tools dh_strip -plibminc2-1 dh_strip debug symbol extraction: all non-arch-all packages for this build platform ia64: minc-tools libminc2-1 libminc-dev dh_strip debug symbol extraction: packages to act on: libminc2-1 dh_strip debug symbol extraction: ignored packages: pkgstriptranslations: processing control file: ./debian/libminc2-1-dbgsym/DEBIAN/control, package libminc2-1-dbgsym, directory ./debian/libminc2-1-dbgsym pkgstriptranslations: libminc2-1-dbgsym does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `/build/buildd/minc-2.0.16/debian/libminc2-1-dbgsym/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `libminc2-1-dbgsym' in `../libminc2-1-dbgsym_2.0.16-4_ia64.ddeb'. dh_compress -plibminc2-1 dh_fixperms -plibminc2-1 dh_makeshlibs -plibminc2-1 dh_strip -plibminc-dev dh_strip debug symbol extraction: all non-arch-all packages for this build platform ia64: minc-tools libminc2-1 libminc-dev dh_strip debug symbol extraction: packages to act on: libminc-dev dh_strip debug symbol extraction: ignored packages: dh_compress -plibminc-dev dh_fixperms -plibminc-dev dh_makeshlibs -plibminc-dev dh_installdeb -pminc-tools dh_perl -pminc-tools dh_shlibdeps -pminc-tools dpkg-shlibdeps: warning: dependency on libz.so.1 could be avoided if "debian/minc-tools/usr/bin/mincstats debian/minc-tools/usr/bin/nii2mnc debian/minc-tools/usr/bin/invert_raw_image debian/minc-tools/usr/bin/mincmakescalar debian/minc-tools/usr/bin/mincexpand debian/minc-tools/usr/bin/dump_acr_nema debian/minc-tools/usr/bin/upet2mnc debian/minc-tools/usr/bin/minccopy debian/minc-tools/usr/bin/xfminvert debian/minc-tools/usr/bin/read_acr_nema debian/minc-tools/usr/bin/mincconvert debian/minc-tools/usr/bin/minctoraw debian/minc-tools/usr/bin/mincreshape debian/minc-tools/usr/bin/mincresample debian/minc-tools/usr/bin/minccalc debian/minc-tools/usr/bin/mincinfo debian/minc-tools/usr/bin/copy_acr_nema debian/minc-tools/usr/bin/vff2mnc debian/minc-tools/usr/bin/mincdump debian/minc-tools/usr/bin/mincmakevector debian/minc-tools/usr/bin/mincconcat debian/minc-tools/usr/bin/minctoecat debian/minc-tools/usr/bin/mincaverage debian/minc-tools/usr/bin/minc_modify_header debian/minc-tools/usr/bin/ecattominc debian/minc-tools/usr/bin/mincextract debian/minc-tools/usr/bin/voxeltoworld debian/minc-tools/usr/bin/mincwindow debian/minc-tools/usr/bin/mnc2nii debian/minc-tools/usr/bin/dcm2mnc debian/minc-tools/usr/bin/mincmath debian/minc-tools/usr/bin/worldtovoxel debian/minc-tools/usr/bin/mincgen debian/minc-tools/usr/bin/xfmconcat debian/minc-tools/usr/bin/rawtominc debian/minc-tools/usr/bin/extract_acr_nema debian/minc-tools/usr/bin/transformtags debian/minc-tools/usr/bin/minclookup" were not uselessly linked against it (they use none of its symbols). dh_installdeb -plibminc2-1 dh_perl -plibminc2-1 dh_shlibdeps -plibminc2-1 dpkg-shlibdeps: warning: symbol MI2attinq used by debian/libminc2-1/usr/lib/libvolume_io2.so.1.1.1 found in none of the libraries. dpkg-shlibdeps: warning: symbol miattputdbl used by debian/libminc2-1/usr/lib/libvolume_io2.so.1.1.1 found in none of the libraries. dpkg-shlibdeps: warning: symbol micreate used by debian/libminc2-1/usr/lib/libvolume_io2.so.1.1.1 found in none of the libraries. dpkg-shlibdeps: warning: symbol miicv_setstr used by debian/libminc2-1/usr/lib/libvolume_io2.so.1.1.1 found in none of the libraries. dpkg-shlibdeps: warning: symbol miattgetstr used by debian/libminc2-1/usr/lib/libvolume_io2.so.1.1.1 found in none of the libraries. dpkg-shlibdeps: warning: symbol miopen used by debian/libminc2-1/usr/lib/libvolume_io2.so.1.1.1 found in none of the libraries. dpkg-shlibdeps: warning: symbol miset_valid_range used by debian/libminc2-1/usr/lib/libvolume_io2.so.1.1.1 found in none of the libraries. dpkg-shlibdeps: warning: symbol micreate_std_variable used by debian/libminc2-1/usr/lib/libvolume_io2.so.1.1.1 found in none of the libraries. dpkg-shlibdeps: warning: symbol MI2varid used by debian/libminc2-1/usr/lib/libvolume_io2.so.1.1.1 found in none of the libraries. dpkg-shlibdeps: warning: symbol micopy_all_var_defs used by debian/libminc2-1/usr/lib/libvolume_io2.so.1.1.1 found in none of the libraries. dpkg-shlibdeps: warning: 26 other similar warnings have been skipped (use -v to see them all). dpkg-shlibdeps: warning: dependency on libz.so.1 could be avoided if "debian/libminc2-1/usr/lib/libvolume_io2.so.1.1.1 debian/libminc2-1/usr/lib/libminc2.so.1.1.1 debian/libminc2-1/usr/lib/libacr_nema.so.0.0.0" were not uselessly linked against it (they use none of its symbols). dh_installdeb -plibminc-dev dh_perl -plibminc-dev dh_shlibdeps -plibminc-dev dh_gencontrol -pminc-tools dpkg-gencontrol: warning: unknown substitution variable ${misc:Depends} # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/minc-tools/usr/share/doc ] || \ [ ! -d debian/minc-tools/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/minc-tools/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/minc-tools/usr/share/doc/minc-tools; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/minc-tools/usr/share/doc/minc-tools/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in minc-tools to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done Searching for duplicated docs in dependency libminc2-1... symlinking ./NEWS.gz in minc-tools to file in libminc2-1 symlinking ./AUTHORS in minc-tools to file in libminc2-1 symlinking ./README.gz in minc-tools to file in libminc2-1 symlinking ./changelog.Debian.gz in minc-tools to file in libminc2-1 # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/minc-tools/usr/share/gnome/help ]; then \ cd debian/minc-tools && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p minc-tools dh_md5sums -pminc-tools dh_builddeb -pminc-tools pkgstriptranslations: processing control file: ./debian/minc-tools/DEBIAN/control, package minc-tools, directory ./debian/minc-tools pkgstriptranslations: minc-tools does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `debian/minc-tools/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `minc-tools' in `../minc-tools_2.0.16-4_ia64.deb'. dh_gencontrol -plibminc2-1 dpkg-gencontrol: warning: unknown substitution variable ${misc:Depends} # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/libminc2-1/usr/share/doc ] || \ [ ! -d debian/libminc2-1/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/libminc2-1/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/libminc2-1/usr/share/doc/libminc2-1; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/libminc2-1/usr/share/doc/libminc2-1/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in libminc2-1 to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/libminc2-1/usr/share/gnome/help ]; then \ cd debian/libminc2-1 && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p libminc2-1 dh_md5sums -plibminc2-1 dh_builddeb -plibminc2-1 pkgstriptranslations: processing control file: ./debian/minc-tools/DEBIAN/control, package minc-tools, directory ./debian/minc-tools pkgstriptranslations: minc-tools does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/libminc2-1/DEBIAN/control, package libminc2-1, directory ./debian/libminc2-1 pkgstriptranslations: libminc2-1 does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `debian/libminc2-1/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `libminc2-1' in `../libminc2-1_2.0.16-4_ia64.deb'. dh_gencontrol -plibminc-dev dpkg-gencontrol: warning: unknown substitution variable ${misc:Depends} # symlink identical documentation to depending packages [ -n "$CDBS_NO_DOC_SYMLINKING" ] || \ [ -h debian/libminc-dev/usr/share/doc ] || \ [ ! -d debian/libminc-dev/usr/share/doc ] || \ for dep in `perl -ne 'if (/^(Pre-)?Depends:/) {s/^\w+://; foreach (split /,/) { split; print($_[0], "\n"); } }' debian/libminc-dev/DEBIAN/control`; do \ if [ -d debian/$dep/usr/share/doc ]; then \ echo "Searching for duplicated docs in dependency $dep..."; \ rootdir=`pwd`; \ (cd debian/libminc-dev/usr/share/doc/libminc-dev; find -type f ! -name copyright | while read f; do \ thisfile="$rootdir/debian/libminc-dev/usr/share/doc/libminc-dev/$f"; \ depfile="$rootdir/debian/$dep/usr/share/doc/$dep/$f"; \ if [ -f $depfile -o -L $depfile ] && zcmp $thisfile $depfile >/dev/null; then \ echo " symlinking $f in libminc-dev to file in $dep"; \ rm $thisfile; ln -s /usr/share/doc/$dep/$f $thisfile; \ fi; \ done ); \ fi; \ done Searching for duplicated docs in dependency libminc2-1... symlinking ./README.gz in libminc-dev to file in libminc2-1 symlinking ./NEWS.gz in libminc-dev to file in libminc2-1 symlinking ./changelog.Debian.gz in libminc-dev to file in libminc2-1 symlinking ./AUTHORS in libminc-dev to file in libminc2-1 # symlink identical Gnome help files within packages if [ -z "$CDBS_NO_GNOME_HELP_SYMLINKING" ] && [ -d debian/libminc-dev/usr/share/gnome/help ]; then \ cd debian/libminc-dev && LC_ALL=C fdupes -r1nq usr/share/gnome/help | while read s; do \ set -- $(echo $s | tr ' ' '\n' | sort); \ f=$1; shift; \ for d; do \ echo "symlinking duplicate Gnome help file $d to $f"; \ rm $d; ln -s /$f $d; \ done; \ done; \ fi dh_link -p libminc-dev dh_md5sums -plibminc-dev dh_builddeb -plibminc-dev pkgstriptranslations: processing control file: ./debian/minc-tools/DEBIAN/control, package minc-tools, directory ./debian/minc-tools pkgstriptranslations: minc-tools does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/libminc2-1/DEBIAN/control, package libminc2-1, directory ./debian/libminc2-1 pkgstriptranslations: libminc2-1 does not contain translations, skipping pkgstriptranslations: processing control file: ./debian/libminc-dev/DEBIAN/control, package libminc-dev, directory ./debian/libminc-dev pkgstriptranslations: libminc-dev does not contain translations, skipping pkgstriptranslations: no translation files, not creating tarball pkgmaintainermangler: Maintainer field overridden to "Ubuntu MOTU Developers " warning, `debian/libminc-dev/DEBIAN/control' contains user-defined field `Original-Maintainer' dpkg-deb: ignoring 1 warnings about the control file(s) dpkg-deb: building package `libminc-dev' in `../libminc-dev_2.0.16-4_ia64.deb'. dpkg-genchanges -B -mUbuntu/ia64 Build Daemon >../minc_2.0.16-4_ia64.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20090112-1519 Publishing debug debs. chroot-autobuild/build/buildd/minc-tools_2.0.16-4_ia64.deb: new debian package, version 2.0. size 654912 bytes: control archive= 3237 bytes. 1184 bytes, 23 lines control 5212 bytes, 86 lines md5sums Package: minc-tools Source: minc Version: 2.0.16-4 Architecture: ia64 Maintainer: Ubuntu MOTU Developers Original-Maintainer: Debian-Med Packaging Team Installed-Size: 2980 Depends: libc6.1 (>= 2.3), libhdf5-openmpi-1.6.6-0, libminc2-1, libnetcdf4, zlib1g (>= 1:1.1.4), csh | c-shell, netcdf-bin, libgetopt-tabular-perl, libtext-format-perl, imagemagick Section: science Priority: optional Homepage: http://www.bic.mni.mcgill.ca/software/ Description: MNI medical image format tools This package contains tools to manipulate MINC files. . The Minc file format is a highly flexible medical image file format built on top of the NetCDF generalized data format. The format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. The format, libraries and tools are designed for use in a medical-imaging research environment: they are simple and powerful and make no attempt to provide a pretty interface to users. chroot-autobuild/build/buildd/libminc2-1_2.0.16-4_ia64.deb: new debian package, version 2.0. size 365270 bytes: control archive= 1325 bytes. 1223 bytes, 25 lines control 539 bytes, 8 lines md5sums 135 bytes, 7 lines * postinst #!/bin/sh 132 bytes, 7 lines * postrm #!/bin/sh 74 bytes, 3 lines shlibs Package: libminc2-1 Source: minc Version: 2.0.16-4 Architecture: ia64 Maintainer: Ubuntu MOTU Developers Original-Maintainer: Debian-Med Packaging Team Installed-Size: 1736 Depends: libc6.1 (>= 2.3), libhdf5-openmpi-1.6.6-0, libnetcdf4, zlib1g (>= 1:1.1.4) Section: libs Priority: optional Homepage: http://www.bic.mni.mcgill.ca/software/ Description: MNI medical image format library This package contains the libraries libminc2 and libvolume_io2. . The Minc file format is a highly flexible medical image file format. Minc version 1 is built on top of the NetCDF generalized data format. Minc version 2 is built on top of the HDF data format. This library handles both formats. In each case the format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. The format, libraries and tools are designed for use in a medical-imaging research environment : they are simple and powerful and make no attempt to provide a pretty interface to users. chroot-autobuild/build/buildd/libminc-dev_2.0.16-4_ia64.deb: new debian package, version 2.0. size 805704 bytes: control archive= 2413 bytes. 1291 bytes, 28 lines control 2884 bytes, 44 lines md5sums 391 bytes, 12 lines * postinst #!/bin/sh 399 bytes, 14 lines * prerm #!/bin/sh Package: libminc-dev Source: minc Version: 2.0.16-4 Architecture: ia64 Maintainer: Ubuntu MOTU Developers Original-Maintainer: Debian-Med Packaging Team Installed-Size: 2928 Depends: libminc2-1 (= 2.0.16-4), libnetcdf-dev, libhdf5-openmpi-dev Conflicts: libminc0-dev Replaces: libminc0-dev Section: libdevel Priority: optional Homepage: http://www.bic.mni.mcgill.ca/software/ Description: MNI medical image format development environment This package contains the library and headers for libminc2 and libvolume_io2. . The Minc file format is a highly flexible medical image file format. Minc version 1 is built on top of the NetCDF generalized data format. Minc version 2 is built on top of the HDF data format. This library handles both formats. In each case the format is simple, self-describing, extensible, portable and N-dimensional, with programming interfaces for both low-level data access and high-level volume manipulation. On top of the libraries is a suite of generic image-file manipulation tools. The format, libraries and tools are designed for use in a medical-imaging research environment : they are simple and powerful and make no attempt to provide a pretty interface to users. chroot-autobuild/build/buildd/minc-tools_2.0.16-4_ia64.deb: drwxr-xr-x root/root 0 2009-01-12 15:16 ./ drwxr-xr-x root/root 0 2009-01-12 15:16 ./usr/ drwxr-xr-x root/root 0 2009-01-12 15:16 ./usr/bin/ -rwxr-xr-x root/root 9280 2009-01-12 15:16 ./usr/bin/voxeltoworld -rwxr-xr-x root/root 9072 2009-01-12 15:16 ./usr/bin/worldtovoxel -rwxr-xr-x root/root 22808 2009-01-12 15:16 ./usr/bin/minc_modify_header -rwxr-xr-x root/root 41664 2009-01-12 15:16 ./usr/bin/mincaverage -rwxr-xr-x root/root 148912 2009-01-12 15:16 ./usr/bin/minccalc -rwxr-xr-x root/root 58400 2009-01-12 15:16 ./usr/bin/mincconcat -rwxr-xr-x root/root 14272 2009-01-12 15:16 ./usr/bin/minccopy -rwxr-xr-x root/root 8880 2009-01-12 15:16 ./usr/bin/mincexpand -rwxr-xr-x root/root 39856 2009-01-12 15:16 ./usr/bin/mincextract -rwxr-xr-x root/root 191056 2009-01-12 15:16 ./usr/bin/mincgen -rwxr-xr-x root/root 31984 2009-01-12 15:16 ./usr/bin/mincinfo -rwxr-xr-x root/root 34208 2009-01-12 15:16 ./usr/bin/minclookup -rwxr-xr-x root/root 20912 2009-01-12 15:16 ./usr/bin/mincmakescalar -rwxr-xr-x root/root 13672 2009-01-12 15:16 ./usr/bin/mincmakevector -rwxr-xr-x root/root 39064 2009-01-12 15:16 ./usr/bin/mincmath -rwxr-xr-x root/root 203728 2009-01-12 15:16 ./usr/bin/mincresample -rwxr-xr-x root/root 107616 2009-01-12 15:16 ./usr/bin/mincreshape -rwxr-xr-x root/root 89328 2009-01-12 15:16 ./usr/bin/mincstats -rwxr-xr-x root/root 15560 2009-01-12 15:16 ./usr/bin/minctoraw -rwxr-xr-x root/root 11128 2009-01-12 15:16 ./usr/bin/invert_raw_image -rwxr-xr-x root/root 12096 2009-01-12 15:16 ./usr/bin/mincwindow -rwxr-xr-x root/root 72160 2009-01-12 15:16 ./usr/bin/rawtominc -rwxr-xr-x root/root 11384 2009-01-12 15:16 ./usr/bin/transformtags -rwxr-xr-x root/root 10096 2009-01-12 15:16 ./usr/bin/xfmconcat -rwxr-xr-x root/root 9840 2009-01-12 15:16 ./usr/bin/xfminvert -rwxr-xr-x root/root 11944 2009-01-12 15:16 ./usr/bin/mincconvert -rwxr-xr-x root/root 66264 2009-01-12 15:16 ./usr/bin/mincdump -rwxr-xr-x root/root 99512 2009-01-12 15:16 ./usr/bin/ecattominc -rwxr-xr-x root/root 104840 2009-01-12 15:16 ./usr/bin/minctoecat -rwxr-xr-x root/root 335720 2009-01-12 15:16 ./usr/bin/mnc2nii -rwxr-xr-x root/root 337480 2009-01-12 15:16 ./usr/bin/nii2mnc -rwxr-xr-x root/root 59056 2009-01-12 15:16 ./usr/bin/upet2mnc -rwxr-xr-x root/root 261544 2009-01-12 15:16 ./usr/bin/dcm2mnc -rwxr-xr-x root/root 54272 2009-01-12 15:16 ./usr/bin/vff2mnc -rwxr-xr-x root/root 15600 2009-01-12 15:16 ./usr/bin/dump_acr_nema -rwxr-xr-x root/root 13288 2009-01-12 15:16 ./usr/bin/extract_acr_nema -rwxr-xr-x root/root 11024 2009-01-12 15:16 ./usr/bin/read_acr_nema -rwxr-xr-x root/root 13392 2009-01-12 15:16 ./usr/bin/copy_acr_nema -rwxr-xr-x root/root 3604 2009-01-12 15:16 ./usr/bin/xfmflip -rwxr-xr-x root/root 3112 2009-01-12 15:16 ./usr/bin/mincdiff -rwxr-xr-x root/root 4985 2009-01-12 15:16 ./usr/bin/mincedit -rwxr-xr-x root/root 3107 2009-01-12 15:16 ./usr/bin/mincheader -rwxr-xr-x root/root 1606 2009-01-12 15:16 ./usr/bin/minchistory -rwxr-xr-x root/root 15568 2009-01-12 15:16 ./usr/bin/mincpik -rwxr-xr-x root/root 3866 2009-01-12 15:16 ./usr/bin/mincview drwxr-xr-x root/root 0 2009-01-12 15:16 ./usr/share/ drwxr-xr-x root/root 0 2009-01-12 15:16 ./usr/share/man/ drwxr-xr-x root/root 0 2009-01-12 15:18 ./usr/share/man/man1/ -rw-r--r-- root/root 2215 2009-01-12 15:16 ./usr/share/man/man1/mincaverage.1.gz -rw-r--r-- root/root 4745 2009-01-12 15:16 ./usr/share/man/man1/minccalc.1.gz -rw-r--r-- root/root 2223 2009-01-12 15:16 ./usr/share/man/man1/mincconcat.1.gz -rw-r--r-- root/root 638 2009-01-12 15:16 ./usr/share/man/man1/minccopy.1.gz -rw-r--r-- root/root 590 2009-01-12 15:16 ./usr/share/man/man1/mincdiff.1.gz -rw-r--r-- root/root 488 2009-01-12 15:16 ./usr/share/man/man1/mincedit.1.gz -rw-r--r-- root/root 957 2009-01-12 15:16 ./usr/share/man/man1/mincexpand.1.gz -rw-r--r-- root/root 1033 2009-01-12 15:16 ./usr/share/man/man1/mincextract.1.gz -rw-r--r-- root/root 4703 2009-01-12 15:16 ./usr/share/man/man1/mincgen.1.gz -rw-r--r-- root/root 716 2009-01-12 15:16 ./usr/share/man/man1/mincheader.1.gz -rw-r--r-- root/root 590 2009-01-12 15:16 ./usr/share/man/man1/minchistory.1.gz -rw-r--r-- root/root 1672 2009-01-12 15:16 ./usr/share/man/man1/mincinfo.1.gz -rw-r--r-- root/root 1935 2009-01-12 15:16 ./usr/share/man/man1/mincmakescalar.1.gz -rw-r--r-- root/root 1429 2009-01-12 15:16 ./usr/share/man/man1/mincmakevector.1.gz -rw-r--r-- root/root 3023 2009-01-12 15:16 ./usr/share/man/man1/mincmath.1.gz -rw-r--r-- root/root 1150 2009-01-12 15:16 ./usr/share/man/man1/mincpik.1.gz -rw-r--r-- root/root 4501 2009-01-12 15:16 ./usr/share/man/man1/mincresample.1.gz -rw-r--r-- root/root 4646 2009-01-12 15:16 ./usr/share/man/man1/mincreshape.1.gz -rw-r--r-- root/root 3869 2009-01-12 15:16 ./usr/share/man/man1/mincstats.1.gz -rw-r--r-- root/root 364 2009-01-12 15:16 ./usr/share/man/man1/invert_raw_image.1.gz -rw-r--r-- root/root 372 2009-01-12 15:16 ./usr/share/man/man1/mincview.1.gz -rw-r--r-- root/root 602 2009-01-12 15:16 ./usr/share/man/man1/mincwindow.1.gz -rw-r--r-- root/root 4570 2009-01-12 15:16 ./usr/share/man/man1/rawtominc.1.gz -rw-r--r-- root/root 469 2009-01-12 15:16 ./usr/share/man/man1/xfmconcat.1.gz -rw-r--r-- root/root 408 2009-01-12 15:16 ./usr/share/man/man1/xfminvert.1.gz -rw-r--r-- root/root 568 2009-01-12 15:16 ./usr/share/man/man1/xfmflip.1.gz -rw-r--r-- root/root 974 2009-01-12 15:16 ./usr/share/man/man1/mincconvert.1.gz -rw-r--r-- root/root 1045 2009-01-12 15:16 ./usr/share/man/man1/ecattominc.1.gz -rw-r--r-- root/root 1416 2009-01-12 15:16 ./usr/share/man/man1/minctoecat.1.gz -rw-r--r-- root/root 1272 2009-01-12 15:16 ./usr/share/man/man1/nii2mnc.1.gz -rw-r--r-- root/root 1253 2009-01-12 15:16 ./usr/share/man/man1/mnc2nii.1.gz -rw-r--r-- root/root 816 2009-01-12 15:16 ./usr/share/man/man1/upet2mnc.1.gz -rw-r--r-- root/root 3674 2009-01-12 15:16 ./usr/share/man/man1/dcm2mnc.1.gz -rw-r--r-- root/root 678 2009-01-12 15:16 ./usr/share/man/man1/vff2mnc.1.gz -rw-r--r-- root/root 498 2009-01-12 15:16 ./usr/share/man/man1/voxeltoworld.1.gz -rw-r--r-- root/root 1631 2009-01-12 15:16 ./usr/share/man/man1/minc_modify_header.1.gz -rw-r--r-- root/root 3214 2009-01-12 15:16 ./usr/share/man/man1/minclookup.1.gz -rw-r--r-- root/root 618 2009-01-12 15:16 ./usr/share/man/man1/minctoraw.1.gz -rw-r--r-- root/root 572 2009-01-12 15:16 ./usr/share/man/man1/transformtags.1.gz drwxr-xr-x root/root 0 2009-01-12 15:16 ./usr/share/man/man3/ -rw-r--r-- root/root 5934 2009-01-12 15:16 ./usr/share/man/man3/ParseArgv.3.gz drwxr-xr-x root/root 0 2009-01-12 15:16 ./usr/share/doc/ drwxr-xr-x root/root 0 2009-01-12 15:18 ./usr/share/doc/minc-tools/ -rw-r--r-- root/root 848 2009-01-12 15:09 ./usr/share/doc/minc-tools/copyright lrwxrwxrwx root/root 0 2009-01-12 15:18 ./usr/share/man/man1/worldtovoxel.1.gz -> voxeltoworld.1.gz lrwxrwxrwx root/root 0 2009-01-12 15:18 ./usr/share/doc/minc-tools/NEWS.gz -> ../libminc2-1/NEWS.gz lrwxrwxrwx root/root 0 2009-01-12 15:18 ./usr/share/doc/minc-tools/AUTHORS -> ../libminc2-1/AUTHORS lrwxrwxrwx root/root 0 2009-01-12 15:18 ./usr/share/doc/minc-tools/README.gz -> ../libminc2-1/README.gz lrwxrwxrwx root/root 0 2009-01-12 15:18 ./usr/share/doc/minc-tools/changelog.Debian.gz -> ../libminc2-1/changelog.Debian.gz chroot-autobuild/build/buildd/libminc2-1_2.0.16-4_ia64.deb: drwxr-xr-x root/root 0 2009-01-12 15:16 ./ drwxr-xr-x root/root 0 2009-01-12 15:16 ./usr/ drwxr-xr-x root/root 0 2009-01-12 15:18 ./usr/lib/ -rw-r--r-- root/root 203112 2009-01-12 15:17 ./usr/lib/libacr_nema.so.0.0.0 -rw-r--r-- root/root 661960 2009-01-12 15:17 ./usr/lib/libminc2.so.1.1.1 -rw-r--r-- root/root 825584 2009-01-12 15:17 ./usr/lib/libvolume_io2.so.1.1.1 drwxr-xr-x root/root 0 2009-01-12 15:16 ./usr/share/ drwxr-xr-x 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./usr/lib/libminc2.so -> libminc2.so.1.1.1 lrwxrwxrwx root/root 0 2009-01-12 15:19 ./usr/lib/libvolume_io2.so -> libvolume_io2.so.1.1.1 lrwxrwxrwx root/root 0 2009-01-12 15:19 ./usr/share/doc/libminc-dev/README.gz -> ../libminc2-1/README.gz lrwxrwxrwx root/root 0 2009-01-12 15:19 ./usr/share/doc/libminc-dev/NEWS.gz -> ../libminc2-1/NEWS.gz lrwxrwxrwx root/root 0 2009-01-12 15:19 ./usr/share/doc/libminc-dev/changelog.Debian.gz -> ../libminc2-1/changelog.Debian.gz lrwxrwxrwx root/root 0 2009-01-12 15:19 ./usr/share/doc/libminc-dev/AUTHORS -> ../libminc2-1/AUTHORS minc_2.0.16-4_ia64.changes: Format: 1.8 Date: Sat, 03 Jan 2009 16:29:06 -0600 Source: minc Binary: minc-tools libminc2-1 libminc-dev Architecture: ia64 Version: 2.0.16-4 Distribution: jaunty Urgency: low Maintainer: Ubuntu/ia64 Build Daemon Changed-By: Steve M. Robbins Description: libminc-dev - MNI medical image format development environment libminc2-1 - MNI medical image format library minc-tools - MNI medical image format tools Closes: 506276 510629 Changes: minc (2.0.16-4) unstable; urgency=low . * debian/patches/05_parseargv.diff: New. Patch from upstream to fix arg parsing on 64bits. Closes: #510629. This was also the root cause of mincheader and mincdiff failing. Closes: #506276. . * debian/control: Add ${misc:Depends}, since we use debhelper. . * debian/rules: Do not install test code acr_test, dicom_test. Checksums-Sha1: b7dd2a414ef8ae0c95309562bb1acce7bdf1e611 654912 minc-tools_2.0.16-4_ia64.deb 59a5031e48a45ffb1c6f77ce98304d40a3b56d24 365270 libminc2-1_2.0.16-4_ia64.deb 89375ccb962d69fa28eeab7c5edfcab28f9f703e 805704 libminc-dev_2.0.16-4_ia64.deb Checksums-Sha256: 1abc453b82323741b96e995a3d6d26de2fff9c9e31014b313816c7a0e3d1d929 654912 minc-tools_2.0.16-4_ia64.deb aa433871caec137e5563ba94cdd5d429eacd43d9bb8434d292839390314a9c32 365270 libminc2-1_2.0.16-4_ia64.deb b6ff7ba75e92035b51930f06861877ce5762e4502f2a4f68fb8d246ecd61a826 805704 libminc-dev_2.0.16-4_ia64.deb Files: 691d9a37a74867c7e6432813805b8757 654912 science optional minc-tools_2.0.16-4_ia64.deb 73b1ebc514ccd7d886dd923854d5d26a 365270 libs optional libminc2-1_2.0.16-4_ia64.deb d7f1db83421076f81d5010e7ad527034 805704 libdevel optional libminc-dev_2.0.16-4_ia64.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/minc-2.0.16 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --root=/srv/hooker.ubuntu.com/home/buildd/build-834395-1938933/chroot-autobuild --purge libxmu6 groff-base libx11-data m4 fontconfig-config defoma ttf-dejavu-core libkpathsea4 gettext file zlib1g-dev libxaw7 libhtml-parser-perl libhdf5-openmpi-1.6.6-0 ttf-dejavu libibverbs1 liburi-perl libxpm4 texlive-common x11-common autotools-dev csh libcroco3 texlive-base-bin libpopt0 libfreetype6 automake libjpeg62 libxcb1 tex-common html2text libjpeg62-dev debhelper libfontconfig1 libmagic1 libgfortran3 libexpat1 bsdmainutils libhdf5-openmpi-dev openmpi-common libxau6 fdupes libx11-6 adduser libglib2.0-0 libnewt0.52 mime-support whiptail intltool libnetcdf-dev libxcb-xlib0 libxt6 libwww-perl libxdmcp6 texlive-base libpoppler3 libhtml-tree-perl texlive-doc-base po-debconf libopenmpi-dev libxml-parser-perl libhtml-tagset-perl libxml2 netbase ed libnetcdf4 libpng12-0 man-db libice6 intltool-debian texlive-latex-base cdbs gettext-base ttf-dejavu-extra libsm6 libxext6 libopenmpi1 autoconf (Reading database ... 16606 files and directories currently installed.) 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Purging configuration files for libnewt0.52 ... Processing triggers for libc6.1 ... ldconfig deferred processing now taking place ****************************************************************************** Finished at 20090112-1520 Build needed 00:09:57, 43060k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '834395-1938933'] Scanning for processes to kill in build 834395-1938933... Scanning for processes to kill in build /home/buildd/build-834395-1938933/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '834395-1938933'] Unmounting chroot for build 834395-1938933... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '834395-1938933'] Removing build 834395-1938933