minia 3.2.6-3 source package in Ubuntu
Changelog
minia (3.2.6-3) unstable; urgency=medium
* Team upload.
* d/control: Only build on architectures supported by gatb-core.
(Closes: #1031532)
* d/control: Bump Standards-Version to 4.6.2; no changes needed.
-- Sergio Durigan Junior <email address hidden> Fri, 17 Feb 2023 17:57:56 -0500
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any-amd64 arm64 mips64el ppc64el ia64 ppc64 riscv64 sparc64 alpha
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Mantic | release | universe | misc | |
| Lunar | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| minia_3.2.6-3.dsc | 2.2 KiB | 9474b8d5f3c058c0c1266f3f3db78e01f3eb88525eb25f88271dabde035090b8 |
| minia_3.2.6.orig.tar.gz | 1.0 MiB | a201c5b479092617259cb1d5e0f0045b80c106e8e2aa9afe4834b4d3dd39ce78 |
| minia_3.2.6-3.debian.tar.xz | 16.9 KiB | 73d70ba57bb92a5442771e3b0c3b5ddbbc05be7b5c269315c84a21651e2a057e |
Available diffs
- diff from 3.2.6-2 to 3.2.6-3 (633 bytes)
No changes file available.
Binary packages built by this source
- minia: short-read biological sequence assembler
What was referred to as "next-generation" DNA sequencing up to
the year 2020 delivered only "short" reads up to ~600 base pairs
in length that would then have to be puzzled by random overlaps
in their sequence towards a complete genome. This is the genome
assembly. And there are many biological pitfalls on long stretches
of low complexity regions and copy number variations and other
sorts of redundancies that render this difficult.
.
This package provides a short-read DNA sequence assembler based on a
de Bruijn graph, capable of assembling a human genome on a desktop
computer in a day.
.
The output of Minia is a set of contigs, i.e. stretches of gap-free
linear overlaps of short reads. In the best possible case this is
a whole chromosome.
.
Minia produces results of similar contiguity and accuracy to other
de Bruijn assemblers (e.g. Velvet).
- minia-dbgsym: debug symbols for minia
