https://launchpad.net/ubuntu/+source/mpb/1.11.1-4/+build/22300116 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lgw01-amd64-003 4.15.0-159-generic #167-Ubuntu SMP Tue Sep 21 08:55:05 UTC 2021 x86_64 Buildd toolchain package versions: launchpad-buildd_203~505~ubuntu18.04.1 python3-lpbuildd_203~505~ubuntu18.04.1 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.9 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32 python3-debian_0.1.32. Syncing the system clock with the buildd NTP service... 19 Oct 03:53:51 ntpdate[1712]: adjust time server 10.211.37.1 offset -0.000052 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22300116 --image-type chroot /home/buildd/filecache-default/cfae87993459679a6aa555d9d98919b1d8858654 Creating target for build PACKAGEBUILD-22300116 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22300116 Starting target for build PACKAGEBUILD-22300116 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22300116 'deb http://ftpmaster.internal/ubuntu jammy main universe' 'deb http://ftpmaster.internal/ubuntu jammy-security main universe' 'deb http://ftpmaster.internal/ubuntu jammy-updates main universe' 'deb http://ftpmaster.internal/ubuntu jammy-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-22300116 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22300116 Updating target for build PACKAGEBUILD-22300116 Get:1 http://ftpmaster.internal/ubuntu jammy InRelease [224 kB] Get:2 http://ftpmaster.internal/ubuntu jammy-security InRelease [74.9 kB] Get:3 http://ftpmaster.internal/ubuntu jammy-updates InRelease [74.9 kB] Get:4 http://ftpmaster.internal/ubuntu jammy-proposed InRelease [74.9 kB] Get:5 http://ftpmaster.internal/ubuntu jammy/main amd64 Packages [1400 kB] Get:6 http://ftpmaster.internal/ubuntu jammy/main Translation-en [512 kB] Get:7 http://ftpmaster.internal/ubuntu jammy/universe amd64 Packages [13.1 MB] Get:8 http://ftpmaster.internal/ubuntu jammy/universe Translation-en [5464 kB] Get:9 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 Packages [199 kB] Get:10 http://ftpmaster.internal/ubuntu jammy-proposed/main Translation-en [82.8 kB] Get:11 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 Packages [645 kB] Get:12 http://ftpmaster.internal/ubuntu jammy-proposed/universe Translation-en [384 kB] Fetched 22.2 MB in 3s (6662 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: base-files base-passwd bsdutils bzip2 ca-certificates coreutils debianutils fakeroot gzip libapparmor1 libargon2-1 libattr1 libaudit-common libaudit1 libblkid1 libbz2-1.0 libcap-ng0 libcap2 libcrypt-dev libcrypt1 libdb5.3 libdebconfclient0 libfakeroot libgdbm-compat4 libgdbm6 libgmp10 libgpg-error0 libgssapi-krb5-2 libhogweed6 libidn2-0 libip4tc2 libisl23 libjson-c5 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblz4-1 liblzma5 libmount1 libmpc3 libmpfr6 libncurses6 libncursesw6 libnettle8 libnpth0 libp11-kit0 libpcre3 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libtasn1-6 libtinfo6 libuuid1 libzstd1 lockfile-progs make mawk mount ncurses-base ncurses-bin optipng patch pinentry-curses readline-common sed sensible-utils sysvinit-utils tar util-linux xz-utils 75 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 12.1 MB of archives. After this operation, 1209 kB disk space will be freed. Get:1 http://ftpmaster.internal/ubuntu jammy/main amd64 libcrypt-dev amd64 1:4.4.18-4ubuntu2 [111 kB] Get:2 http://ftpmaster.internal/ubuntu jammy/main amd64 libcrypt1 amd64 1:4.4.18-4ubuntu2 [82.0 kB] Get:3 http://ftpmaster.internal/ubuntu jammy/main amd64 base-files amd64 12ubuntu1 [63.3 kB] Get:4 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 bsdutils amd64 1:2.36.1-8ubuntu2 [82.8 kB] Get:5 http://ftpmaster.internal/ubuntu jammy/main amd64 coreutils amd64 8.32-4ubuntu3 [1436 kB] Get:6 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 debianutils amd64 5.5-1 [77.5 kB] Get:7 http://ftpmaster.internal/ubuntu jammy/main amd64 gzip amd64 1.10-4ubuntu2 [95.6 kB] Get:8 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libncurses6 amd64 6.2+20210905-1 [110 kB] Get:9 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libncursesw6 amd64 6.2+20210905-1 [147 kB] Get:10 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libtinfo6 amd64 6.2+20210905-1 [104 kB] Get:11 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 ncurses-bin amd64 6.2+20210905-1 [181 kB] Get:12 http://ftpmaster.internal/ubuntu jammy/main amd64 sed amd64 4.7-1ubuntu2 [187 kB] Get:13 http://ftpmaster.internal/ubuntu jammy/main amd64 tar amd64 1.34+dfsg-1build2 [295 kB] Get:14 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 util-linux amd64 2.36.1-8ubuntu2 [1014 kB] Get:15 http://ftpmaster.internal/ubuntu jammy/main amd64 libdebconfclient0 amd64 0.256ubuntu4 [6306 B] Get:16 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 base-passwd amd64 3.5.52 [49.0 kB] Get:17 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 ncurses-base all 6.2+20210905-1 [19.9 kB] Get:18 http://ftpmaster.internal/ubuntu jammy/main amd64 sysvinit-utils amd64 2.96-7ubuntu2 [20.8 kB] Get:19 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 mount amd64 2.36.1-8ubuntu2 [110 kB] Get:20 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libattr1 amd64 1:2.5.1-1 [13.3 kB] Get:21 http://ftpmaster.internal/ubuntu jammy/main amd64 libaudit-common all 1:3.0-2ubuntu3 [4688 B] Get:22 http://ftpmaster.internal/ubuntu jammy/main amd64 libcap-ng0 amd64 0.7.9-2.2build2 [11.6 kB] Get:23 http://ftpmaster.internal/ubuntu jammy/main amd64 libaudit1 amd64 1:3.0-2ubuntu3 [45.9 kB] Get:24 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libblkid1 amd64 2.36.1-8ubuntu2 [98.2 kB] Get:25 http://ftpmaster.internal/ubuntu jammy/main amd64 bzip2 amd64 1.0.8-4ubuntu4 [34.8 kB] Get:26 http://ftpmaster.internal/ubuntu jammy/main amd64 libbz2-1.0 amd64 1.0.8-4ubuntu4 [34.1 kB] Get:27 http://ftpmaster.internal/ubuntu jammy/main amd64 libcap2 amd64 1:2.44-1build2 [18.1 kB] Get:28 http://ftpmaster.internal/ubuntu jammy/main amd64 libdb5.3 amd64 5.3.28+dfsg1-0.8ubuntu2 [721 kB] Get:29 http://ftpmaster.internal/ubuntu jammy/main amd64 libgmp10 amd64 2:6.2.1+dfsg-1ubuntu3 [253 kB] Get:30 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libgpg-error0 amd64 1.42-3 [68.1 kB] Get:31 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libk5crypto3 amd64 1.18.3-7 [86.2 kB] Get:32 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libkrb5support0 amd64 1.18.3-7 [32.2 kB] Get:33 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libkrb5-3 amd64 1.18.3-7 [355 kB] Get:34 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libgssapi-krb5-2 amd64 1.18.3-7 [143 kB] Get:35 http://ftpmaster.internal/ubuntu jammy/main amd64 libkeyutils1 amd64 1.6.1-2ubuntu2 [10.3 kB] Get:36 http://ftpmaster.internal/ubuntu jammy/main amd64 liblz4-1 amd64 1.9.3-2build1 [57.1 kB] Get:37 http://ftpmaster.internal/ubuntu jammy/main amd64 liblzma5 amd64 5.2.5-2build1 [99.8 kB] Get:38 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libselinux1 amd64 3.1-3build3 [74.2 kB] Get:39 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libmount1 amd64 2.36.1-8ubuntu2 [116 kB] Get:40 http://ftpmaster.internal/ubuntu jammy/main amd64 libpcre3 amd64 2:8.39-13build4 [245 kB] Get:41 http://ftpmaster.internal/ubuntu jammy/main amd64 libsemanage-common all 3.1-1ubuntu3 [9606 B] Get:42 http://ftpmaster.internal/ubuntu jammy/main amd64 libsemanage1 amd64 3.1-1ubuntu3 [96.5 kB] Get:43 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libsmartcols1 amd64 2.36.1-8ubuntu2 [49.6 kB] Get:44 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libuuid1 amd64 2.36.1-8ubuntu2 [23.3 kB] Get:45 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libzstd1 amd64 1.4.8+dfsg-3 [324 kB] Get:46 http://ftpmaster.internal/ubuntu jammy/main amd64 libnettle8 amd64 3.7.3-1build1 [159 kB] Get:47 http://ftpmaster.internal/ubuntu jammy/main amd64 libhogweed6 amd64 3.7.3-1build1 [199 kB] Get:48 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libidn2-0 amd64 2.3.2-2 [66.5 kB] Get:49 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libp11-kit0 amd64 0.24.0-5 [252 kB] Get:50 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libseccomp2 amd64 2.5.1-1ubuntu2 [48.2 kB] Get:51 http://ftpmaster.internal/ubuntu jammy/main amd64 libtasn1-6 amd64 4.16.0-2build1 [42.9 kB] Get:52 http://ftpmaster.internal/ubuntu jammy/main amd64 mawk amd64 1.3.4.20200120-2build1 [103 kB] Get:53 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 sensible-utils all 0.0.17 [20.1 kB] Get:54 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 ca-certificates all 20211016 [148 kB] Get:55 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libapparmor1 amd64 3.0.3-0ubuntu2 [37.8 kB] Get:56 http://ftpmaster.internal/ubuntu jammy/main amd64 libargon2-1 amd64 0~20171227-0.2build22 [19.4 kB] Get:57 http://ftpmaster.internal/ubuntu jammy/main amd64 libip4tc2 amd64 1.8.7-1ubuntu3 [19.7 kB] Get:58 http://ftpmaster.internal/ubuntu jammy/main amd64 libjson-c5 amd64 0.15-2build3 [33.3 kB] Get:59 http://ftpmaster.internal/ubuntu jammy/main amd64 readline-common all 8.1-2build1 [53.6 kB] Get:60 http://ftpmaster.internal/ubuntu jammy/main amd64 libreadline8 amd64 8.1-2build1 [153 kB] Get:61 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libsqlite3-0 amd64 3.36.0-2 [641 kB] Get:62 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libgdbm6 amd64 1.21-1 [35.1 kB] Get:63 http://ftpmaster.internal/ubuntu jammy/main amd64 xz-utils amd64 5.2.5-2build1 [84.7 kB] Get:64 http://ftpmaster.internal/ubuntu jammy/main amd64 libfakeroot amd64 1.25.3-1.1ubuntu3 [31.7 kB] Get:65 http://ftpmaster.internal/ubuntu jammy/main amd64 fakeroot amd64 1.25.3-1.1ubuntu3 [60.3 kB] Get:66 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libgdbm-compat4 amd64 1.21-1 [6500 B] Get:67 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libisl23 amd64 0.24-2 [728 kB] Get:68 http://ftpmaster.internal/ubuntu jammy/main amd64 libmpfr6 amd64 4.1.0-3build2 [1425 kB] Get:69 http://ftpmaster.internal/ubuntu jammy/main amd64 libnpth0 amd64 1.6-3build1 [8686 B] Get:70 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 lockfile-progs amd64 0.1.19 [10.0 kB] Get:71 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 make amd64 4.3-4ubuntu2 [179 kB] Get:72 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 optipng amd64 0.7.7-2 [84.7 kB] Get:73 http://ftpmaster.internal/ubuntu jammy/main amd64 patch amd64 2.7.6-7build1 [109 kB] Get:74 http://ftpmaster.internal/ubuntu jammy/main amd64 pinentry-curses amd64 1.1.1-1build1 [34.3 kB] Get:75 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libmpc3 amd64 1.2.1-1 [46.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 12.1 MB in 0s (25.8 MB/s) (Reading database ... 13258 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.18-4ubuntu2_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.18-4ubuntu2) over (1:4.4.18-4ubuntu1) ... Preparing to unpack .../libcrypt1_1%3a4.4.18-4ubuntu2_amd64.deb ... Unpacking libcrypt1:amd64 (1:4.4.18-4ubuntu2) over (1:4.4.18-4ubuntu1) ... Setting up libcrypt1:amd64 (1:4.4.18-4ubuntu2) ... (Reading database ... 13258 files and directories currently installed.) Preparing to unpack .../base-files_12ubuntu1_amd64.deb ... Unpacking base-files (12ubuntu1) over (11.1ubuntu5) ... Setting up base-files (12ubuntu1) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 13258 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.36.1-8ubuntu2_amd64.deb ... Unpacking bsdutils (1:2.36.1-8ubuntu2) over (1:2.36.1-8ubuntu1) ... Setting up bsdutils (1:2.36.1-8ubuntu2) ... (Reading database ... 13258 files and directories currently installed.) Preparing to unpack .../coreutils_8.32-4ubuntu3_amd64.deb ... Unpacking coreutils (8.32-4ubuntu3) over (8.32-4ubuntu2) ... Setting up coreutils (8.32-4ubuntu3) ... (Reading database ... 13258 files and directories currently installed.) Preparing to unpack .../debianutils_5.5-1_amd64.deb ... Unpacking debianutils (5.5-1) over (4.11.2) ... Setting up debianutils (5.5-1) ... update-alternatives: using /usr/bin/which.debianutils to provide /usr/bin/which (which) in auto mode (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../gzip_1.10-4ubuntu2_amd64.deb ... Unpacking gzip (1.10-4ubuntu2) over (1.10-4ubuntu1) ... Setting up gzip (1.10-4ubuntu2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libncurses6_6.2+20210905-1_amd64.deb ... Unpacking libncurses6:amd64 (6.2+20210905-1) over (6.2+20201114-2build1) ... Preparing to unpack .../libncursesw6_6.2+20210905-1_amd64.deb ... Unpacking libncursesw6:amd64 (6.2+20210905-1) over (6.2+20201114-2build1) ... Preparing to unpack .../libtinfo6_6.2+20210905-1_amd64.deb ... Unpacking libtinfo6:amd64 (6.2+20210905-1) over (6.2+20201114-2build1) ... Setting up libtinfo6:amd64 (6.2+20210905-1) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.2+20210905-1_amd64.deb ... Unpacking ncurses-bin (6.2+20210905-1) over (6.2+20201114-2build1) ... Setting up ncurses-bin (6.2+20210905-1) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../sed_4.7-1ubuntu2_amd64.deb ... Unpacking sed (4.7-1ubuntu2) over (4.7-1ubuntu1) ... Setting up sed (4.7-1ubuntu2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../tar_1.34+dfsg-1build2_amd64.deb ... Unpacking tar (1.34+dfsg-1build2) over (1.34+dfsg-1build1) ... Setting up tar (1.34+dfsg-1build2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../util-linux_2.36.1-8ubuntu2_amd64.deb ... Unpacking util-linux (2.36.1-8ubuntu2) over (2.36.1-8ubuntu1) ... Setting up util-linux (2.36.1-8ubuntu2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.256ubuntu4_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.256ubuntu4) over (0.256ubuntu3) ... Setting up libdebconfclient0:amd64 (0.256ubuntu4) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../base-passwd_3.5.52_amd64.deb ... Unpacking base-passwd (3.5.52) over (3.5.51) ... Setting up base-passwd (3.5.52) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.2+20210905-1_all.deb ... Unpacking ncurses-base (6.2+20210905-1) over (6.2+20201114-2build1) ... Setting up ncurses-base (6.2+20210905-1) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_2.96-7ubuntu2_amd64.deb ... Unpacking sysvinit-utils (2.96-7ubuntu2) over (2.96-7ubuntu1) ... Setting up sysvinit-utils (2.96-7ubuntu2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../mount_2.36.1-8ubuntu2_amd64.deb ... Unpacking mount (2.36.1-8ubuntu2) over (2.36.1-8ubuntu1) ... Preparing to unpack .../libattr1_1%3a2.5.1-1_amd64.deb ... Unpacking libattr1:amd64 (1:2.5.1-1) over (1:2.4.48-6build2) ... Setting up libattr1:amd64 (1:2.5.1-1) ... Installing new version of config file /etc/xattr.conf ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libaudit-common_1%3a3.0-2ubuntu3_all.deb ... Unpacking libaudit-common (1:3.0-2ubuntu3) over (1:3.0-2ubuntu2) ... Setting up libaudit-common (1:3.0-2ubuntu3) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.7.9-2.2build2_amd64.deb ... Unpacking libcap-ng0:amd64 (0.7.9-2.2build2) over (0.7.9-2.2build1) ... Setting up libcap-ng0:amd64 (0.7.9-2.2build2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a3.0-2ubuntu3_amd64.deb ... Unpacking libaudit1:amd64 (1:3.0-2ubuntu3) over (1:3.0-2ubuntu2) ... Setting up libaudit1:amd64 (1:3.0-2ubuntu3) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libblkid1_2.36.1-8ubuntu2_amd64.deb ... Unpacking libblkid1:amd64 (2.36.1-8ubuntu2) over (2.36.1-8ubuntu1) ... Setting up libblkid1:amd64 (2.36.1-8ubuntu2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../bzip2_1.0.8-4ubuntu4_amd64.deb ... Unpacking bzip2 (1.0.8-4ubuntu4) over (1.0.8-4ubuntu3) ... Preparing to unpack .../libbz2-1.0_1.0.8-4ubuntu4_amd64.deb ... Unpacking libbz2-1.0:amd64 (1.0.8-4ubuntu4) over (1.0.8-4ubuntu3) ... Setting up libbz2-1.0:amd64 (1.0.8-4ubuntu4) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libcap2_1%3a2.44-1build2_amd64.deb ... Unpacking libcap2:amd64 (1:2.44-1build2) over (1:2.44-1build1) ... Setting up libcap2:amd64 (1:2.44-1build2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libdb5.3_5.3.28+dfsg1-0.8ubuntu2_amd64.deb ... Unpacking libdb5.3:amd64 (5.3.28+dfsg1-0.8ubuntu2) over (5.3.28+dfsg1-0.8ubuntu1) ... Setting up libdb5.3:amd64 (5.3.28+dfsg1-0.8ubuntu2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.2.1+dfsg-1ubuntu3_amd64.deb ... Unpacking libgmp10:amd64 (2:6.2.1+dfsg-1ubuntu3) over (2:6.2.1+dfsg-1ubuntu2) ... Setting up libgmp10:amd64 (2:6.2.1+dfsg-1ubuntu3) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.42-3_amd64.deb ... Unpacking libgpg-error0:amd64 (1.42-3) over (1.38-2build1) ... Setting up libgpg-error0:amd64 (1.42-3) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libk5crypto3_1.18.3-7_amd64.deb ... Unpacking libk5crypto3:amd64 (1.18.3-7) over (1.18.3-6) ... Setting up libk5crypto3:amd64 (1.18.3-7) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libkrb5support0_1.18.3-7_amd64.deb ... Unpacking libkrb5support0:amd64 (1.18.3-7) over (1.18.3-6) ... Setting up libkrb5support0:amd64 (1.18.3-7) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libkrb5-3_1.18.3-7_amd64.deb ... Unpacking libkrb5-3:amd64 (1.18.3-7) over (1.18.3-6) ... Setting up libkrb5-3:amd64 (1.18.3-7) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libgssapi-krb5-2_1.18.3-7_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.18.3-7) over (1.18.3-6) ... Setting up libgssapi-krb5-2:amd64 (1.18.3-7) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libkeyutils1_1.6.1-2ubuntu2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.1-2ubuntu2) over (1.6.1-2ubuntu1) ... Setting up libkeyutils1:amd64 (1.6.1-2ubuntu2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../liblz4-1_1.9.3-2build1_amd64.deb ... Unpacking liblz4-1:amd64 (1.9.3-2build1) over (1.9.3-2) ... Setting up liblz4-1:amd64 (1.9.3-2build1) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../liblzma5_5.2.5-2build1_amd64.deb ... Unpacking liblzma5:amd64 (5.2.5-2build1) over (5.2.5-2) ... Setting up liblzma5:amd64 (5.2.5-2build1) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libselinux1_3.1-3build3_amd64.deb ... Unpacking libselinux1:amd64 (3.1-3build3) over (3.1-3build2) ... Setting up libselinux1:amd64 (3.1-3build3) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libmount1_2.36.1-8ubuntu2_amd64.deb ... Unpacking libmount1:amd64 (2.36.1-8ubuntu2) over (2.36.1-8ubuntu1) ... Setting up libmount1:amd64 (2.36.1-8ubuntu2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libpcre3_2%3a8.39-13build4_amd64.deb ... Unpacking libpcre3:amd64 (2:8.39-13build4) over (2:8.39-13build3) ... Setting up libpcre3:amd64 (2:8.39-13build4) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libsemanage-common_3.1-1ubuntu3_all.deb ... Unpacking libsemanage-common (3.1-1ubuntu3) over (3.1-1ubuntu2) ... Setting up libsemanage-common (3.1-1ubuntu3) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libsemanage1_3.1-1ubuntu3_amd64.deb ... Unpacking libsemanage1:amd64 (3.1-1ubuntu3) over (3.1-1ubuntu2) ... Setting up libsemanage1:amd64 (3.1-1ubuntu3) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.36.1-8ubuntu2_amd64.deb ... Unpacking libsmartcols1:amd64 (2.36.1-8ubuntu2) over (2.36.1-8ubuntu1) ... Setting up libsmartcols1:amd64 (2.36.1-8ubuntu2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libuuid1_2.36.1-8ubuntu2_amd64.deb ... Unpacking libuuid1:amd64 (2.36.1-8ubuntu2) over (2.36.1-8ubuntu1) ... Setting up libuuid1:amd64 (2.36.1-8ubuntu2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libzstd1_1.4.8+dfsg-3_amd64.deb ... Unpacking libzstd1:amd64 (1.4.8+dfsg-3) over (1.4.8+dfsg-2.1) ... Setting up libzstd1:amd64 (1.4.8+dfsg-3) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libnettle8_3.7.3-1build1_amd64.deb ... Unpacking libnettle8:amd64 (3.7.3-1build1) over (3.7.3-1) ... Setting up libnettle8:amd64 (3.7.3-1build1) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libhogweed6_3.7.3-1build1_amd64.deb ... Unpacking libhogweed6:amd64 (3.7.3-1build1) over (3.7.3-1) ... Setting up libhogweed6:amd64 (3.7.3-1build1) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libidn2-0_2.3.2-2_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.2-2) over (2.3.1-1) ... Setting up libidn2-0:amd64 (2.3.2-2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.24.0-5_amd64.deb ... Unpacking libp11-kit0:amd64 (0.24.0-5) over (0.23.22-1build1) ... Setting up libp11-kit0:amd64 (0.24.0-5) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libseccomp2_2.5.1-1ubuntu2_amd64.deb ... Unpacking libseccomp2:amd64 (2.5.1-1ubuntu2) over (2.5.1-1ubuntu1) ... Setting up libseccomp2:amd64 (2.5.1-1ubuntu2) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../libtasn1-6_4.16.0-2build1_amd64.deb ... Unpacking libtasn1-6:amd64 (4.16.0-2build1) over (4.16.0-2) ... Setting up libtasn1-6:amd64 (4.16.0-2build1) ... (Reading database ... 13253 files and directories currently installed.) Preparing to unpack .../00-mawk_1.3.4.20200120-2build1_amd64.deb ... Unpacking mawk (1.3.4.20200120-2build1) over (1.3.4.20200120-2) ... Preparing to unpack .../01-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) over (0.0.14) ... Preparing to unpack .../02-ca-certificates_20211016_all.deb ... Unpacking ca-certificates (20211016) over (20210119ubuntu1) ... Preparing to unpack .../03-libapparmor1_3.0.3-0ubuntu2_amd64.deb ... Unpacking libapparmor1:amd64 (3.0.3-0ubuntu2) over (3.0.3-0ubuntu1) ... Preparing to unpack .../04-libargon2-1_0~20171227-0.2build22_amd64.deb ... Unpacking libargon2-1:amd64 (0~20171227-0.2build22) over (0~20171227-0.2build21.04.0) ... Preparing to unpack .../05-libip4tc2_1.8.7-1ubuntu3_amd64.deb ... Unpacking libip4tc2:amd64 (1.8.7-1ubuntu3) over (1.8.7-1ubuntu2) ... Preparing to unpack .../06-libjson-c5_0.15-2build3_amd64.deb ... Unpacking libjson-c5:amd64 (0.15-2build3) over (0.15-2build2) ... Preparing to unpack .../07-readline-common_8.1-2build1_all.deb ... Unpacking readline-common (8.1-2build1) over (8.1-2) ... Preparing to unpack .../08-libreadline8_8.1-2build1_amd64.deb ... Unpacking libreadline8:amd64 (8.1-2build1) over (8.1-2) ... Preparing to unpack .../09-libsqlite3-0_3.36.0-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.36.0-2) over (3.35.5-1) ... Preparing to unpack .../10-libgdbm6_1.21-1_amd64.deb ... Unpacking libgdbm6:amd64 (1.21-1) over (1.19-2) ... Preparing to unpack .../11-xz-utils_5.2.5-2build1_amd64.deb ... Unpacking xz-utils (5.2.5-2build1) over (5.2.5-2) ... Preparing to unpack .../12-libfakeroot_1.25.3-1.1ubuntu3_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1.1ubuntu3) over (1.25.3-1.1ubuntu2) ... Preparing to unpack .../13-fakeroot_1.25.3-1.1ubuntu3_amd64.deb ... Unpacking fakeroot (1.25.3-1.1ubuntu3) over (1.25.3-1.1ubuntu2) ... Preparing to unpack .../14-libgdbm-compat4_1.21-1_amd64.deb ... Unpacking libgdbm-compat4:amd64 (1.21-1) over (1.19-2) ... Preparing to unpack .../15-libisl23_0.24-2_amd64.deb ... Unpacking libisl23:amd64 (0.24-2) over (0.24-1) ... Preparing to unpack .../16-libmpfr6_4.1.0-3build2_amd64.deb ... Unpacking libmpfr6:amd64 (4.1.0-3build2) over (4.1.0-3build1) ... Preparing to unpack .../17-libnpth0_1.6-3build1_amd64.deb ... Unpacking libnpth0:amd64 (1.6-3build1) over (1.6-3) ... Preparing to unpack .../18-lockfile-progs_0.1.19_amd64.deb ... Unpacking lockfile-progs (0.1.19) over (0.1.18build1) ... Preparing to unpack .../19-make_4.3-4ubuntu2_amd64.deb ... Unpacking make (4.3-4ubuntu2) over (4.3-4ubuntu1) ... Preparing to unpack .../20-optipng_0.7.7-2_amd64.deb ... Unpacking optipng (0.7.7-2) over (0.7.7-1build1) ... Preparing to unpack .../21-patch_2.7.6-7build1_amd64.deb ... Unpacking patch (2.7.6-7build1) over (2.7.6-7) ... Preparing to unpack .../22-pinentry-curses_1.1.1-1build1_amd64.deb ... Unpacking pinentry-curses (1.1.1-1build1) over (1.1.1-1) ... Preparing to unpack .../23-libmpc3_1.2.1-1_amd64.deb ... Unpacking libmpc3:amd64 (1.2.1-1) over (1.2.0-1build1) ... Setting up libip4tc2:amd64 (1.8.7-1ubuntu3) ... Setting up libapparmor1:amd64 (3.0.3-0ubuntu2) ... Setting up libargon2-1:amd64 (0~20171227-0.2build22) ... Setting up libsqlite3-0:amd64 (3.36.0-2) ... Setting up libnpth0:amd64 (1.6-3build1) ... Setting up bzip2 (1.0.8-4ubuntu4) ... Setting up libfakeroot:amd64 (1.25.3-1.1ubuntu3) ... Setting up fakeroot (1.25.3-1.1ubuntu3) ... Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... rehash: warning: skipping ca-certificates.crt,it does not contain exactly one certificate or CRL 7 added, 8 removed; done. Setting up make (4.3-4ubuntu2) ... Setting up libmpfr6:amd64 (4.1.0-3build2) ... Setting up optipng (0.7.7-2) ... Setting up libncurses6:amd64 (6.2+20210905-1) ... Setting up xz-utils (5.2.5-2build1) ... Setting up libmpc3:amd64 (1.2.1-1) ... Setting up lockfile-progs (0.1.19) ... Setting up patch (2.7.6-7build1) ... Setting up libncursesw6:amd64 (6.2+20210905-1) ... Setting up mount (2.36.1-8ubuntu2) ... Setting up sensible-utils (0.0.17) ... Setting up libcrypt-dev:amd64 (1:4.4.18-4ubuntu2) ... Setting up mawk (1.3.4.20200120-2build1) ... Setting up libisl23:amd64 (0.24-2) ... Setting up libjson-c5:amd64 (0.15-2build3) ... Setting up readline-common (8.1-2build1) ... Setting up libgdbm6:amd64 (1.21-1) ... Setting up pinentry-curses (1.1.1-1build1) ... Setting up libreadline8:amd64 (8.1-2build1) ... Setting up libgdbm-compat4:amd64 (1.21-1) ... Processing triggers for libc-bin (2.34-0ubuntu3) ... Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-22300116 amd64 jammy-proposed -c chroot:build-PACKAGEBUILD-22300116 --arch=amd64 --dist=jammy-proposed --nolog -A mpb_1.11.1-4.dsc Initiating build PACKAGEBUILD-22300116 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-159-generic #167-Ubuntu SMP Tue Sep 21 08:55:05 UTC 2021 x86_64 sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on lgw01-amd64-003.buildd +==============================================================================+ | mpb 1.11.1-4 (amd64) Tue, 19 Oct 2021 03:54:12 +0000 | +==============================================================================+ Package: mpb Version: 1.11.1-4 Source Version: 1.11.1-4 Distribution: jammy-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-22300116/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- mpb_1.11.1-4.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/mpb-wMupfj/mpb-1.11.1' with '<>' I: NOTICE: Log filtering will replace 'build/mpb-wMupfj' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-fG0qFB/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-fG0qFB/apt_archive ./ InRelease Get:2 copy:/<>/resolver-fG0qFB/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-fG0qFB/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-fG0qFB/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-fG0qFB/apt_archive ./ Packages [431 B] Fetched 1737 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 650 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-fG0qFB/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [650 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 650 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 13260 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), liblapack-dev, libfftw3-dev (>= 3.3), libctl-dev (>= 4.3.0), gfortran, guile-3.0-dev, mpi-default-dev, libhdf5-mpi-dev, libfftw3-mpi-dev, quilt Filtered Build-Depends: debhelper-compat (= 12), liblapack-dev, libfftw3-dev (>= 3.3), libctl-dev (>= 4.3.0), gfortran, guile-3.0-dev, mpi-default-dev, libhdf5-mpi-dev, libfftw3-mpi-dev, quilt dpkg-deb: building package 'sbuild-build-depends-mpb-dummy' in '/<>/resolver-fG0qFB/apt_archive/sbuild-build-depends-mpb-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-mpb-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-fG0qFB/apt_archive ./ InRelease Get:2 copy:/<>/resolver-fG0qFB/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-fG0qFB/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-fG0qFB/apt_archive ./ Sources [557 B] Get:5 copy:/<>/resolver-fG0qFB/apt_archive ./ Packages [638 B] Fetched 2158 B in 0s (203 kB/s) Reading package lists... Reading package lists... Install mpb build dependencies (apt-based resolver) --------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-strip-nondeterminism diffstat dwz ed file gettext gettext-base gfortran gfortran-11 groff-base guile-2.2 guile-2.2-dev guile-2.2-libs guile-3.0 guile-3.0-dev guile-3.0-libs ibverbs-providers intltool-debian libaec-dev libaec0 libarchive-zip-perl libblas-dev libblas3 libbrotli1 libbsd0 libcbor0.6 libctl-dev libctl7 libcurl4 libcurl4-openssl-dev libdebhelper-perl libdw1 libedit2 libelf1 libevent-2.1-7 libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libfido2-1 libfile-stripnondeterminism-perl libgc-dev libgc1 libgfortran-11-dev libgfortran5 libglib2.0-0 libgmp-dev libgmpxx4ldbl libhdf5-mpi-dev libhdf5-openmpi-103-1 libhdf5-openmpi-cpp-103-1 libhdf5-openmpi-dev libhdf5-openmpi-fortran-102 libhdf5-openmpi-hl-100 libhdf5-openmpi-hl-cpp-100 libhdf5-openmpi-hl-fortran-100 libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libicu67 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-jquery-ui liblapack-dev liblapack3 libldap-2.5-0 libltdl-dev libltdl7 libmagic-mgc libmagic1 libmd0 libncurses-dev libncurses5-dev libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpciaccess0 libpipeline1 libpmix-dev libpmix2 libpsl5 libpsm-infinipath1 libpsm2-2 librdmacm1 libreadline-dev librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libssl-dev libsub-override-perl libsz2 libtool libuchardet0 libucx0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 m4 man-db mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client pkg-config po-debconf quilt zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-11-multilib gfortran-11-doc libcoarrays-dev groff guile-2.2-doc guile-3.0-doc liblapack-doc libcurl4-doc libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev libfftw3-doc gmp-doc libgmp10-doc libmpfr-dev libhdf5-doc libhwloc-contrib-plugins libjs-jquery-ui-docs libtool-doc ncurses-doc openmpi-doc pciutils readline-doc libssl-doc gcj-jdk m4-doc apparmor less www-browser opencl-icd keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl default-mta | mail-transport-agent graphviz procmail Recommended packages: curl | wget | lynx libctl-doc libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs javascript-common libldap-common libcoarrays-openmpi-dev publicsuffix libsasl2-modules xauth libmail-sendmail-perl less The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-strip-nondeterminism diffstat dwz ed file gettext gettext-base gfortran gfortran-11 groff-base guile-2.2 guile-2.2-dev guile-2.2-libs guile-3.0 guile-3.0-dev guile-3.0-libs ibverbs-providers intltool-debian libaec-dev libaec0 libarchive-zip-perl libblas-dev libblas3 libbrotli1 libbsd0 libcbor0.6 libctl-dev libctl7 libcurl4 libcurl4-openssl-dev libdebhelper-perl libdw1 libedit2 libelf1 libevent-2.1-7 libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libfido2-1 libfile-stripnondeterminism-perl libgc-dev libgc1 libgfortran-11-dev libgfortran5 libglib2.0-0 libgmp-dev libgmpxx4ldbl libhdf5-mpi-dev libhdf5-openmpi-103-1 libhdf5-openmpi-cpp-103-1 libhdf5-openmpi-dev libhdf5-openmpi-fortran-102 libhdf5-openmpi-hl-100 libhdf5-openmpi-hl-cpp-100 libhdf5-openmpi-hl-fortran-100 libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libicu67 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-jquery-ui liblapack-dev liblapack3 libldap-2.5-0 libltdl-dev libltdl7 libmagic-mgc libmagic1 libmd0 libncurses-dev libncurses5-dev libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpciaccess0 libpipeline1 libpmix-dev libpmix2 libpsl5 libpsm-infinipath1 libpsm2-2 librdmacm1 libreadline-dev librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libssl-dev libsub-override-perl libsz2 libtool libuchardet0 libucx0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 m4 man-db mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client pkg-config po-debconf quilt sbuild-build-depends-mpb-dummy zlib1g-dev 0 upgraded, 146 newly installed, 0 to remove and 0 not upgraded. Need to get 125 MB of archives. After this operation, 496 MB of additional disk space will be used. Get:1 copy:/<>/resolver-fG0qFB/apt_archive ./ sbuild-build-depends-mpb-dummy 0.invalid.0 [734 B] Get:2 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 bsdextrautils amd64 2.36.1-8ubuntu2 [75.0 kB] Get:3 http://ftpmaster.internal/ubuntu jammy/main amd64 libuchardet0 amd64 0.0.7-1build1 [76.7 kB] Get:4 http://ftpmaster.internal/ubuntu jammy/main amd64 groff-base amd64 1.22.4-7 [956 kB] Get:5 http://ftpmaster.internal/ubuntu jammy/main amd64 libpipeline1 amd64 1.5.3-1build1 [23.2 kB] Get:6 http://ftpmaster.internal/ubuntu jammy/main amd64 man-db amd64 2.9.4-2build1 [1180 kB] Get:7 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libmd0 amd64 1.0.4-1 [22.9 kB] Get:8 http://ftpmaster.internal/ubuntu jammy/main amd64 libbsd0 amd64 0.11.3-1ubuntu3 [44.7 kB] Get:9 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libelf1 amd64 0.185-2 [51.3 kB] Get:10 http://ftpmaster.internal/ubuntu jammy/main amd64 libglib2.0-0 amd64 2.68.4-1ubuntu1 [1424 kB] Get:11 http://ftpmaster.internal/ubuntu jammy/main amd64 libicu67 amd64 67.1-7ubuntu1 [10.1 MB] Get:12 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libxml2 amd64 2.9.12+dfsg-5 [761 kB] Get:13 http://ftpmaster.internal/ubuntu jammy/main amd64 ed amd64 1.17-1build1 [53.7 kB] Get:14 http://ftpmaster.internal/ubuntu jammy/main amd64 libmagic-mgc amd64 1:5.39-3build1 [236 kB] Get:15 http://ftpmaster.internal/ubuntu jammy/main amd64 libmagic1 amd64 1:5.39-3build1 [88.7 kB] Get:16 http://ftpmaster.internal/ubuntu jammy/main amd64 file amd64 1:5.39-3build1 [24.5 kB] Get:17 http://ftpmaster.internal/ubuntu jammy/main amd64 gettext-base amd64 0.21-4ubuntu3 [36.6 kB] Get:18 http://ftpmaster.internal/ubuntu jammy/main amd64 libcbor0.6 amd64 0.6.0-0ubuntu4 [23.9 kB] Get:19 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libedit2 amd64 3.1-20210910-1 [96.5 kB] Get:20 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libfido2-1 amd64 1.8.0-1 [70.2 kB] Get:21 http://ftpmaster.internal/ubuntu jammy/main amd64 libnuma1 amd64 2.0.14-0ubuntu3 [23.0 kB] Get:22 http://ftpmaster.internal/ubuntu jammy/main amd64 libpsl5 amd64 0.21.0-1.2build1 [57.5 kB] Get:23 http://ftpmaster.internal/ubuntu jammy/main amd64 libxau6 amd64 1:1.0.9-1build4 [7654 B] Get:24 http://ftpmaster.internal/ubuntu jammy/main amd64 libxdmcp6 amd64 1:1.1.3-0ubuntu4 [11.0 kB] Get:25 http://ftpmaster.internal/ubuntu jammy/main amd64 libxcb1 amd64 1.14-3ubuntu2 [49.1 kB] Get:26 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libx11-data all 2:1.7.2-2 [123 kB] Get:27 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libx11-6 amd64 2:1.7.2-2 [664 kB] Get:28 http://ftpmaster.internal/ubuntu jammy/main amd64 libxext6 amd64 2:1.3.4-0ubuntu4 [31.1 kB] Get:29 http://ftpmaster.internal/ubuntu jammy/main amd64 openssh-client amd64 1:8.4p1-6ubuntu2 [771 kB] Get:30 http://ftpmaster.internal/ubuntu jammy/main amd64 libsigsegv2 amd64 2.13-1ubuntu2 [14.6 kB] Get:31 http://ftpmaster.internal/ubuntu jammy/main amd64 m4 amd64 1.4.18-5ubuntu1 [199 kB] Get:32 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 autoconf all 2.71-2 [338 kB] Get:33 http://ftpmaster.internal/ubuntu jammy/main amd64 autotools-dev all 20180224.1+nmu1 [39.4 kB] Get:34 http://ftpmaster.internal/ubuntu jammy/main amd64 automake all 1:1.16.4-2 [557 kB] Get:35 http://ftpmaster.internal/ubuntu jammy/main amd64 autopoint all 0.21-4ubuntu3 [422 kB] Get:36 http://ftpmaster.internal/ubuntu jammy/main amd64 libdebhelper-perl all 13.3.4ubuntu2 [62.5 kB] Get:37 http://ftpmaster.internal/ubuntu jammy/main amd64 libtool all 2.4.6-15build1 [164 kB] Get:38 http://ftpmaster.internal/ubuntu jammy/main amd64 dh-autoreconf all 20 [16.1 kB] Get:39 http://ftpmaster.internal/ubuntu jammy/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:40 http://ftpmaster.internal/ubuntu jammy/main amd64 libsub-override-perl all 0.09-2 [9532 B] Get:41 http://ftpmaster.internal/ubuntu jammy/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [17.5 kB] Get:42 http://ftpmaster.internal/ubuntu jammy/main amd64 dh-strip-nondeterminism all 1.12.0-1 [5228 B] Get:43 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libdw1 amd64 0.185-2 [249 kB] Get:44 http://ftpmaster.internal/ubuntu jammy/main amd64 debugedit amd64 1:5.0-0ubuntu2 [47.9 kB] Get:45 http://ftpmaster.internal/ubuntu jammy/main amd64 dwz amd64 0.14-1build1 [104 kB] Get:46 http://ftpmaster.internal/ubuntu jammy/main amd64 gettext amd64 0.21-4ubuntu3 [824 kB] Get:47 http://ftpmaster.internal/ubuntu jammy/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:48 http://ftpmaster.internal/ubuntu jammy/main amd64 po-debconf all 1.0.21+nmu1 [233 kB] Get:49 http://ftpmaster.internal/ubuntu jammy/main amd64 debhelper all 13.3.4ubuntu2 [921 kB] Get:50 http://ftpmaster.internal/ubuntu jammy/main amd64 diffstat amd64 1.64-1build1 [29.1 kB] Get:51 http://ftpmaster.internal/ubuntu jammy/main amd64 libgfortran5 amd64 11.2.0-7ubuntu2 [793 kB] Get:52 http://ftpmaster.internal/ubuntu jammy/main amd64 libgfortran-11-dev amd64 11.2.0-7ubuntu2 [841 kB] Get:53 http://ftpmaster.internal/ubuntu jammy/main amd64 gfortran-11 amd64 11.2.0-7ubuntu2 [55.5 MB] Get:54 http://ftpmaster.internal/ubuntu jammy/main amd64 gfortran amd64 4:11.2.0-1ubuntu1 [1182 B] Get:55 http://ftpmaster.internal/ubuntu jammy/main amd64 libgc1 amd64 1:8.0.4-3build1 [96.1 kB] Get:56 http://ftpmaster.internal/ubuntu jammy/main amd64 libltdl7 amd64 2.4.6-15build1 [39.7 kB] Get:57 http://ftpmaster.internal/ubuntu jammy/main amd64 guile-2.2-libs amd64 2.2.7+1-6build1 [5811 kB] Get:58 http://ftpmaster.internal/ubuntu jammy/main amd64 guile-2.2 amd64 2.2.7+1-6build1 [7570 B] Get:59 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libncurses-dev amd64 6.2+20210905-1 [380 kB] Get:60 http://ftpmaster.internal/ubuntu jammy-proposed/main amd64 libncurses5-dev amd64 6.2+20210905-1 [792 B] Get:61 http://ftpmaster.internal/ubuntu jammy/main amd64 libreadline-dev amd64 8.1-2build1 [166 kB] Get:62 http://ftpmaster.internal/ubuntu jammy/main amd64 libltdl-dev amd64 2.4.6-15build1 [167 kB] Get:63 http://ftpmaster.internal/ubuntu jammy/main amd64 libgmpxx4ldbl amd64 2:6.2.1+dfsg-1ubuntu3 [9628 B] Get:64 http://ftpmaster.internal/ubuntu jammy/main amd64 libgmp-dev amd64 2:6.2.1+dfsg-1ubuntu3 [337 kB] Get:65 http://ftpmaster.internal/ubuntu jammy/main amd64 libgc-dev amd64 1:8.0.4-3build1 [258 kB] Get:66 http://ftpmaster.internal/ubuntu jammy/main amd64 pkg-config amd64 0.29.2-1ubuntu2 [48.2 kB] Get:67 http://ftpmaster.internal/ubuntu jammy/main amd64 guile-2.2-dev amd64 2.2.7+1-6build1 [672 kB] Get:68 http://ftpmaster.internal/ubuntu jammy/universe amd64 guile-3.0-libs amd64 3.0.5-4build1 [7486 kB] Get:69 http://ftpmaster.internal/ubuntu jammy/universe amd64 guile-3.0 amd64 3.0.5-4build1 [7552 B] Get:70 http://ftpmaster.internal/ubuntu jammy/universe amd64 guile-3.0-dev amd64 3.0.5-4build1 [689 kB] Get:71 http://ftpmaster.internal/ubuntu jammy/main amd64 libnl-3-200 amd64 3.4.0-1build3 [58.6 kB] Get:72 http://ftpmaster.internal/ubuntu jammy/main amd64 libnl-route-3-200 amd64 3.4.0-1build3 [168 kB] Get:73 http://ftpmaster.internal/ubuntu jammy/main amd64 libibverbs1 amd64 33.2-1ubuntu2 [63.6 kB] Get:74 http://ftpmaster.internal/ubuntu jammy/main amd64 ibverbs-providers amd64 33.2-1ubuntu2 [273 kB] Get:75 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 libaec0 amd64 1.0.6-1 [20.1 kB] Get:76 http://ftpmaster.internal/ubuntu jammy/main amd64 libblas3 amd64 3.9.0-3ubuntu3 [225 kB] Get:77 http://ftpmaster.internal/ubuntu jammy/main amd64 libblas-dev amd64 3.9.0-3ubuntu3 [161 kB] Get:78 http://ftpmaster.internal/ubuntu jammy/main amd64 libbrotli1 amd64 1.0.9-2build4 [315 kB] Get:79 http://ftpmaster.internal/ubuntu jammy/universe amd64 libctl7 amd64 4.5.0-9 [115 kB] Get:80 http://ftpmaster.internal/ubuntu jammy/universe amd64 libctl-dev amd64 4.5.0-9 [97.4 kB] Get:81 http://ftpmaster.internal/ubuntu jammy/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2.1build1 [14.6 kB] Get:82 http://ftpmaster.internal/ubuntu jammy/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2.1build1 [46.1 kB] Get:83 http://ftpmaster.internal/ubuntu jammy/main amd64 libldap-2.5-0 amd64 2.5.6+dfsg-1~exp1ubuntu1 [186 kB] Get:84 http://ftpmaster.internal/ubuntu jammy/main amd64 libnghttp2-14 amd64 1.43.0-1build1 [76.2 kB] Get:85 http://ftpmaster.internal/ubuntu jammy/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2build3 [58.3 kB] Get:86 http://ftpmaster.internal/ubuntu jammy/main amd64 libssh-4 amd64 0.9.6-1 [185 kB] Get:87 http://ftpmaster.internal/ubuntu jammy/main amd64 libcurl4 amd64 7.74.0-1.3ubuntu2 [273 kB] Get:88 http://ftpmaster.internal/ubuntu jammy/main amd64 libcurl4-openssl-dev amd64 7.74.0-1.3ubuntu2 [365 kB] Get:89 http://ftpmaster.internal/ubuntu jammy/main amd64 libevent-2.1-7 amd64 2.1.12-stable-1build1 [148 kB] Get:90 http://ftpmaster.internal/ubuntu jammy/main amd64 libevent-core-2.1-7 amd64 2.1.12-stable-1build1 [94.1 kB] Get:91 http://ftpmaster.internal/ubuntu jammy/main amd64 libevent-extra-2.1-7 amd64 2.1.12-stable-1build1 [65.4 kB] Get:92 http://ftpmaster.internal/ubuntu jammy/main amd64 libevent-pthreads-2.1-7 amd64 2.1.12-stable-1build1 [7650 B] Get:93 http://ftpmaster.internal/ubuntu jammy/main amd64 libevent-openssl-2.1-7 amd64 2.1.12-stable-1build1 [15.7 kB] Get:94 http://ftpmaster.internal/ubuntu jammy/main amd64 libevent-dev amd64 2.1.12-stable-1build1 [278 kB] Get:95 http://ftpmaster.internal/ubuntu jammy/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.1 [170 kB] Get:96 http://ftpmaster.internal/ubuntu jammy/universe amd64 libpsm2-2 amd64 11.2.185-1 [182 kB] Get:97 http://ftpmaster.internal/ubuntu jammy/main amd64 librdmacm1 amd64 33.2-1ubuntu2 [71.2 kB] Get:98 http://ftpmaster.internal/ubuntu jammy/universe amd64 libfabric1 amd64 1.11.0-2 [522 kB] Get:99 http://ftpmaster.internal/ubuntu jammy/main amd64 libfftw3-double3 amd64 3.3.8-2ubuntu7 [680 kB] Get:100 http://ftpmaster.internal/ubuntu jammy/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu7 [292 kB] Get:101 http://ftpmaster.internal/ubuntu jammy/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu7 [643 kB] Get:102 http://ftpmaster.internal/ubuntu jammy/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu7 [703 kB] Get:103 http://ftpmaster.internal/ubuntu jammy/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu7 [29.2 kB] Get:104 http://ftpmaster.internal/ubuntu jammy/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu7 [2162 kB] Get:105 http://ftpmaster.internal/ubuntu jammy/universe amd64 libhwloc15 amd64 2.4.1+dfsg-1 [144 kB] Get:106 http://ftpmaster.internal/ubuntu jammy/main amd64 libpciaccess0 amd64 0.16-1build3 [19.1 kB] Get:107 http://ftpmaster.internal/ubuntu jammy/main amd64 libxnvctrl0 amd64 470.57.01-0ubuntu3 [11.3 kB] Get:108 http://ftpmaster.internal/ubuntu jammy/universe amd64 ocl-icd-libopencl1 amd64 2.2.14-2 [35.4 kB] Get:109 http://ftpmaster.internal/ubuntu jammy/universe amd64 libhwloc-plugins amd64 2.4.1+dfsg-1 [14.8 kB] Get:110 http://ftpmaster.internal/ubuntu jammy/universe amd64 libpmix2 amd64 4.1.0-3ubuntu2 [594 kB] Get:111 http://ftpmaster.internal/ubuntu jammy/universe amd64 libucx0 amd64 1.10.1~rc1+really.1.10.0-1 [647 kB] Get:112 http://ftpmaster.internal/ubuntu jammy/universe amd64 libopenmpi3 amd64 4.1.0-10ubuntu1 [2553 kB] Get:113 http://ftpmaster.internal/ubuntu jammy/universe amd64 libfftw3-mpi3 amd64 3.3.8-2ubuntu7 [46.0 kB] Get:114 http://ftpmaster.internal/ubuntu jammy/universe amd64 libfftw3-mpi-dev amd64 3.3.8-2ubuntu7 [47.4 kB] Get:115 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 libsz2 amd64 1.0.6-1 [5354 B] Get:116 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 libhdf5-openmpi-103-1 amd64 1.10.7+repack-4 [1345 kB] Get:117 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 libhdf5-openmpi-cpp-103-1 amd64 1.10.7+repack-4 [129 kB] Get:118 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 libhdf5-openmpi-fortran-102 amd64 1.10.7+repack-4 [90.4 kB] Get:119 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 libhdf5-openmpi-hl-100 amd64 1.10.7+repack-4 [58.8 kB] Get:120 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 libhdf5-openmpi-hl-cpp-100 amd64 1.10.7+repack-4 [10.7 kB] Get:121 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 libhdf5-openmpi-hl-fortran-100 amd64 1.10.7+repack-4 [33.6 kB] Get:122 http://ftpmaster.internal/ubuntu jammy/main amd64 libjpeg-turbo8 amd64 2.0.6-0ubuntu3 [128 kB] Get:123 http://ftpmaster.internal/ubuntu jammy/main amd64 libjpeg-turbo8-dev amd64 2.0.6-0ubuntu3 [251 kB] Get:124 http://ftpmaster.internal/ubuntu jammy/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] Get:125 http://ftpmaster.internal/ubuntu jammy/main amd64 libjpeg8-dev amd64 8c-2ubuntu8 [1552 B] Get:126 http://ftpmaster.internal/ubuntu jammy/main amd64 libjpeg-dev amd64 8c-2ubuntu8 [1546 B] Get:127 http://ftpmaster.internal/ubuntu jammy/main amd64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [314 kB] Get:128 http://ftpmaster.internal/ubuntu jammy/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-8 [231 kB] Get:129 http://ftpmaster.internal/ubuntu jammy/main amd64 liblapack3 amd64 3.9.0-3ubuntu3 [2458 kB] Get:130 http://ftpmaster.internal/ubuntu jammy/main amd64 liblapack-dev amd64 3.9.0-3ubuntu3 [4667 kB] Get:131 http://ftpmaster.internal/ubuntu jammy/main amd64 libnl-3-dev amd64 3.4.0-1build3 [99.8 kB] Get:132 http://ftpmaster.internal/ubuntu jammy/main amd64 libnl-route-3-dev amd64 3.4.0-1build3 [188 kB] Get:133 http://ftpmaster.internal/ubuntu jammy/main amd64 libnuma-dev amd64 2.0.14-0ubuntu3 [35.7 kB] Get:134 http://ftpmaster.internal/ubuntu jammy/universe amd64 libhwloc-dev amd64 2.4.1+dfsg-1 [224 kB] Get:135 http://ftpmaster.internal/ubuntu jammy/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2ubuntu7 [164 kB] Get:136 http://ftpmaster.internal/ubuntu jammy/universe amd64 libpmix-dev amd64 4.1.0-3ubuntu2 [782 kB] Get:137 http://ftpmaster.internal/ubuntu jammy/main amd64 libssl-dev amd64 1.1.1l-1ubuntu1 [1731 kB] Get:138 http://ftpmaster.internal/ubuntu jammy/universe amd64 openmpi-common all 4.1.0-10ubuntu1 [159 kB] Get:139 http://ftpmaster.internal/ubuntu jammy/universe amd64 openmpi-bin amd64 4.1.0-10ubuntu1 [115 kB] Get:140 http://ftpmaster.internal/ubuntu jammy/universe amd64 quilt all 0.66-2.1 [304 kB] Get:141 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 libaec-dev amd64 1.0.6-1 [17.9 kB] Get:142 http://ftpmaster.internal/ubuntu jammy/main amd64 libibverbs-dev amd64 33.2-1ubuntu2 [517 kB] Get:143 http://ftpmaster.internal/ubuntu jammy/universe amd64 libopenmpi-dev amd64 4.1.0-10ubuntu1 [1059 kB] Get:144 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 libhdf5-openmpi-dev amd64 1.10.7+repack-4 [2750 kB] Get:145 http://ftpmaster.internal/ubuntu jammy/universe amd64 mpi-default-dev amd64 1.14 [3698 B] Get:146 http://ftpmaster.internal/ubuntu jammy-proposed/universe amd64 libhdf5-mpi-dev amd64 1.10.7+repack-4 [4608 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 125 MB in 3s (45.6 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 13260 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-8ubuntu2_amd64.deb ... Unpacking bsdextrautils (2.36.1-8ubuntu2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1build1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1build1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-7_amd64.deb ... Unpacking groff-base (1.22.4-7) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1build1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1build1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.4-2build1_amd64.deb ... Unpacking man-db (2.9.4-2build1) ... Selecting previously unselected package libmd0:amd64. Preparing to unpack .../005-libmd0_1.0.4-1_amd64.deb ... Unpacking libmd0:amd64 (1.0.4-1) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../006-libbsd0_0.11.3-1ubuntu3_amd64.deb ... Unpacking libbsd0:amd64 (0.11.3-1ubuntu3) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../007-libelf1_0.185-2_amd64.deb ... Unpacking libelf1:amd64 (0.185-2) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../008-libglib2.0-0_2.68.4-1ubuntu1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.68.4-1ubuntu1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../009-libicu67_67.1-7ubuntu1_amd64.deb ... Unpacking libicu67:amd64 (67.1-7ubuntu1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../010-libxml2_2.9.12+dfsg-5_amd64.deb ... Unpacking libxml2:amd64 (2.9.12+dfsg-5) ... Selecting previously unselected package ed. Preparing to unpack .../011-ed_1.17-1build1_amd64.deb ... Unpacking ed (1.17-1build1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../012-libmagic-mgc_1%3a5.39-3build1_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3build1) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../013-libmagic1_1%3a5.39-3build1_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3build1) ... Selecting previously unselected package file. Preparing to unpack .../014-file_1%3a5.39-3build1_amd64.deb ... Unpacking file (1:5.39-3build1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../015-gettext-base_0.21-4ubuntu3_amd64.deb ... Unpacking gettext-base (0.21-4ubuntu3) ... Selecting previously unselected package libcbor0.6:amd64. Preparing to unpack .../016-libcbor0.6_0.6.0-0ubuntu4_amd64.deb ... Unpacking libcbor0.6:amd64 (0.6.0-0ubuntu4) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../017-libedit2_3.1-20210910-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20210910-1) ... Selecting previously unselected package libfido2-1:amd64. Preparing to unpack .../018-libfido2-1_1.8.0-1_amd64.deb ... Unpacking libfido2-1:amd64 (1.8.0-1) ... Selecting previously unselected package libnuma1:amd64. Preparing to unpack .../019-libnuma1_2.0.14-0ubuntu3_amd64.deb ... Unpacking libnuma1:amd64 (2.0.14-0ubuntu3) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../020-libpsl5_0.21.0-1.2build1_amd64.deb ... Unpacking libpsl5:amd64 (0.21.0-1.2build1) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../021-libxau6_1%3a1.0.9-1build4_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1build4) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../022-libxdmcp6_1%3a1.1.3-0ubuntu4_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.3-0ubuntu4) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../023-libxcb1_1.14-3ubuntu2_amd64.deb ... Unpacking libxcb1:amd64 (1.14-3ubuntu2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../024-libx11-data_2%3a1.7.2-2_all.deb ... Unpacking libx11-data (2:1.7.2-2) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../025-libx11-6_2%3a1.7.2-2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.7.2-2) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../026-libxext6_2%3a1.3.4-0ubuntu4_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-0ubuntu4) ... Selecting previously unselected package openssh-client. Preparing to unpack .../027-openssh-client_1%3a8.4p1-6ubuntu2_amd64.deb ... Unpacking openssh-client (1:8.4p1-6ubuntu2) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../028-libsigsegv2_2.13-1ubuntu2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1ubuntu2) ... Selecting previously unselected package m4. Preparing to unpack .../029-m4_1.4.18-5ubuntu1_amd64.deb ... Unpacking m4 (1.4.18-5ubuntu1) ... Selecting previously unselected package autoconf. Preparing to unpack .../030-autoconf_2.71-2_all.deb ... Unpacking autoconf (2.71-2) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../031-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../032-automake_1%3a1.16.4-2_all.deb ... Unpacking automake (1:1.16.4-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../033-autopoint_0.21-4ubuntu3_all.deb ... Unpacking autopoint (0.21-4ubuntu3) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../034-libdebhelper-perl_13.3.4ubuntu2_all.deb ... Unpacking libdebhelper-perl (13.3.4ubuntu2) ... Selecting previously unselected package libtool. Preparing to unpack .../035-libtool_2.4.6-15build1_all.deb ... Unpacking libtool (2.4.6-15build1) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../036-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../037-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../038-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../039-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../040-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libdw1:amd64. Preparing to unpack .../041-libdw1_0.185-2_amd64.deb ... Unpacking libdw1:amd64 (0.185-2) ... Selecting previously unselected package debugedit. Preparing to unpack .../042-debugedit_1%3a5.0-0ubuntu2_amd64.deb ... Unpacking debugedit (1:5.0-0ubuntu2) ... Selecting previously unselected package dwz. Preparing to unpack .../043-dwz_0.14-1build1_amd64.deb ... Unpacking dwz (0.14-1build1) ... Selecting previously unselected package gettext. Preparing to unpack .../044-gettext_0.21-4ubuntu3_amd64.deb ... Unpacking gettext (0.21-4ubuntu3) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../045-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../046-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../047-debhelper_13.3.4ubuntu2_all.deb ... Unpacking debhelper (13.3.4ubuntu2) ... Selecting previously unselected package diffstat. Preparing to unpack .../048-diffstat_1.64-1build1_amd64.deb ... Unpacking diffstat (1.64-1build1) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../049-libgfortran5_11.2.0-7ubuntu2_amd64.deb ... Unpacking libgfortran5:amd64 (11.2.0-7ubuntu2) ... Selecting previously unselected package libgfortran-11-dev:amd64. Preparing to unpack .../050-libgfortran-11-dev_11.2.0-7ubuntu2_amd64.deb ... Unpacking libgfortran-11-dev:amd64 (11.2.0-7ubuntu2) ... Selecting previously unselected package gfortran-11. Preparing to unpack .../051-gfortran-11_11.2.0-7ubuntu2_amd64.deb ... Unpacking gfortran-11 (11.2.0-7ubuntu2) ... Selecting previously unselected package gfortran. Preparing to unpack .../052-gfortran_4%3a11.2.0-1ubuntu1_amd64.deb ... Unpacking gfortran (4:11.2.0-1ubuntu1) ... Selecting previously unselected package libgc1:amd64. Preparing to unpack .../053-libgc1_1%3a8.0.4-3build1_amd64.deb ... Unpacking libgc1:amd64 (1:8.0.4-3build1) ... Selecting previously unselected package libltdl7:amd64. Preparing to unpack .../054-libltdl7_2.4.6-15build1_amd64.deb ... Unpacking libltdl7:amd64 (2.4.6-15build1) ... Selecting previously unselected package guile-2.2-libs:amd64. Preparing to unpack .../055-guile-2.2-libs_2.2.7+1-6build1_amd64.deb ... Unpacking guile-2.2-libs:amd64 (2.2.7+1-6build1) ... Selecting previously unselected package guile-2.2. Preparing to unpack .../056-guile-2.2_2.2.7+1-6build1_amd64.deb ... Unpacking guile-2.2 (2.2.7+1-6build1) ... Selecting previously unselected package libncurses-dev:amd64. Preparing to unpack .../057-libncurses-dev_6.2+20210905-1_amd64.deb ... Unpacking libncurses-dev:amd64 (6.2+20210905-1) ... Selecting previously unselected package libncurses5-dev:amd64. Preparing to unpack .../058-libncurses5-dev_6.2+20210905-1_amd64.deb ... Unpacking libncurses5-dev:amd64 (6.2+20210905-1) ... Selecting previously unselected package libreadline-dev:amd64. Preparing to unpack .../059-libreadline-dev_8.1-2build1_amd64.deb ... Unpacking libreadline-dev:amd64 (8.1-2build1) ... Selecting previously unselected package libltdl-dev:amd64. Preparing to unpack .../060-libltdl-dev_2.4.6-15build1_amd64.deb ... Unpacking libltdl-dev:amd64 (2.4.6-15build1) ... Selecting previously unselected package libgmpxx4ldbl:amd64. Preparing to unpack .../061-libgmpxx4ldbl_2%3a6.2.1+dfsg-1ubuntu3_amd64.deb ... Unpacking libgmpxx4ldbl:amd64 (2:6.2.1+dfsg-1ubuntu3) ... Selecting previously unselected package libgmp-dev:amd64. Preparing to unpack .../062-libgmp-dev_2%3a6.2.1+dfsg-1ubuntu3_amd64.deb ... Unpacking libgmp-dev:amd64 (2:6.2.1+dfsg-1ubuntu3) ... Selecting previously unselected package libgc-dev:amd64. Preparing to unpack .../063-libgc-dev_1%3a8.0.4-3build1_amd64.deb ... Unpacking libgc-dev:amd64 (1:8.0.4-3build1) ... Selecting previously unselected package pkg-config. Preparing to unpack .../064-pkg-config_0.29.2-1ubuntu2_amd64.deb ... Unpacking pkg-config (0.29.2-1ubuntu2) ... Selecting previously unselected package guile-2.2-dev. Preparing to unpack .../065-guile-2.2-dev_2.2.7+1-6build1_amd64.deb ... Unpacking guile-2.2-dev (2.2.7+1-6build1) ... Selecting previously unselected package guile-3.0-libs:amd64. Preparing to unpack .../066-guile-3.0-libs_3.0.5-4build1_amd64.deb ... Unpacking guile-3.0-libs:amd64 (3.0.5-4build1) ... Selecting previously unselected package guile-3.0. Preparing to unpack .../067-guile-3.0_3.0.5-4build1_amd64.deb ... Unpacking guile-3.0 (3.0.5-4build1) ... Selecting previously unselected package guile-3.0-dev. Preparing to unpack .../068-guile-3.0-dev_3.0.5-4build1_amd64.deb ... Unpacking guile-3.0-dev (3.0.5-4build1) ... Selecting previously unselected package libnl-3-200:amd64. Preparing to unpack .../069-libnl-3-200_3.4.0-1build3_amd64.deb ... Unpacking libnl-3-200:amd64 (3.4.0-1build3) ... Selecting previously unselected package libnl-route-3-200:amd64. Preparing to unpack .../070-libnl-route-3-200_3.4.0-1build3_amd64.deb ... Unpacking libnl-route-3-200:amd64 (3.4.0-1build3) ... Selecting previously unselected package libibverbs1:amd64. Preparing to unpack .../071-libibverbs1_33.2-1ubuntu2_amd64.deb ... Unpacking libibverbs1:amd64 (33.2-1ubuntu2) ... Selecting previously unselected package ibverbs-providers:amd64. Preparing to unpack .../072-ibverbs-providers_33.2-1ubuntu2_amd64.deb ... Unpacking ibverbs-providers:amd64 (33.2-1ubuntu2) ... Selecting previously unselected package libaec0:amd64. Preparing to unpack .../073-libaec0_1.0.6-1_amd64.deb ... Unpacking libaec0:amd64 (1.0.6-1) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../074-libblas3_3.9.0-3ubuntu3_amd64.deb ... Unpacking libblas3:amd64 (3.9.0-3ubuntu3) ... Selecting previously unselected package libblas-dev:amd64. Preparing to unpack .../075-libblas-dev_3.9.0-3ubuntu3_amd64.deb ... Unpacking libblas-dev:amd64 (3.9.0-3ubuntu3) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../076-libbrotli1_1.0.9-2build4_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2build4) ... Selecting previously unselected package libctl7:amd64. Preparing to unpack .../077-libctl7_4.5.0-9_amd64.deb ... Unpacking libctl7:amd64 (4.5.0-9) ... Selecting previously unselected package libctl-dev:amd64. Preparing to unpack .../078-libctl-dev_4.5.0-9_amd64.deb ... Unpacking libctl-dev:amd64 (4.5.0-9) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../079-libsasl2-modules-db_2.1.27+dfsg-2.1build1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1build1) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../080-libsasl2-2_2.1.27+dfsg-2.1build1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27+dfsg-2.1build1) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../081-libldap-2.5-0_2.5.6+dfsg-1~exp1ubuntu1_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.6+dfsg-1~exp1ubuntu1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../082-libnghttp2-14_1.43.0-1build1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.43.0-1build1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../083-librtmp1_2.4+20151223.gitfa8646d.1-2build3_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2build3) ... Selecting previously unselected package libssh-4:amd64. Preparing to unpack .../084-libssh-4_0.9.6-1_amd64.deb ... Unpacking libssh-4:amd64 (0.9.6-1) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../085-libcurl4_7.74.0-1.3ubuntu2_amd64.deb ... Unpacking libcurl4:amd64 (7.74.0-1.3ubuntu2) ... Selecting previously unselected package libcurl4-openssl-dev:amd64. Preparing to unpack .../086-libcurl4-openssl-dev_7.74.0-1.3ubuntu2_amd64.deb ... Unpacking libcurl4-openssl-dev:amd64 (7.74.0-1.3ubuntu2) ... Selecting previously unselected package libevent-2.1-7:amd64. Preparing to unpack .../087-libevent-2.1-7_2.1.12-stable-1build1_amd64.deb ... Unpacking libevent-2.1-7:amd64 (2.1.12-stable-1build1) ... Selecting previously unselected package libevent-core-2.1-7:amd64. Preparing to unpack .../088-libevent-core-2.1-7_2.1.12-stable-1build1_amd64.deb ... Unpacking libevent-core-2.1-7:amd64 (2.1.12-stable-1build1) ... Selecting previously unselected package libevent-extra-2.1-7:amd64. Preparing to unpack .../089-libevent-extra-2.1-7_2.1.12-stable-1build1_amd64.deb ... Unpacking libevent-extra-2.1-7:amd64 (2.1.12-stable-1build1) ... Selecting previously unselected package libevent-pthreads-2.1-7:amd64. Preparing to unpack .../090-libevent-pthreads-2.1-7_2.1.12-stable-1build1_amd64.deb ... Unpacking libevent-pthreads-2.1-7:amd64 (2.1.12-stable-1build1) ... Selecting previously unselected package libevent-openssl-2.1-7:amd64. Preparing to unpack .../091-libevent-openssl-2.1-7_2.1.12-stable-1build1_amd64.deb ... Unpacking libevent-openssl-2.1-7:amd64 (2.1.12-stable-1build1) ... Selecting previously unselected package libevent-dev. Preparing to unpack .../092-libevent-dev_2.1.12-stable-1build1_amd64.deb ... Unpacking libevent-dev (2.1.12-stable-1build1) ... Selecting previously unselected package libpsm-infinipath1. Preparing to unpack .../093-libpsm-infinipath1_3.3+20.604758e7-6.1_amd64.deb ... Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.1) ... Selecting previously unselected package libpsm2-2. Preparing to unpack .../094-libpsm2-2_11.2.185-1_amd64.deb ... Unpacking libpsm2-2 (11.2.185-1) ... Selecting previously unselected package librdmacm1:amd64. Preparing to unpack .../095-librdmacm1_33.2-1ubuntu2_amd64.deb ... Unpacking librdmacm1:amd64 (33.2-1ubuntu2) ... Selecting previously unselected package libfabric1. Preparing to unpack .../096-libfabric1_1.11.0-2_amd64.deb ... Unpacking libfabric1 (1.11.0-2) ... Selecting previously unselected package libfftw3-double3:amd64. Preparing to unpack .../097-libfftw3-double3_3.3.8-2ubuntu7_amd64.deb ... Unpacking libfftw3-double3:amd64 (3.3.8-2ubuntu7) ... Selecting previously unselected package libfftw3-long3:amd64. Preparing to unpack .../098-libfftw3-long3_3.3.8-2ubuntu7_amd64.deb ... Unpacking libfftw3-long3:amd64 (3.3.8-2ubuntu7) ... Selecting previously unselected package libfftw3-quad3:amd64. Preparing to unpack .../099-libfftw3-quad3_3.3.8-2ubuntu7_amd64.deb ... Unpacking libfftw3-quad3:amd64 (3.3.8-2ubuntu7) ... Selecting previously unselected package libfftw3-single3:amd64. Preparing to unpack .../100-libfftw3-single3_3.3.8-2ubuntu7_amd64.deb ... Unpacking libfftw3-single3:amd64 (3.3.8-2ubuntu7) ... Selecting previously unselected package libfftw3-bin. Preparing to unpack .../101-libfftw3-bin_3.3.8-2ubuntu7_amd64.deb ... Unpacking libfftw3-bin (3.3.8-2ubuntu7) ... Selecting previously unselected package libfftw3-dev:amd64. Preparing to unpack .../102-libfftw3-dev_3.3.8-2ubuntu7_amd64.deb ... Unpacking libfftw3-dev:amd64 (3.3.8-2ubuntu7) ... Selecting previously unselected package libhwloc15:amd64. Preparing to unpack .../103-libhwloc15_2.4.1+dfsg-1_amd64.deb ... Unpacking libhwloc15:amd64 (2.4.1+dfsg-1) ... Selecting previously unselected package libpciaccess0:amd64. Preparing to unpack .../104-libpciaccess0_0.16-1build3_amd64.deb ... Unpacking libpciaccess0:amd64 (0.16-1build3) ... Selecting previously unselected package libxnvctrl0:amd64. Preparing to unpack .../105-libxnvctrl0_470.57.01-0ubuntu3_amd64.deb ... Unpacking libxnvctrl0:amd64 (470.57.01-0ubuntu3) ... Selecting previously unselected package ocl-icd-libopencl1:amd64. Preparing to unpack .../106-ocl-icd-libopencl1_2.2.14-2_amd64.deb ... Unpacking ocl-icd-libopencl1:amd64 (2.2.14-2) ... Selecting previously unselected package libhwloc-plugins:amd64. Preparing to unpack .../107-libhwloc-plugins_2.4.1+dfsg-1_amd64.deb ... Unpacking libhwloc-plugins:amd64 (2.4.1+dfsg-1) ... Selecting previously unselected package libpmix2:amd64. Preparing to unpack .../108-libpmix2_4.1.0-3ubuntu2_amd64.deb ... Unpacking libpmix2:amd64 (4.1.0-3ubuntu2) ... Selecting previously unselected package libucx0:amd64. Preparing to unpack .../109-libucx0_1.10.1~rc1+really.1.10.0-1_amd64.deb ... Unpacking libucx0:amd64 (1.10.1~rc1+really.1.10.0-1) ... Selecting previously unselected package libopenmpi3:amd64. Preparing to unpack .../110-libopenmpi3_4.1.0-10ubuntu1_amd64.deb ... Unpacking libopenmpi3:amd64 (4.1.0-10ubuntu1) ... Selecting previously unselected package libfftw3-mpi3:amd64. Preparing to unpack .../111-libfftw3-mpi3_3.3.8-2ubuntu7_amd64.deb ... Unpacking libfftw3-mpi3:amd64 (3.3.8-2ubuntu7) ... Selecting previously unselected package libfftw3-mpi-dev:amd64. Preparing to unpack .../112-libfftw3-mpi-dev_3.3.8-2ubuntu7_amd64.deb ... Unpacking libfftw3-mpi-dev:amd64 (3.3.8-2ubuntu7) ... Selecting previously unselected package libsz2:amd64. Preparing to unpack .../113-libsz2_1.0.6-1_amd64.deb ... Unpacking libsz2:amd64 (1.0.6-1) ... Selecting previously unselected package libhdf5-openmpi-103-1:amd64. Preparing to unpack .../114-libhdf5-openmpi-103-1_1.10.7+repack-4_amd64.deb ... Unpacking libhdf5-openmpi-103-1:amd64 (1.10.7+repack-4) ... Selecting previously unselected package libhdf5-openmpi-cpp-103-1:amd64. Preparing to unpack .../115-libhdf5-openmpi-cpp-103-1_1.10.7+repack-4_amd64.deb ... Unpacking libhdf5-openmpi-cpp-103-1:amd64 (1.10.7+repack-4) ... Selecting previously unselected package libhdf5-openmpi-fortran-102:amd64. Preparing to unpack .../116-libhdf5-openmpi-fortran-102_1.10.7+repack-4_amd64.deb ... Unpacking libhdf5-openmpi-fortran-102:amd64 (1.10.7+repack-4) ... Selecting previously unselected package libhdf5-openmpi-hl-100:amd64. Preparing to unpack .../117-libhdf5-openmpi-hl-100_1.10.7+repack-4_amd64.deb ... Unpacking libhdf5-openmpi-hl-100:amd64 (1.10.7+repack-4) ... Selecting previously unselected package libhdf5-openmpi-hl-cpp-100:amd64. Preparing to unpack .../118-libhdf5-openmpi-hl-cpp-100_1.10.7+repack-4_amd64.deb ... Unpacking libhdf5-openmpi-hl-cpp-100:amd64 (1.10.7+repack-4) ... Selecting previously unselected package libhdf5-openmpi-hl-fortran-100:amd64. Preparing to unpack .../119-libhdf5-openmpi-hl-fortran-100_1.10.7+repack-4_amd64.deb ... Unpacking libhdf5-openmpi-hl-fortran-100:amd64 (1.10.7+repack-4) ... Selecting previously unselected package libjpeg-turbo8:amd64. Preparing to unpack .../120-libjpeg-turbo8_2.0.6-0ubuntu3_amd64.deb ... Unpacking libjpeg-turbo8:amd64 (2.0.6-0ubuntu3) ... Selecting previously unselected package libjpeg-turbo8-dev:amd64. Preparing to unpack .../121-libjpeg-turbo8-dev_2.0.6-0ubuntu3_amd64.deb ... Unpacking libjpeg-turbo8-dev:amd64 (2.0.6-0ubuntu3) ... Selecting previously unselected package libjpeg8:amd64. Preparing to unpack .../122-libjpeg8_8c-2ubuntu8_amd64.deb ... Unpacking libjpeg8:amd64 (8c-2ubuntu8) ... Selecting previously unselected package libjpeg8-dev:amd64. Preparing to unpack .../123-libjpeg8-dev_8c-2ubuntu8_amd64.deb ... Unpacking libjpeg8-dev:amd64 (8c-2ubuntu8) ... Selecting previously unselected package libjpeg-dev:amd64. Preparing to unpack .../124-libjpeg-dev_8c-2ubuntu8_amd64.deb ... Unpacking libjpeg-dev:amd64 (8c-2ubuntu8) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../125-libjs-jquery_3.5.1+dfsg+~3.5.5-7_all.deb ... Unpacking libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../126-libjs-jquery-ui_1.12.1+dfsg-8_all.deb ... Unpacking libjs-jquery-ui (1.12.1+dfsg-8) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../127-liblapack3_3.9.0-3ubuntu3_amd64.deb ... Unpacking liblapack3:amd64 (3.9.0-3ubuntu3) ... Selecting previously unselected package liblapack-dev:amd64. Preparing to unpack .../128-liblapack-dev_3.9.0-3ubuntu3_amd64.deb ... Unpacking liblapack-dev:amd64 (3.9.0-3ubuntu3) ... Selecting previously unselected package libnl-3-dev:amd64. Preparing to unpack .../129-libnl-3-dev_3.4.0-1build3_amd64.deb ... Unpacking libnl-3-dev:amd64 (3.4.0-1build3) ... Selecting previously unselected package libnl-route-3-dev:amd64. Preparing to unpack .../130-libnl-route-3-dev_3.4.0-1build3_amd64.deb ... Unpacking libnl-route-3-dev:amd64 (3.4.0-1build3) ... Selecting previously unselected package libnuma-dev:amd64. Preparing to unpack .../131-libnuma-dev_2.0.14-0ubuntu3_amd64.deb ... Unpacking libnuma-dev:amd64 (2.0.14-0ubuntu3) ... Selecting previously unselected package libhwloc-dev:amd64. Preparing to unpack .../132-libhwloc-dev_2.4.1+dfsg-1_amd64.deb ... Unpacking libhwloc-dev:amd64 (2.4.1+dfsg-1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../133-zlib1g-dev_1%3a1.2.11.dfsg-2ubuntu7_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu7) ... Selecting previously unselected package libpmix-dev:amd64. Preparing to unpack .../134-libpmix-dev_4.1.0-3ubuntu2_amd64.deb ... Unpacking libpmix-dev:amd64 (4.1.0-3ubuntu2) ... Selecting previously unselected package libssl-dev:amd64. Preparing to unpack .../135-libssl-dev_1.1.1l-1ubuntu1_amd64.deb ... Unpacking libssl-dev:amd64 (1.1.1l-1ubuntu1) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../136-openmpi-common_4.1.0-10ubuntu1_all.deb ... Unpacking openmpi-common (4.1.0-10ubuntu1) ... Selecting previously unselected package openmpi-bin. Preparing to unpack .../137-openmpi-bin_4.1.0-10ubuntu1_amd64.deb ... Unpacking openmpi-bin (4.1.0-10ubuntu1) ... Selecting previously unselected package quilt. Preparing to unpack .../138-quilt_0.66-2.1_all.deb ... Unpacking quilt (0.66-2.1) ... Selecting previously unselected package libaec-dev:amd64. Preparing to unpack .../139-libaec-dev_1.0.6-1_amd64.deb ... Unpacking libaec-dev:amd64 (1.0.6-1) ... Selecting previously unselected package libibverbs-dev:amd64. Preparing to unpack .../140-libibverbs-dev_33.2-1ubuntu2_amd64.deb ... Unpacking libibverbs-dev:amd64 (33.2-1ubuntu2) ... Selecting previously unselected package libopenmpi-dev:amd64. Preparing to unpack .../141-libopenmpi-dev_4.1.0-10ubuntu1_amd64.deb ... Unpacking libopenmpi-dev:amd64 (4.1.0-10ubuntu1) ... Selecting previously unselected package libhdf5-openmpi-dev. Preparing to unpack .../142-libhdf5-openmpi-dev_1.10.7+repack-4_amd64.deb ... Unpacking libhdf5-openmpi-dev (1.10.7+repack-4) ... Selecting previously unselected package mpi-default-dev. Preparing to unpack .../143-mpi-default-dev_1.14_amd64.deb ... Unpacking mpi-default-dev (1.14) ... Selecting previously unselected package libhdf5-mpi-dev. Preparing to unpack .../144-libhdf5-mpi-dev_1.10.7+repack-4_amd64.deb ... Unpacking libhdf5-mpi-dev (1.10.7+repack-4) ... Selecting previously unselected package sbuild-build-depends-mpb-dummy. Preparing to unpack .../145-sbuild-build-depends-mpb-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-mpb-dummy (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.3-1build1) ... Setting up libpciaccess0:amd64 (0.16-1build3) ... Setting up libxau6:amd64 (1:1.0.9-1build4) ... Setting up libncurses-dev:amd64 (6.2+20210905-1) ... Setting up libpsl5:amd64 (0.21.0-1.2build1) ... Setting up libfftw3-single3:amd64 (3.3.8-2ubuntu7) ... Setting up bsdextrautils (2.36.1-8ubuntu2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-7ubuntu1) ... Setting up libmagic-mgc (1:5.39-3build1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:amd64 (2.68.4-1ubuntu1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.3.4ubuntu2) ... Setting up libbrotli1:amd64 (1.0.9-2build4) ... Setting up libnghttp2-14:amd64 (1.43.0-1build1) ... Setting up libmagic1:amd64 (1:5.39-3build1) ... Setting up libfftw3-long3:amd64 (3.3.8-2ubuntu7) ... Setting up gettext-base (0.21-4ubuntu3) ... Setting up file (1:5.39-3build1) ... Setting up libreadline-dev:amd64 (8.1-2build1) ... Setting up libcbor0.6:amd64 (0.6.0-0ubuntu4) ... Setting up libaec0:amd64 (1.0.6-1) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1build1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libblas3:amd64 (3.9.0-3ubuntu3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libgmpxx4ldbl:amd64 (2:6.2.1+dfsg-1ubuntu3) ... Setting up libx11-data (2:1.7.2-2) ... Setting up ed (1.17-1build1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2build3) ... Setting up libsigsegv2:amd64 (2.13-1ubuntu2) ... Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu7) ... Setting up diffstat (1.64-1build1) ... Setting up libssl-dev:amd64 (1.1.1l-1ubuntu1) ... Setting up libhwloc15:amd64 (2.4.1+dfsg-1) ... Setting up libevent-core-2.1-7:amd64 (2.1.12-stable-1build1) ... Setting up libevent-2.1-7:amd64 (2.1.12-stable-1build1) ... Setting up autopoint (0.21-4ubuntu3) ... Setting up pkg-config (0.29.2-1ubuntu2) ... Setting up libjpeg-turbo8:amd64 (2.0.6-0ubuntu3) ... Setting up libgc1:amd64 (1:8.0.4-3build1) ... Setting up libltdl7:amd64 (2.4.6-15build1) ... Setting up libfftw3-double3:amd64 (3.3.8-2ubuntu7) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2.1build1) ... Setting up libssh-4:amd64 (0.9.6-1) ... Setting up libgfortran5:amd64 (11.2.0-7ubuntu2) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu7) ... Setting up libnuma1:amd64 (2.0.14-0ubuntu3) ... Setting up libmd0:amd64 (1.0.4-1) ... Setting up ocl-icd-libopencl1:amd64 (2.2.14-2) ... Setting up libuchardet0:amd64 (0.0.7-1build1) ... Setting up libncurses5-dev:amd64 (6.2+20210905-1) ... Setting up libnl-3-200:amd64 (3.4.0-1build3) ... Setting up libpsm2-2 (11.2.185-1) ... Setting up openmpi-common (4.1.0-10ubuntu1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.1) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up libfido2-1:amd64 (1.8.0-1) ... Setting up libgc-dev:amd64 (1:8.0.4-3build1) ... Setting up libbsd0:amd64 (0.11.3-1ubuntu3) ... Setting up libelf1:amd64 (0.185-2) ... Setting up libxml2:amd64 (2.9.12+dfsg-5) ... Setting up guile-2.2-libs:amd64 (2.2.7+1-6build1) ... Setting up libblas-dev:amd64 (3.9.0-3ubuntu3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libsz2:amd64 (1.0.6-1) ... Setting up libevent-pthreads-2.1-7:amd64 (2.1.12-stable-1build1) ... Setting up libjpeg8:amd64 (8c-2ubuntu8) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libdw1:amd64 (0.185-2) ... Setting up libjpeg-turbo8-dev:amd64 (2.0.6-0ubuntu3) ... Setting up libxdmcp6:amd64 (1:1.1.3-0ubuntu4) ... Setting up libevent-extra-2.1-7:amd64 (2.1.12-stable-1build1) ... Setting up liblapack3:amd64 (3.9.0-3ubuntu3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.14-3ubuntu2) ... Setting up gettext (0.21-4ubuntu3) ... Setting up libgmp-dev:amd64 (2:6.2.1+dfsg-1ubuntu3) ... Setting up guile-2.2 (2.2.7+1-6build1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/guile/2.2/bin/guile to provide /usr/bin/guile (guile) in auto mode Setting up libtool (2.4.6-15build1) ... Setting up guile-3.0-libs:amd64 (3.0.5-4build1) ... Setting up libfftw3-bin (3.3.8-2ubuntu7) ... Setting up libgfortran-11-dev:amd64 (11.2.0-7ubuntu2) ... Setting up libedit2:amd64 (3.1-20210910-1) ... Setting up libaec-dev:amd64 (1.0.6-1) ... Setting up libevent-openssl-2.1-7:amd64 (2.1.12-stable-1build1) ... Setting up m4 (1.4.18-5ubuntu1) ... Setting up quilt (0.66-2.1) ... Setting up libldap-2.5-0:amd64 (2.5.6+dfsg-1~exp1ubuntu1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libnuma-dev:amd64 (2.0.14-0ubuntu3) ... Setting up libnl-route-3-200:amd64 (3.4.0-1build3) ... Setting up libctl7:amd64 (4.5.0-9) ... Setting up libjs-jquery-ui (1.12.1+dfsg-8) ... Setting up libevent-dev (2.1.12-stable-1build1) ... Setting up liblapack-dev:amd64 (3.9.0-3ubuntu3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up gfortran-11 (11.2.0-7ubuntu2) ... Setting up autoconf (2.71-2) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.14-1build1) ... Setting up libnl-3-dev:amd64 (3.4.0-1build3) ... Setting up groff-base (1.22.4-7) ... Setting up debugedit (1:5.0-0ubuntu2) ... Setting up libcurl4:amd64 (7.74.0-1.3ubuntu2) ... Setting up libx11-6:amd64 (2:1.7.2-2) ... Setting up libjpeg8-dev:amd64 (8c-2ubuntu8) ... Setting up guile-3.0 (3.0.5-4build1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/guile/3.0/bin/guile to provide /usr/bin/guile (guile) in auto mode Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu7) ... Setting up automake (1:1.16.4-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libibverbs1:amd64 (33.2-1ubuntu2) ... Setting up ibverbs-providers:amd64 (33.2-1ubuntu2) ... Setting up openssh-client (1:8.4p1-6ubuntu2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libjpeg-dev:amd64 (8c-2ubuntu8) ... Setting up libxext6:amd64 (2:1.3.4-0ubuntu4) ... Setting up man-db (2.9.4-2build1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up gfortran (4:11.2.0-1ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libxnvctrl0:amd64 (470.57.01-0ubuntu3) ... Setting up dh-autoreconf (20) ... Setting up libnl-route-3-dev:amd64 (3.4.0-1build3) ... Setting up libltdl-dev:amd64 (2.4.6-15build1) ... Setting up guile-2.2-dev (2.2.7+1-6build1) ... update-alternatives: using /usr/bin/guile-config-2.2 to provide /usr/bin/guile-config (guile-config) in auto mode update-alternatives: using /usr/share/aclocal/guile-2.2.m4 to provide /usr/share/aclocal/guile.m4 (guile-autoconf-macros) in auto mode Setting up libcurl4-openssl-dev:amd64 (7.74.0-1.3ubuntu2) ... Setting up libhwloc-dev:amd64 (2.4.1+dfsg-1) ... Setting up guile-3.0-dev (3.0.5-4build1) ... update-alternatives: using /usr/bin/guile-config-3.0 to provide /usr/bin/guile-config (guile-config) in auto mode update-alternatives: using /usr/share/aclocal/guile-3.0.m4 to provide /usr/share/aclocal/guile.m4 (guile-autoconf-macros) in auto mode Setting up librdmacm1:amd64 (33.2-1ubuntu2) ... Setting up libucx0:amd64 (1.10.1~rc1+really.1.10.0-1) ... Setting up debhelper (13.3.4ubuntu2) ... Setting up libibverbs-dev:amd64 (33.2-1ubuntu2) ... Setting up libhwloc-plugins:amd64 (2.4.1+dfsg-1) ... Setting up libctl-dev:amd64 (4.5.0-9) ... Setting up libfabric1 (1.11.0-2) ... Setting up libpmix2:amd64 (4.1.0-3ubuntu2) ... Setting up libopenmpi3:amd64 (4.1.0-10ubuntu1) ... Setting up libfftw3-mpi3:amd64 (3.3.8-2ubuntu7) ... Setting up libpmix-dev:amd64 (4.1.0-3ubuntu2) ... Setting up openmpi-bin (4.1.0-10ubuntu1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libhdf5-openmpi-103-1:amd64 (1.10.7+repack-4) ... Setting up libfftw3-mpi-dev:amd64 (3.3.8-2ubuntu7) ... Setting up libhdf5-openmpi-fortran-102:amd64 (1.10.7+repack-4) ... Setting up libhdf5-openmpi-hl-100:amd64 (1.10.7+repack-4) ... Setting up libopenmpi-dev:amd64 (4.1.0-10ubuntu1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libhdf5-openmpi-cpp-103-1:amd64 (1.10.7+repack-4) ... Setting up libhdf5-openmpi-hl-cpp-100:amd64 (1.10.7+repack-4) ... Setting up libhdf5-openmpi-hl-fortran-100:amd64 (1.10.7+repack-4) ... Setting up mpi-default-dev (1.14) ... Setting up libhdf5-openmpi-dev (1.10.7+repack-4) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libhdf5-mpi-dev (1.10.7+repack-4) ... Setting up sbuild-build-depends-mpb-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.34-0ubuntu3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-159-generic amd64 (x86_64) Toolchain package versions: binutils_2.37-7ubuntu1 dpkg-dev_1.20.9ubuntu2 g++-11_11.2.0-7ubuntu2 gcc-11_11.2.0-7ubuntu2 libc6-dev_2.34-0ubuntu3 libstdc++-11-dev_11.2.0-7ubuntu2 libstdc++6_11.2.0-7ubuntu2 linux-libc-dev_5.13.0-19.19 Package versions: adduser_3.118ubuntu5 advancecomp_2.1-2.1ubuntu1 apt_2.3.9 autoconf_2.71-2 automake_1:1.16.4-2 autopoint_0.21-4ubuntu3 autotools-dev_20180224.1+nmu1 base-files_12ubuntu1 base-passwd_3.5.52 bash_5.1-3ubuntu2 binutils_2.37-7ubuntu1 binutils-common_2.37-7ubuntu1 binutils-x86-64-linux-gnu_2.37-7ubuntu1 bsdextrautils_2.36.1-8ubuntu2 bsdutils_1:2.36.1-8ubuntu2 build-essential_12.9ubuntu2 bzip2_1.0.8-4ubuntu4 ca-certificates_20211016 coreutils_8.32-4ubuntu3 cpp_4:11.2.0-1ubuntu1 cpp-11_11.2.0-7ubuntu2 dash_0.5.11+git20210120+802ebd4-1build1 debconf_1.5.77 debhelper_13.3.4ubuntu2 debianutils_5.5-1 debugedit_1:5.0-0ubuntu2 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-1 diffstat_1.64-1build1 diffutils_1:3.8-0ubuntu1 dpkg_1.20.9ubuntu2 dpkg-dev_1.20.9ubuntu2 dwz_0.14-1build1 e2fsprogs_1.46.3-1ubuntu3 ed_1.17-1build1 fakeroot_1.25.3-1.1ubuntu3 file_1:5.39-3build1 findutils_4.8.0-1ubuntu2 g++_4:11.2.0-1ubuntu1 g++-11_11.2.0-7ubuntu2 gcc_4:11.2.0-1ubuntu1 gcc-11_11.2.0-7ubuntu2 gcc-11-base_11.2.0-7ubuntu2 gettext_0.21-4ubuntu3 gettext-base_0.21-4ubuntu3 gfortran_4:11.2.0-1ubuntu1 gfortran-11_11.2.0-7ubuntu2 gpg_2.2.20-1ubuntu4 gpg-agent_2.2.20-1ubuntu4 gpgconf_2.2.20-1ubuntu4 gpgv_2.2.20-1ubuntu4 grep_3.7-0ubuntu1 groff-base_1.22.4-7 guile-2.2_2.2.7+1-6build1 guile-2.2-dev_2.2.7+1-6build1 guile-2.2-libs_2.2.7+1-6build1 guile-3.0_3.0.5-4build1 guile-3.0-dev_3.0.5-4build1 guile-3.0-libs_3.0.5-4build1 gzip_1.10-4ubuntu2 hostname_3.23ubuntu1 ibverbs-providers_33.2-1ubuntu2 init_1.60build1 init-system-helpers_1.60build1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-10ubuntu2 libaec-dev_1.0.6-1 libaec0_1.0.6-1 libapparmor1_3.0.3-0ubuntu2 libapt-pkg6.0_2.3.9 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2build22 libasan6_11.2.0-7ubuntu2 libassuan0_2.5.5-1 libatomic1_11.2.0-7ubuntu2 libattr1_1:2.5.1-1 libaudit-common_1:3.0-2ubuntu3 libaudit1_1:3.0-2ubuntu3 libbinutils_2.37-7ubuntu1 libblas-dev_3.9.0-3ubuntu3 libblas3_3.9.0-3ubuntu3 libblkid1_2.36.1-8ubuntu2 libbrotli1_1.0.9-2build4 libbsd0_0.11.3-1ubuntu3 libbz2-1.0_1.0.8-4ubuntu4 libc-bin_2.34-0ubuntu3 libc-dev-bin_2.34-0ubuntu3 libc6_2.34-0ubuntu3 libc6-dev_2.34-0ubuntu3 libcap-ng0_0.7.9-2.2build2 libcap2_1:2.44-1build2 libcbor0.6_0.6.0-0ubuntu4 libcc1-0_11.2.0-7ubuntu2 libcom-err2_1.46.3-1ubuntu3 libcrypt-dev_1:4.4.18-4ubuntu2 libcrypt1_1:4.4.18-4ubuntu2 libcryptsetup12_2:2.3.6-0ubuntu1 libctf-nobfd0_2.37-7ubuntu1 libctf0_2.37-7ubuntu1 libctl-dev_4.5.0-9 libctl7_4.5.0-9 libcurl4_7.74.0-1.3ubuntu2 libcurl4-openssl-dev_7.74.0-1.3ubuntu2 libdb5.3_5.3.28+dfsg1-0.8ubuntu2 libdebconfclient0_0.256ubuntu4 libdebhelper-perl_13.3.4ubuntu2 libdevmapper1.02.1_2:1.02.175-2.1ubuntu3 libdpkg-perl_1.20.9ubuntu2 libdw1_0.185-2 libedit2_3.1-20210910-1 libelf1_0.185-2 libevent-2.1-7_2.1.12-stable-1build1 libevent-core-2.1-7_2.1.12-stable-1build1 libevent-dev_2.1.12-stable-1build1 libevent-extra-2.1-7_2.1.12-stable-1build1 libevent-openssl-2.1-7_2.1.12-stable-1build1 libevent-pthreads-2.1-7_2.1.12-stable-1build1 libext2fs2_1.46.3-1ubuntu3 libfabric1_1.11.0-2 libfakeroot_1.25.3-1.1ubuntu3 libffi8_3.4.2-1ubuntu5 libfftw3-bin_3.3.8-2ubuntu7 libfftw3-dev_3.3.8-2ubuntu7 libfftw3-double3_3.3.8-2ubuntu7 libfftw3-long3_3.3.8-2ubuntu7 libfftw3-mpi-dev_3.3.8-2ubuntu7 libfftw3-mpi3_3.3.8-2ubuntu7 libfftw3-quad3_3.3.8-2ubuntu7 libfftw3-single3_3.3.8-2ubuntu7 libfido2-1_1.8.0-1 libfile-stripnondeterminism-perl_1.12.0-1 libgc-dev_1:8.0.4-3build1 libgc1_1:8.0.4-3build1 libgcc-11-dev_11.2.0-7ubuntu2 libgcc-s1_11.2.0-7ubuntu2 libgcrypt20_1.8.7-5ubuntu2 libgdbm-compat4_1.21-1 libgdbm6_1.21-1 libgfortran-11-dev_11.2.0-7ubuntu2 libgfortran5_11.2.0-7ubuntu2 libglib2.0-0_2.68.4-1ubuntu1 libgmp-dev_2:6.2.1+dfsg-1ubuntu3 libgmp10_2:6.2.1+dfsg-1ubuntu3 libgmpxx4ldbl_2:6.2.1+dfsg-1ubuntu3 libgnutls30_3.7.1-5ubuntu1 libgomp1_11.2.0-7ubuntu2 libgpg-error0_1.42-3 libgssapi-krb5-2_1.18.3-7 libhdf5-mpi-dev_1.10.7+repack-4 libhdf5-openmpi-103-1_1.10.7+repack-4 libhdf5-openmpi-cpp-103-1_1.10.7+repack-4 libhdf5-openmpi-dev_1.10.7+repack-4 libhdf5-openmpi-fortran-102_1.10.7+repack-4 libhdf5-openmpi-hl-100_1.10.7+repack-4 libhdf5-openmpi-hl-cpp-100_1.10.7+repack-4 libhdf5-openmpi-hl-fortran-100_1.10.7+repack-4 libhogweed6_3.7.3-1build1 libhwloc-dev_2.4.1+dfsg-1 libhwloc-plugins_2.4.1+dfsg-1 libhwloc15_2.4.1+dfsg-1 libibverbs-dev_33.2-1ubuntu2 libibverbs1_33.2-1ubuntu2 libicu67_67.1-7ubuntu1 libidn2-0_2.3.2-2 libip4tc2_1.8.7-1ubuntu3 libisl23_0.24-2 libitm1_11.2.0-7ubuntu2 libjpeg-dev_8c-2ubuntu8 libjpeg-turbo8_2.0.6-0ubuntu3 libjpeg-turbo8-dev_2.0.6-0ubuntu3 libjpeg8_8c-2ubuntu8 libjpeg8-dev_8c-2ubuntu8 libjs-jquery_3.5.1+dfsg+~3.5.5-7 libjs-jquery-ui_1.12.1+dfsg-8 libjson-c5_0.15-2build3 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2ubuntu2 libkmod2_28-1ubuntu4 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 liblapack-dev_3.9.0-3ubuntu3 liblapack3_3.9.0-3ubuntu3 libldap-2.5-0_2.5.6+dfsg-1~exp1ubuntu1 liblockfile-bin_1.17-1build1 liblockfile1_1.17-1build1 liblsan0_11.2.0-7ubuntu2 libltdl-dev_2.4.6-15build1 libltdl7_2.4.6-15build1 liblz4-1_1.9.3-2build1 liblzma5_5.2.5-2build1 libmagic-mgc_1:5.39-3build1 libmagic1_1:5.39-3build1 libmd0_1.0.4-1 libmount1_2.36.1-8ubuntu2 libmpc3_1.2.1-1 libmpfr6_4.1.0-3build2 libncurses-dev_6.2+20210905-1 libncurses5-dev_6.2+20210905-1 libncurses6_6.2+20210905-1 libncursesw6_6.2+20210905-1 libnettle8_3.7.3-1build1 libnghttp2-14_1.43.0-1build1 libnl-3-200_3.4.0-1build3 libnl-3-dev_3.4.0-1build3 libnl-route-3-200_3.4.0-1build3 libnl-route-3-dev_3.4.0-1build3 libnpth0_1.6-3build1 libnsl-dev_1.3.0-2build1 libnsl2_1.3.0-2build1 libnuma-dev_2.0.14-0ubuntu3 libnuma1_2.0.14-0ubuntu3 libopenmpi-dev_4.1.0-10ubuntu1 libopenmpi3_4.1.0-10ubuntu1 libp11-kit0_0.24.0-5 libpam-modules_1.3.1-5ubuntu11 libpam-modules-bin_1.3.1-5ubuntu11 libpam-runtime_1.3.1-5ubuntu11 libpam0g_1.3.1-5ubuntu11 libpciaccess0_0.16-1build3 libpcre2-8-0_10.37-0ubuntu2 libpcre3_2:8.39-13build4 libperl5.32_5.32.1-3ubuntu3 libpipeline1_1.5.3-1build1 libpmix-dev_4.1.0-3ubuntu2 libpmix2_4.1.0-3ubuntu2 libpng16-16_1.6.37-3build4 libprocps8_2:3.3.17-5ubuntu3 libpsl5_0.21.0-1.2build1 libpsm-infinipath1_3.3+20.604758e7-6.1 libpsm2-2_11.2.185-1 libquadmath0_11.2.0-7ubuntu2 librdmacm1_33.2-1ubuntu2 libreadline-dev_8.1-2build1 libreadline8_8.1-2build1 librtmp1_2.4+20151223.gitfa8646d.1-2build3 libsasl2-2_2.1.27+dfsg-2.1build1 libsasl2-modules-db_2.1.27+dfsg-2.1build1 libseccomp2_2.5.1-1ubuntu2 libselinux1_3.1-3build3 libsemanage-common_3.1-1ubuntu3 libsemanage1_3.1-1ubuntu3 libsepol1_3.1-1ubuntu2 libsigsegv2_2.13-1ubuntu2 libsmartcols1_2.36.1-8ubuntu2 libsqlite3-0_3.36.0-2 libss2_1.46.3-1ubuntu3 libssh-4_0.9.6-1 libssl-dev_1.1.1l-1ubuntu1 libssl1.1_1.1.1l-1ubuntu1 libstdc++-11-dev_11.2.0-7ubuntu2 libstdc++6_11.2.0-7ubuntu2 libsub-override-perl_0.09-2 libsystemd0_248.3-1ubuntu8 libsz2_1.0.6-1 libtasn1-6_4.16.0-2build1 libtinfo6_6.2+20210905-1 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15build1 libtsan0_11.2.0-7ubuntu2 libubsan1_11.2.0-7ubuntu2 libuchardet0_0.0.7-1build1 libucx0_1.10.1~rc1+really.1.10.0-1 libudev1_248.3-1ubuntu8 libunistring2_0.9.10-6 libuuid1_2.36.1-8ubuntu2 libx11-6_2:1.7.2-2 libx11-data_2:1.7.2-2 libxau6_1:1.0.9-1build4 libxcb1_1.14-3ubuntu2 libxdmcp6_1:1.1.3-0ubuntu4 libxext6_2:1.3.4-0ubuntu4 libxml2_2.9.12+dfsg-5 libxnvctrl0_470.57.01-0ubuntu3 libxxhash0_0.8.0-2build1 libzstd1_1.4.8+dfsg-3 linux-libc-dev_5.13.0-19.19 lockfile-progs_0.1.19 login_1:4.8.1-1ubuntu9 logsave_1.46.3-1ubuntu3 lsb-base_11.1.0ubuntu3 lto-disabled-list_16 m4_1.4.18-5ubuntu1 make_4.3-4ubuntu2 man-db_2.9.4-2build1 mawk_1.3.4.20200120-2build1 mount_2.36.1-8ubuntu2 mpi-default-dev_1.14 ncurses-base_6.2+20210905-1 ncurses-bin_6.2+20210905-1 ocl-icd-libopencl1_2.2.14-2 openmpi-bin_4.1.0-10ubuntu1 openmpi-common_4.1.0-10ubuntu1 openssh-client_1:8.4p1-6ubuntu2 openssl_1.1.1l-1ubuntu1 optipng_0.7.7-2 passwd_1:4.8.1-1ubuntu9 patch_2.7.6-7build1 perl_5.32.1-3ubuntu3 perl-base_5.32.1-3ubuntu3 perl-modules-5.32_5.32.1-3ubuntu3 pinentry-curses_1.1.1-1build1 pkg-config_0.29.2-1ubuntu2 pkgbinarymangler_148 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3 procps_2:3.3.17-5ubuntu3 quilt_0.66-2.1 readline-common_8.1-2build1 rpcsvc-proto_1.4.2-0ubuntu5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-mpb-dummy_0.invalid.0 sed_4.7-1ubuntu2 sensible-utils_0.0.17 systemd_248.3-1ubuntu8 systemd-sysv_248.3-1ubuntu8 systemd-timesyncd_248.3-1ubuntu8 sysvinit-utils_2.96-7ubuntu2 tar_1.34+dfsg-1build2 tzdata_2021a-2ubuntu1 ubuntu-keyring_2021.03.26 usrmerge_25ubuntu1 util-linux_2.36.1-8ubuntu2 xz-utils_5.2.5-2build1 zlib1g_1:1.2.11.dfsg-2ubuntu7 zlib1g-dev_1:1.2.11.dfsg-2ubuntu7 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Wed Sep 15 21:29:29 2021 UTC gpgv: using RSA key 6201FBFFDBBDE07822EABB9696FCAC0D387B5847 gpgv: issuer "debian@alteholz.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./mpb_1.11.1-4.dsc dpkg-source: info: extracting mpb in /<> dpkg-source: info: unpacking mpb_1.11.1.orig.tar.gz dpkg-source: info: unpacking mpb_1.11.1-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 14-mpb-mpb.1.patch dpkg-source: info: applying 15-mpb-mpb-split.1.patch dpkg-source: info: applying 16-utils-mpb-data.1.patch dpkg-source: info: applying zzz-blas-problem-on-mipsel.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-22300116 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-22300116 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-22300116 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package mpb dpkg-buildpackage: info: source version 1.11.1-4 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with autoreconf debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean rm -f config.log config.sub config.guess config.cache ../config.cache rm -f mpb/mpb rm -f mpb/mpb-split rm -f mpb/mpbi-split rm -f utils/mpb-data rm -f src/mpb.h rm -f src/mpbi.h rm -f src/mpb_mpi.h rm -f src/mpbi_mpi.h rm -f src/libmpb.la rm -rf debian/build-tmp make[1]: Leaving directory '/<>' debian/rules binary dh binary --with autoreconf dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:4: warning: The macro `AC_CONFIG_HEADER' is obsolete. configure.ac:4: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:23: warning: The macro `AM_ENABLE_SHARED' is obsolete. configure.ac:23: You should run autoupdate. m4/ltoptions.m4:205: AM_ENABLE_SHARED is expanded from... configure.ac:23: the top level configure.ac:24: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:24: You should run autoupdate. m4/libtool.m4:99: AC_PROG_LIBTOOL is expanded from... configure.ac:24: the top level configure.ac:39: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:39: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:39: the top level configure.ac:45: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:45: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:45: the top level configure.ac:51: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:51: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:51: the top level configure.ac:57: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:57: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:57: the top level configure.ac:62: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:62: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:62: the top level configure.ac:68: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:68: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:68: the top level configure.ac:73: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:73: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:73: the top level configure.ac:86: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:86: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:86: the top level configure.ac:103: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:103: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:103: the top level configure.ac:124: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:124: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:124: the top level configure.ac:125: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:125: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:125: the top level configure.ac:170: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:170: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:170: the top level configure.ac:201: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.ac:201: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... m4/ax_mpi.m4:69: AX_MPI is expanded from... configure.ac:201: the top level configure.ac:258: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:258: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:258: the top level configure.ac:277: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:277: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:277: the top level configure.ac:324: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:324: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:324: the top level configure.ac:337: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:337: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:337: the top level configure.ac:350: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:350: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:350: the top level configure.ac:512: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:512: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:512: the top level configure.ac:562: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.ac:562: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... configure.ac:562: the top level configure.ac:24: installing './compile' configure.ac:24: installing './config.guess' configure.ac:24: installing './config.sub' configure.ac:20: installing './install-sh' configure.ac:20: installing './missing' mpb/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' # we build 4 binaries and need to reconfigure for each # so nothing done here make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build make[1]: Entering directory '/<>' echo amd64 amd64 # there is a problem with zdotc on mipsel # so deactivate the last patch except # on mipsel quilt pop Removing patch debian/patches/zzz-blas-problem-on-mipsel.patch Restoring configure.ac Now at patch debian/patches/16-utils-mpb-data.1.patch # normal version echo "Step1: normal version start" Step1: normal version start #XXX dh_auto_configure -- --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode F77=gfortran CC=mpicc SH_JOB=/bin/bash ./configure --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode configure: creating cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether mpicc accepts -g... yes checking for mpicc option to enable C11 features... none needed checking whether mpicc understands -c and -o together... yes checking dependency style of mpicc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether the compiler supports GNU Fortran 77... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... mpicc checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for sqrt in -lm... yes checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for sgemm_ in -lmkl... no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for deflate in -lz... yes checking for H5Pcreate in -lhdf5... yes checking for hdf5.h... yes checking for guile... yes checking for guile-config... guile-config checking if linking to guile works... yes checking for libguile.h... yes checking for guile/gh.h... no checking for scm_make_smob_type... yes checking for scm_array_get_handle... yes checking for scm_is_array... yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... gen-ctl-io checking for ctl_get_vector3 in -lctl... yes checking for ctl.h... yes checking whether libctl version is at least 4.0.0... checking how to run the C preprocessor... mpicc -E ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... yes checking for ctlgeom.h... yes checking for nlopt.h... no checking for nlopt_minimize in -lnlopt... no checking for egrep... (cached) /usr/bin/grep -E checking for unistd.h... (cached) yes checking for getopt.h... yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... yes checking for inline... inline checking for getopt... yes checking for strncmp... yes checking for bash... /bin/bash checking for feenableexcept... yes checking whether feenableexcept declaration is usable... yes configure: updating cache ../config.cache checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: executing depfiles commands config.status: executing libtool commands cat config.log This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by mpb configure 1.11.1, which was generated by GNU Autoconf 2.71. Invocation command line was $ ./configure --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr '--mandir=${prefix}/share/man' --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode ## --------- ## ## Platform. ## ## --------- ## hostname = lgw01-amd64-003 uname -m = x86_64 uname -r = 4.15.0-159-generic uname -s = Linux uname -v = #167-Ubuntu SMP Tue Sep 21 08:55:05 UTC 2021 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/local/sbin/ PATH: /usr/local/bin/ PATH: /usr/sbin/ PATH: /usr/bin/ PATH: /sbin/ PATH: /bin/ PATH: /usr/games/ ## ----------- ## ## Core tests. ## ## ----------- ## configure:2220: creating cache ../config.cache configure:2556: looking for aux files: compile config.guess config.sub ltmain.sh missing install-sh configure:2569: trying ./ configure:2598: ./compile found configure:2598: ./config.guess found configure:2598: ./config.sub found configure:2598: ./ltmain.sh found configure:2598: ./missing found configure:2580: ./install-sh found configure:2714: checking whether to enable maintainer-specific portions of Makefiles configure:2724: result: yes configure:2774: checking for a BSD-compatible install configure:2847: result: /usr/bin/install -c configure:2858: checking whether build environment is sane configure:2913: result: yes configure:3072: checking for a race-free mkdir -p configure:3116: result: /usr/bin/mkdir -p configure:3123: checking for gawk configure:3158: result: no configure:3123: checking for mawk configure:3144: found /usr/bin/mawk configure:3155: result: mawk configure:3166: checking whether make sets $(MAKE) configure:3189: result: yes configure:3219: checking whether make supports nested variables configure:3237: result: yes configure:3385: checking whether make supports nested variables configure:3403: result: yes configure:3478: checking build system type configure:3493: result: x86_64-pc-linux-gnu configure:3513: checking host system type configure:3527: result: x86_64-pc-linux-gnu configure:3568: checking how to print strings configure:3595: result: printf configure:3629: checking whether make supports the include directive configure:3644: make -f confmf.GNU && cat confinc.out make[2]: Entering directory '/<>' make[2]: Leaving directory '/<>' this is the am__doit target configure:3647: $? = 0 configure:3666: result: yes (GNU style) configure:3742: checking for gcc configure:3774: result: mpicc configure:4127: checking for C compiler version configure:4136: mpicc --version >&5 gcc (Ubuntu 11.2.0-7ubuntu2) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:4147: $? = 0 configure:4136: mpicc -v >&5 Using built-in specs. COLLECT_GCC=/usr/bin/gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu 11.2.0-7ubuntu2' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ZPT0kp/gcc-11-11.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ZPT0kp/gcc-11-11.2.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Ubuntu 11.2.0-7ubuntu2) ... rest of stderr output deleted ... configure:4147: $? = 0 configure:4136: mpicc -V >&5 gcc: error: unrecognized command-line option '-V' gcc: fatal error: no input files compilation terminated. configure:4147: $? = 1 configure:4136: mpicc -qversion >&5 gcc: error: unrecognized command-line option '-qversion'; did you mean '--version'? gcc: fatal error: no input files compilation terminated. configure:4147: $? = 1 configure:4136: mpicc -version >&5 gcc: error: unrecognized command-line option '-version' gcc: fatal error: no input files compilation terminated. configure:4147: $? = 1 configure:4167: checking whether the C compiler works configure:4189: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c >&5 configure:4193: $? = 0 configure:4243: result: yes configure:4246: checking for C compiler default output file name configure:4248: result: a.out configure:4254: checking for suffix of executables configure:4261: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c >&5 configure:4265: $? = 0 configure:4288: result: configure:4310: checking whether we are cross compiling configure:4318: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c >&5 configure:4322: $? = 0 configure:4329: ./conftest configure:4333: $? = 0 configure:4348: result: no configure:4353: checking for suffix of object files configure:4376: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:4380: $? = 0 configure:4402: result: o configure:4406: checking whether the compiler supports GNU C configure:4426: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:4426: $? = 0 configure:4436: result: yes configure:4447: checking whether mpicc accepts -g configure:4468: mpicc -c -g -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:4468: $? = 0 configure:4512: result: yes configure:4532: checking for mpicc option to enable C11 features configure:4547: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:4547: $? = 0 configure:4565: result: none needed configure:4681: checking whether mpicc understands -c and -o together configure:4704: mpicc -c conftest.c -o conftest2.o configure:4707: $? = 0 configure:4704: mpicc -c conftest.c -o conftest2.o configure:4707: $? = 0 configure:4719: result: yes configure:4738: checking dependency style of mpicc configure:4850: result: gcc3 configure:4865: checking for a sed that does not truncate output configure:4935: result: /usr/bin/sed configure:4953: checking for grep that handles long lines and -e configure:5017: result: /usr/bin/grep configure:5022: checking for egrep configure:5090: result: /usr/bin/grep -E configure:5095: checking for fgrep configure:5163: result: /usr/bin/grep -F configure:5199: checking for ld used by mpicc configure:5267: result: /usr/bin/ld configure:5274: checking if the linker (/usr/bin/ld) is GNU ld configure:5290: result: yes configure:5302: checking for BSD- or MS-compatible name lister (nm) configure:5357: result: /usr/bin/nm -B configure:5497: checking the name lister (/usr/bin/nm -B) interface configure:5505: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:5508: /usr/bin/nm -B "conftest.o" configure:5511: output 00000000 B some_variable configure:5518: result: BSD nm configure:5521: checking whether ln -s works configure:5525: result: yes configure:5533: checking the maximum length of command line arguments configure:5665: result: 1572864 configure:5713: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:5754: result: func_convert_file_noop configure:5761: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:5782: result: func_convert_file_noop configure:5789: checking for /usr/bin/ld option to reload object files configure:5797: result: -r configure:5876: checking for objdump configure:5897: found /usr/bin/objdump configure:5908: result: objdump configure:5940: checking how to recognize dependent libraries configure:6141: result: pass_all configure:6231: checking for dlltool configure:6266: result: no configure:6296: checking how to associate runtime and link libraries configure:6324: result: printf %s\n configure:6390: checking for ar configure:6411: found /usr/bin/ar configure:6422: result: ar configure:6459: checking for archiver @FILE support configure:6477: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:6477: $? = 0 configure:6481: ar cr libconftest.a @conftest.lst >&5 configure:6484: $? = 0 configure:6489: ar cr libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:6492: $? = 1 configure:6504: result: @ configure:6567: checking for strip configure:6588: found /usr/bin/strip configure:6599: result: strip configure:6676: checking for ranlib configure:6697: found /usr/bin/ranlib configure:6708: result: ranlib configure:6810: checking command to parse /usr/bin/nm -B output from mpicc object configure:6964: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:6967: $? = 0 configure:6971: /usr/bin/nm -B conftest.o | sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' > conftest.nm configure:7037: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c conftstm.o >&5 configure:7040: $? = 0 configure:7078: result: ok configure:7125: checking for sysroot configure:7156: result: no configure:7163: checking for a working dd configure:7207: result: /usr/bin/dd configure:7211: checking how to truncate binary pipes configure:7227: result: /usr/bin/dd bs=4096 count=1 configure:7364: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:7367: $? = 0 configure:7564: checking for mt configure:7599: result: no configure:7619: checking if : is a manifest tool configure:7626: : '-?' configure:7634: result: no configure:8364: checking for stdio.h configure:8364: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8364: $? = 0 configure:8364: result: yes configure:8364: checking for stdlib.h configure:8364: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8364: $? = 0 configure:8364: result: yes configure:8364: checking for string.h configure:8364: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8364: $? = 0 configure:8364: result: yes configure:8364: checking for inttypes.h configure:8364: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8364: $? = 0 configure:8364: result: yes configure:8364: checking for stdint.h configure:8364: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8364: $? = 0 configure:8364: result: yes configure:8364: checking for strings.h configure:8364: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8364: $? = 0 configure:8364: result: yes configure:8364: checking for sys/stat.h configure:8364: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8364: $? = 0 configure:8364: result: yes configure:8364: checking for sys/types.h configure:8364: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8364: $? = 0 configure:8364: result: yes configure:8364: checking for unistd.h configure:8364: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8364: $? = 0 configure:8364: result: yes configure:8389: checking for dlfcn.h configure:8389: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8389: $? = 0 configure:8389: result: yes configure:8617: checking for objdir configure:8633: result: .libs configure:8897: checking if mpicc supports -fno-rtti -fno-exceptions configure:8916: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command-line option '-fno-rtti' is valid for C++/D/ObjC++ but not for C configure:8920: $? = 0 configure:8933: result: no configure:9297: checking for mpicc option to produce PIC configure:9305: result: -fPIC -DPIC configure:9313: checking if mpicc PIC flag -fPIC -DPIC works configure:9332: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -fPIC -DPIC -DPIC conftest.c >&5 configure:9336: $? = 0 configure:9349: result: yes configure:9378: checking if mpicc static flag -static works configure:9407: result: no configure:9422: checking if mpicc supports -c -o file.o configure:9444: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -o out/conftest2.o conftest.c >&5 configure:9448: $? = 0 configure:9470: result: yes configure:9478: checking if mpicc supports -c -o file.o configure:9526: result: yes configure:9559: checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:10829: result: yes configure:11070: checking dynamic linker characteristics configure:11652: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -Wl,-rpath -Wl,/foo conftest.c >&5 configure:11652: $? = 0 configure:11903: result: GNU/Linux ld.so configure:12025: checking how to hardcode library paths into programs configure:12050: result: immediate configure:12602: checking whether stripping libraries is possible configure:12607: result: yes configure:12642: checking if libtool supports shared libraries configure:12644: result: yes configure:12647: checking whether to build shared libraries configure:12672: result: no configure:12675: checking whether to build static libraries configure:12679: result: yes configure:12836: checking for Fortran 77 compiler version configure:12845: gfortran --version >&5 GNU Fortran (Ubuntu 11.2.0-7ubuntu2) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:12856: $? = 0 configure:12845: gfortran -v >&5 Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu 11.2.0-7ubuntu2' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ZPT0kp/gcc-11-11.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ZPT0kp/gcc-11-11.2.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Ubuntu 11.2.0-7ubuntu2) ... rest of stderr output deleted ... configure:12856: $? = 0 configure:12845: gfortran -V >&5 gfortran: error: unrecognized command-line option '-V' gfortran: fatal error: no input files compilation terminated. configure:12856: $? = 1 configure:12845: gfortran -qversion >&5 gfortran: error: unrecognized command-line option '-qversion'; did you mean '--version'? gfortran: fatal error: no input files compilation terminated. configure:12856: $? = 1 configure:12865: checking whether the compiler supports GNU Fortran 77 configure:12879: gfortran -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong conftest.F >&5 configure:12879: $? = 0 configure:12889: result: yes configure:12897: checking whether gfortran accepts -g configure:12909: gfortran -c -g conftest.f >&5 configure:12909: $? = 0 configure:12918: result: yes configure:13047: checking if libtool supports shared libraries configure:13049: result: yes configure:13052: checking whether to build shared libraries configure:13076: result: no configure:13079: checking whether to build static libraries configure:13083: result: yes configure:13441: checking for gfortran option to produce PIC configure:13449: result: -fPIC configure:13457: checking if gfortran PIC flag -fPIC works configure:13476: gfortran -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fPIC conftest.f >&5 configure:13480: $? = 0 configure:13493: result: yes configure:13516: checking if gfortran static flag -static works configure:13545: result: yes configure:13557: checking if gfortran supports -c -o file.o configure:13579: gfortran -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -o out/conftest2.o conftest.f >&5 configure:13583: $? = 0 configure:13605: result: yes configure:13610: checking if gfortran supports -c -o file.o configure:13658: result: yes configure:13688: checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:14907: result: yes configure:15049: checking dynamic linker characteristics configure:15803: result: GNU/Linux ld.so configure:15868: checking how to hardcode library paths into programs configure:15893: result: immediate configure:15928: checking for perl configure:15951: found /usr/bin/perl configure:15964: result: /usr/bin/perl configure:15974: checking for vendor cc to be used instead of gcc configure:15976: result: configure:15982: checking for cc configure:16014: result: mpicc configure:16463: checking for C compiler version configure:16472: mpicc --version >&5 gcc (Ubuntu 11.2.0-7ubuntu2) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:16483: $? = 0 configure:16472: mpicc -v >&5 Using built-in specs. COLLECT_GCC=/usr/bin/gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu 11.2.0-7ubuntu2' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ZPT0kp/gcc-11-11.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ZPT0kp/gcc-11-11.2.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Ubuntu 11.2.0-7ubuntu2) ... rest of stderr output deleted ... configure:16483: $? = 0 configure:16472: mpicc -V >&5 gcc: error: unrecognized command-line option '-V' gcc: fatal error: no input files compilation terminated. configure:16483: $? = 1 configure:16472: mpicc -qversion >&5 gcc: error: unrecognized command-line option '-qversion'; did you mean '--version'? gcc: fatal error: no input files compilation terminated. configure:16483: $? = 1 configure:16472: mpicc -version >&5 gcc: error: unrecognized command-line option '-version' gcc: fatal error: no input files compilation terminated. configure:16483: $? = 1 configure:16487: checking whether the compiler supports GNU C configure:16517: result: yes configure:16528: checking whether mpicc accepts -g configure:16593: result: yes configure:16613: checking for mpicc option to enable C11 features configure:16646: result: none needed configure:16762: checking whether mpicc understands -c and -o together configure:16800: result: yes configure:16819: checking dependency style of mpicc configure:16931: result: gcc3 configure:17140: checking for sqrt in -lm configure:17163: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lm >&5 conftest.c:31:6: warning: conflicting types for built-in function 'sqrt'; expected 'double(double)' [-Wbuiltin-declaration-mismatch] 31 | char sqrt (); | ^~~~ conftest.c:1:1: note: 'sqrt' is declared in header '' 1 | /* confdefs.h */ configure:17163: $? = 0 configure:17173: result: yes configure:17191: checking how to get verbose linking output from gfortran configure:17202: gfortran -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong conftest.f >&5 configure:17202: $? = 0 configure:17221: gfortran -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -v -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.f -lm Using built-in specs. Target: x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Ubuntu 11.2.0-7ubuntu2) /usr/lib/gcc/x86_64-linux-gnu/11/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -dumpbase-ext .f -mtune=generic -march=x86-64 -g -O2 -version -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -flto=auto -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/11/finclude -fpre-include=/usr/include/finclude/math-vector-fortran.h -o /tmp/ccvR6UHW.s GNU Fortran (Ubuntu 11.2.0-7ubuntu2) version 11.2.0 (x86_64-linux-gnu) compiled by GNU C version 11.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.24-GMP warning: MPC header version 1.2.0 differs from library version 1.2.1. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (Ubuntu 11.2.0-7ubuntu2) version 11.2.0 (x86_64-linux-gnu) compiled by GNU C version 11.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.24-GMP warning: MPC header version 1.2.0 differs from library version 1.2.1. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --gdwarf-5 --64 -o /tmp/ccuUZpeD.o /tmp/ccvR6UHW.s GNU assembler version 2.37 (x86_64-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.37 Reading specs from /usr/lib/gcc/x86_64-linux-gnu/11/libgfortran.spec rename spec lib to liborig /usr/lib/gcc/x86_64-linux-gnu/11/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/11/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper -plugin-opt=-fresolution=/tmp/cca95TF5.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -flto=auto -flto=auto --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -z now -z relro -o conftest /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/11/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -Bsymbolic-functions -z relro -z now -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi /tmp/ccuUZpeD.o -lgfortran -lm -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/11/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crtn.o /usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper -fresolution=/tmp/cca95TF5.res -flinker-output=pie /tmp/ccuUZpeD.o /usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper -fresolution=/tmp/cca95TF5.res -flinker-output=pie /tmp/ccuUZpeD.o LTO parallelism level set to 4 gfortran @/tmp/ccKg1djo Using built-in specs. Target: x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Ubuntu 11.2.0-7ubuntu2) /usr/lib/gcc/x86_64-linux-gnu/11/lto1 -quiet -dumpbase ./conftest.wpa -mtune=generic -march=x86-64 -g -g -O2 -O2 -version -fno-openmp -fno-openacc -fPIC -fcf-protection=none -ffile-prefix-map=/<>=. -ffat-lto-objects -fstack-protector-strong -fltrans-output-list=/tmp/cc8dvJk7.ltrans.out -fwpa=4 -fresolution=/tmp/cca95TF5.res -flinker-output=pie @/tmp/cckF9fAm GNU GIMPLE (Ubuntu 11.2.0-7ubuntu2) version 11.2.0 (x86_64-linux-gnu) compiled by GNU C version 11.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.24-GMP warning: MPC header version 1.2.0 differs from library version 1.2.1. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU GIMPLE (Ubuntu 11.2.0-7ubuntu2) version 11.2.0 (x86_64-linux-gnu) compiled by GNU C version 11.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.24-GMP warning: MPC header version 1.2.0 differs from library version 1.2.1. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 make -f /tmp/cc1SaEfh.mk -j4 all Using built-in specs. Target: x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Ubuntu 11.2.0-7ubuntu2) /usr/lib/gcc/x86_64-linux-gnu/11/lto1 -quiet -dumpbase ./conftest.ltrans0.ltrans -mtune=generic -march=x86-64 -g -g -O2 -O2 -version -fno-openmp -fno-openacc -fPIC -fcf-protection=none -ffile-prefix-map=/<>=. -ffat-lto-objects -fstack-protector-strong -fltrans /tmp/cc8dvJk7.ltrans0.o -o /tmp/ccz9nzOk.s GNU GIMPLE (Ubuntu 11.2.0-7ubuntu2) version 11.2.0 (x86_64-linux-gnu) compiled by GNU C version 11.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.24-GMP warning: MPC header version 1.2.0 differs from library version 1.2.1. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU GIMPLE (Ubuntu 11.2.0-7ubuntu2) version 11.2.0 (x86_64-linux-gnu) compiled by GNU C version 11.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.24-GMP warning: MPC header version 1.2.0 differs from library version 1.2.1. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --gdwarf-5 --64 -o /tmp/cc8dvJk7.ltrans0.ltrans.o /tmp/ccz9nzOk.s GNU assembler version 2.37 (x86_64-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.37 configure:17304: result: -v configure:17306: checking for Fortran 77 libraries of gfortran configure:17330: gfortran -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -v -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.f -lm Using built-in specs. Target: x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Ubuntu 11.2.0-7ubuntu2) /usr/lib/gcc/x86_64-linux-gnu/11/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -dumpbase-ext .f -mtune=generic -march=x86-64 -g -O2 -version -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -flto=auto -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/11/finclude -fpre-include=/usr/include/finclude/math-vector-fortran.h -o /tmp/cccbt20Z.s GNU Fortran (Ubuntu 11.2.0-7ubuntu2) version 11.2.0 (x86_64-linux-gnu) compiled by GNU C version 11.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.24-GMP warning: MPC header version 1.2.0 differs from library version 1.2.1. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (Ubuntu 11.2.0-7ubuntu2) version 11.2.0 (x86_64-linux-gnu) compiled by GNU C version 11.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.24-GMP warning: MPC header version 1.2.0 differs from library version 1.2.1. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --gdwarf-5 --64 -o /tmp/ccMrB3fi.o /tmp/cccbt20Z.s GNU assembler version 2.37 (x86_64-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.37 Reading specs from /usr/lib/gcc/x86_64-linux-gnu/11/libgfortran.spec rename spec lib to liborig /usr/lib/gcc/x86_64-linux-gnu/11/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/11/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper -plugin-opt=-fresolution=/tmp/ccXR8brY.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -flto=auto -flto=auto --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -z now -z relro -o conftest /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/11/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -Bsymbolic-functions -z relro -z now -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi /tmp/ccMrB3fi.o -lgfortran -lm -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/11/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crtn.o /usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper -fresolution=/tmp/ccXR8brY.res -flinker-output=pie /tmp/ccMrB3fi.o /usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper -fresolution=/tmp/ccXR8brY.res -flinker-output=pie /tmp/ccMrB3fi.o LTO parallelism level set to 4 gfortran @/tmp/cck7oH65 Using built-in specs. Target: x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Ubuntu 11.2.0-7ubuntu2) /usr/lib/gcc/x86_64-linux-gnu/11/lto1 -quiet -dumpbase ./conftest.wpa -mtune=generic -march=x86-64 -g -g -O2 -O2 -version -fno-openmp -fno-openacc -fPIC -fcf-protection=none -ffile-prefix-map=/<>=. -ffat-lto-objects -fstack-protector-strong -fltrans-output-list=/tmp/ccpj55vE.ltrans.out -fwpa=4 -fresolution=/tmp/ccXR8brY.res -flinker-output=pie @/tmp/ccFA4vqC GNU GIMPLE (Ubuntu 11.2.0-7ubuntu2) version 11.2.0 (x86_64-linux-gnu) compiled by GNU C version 11.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.24-GMP warning: MPC header version 1.2.0 differs from library version 1.2.1. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU GIMPLE (Ubuntu 11.2.0-7ubuntu2) version 11.2.0 (x86_64-linux-gnu) compiled by GNU C version 11.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.24-GMP warning: MPC header version 1.2.0 differs from library version 1.2.1. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 make -f /tmp/cc4pR5nA.mk -j4 all Using built-in specs. Target: x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Ubuntu 11.2.0-7ubuntu2) /usr/lib/gcc/x86_64-linux-gnu/11/lto1 -quiet -dumpbase ./conftest.ltrans0.ltrans -mtune=generic -march=x86-64 -g -g -O2 -O2 -version -fno-openmp -fno-openacc -fPIC -fcf-protection=none -ffile-prefix-map=/<>=. -ffat-lto-objects -fstack-protector-strong -fltrans /tmp/ccpj55vE.ltrans0.o -o /tmp/ccBvBnIz.s GNU GIMPLE (Ubuntu 11.2.0-7ubuntu2) version 11.2.0 (x86_64-linux-gnu) compiled by GNU C version 11.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.24-GMP warning: MPC header version 1.2.0 differs from library version 1.2.1. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU GIMPLE (Ubuntu 11.2.0-7ubuntu2) version 11.2.0 (x86_64-linux-gnu) compiled by GNU C version 11.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.24-GMP warning: MPC header version 1.2.0 differs from library version 1.2.1. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --gdwarf-5 --64 -o /tmp/ccpj55vE.ltrans0.ltrans.o /tmp/ccBvBnIz.s GNU assembler version 2.37 (x86_64-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.37 configure:17546: result: -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath configure:17562: checking for dummy main to link with Fortran 77 libraries configure:17597: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:17597: $? = 0 configure:17644: result: none configure:17676: checking for Fortran 77 name-mangling scheme configure:17690: gfortran -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong conftest.f >&5 configure:17690: $? = 0 configure:17729: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c cfortran_test.o -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: /tmp/ccufIsxo.ltrans0.ltrans.o: in function `main': ./conftest.c:44: undefined reference to `foobar' collect2: error: ld returned 1 exit status configure:17729: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char foobar (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return foobar (); | ; | return 0; | } configure:17729: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c cfortran_test.o -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:17729: $? = 0 configure:17785: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c cfortran_test.o -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:17785: $? = 0 configure:17828: result: lower case, underscore, no extra underscore configure:18246: checking for fftw_execute in -lfftw3 configure:18277: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lfftw3 -lm >&5 configure:18277: $? = 0 configure:18288: result: yes configure:18888: checking if sgemm_ is being linked in already configure:18913: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: /tmp/ccCn5jdd.ltrans0.ltrans.o: in function `main': ./conftest.c:47: undefined reference to `sgemm_' collect2: error: ld returned 1 exit status configure:18913: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:18919: result: no configure:18927: checking for sgemm_ in -lopenblas configure:18958: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lopenblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lopenblas collect2: error: ld returned 1 exit status configure:18958: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:18969: result: no configure:18981: checking for ATL_xerbla in -latlas configure:19012: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -latlas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -latlas collect2: error: ld returned 1 exit status configure:19012: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char ATL_xerbla (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return ATL_xerbla (); | ; | return 0; | } configure:19022: result: no configure:19131: checking for sgemm_ in -lblas configure:19162: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:19162: $? = 0 configure:19173: result: yes configure:19178: checking for dgemm_ in -ldgemm configure:19209: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -ldgemm -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -ldgemm collect2: error: ld returned 1 exit status configure:19209: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char dgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return dgemm_ (); | ; | return 0; | } configure:19220: result: no configure:19283: checking for sgemm_ in -lmkl configure:19314: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lmkl -lguide -lpthread -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lmkl /usr/bin/ld: cannot find -lguide collect2: error: ld returned 1 exit status configure:19314: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19325: result: no configure:19337: checking for sgemm_ in -framework vecLib configure:19362: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -framework vecLib -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 gcc: error: unrecognized command-line option '-framework' configure:19362: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19368: result: no configure:19376: checking for sgemm_ in -lcxml configure:19407: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lcxml -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lcxml collect2: error: ld returned 1 exit status configure:19407: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19418: result: no configure:19430: checking for sgemm_ in -ldxml configure:19461: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -ldxml -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -ldxml collect2: error: ld returned 1 exit status configure:19461: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19472: result: no configure:19588: checking for sgemm_ in -lscs configure:19619: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lscs -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lscs collect2: error: ld returned 1 exit status configure:19619: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19630: result: no configure:19642: checking for sgemm_ in -lcomplib.sgimath configure:19673: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lcomplib.sgimath -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lcomplib.sgimath collect2: error: ld returned 1 exit status configure:19673: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19684: result: no configure:19696: checking for sgemm_ in -lblas configure:19738: result: yes configure:19743: checking for sgemm_ in -lessl configure:19774: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lessl -lblas -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lessl collect2: error: ld returned 1 exit status configure:19774: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19785: result: no configure:19799: checking for sgemm_ in -lblas configure:19841: result: yes configure:19958: checking for cheev_ configure:19958: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lfftw3 -lm -lblas -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: /tmp/cc5Q0DTz.ltrans0.ltrans.o: in function `main': ./conftest.c:59: undefined reference to `cheev_' collect2: error: ld returned 1 exit status configure:19958: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | /* end confdefs.h. */ | /* Define cheev_ to an innocuous variant, in case declares cheev_. | For example, HP-UX 11i declares gettimeofday. */ | #define cheev_ innocuous_cheev_ | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char cheev_ (); below. */ | | #include | #undef cheev_ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cheev_ (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_cheev_ || defined __stub___cheev_ | choke me | #endif | | int | main (void) | { | return cheev_ (); | ; | return 0; | } configure:19958: result: no configure:19972: checking for cheev_ in -llapack configure:20003: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -llapack -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath -lblas -lfftw3 -lm >&5 configure:20003: $? = 0 configure:20014: result: yes configure:20940: checking for deflate in -lz configure:20971: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:20971: $? = 0 configure:20981: result: yes configure:20996: checking for H5Pcreate in -lhdf5 configure:21027: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:21027: $? = 0 configure:21037: result: yes configure:21044: checking for hdf5.h configure:21044: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:21044: $? = 0 configure:21044: result: yes configure:21114: checking for guile configure:21135: found /usr/bin/guile configure:21147: result: yes configure:21161: checking for guile-config configure:21182: found /usr/bin/guile-config configure:21194: result: guile-config configure:21519: checking if linking to guile works configure:21544: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: /tmp/ccQMv87X.ltrans0.ltrans.o: in function `main': ./conftest.c:52: undefined reference to `gh_enter' collect2: error: ld returned 1 exit status configure:21544: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | #define HAVE_LAPACK 1 | #define HAVE_LIBZ 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char gh_enter (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return gh_enter (); | ; | return 0; | } configure:21572: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:21572: $? = 0 configure:21574: result: yes configure:21587: checking for libguile.h configure:21587: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c >&5 In file included from /usr/include/guile/3.0/libguile.h:33, from conftest.c:64: /usr/include/guile/3.0/libguile/gc.h: In function 'scm_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:161:14: note: in expansion of macro 'SCM_PACK_POINTER' 161 | SCM cell = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_double_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:179:7: note: in expansion of macro 'SCM_PACK_POINTER' 179 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (2 * sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_words': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:218:7: note: in expansion of macro 'SCM_PACK_POINTER' 218 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_bits) * n_words)); | ^~~~~~~~~~~~~~~~ configure:21587: $? = 0 configure:21587: result: yes configure:21593: checking for guile/gh.h configure:21593: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c >&5 conftest.c:65:10: fatal error: guile/gh.h: No such file or directory 65 | #include | ^~~~~~~~~~~~ compilation terminated. configure:21593: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | #define HAVE_LAPACK 1 | #define HAVE_LIBZ 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_LIBGUILE_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:21593: result: no configure:21603: checking for scm_make_smob_type configure:21603: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:21603: $? = 0 configure:21603: result: yes configure:21609: checking for scm_array_get_handle configure:21609: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:21609: $? = 0 configure:21609: result: yes configure:21615: checking for scm_is_array configure:21615: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:21615: $? = 0 configure:21615: result: yes configure:21622: checking for SCM_SMOB_PREDICATE configure:21648: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 In file included from /usr/include/guile/3.0/libguile.h:33, from conftest.c:41: /usr/include/guile/3.0/libguile/gc.h: In function 'scm_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:161:14: note: in expansion of macro 'SCM_PACK_POINTER' 161 | SCM cell = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_double_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:179:7: note: in expansion of macro 'SCM_PACK_POINTER' 179 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (2 * sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_words': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:218:7: note: in expansion of macro 'SCM_PACK_POINTER' 218 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_bits) * n_words)); | ^~~~~~~~~~~~~~~~ In file included from /usr/include/guile/3.0/libguile.h:33, from conftest.c:41: conftest.c: In function 'main': /usr/include/guile/3.0/libguile/scm.h:171:62: warning: assignment to 'SCM' {aka 'struct scm_unused_struct *'} from 'int' makes pointer from integer without a cast [-Wint-conversion] 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/scm.h:426:38: note: in expansion of macro 'SCM_UNPACK' 426 | #define SCM_IMP(x) (6 & SCM_UNPACK (x)) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:427:35: note: in expansion of macro 'SCM_IMP' 427 | #define SCM_NIMP(x) (!SCM_IMP (x)) | ^~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:4: note: in expansion of macro 'SCM_NIMP' 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:67: warning: pointer/integer type mismatch in conditional expression 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/scm.h:426:38: note: in expansion of macro 'SCM_UNPACK' 426 | #define SCM_IMP(x) (6 & SCM_UNPACK (x)) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:427:35: note: in expansion of macro 'SCM_IMP' 427 | #define SCM_NIMP(x) (!SCM_IMP (x)) | ^~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:4: note: in expansion of macro 'SCM_NIMP' 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:62: warning: assignment to 'SCM' {aka 'struct scm_unused_struct *'} from 'int' makes pointer from integer without a cast [-Wint-conversion] 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:56:28: note: in expansion of macro 'SCM_CELL_WORD' 56 | #define SCM_CELL_WORD_0(x) SCM_CELL_WORD ((x), 0) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:83:26: note: in expansion of macro 'SCM_CELL_WORD_0' 83 | #define SCM_CELL_TYPE(x) SCM_CELL_WORD_0 (x) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:512:43: note: in expansion of macro 'SCM_CELL_TYPE' 512 | #define SCM_TYP16(x) (0xffff & SCM_CELL_TYPE (x)) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:20: note: in expansion of macro 'SCM_TYP16' 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^~~~ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:67: warning: pointer/integer type mismatch in conditional expression 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:56:28: note: in expansion of macro 'SCM_CELL_WORD' 56 | #define SCM_CELL_WORD_0(x) SCM_CELL_WORD ((x), 0) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:83:26: note: in expansion of macro 'SCM_CELL_WORD_0' 83 | #define SCM_CELL_TYPE(x) SCM_CELL_WORD_0 (x) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:512:43: note: in expansion of macro 'SCM_CELL_TYPE' 512 | #define SCM_TYP16(x) (0xffff & SCM_CELL_TYPE (x)) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:20: note: in expansion of macro 'SCM_TYP16' 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^~~~ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:62: warning: assignment to 'SCM' {aka 'struct scm_unused_struct *'} from 'int' makes pointer from integer without a cast [-Wint-conversion] 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:56:28: note: in expansion of macro 'SCM_CELL_WORD' 56 | #define SCM_CELL_WORD_0(x) SCM_CELL_WORD ((x), 0) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:83:26: note: in expansion of macro 'SCM_CELL_WORD_0' 83 | #define SCM_CELL_TYPE(x) SCM_CELL_WORD_0 (x) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:512:43: note: in expansion of macro 'SCM_CELL_TYPE' 512 | #define SCM_TYP16(x) (0xffff & SCM_CELL_TYPE (x)) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:20: note: in expansion of macro 'SCM_TYP16' 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^~~~ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:67: warning: pointer/integer type mismatch in conditional expression 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:56:28: note: in expansion of macro 'SCM_CELL_WORD' 56 | #define SCM_CELL_WORD_0(x) SCM_CELL_WORD ((x), 0) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:83:26: note: in expansion of macro 'SCM_CELL_WORD_0' 83 | #define SCM_CELL_TYPE(x) SCM_CELL_WORD_0 (x) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:512:43: note: in expansion of macro 'SCM_CELL_TYPE' 512 | #define SCM_TYP16(x) (0xffff & SCM_CELL_TYPE (x)) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:20: note: in expansion of macro 'SCM_TYP16' 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^~~~ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:17: warning: statement with no effect [-Wunused-value] 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:427:34: warning: 'x' is used uninitialized [-Wuninitialized] 427 | #define SCM_NIMP(x) (!SCM_IMP (x)) | ^ conftest.c:57:5: note: 'x' was declared here 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^ configure:21648: $? = 0 configure:21656: result: yes configure:21663: checking for SCM_SMOB_DATA configure:21689: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 In file included from /usr/include/guile/3.0/libguile.h:33, from conftest.c:42: /usr/include/guile/3.0/libguile/gc.h: In function 'scm_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:161:14: note: in expansion of macro 'SCM_PACK_POINTER' 161 | SCM cell = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_double_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:179:7: note: in expansion of macro 'SCM_PACK_POINTER' 179 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (2 * sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_words': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:218:7: note: in expansion of macro 'SCM_PACK_POINTER' 218 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_bits) * n_words)); | ^~~~~~~~~~~~~~~~ In file included from /usr/include/guile/3.0/libguile.h:33, from conftest.c:42: conftest.c: In function 'main': /usr/include/guile/3.0/libguile/scm.h:171:62: warning: assignment to 'SCM' {aka 'struct scm_unused_struct *'} from 'int' makes pointer from integer without a cast [-Wint-conversion] 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:179:42: note: in expansion of macro 'SCM_CELL_WORD' 179 | #define SCM_SMOB_DATA_N(x, n) (SCM_CELL_WORD ((x), (n))) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:183:42: note: in expansion of macro 'SCM_SMOB_DATA_N' 183 | #define SCM_SMOB_DATA_1(x) (SCM_SMOB_DATA_N ((x), 1)) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:192:42: note: in expansion of macro 'SCM_SMOB_DATA_1' 192 | #define SCM_SMOB_DATA(x) (SCM_SMOB_DATA_1 (x)) | ^~~~~~~~~~~~~~~ conftest.c:58:8: note: in expansion of macro 'SCM_SMOB_DATA' 58 | int x; SCM_SMOB_DATA(x); | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:67: warning: pointer/integer type mismatch in conditional expression 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:179:42: note: in expansion of macro 'SCM_CELL_WORD' 179 | #define SCM_SMOB_DATA_N(x, n) (SCM_CELL_WORD ((x), (n))) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:183:42: note: in expansion of macro 'SCM_SMOB_DATA_N' 183 | #define SCM_SMOB_DATA_1(x) (SCM_SMOB_DATA_N ((x), 1)) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:192:42: note: in expansion of macro 'SCM_SMOB_DATA_1' 192 | #define SCM_SMOB_DATA(x) (SCM_SMOB_DATA_1 (x)) | ^~~~~~~~~~~~~~~ conftest.c:58:8: note: in expansion of macro 'SCM_SMOB_DATA' 58 | int x; SCM_SMOB_DATA(x); | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:62: warning: assignment to 'SCM' {aka 'struct scm_unused_struct *'} from 'int' makes pointer from integer without a cast [-Wint-conversion] 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:179:42: note: in expansion of macro 'SCM_CELL_WORD' 179 | #define SCM_SMOB_DATA_N(x, n) (SCM_CELL_WORD ((x), (n))) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:183:42: note: in expansion of macro 'SCM_SMOB_DATA_N' 183 | #define SCM_SMOB_DATA_1(x) (SCM_SMOB_DATA_N ((x), 1)) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:192:42: note: in expansion of macro 'SCM_SMOB_DATA_1' 192 | #define SCM_SMOB_DATA(x) (SCM_SMOB_DATA_1 (x)) | ^~~~~~~~~~~~~~~ conftest.c:58:8: note: in expansion of macro 'SCM_SMOB_DATA' 58 | int x; SCM_SMOB_DATA(x); | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:67: warning: pointer/integer type mismatch in conditional expression 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:179:42: note: in expansion of macro 'SCM_CELL_WORD' 179 | #define SCM_SMOB_DATA_N(x, n) (SCM_CELL_WORD ((x), (n))) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:183:42: note: in expansion of macro 'SCM_SMOB_DATA_N' 183 | #define SCM_SMOB_DATA_1(x) (SCM_SMOB_DATA_N ((x), 1)) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:192:42: note: in expansion of macro 'SCM_SMOB_DATA_1' 192 | #define SCM_SMOB_DATA(x) (SCM_SMOB_DATA_1 (x)) | ^~~~~~~~~~~~~~~ conftest.c:58:8: note: in expansion of macro 'SCM_SMOB_DATA' 58 | int x; SCM_SMOB_DATA(x); | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:26: warning: statement with no effect [-Wunused-value] 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:179:42: note: in expansion of macro 'SCM_CELL_WORD' 179 | #define SCM_SMOB_DATA_N(x, n) (SCM_CELL_WORD ((x), (n))) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:183:42: note: in expansion of macro 'SCM_SMOB_DATA_N' 183 | #define SCM_SMOB_DATA_1(x) (SCM_SMOB_DATA_N ((x), 1)) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:192:42: note: in expansion of macro 'SCM_SMOB_DATA_1' 192 | #define SCM_SMOB_DATA(x) (SCM_SMOB_DATA_1 (x)) | ^~~~~~~~~~~~~~~ conftest.c:58:8: note: in expansion of macro 'SCM_SMOB_DATA' 58 | int x; SCM_SMOB_DATA(x); | ^~~~~~~~~~~~~ In file included from /usr/include/guile/3.0/libguile/pairs.h:26, from /usr/include/guile/3.0/libguile/alist.h:26, from /usr/include/guile/3.0/libguile.h:34, from conftest.c:42: /usr/include/guile/3.0/libguile/gc.h:46:56: warning: 'x' is used uninitialized [-Wuninitialized] 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^ conftest.c:58:5: note: 'x' was declared here 58 | int x; SCM_SMOB_DATA(x); | ^ configure:21689: $? = 0 configure:21697: result: yes configure:21704: checking for SCM_NEWSMOB configure:21730: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 In file included from /usr/include/guile/3.0/libguile.h:33, from conftest.c:43: /usr/include/guile/3.0/libguile/gc.h: In function 'scm_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:161:14: note: in expansion of macro 'SCM_PACK_POINTER' 161 | SCM cell = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_double_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:179:7: note: in expansion of macro 'SCM_PACK_POINTER' 179 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (2 * sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_words': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:218:7: note: in expansion of macro 'SCM_PACK_POINTER' 218 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_bits) * n_words)); | ^~~~~~~~~~~~~~~~ In file included from /usr/include/guile/3.0/libguile/threads.h:29, from /usr/include/guile/3.0/libguile/async.h:25, from /usr/include/guile/3.0/libguile.h:38, from conftest.c:43: conftest.c: In function 'main': /usr/include/guile/3.0/libguile/smob.h:159:5: warning: assignment to 'int' from 'SCM' {aka 'struct scm_unused_struct *'} makes integer from pointer without a cast [-Wint-conversion] 159 | z = scm_new_smob ((tc), (scm_t_bits)(data)) | ^ conftest.c:59:8: note: in expansion of macro 'SCM_NEWSMOB' 59 | int x; SCM_NEWSMOB(x,1,0); | ^~~~~~~~~~~ conftest.c:59:5: warning: variable 'x' set but not used [-Wunused-but-set-variable] 59 | int x; SCM_NEWSMOB(x,1,0); | ^ configure:21730: $? = 0 configure:21738: result: yes configure:21750: checking how to activate readline in Guile configure:21760: result: ice-9 readline configure:21789: checking for libctl dir configure:21809: result: /usr/share/libctl configure:21817: checking for gen-ctl-io configure:21838: found /usr/bin/gen-ctl-io configure:21849: result: gen-ctl-io configure:21866: checking for ctl_get_vector3 in -lctl configure:21897: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lctl -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:21897: $? = 0 configure:21907: result: yes configure:21922: checking for ctl.h configure:21922: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c >&5 configure:21922: $? = 0 configure:21922: result: yes configure:21970: checking whether libctl version is at least 4.0.0 configure:21977: checking how to run the C preprocessor configure:22003: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c configure:22003: $? = 0 configure:22018: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c conftest.c:44:10: fatal error: ac_nonexistent.h: No such file or directory 44 | #include | ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:22018: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | #define HAVE_LAPACK 1 | #define HAVE_LIBZ 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_LIBGUILE_H 1 | #define HAVE_SCM_MAKE_SMOB_TYPE 1 | #define HAVE_SCM_ARRAY_GET_HANDLE 1 | #define HAVE_SCM_IS_ARRAY 1 | #define HAVE_SCM_SMOB_PREDICATE 1 | #define HAVE_SCM_SMOB_DATA 1 | #define HAVE_SCM_NEWSMOB 1 | #define HAVE_LIBCTL 1 | /* end confdefs.h. */ | #include configure:22045: result: mpicc -E configure:22059: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c configure:22059: $? = 0 configure:22074: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c conftest.c:44:10: fatal error: ac_nonexistent.h: No such file or directory 44 | #include | ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:22074: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | #define HAVE_LAPACK 1 | #define HAVE_LIBZ 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_LIBGUILE_H 1 | #define HAVE_SCM_MAKE_SMOB_TYPE 1 | #define HAVE_SCM_ARRAY_GET_HANDLE 1 | #define HAVE_SCM_IS_ARRAY 1 | #define HAVE_SCM_SMOB_PREDICATE 1 | #define HAVE_SCM_SMOB_DATA 1 | #define HAVE_SCM_NEWSMOB 1 | #define HAVE_LIBCTL 1 | /* end confdefs.h. */ | #include configure:22117: result: ok configure:22126: checking for libctl_quiet feature configure:22129: result: yes configure:22148: checking for vector3_dot in -lctlgeom configure:22179: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:22179: $? = 0 configure:22189: result: yes configure:22202: checking for ctlgeom.h configure:22202: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:22202: $? = 0 configure:22202: result: yes configure:22265: checking for nlopt.h configure:22265: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 conftest.c:73:10: fatal error: nlopt.h: No such file or directory 73 | #include | ^~~~~~~~~ compilation terminated. configure:22265: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | #define HAVE_LAPACK 1 | #define HAVE_LIBZ 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_LIBGUILE_H 1 | #define HAVE_SCM_MAKE_SMOB_TYPE 1 | #define HAVE_SCM_ARRAY_GET_HANDLE 1 | #define HAVE_SCM_IS_ARRAY 1 | #define HAVE_SCM_SMOB_PREDICATE 1 | #define HAVE_SCM_SMOB_DATA 1 | #define HAVE_SCM_NEWSMOB 1 | #define HAVE_LIBCTL 1 | #define HAVE_LIBCTL_QUIET 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:22265: result: no configure:22273: checking for nlopt_minimize in -lnlopt configure:22304: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lnlopt -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lnlopt collect2: error: ld returned 1 exit status configure:22304: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | #define HAVE_LAPACK 1 | #define HAVE_LIBZ 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_LIBGUILE_H 1 | #define HAVE_SCM_MAKE_SMOB_TYPE 1 | #define HAVE_SCM_ARRAY_GET_HANDLE 1 | #define HAVE_SCM_IS_ARRAY 1 | #define HAVE_SCM_SMOB_PREDICATE 1 | #define HAVE_SCM_SMOB_DATA 1 | #define HAVE_SCM_NEWSMOB 1 | #define HAVE_LIBCTL 1 | #define HAVE_LIBCTL_QUIET 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char nlopt_minimize (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return nlopt_minimize (); | ; | return 0; | } configure:22314: result: no configure:22331: checking for egrep configure:22399: result: /usr/bin/grep -E configure:22405: checking for unistd.h configure:22405: result: yes configure:22411: checking for getopt.h configure:22411: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:22411: $? = 0 configure:22411: result: yes configure:22417: checking for nlopt.h configure:22417: result: no configure:22426: checking for an ANSI C-conforming const configure:22501: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 conftest.c: In function 'main': conftest.c:78:9: warning: cast discards 'const' qualifier from pointer target type [-Wcast-qual] 78 | ppc = (char**) pcpcc; | ^ configure:22501: $? = 0 configure:22509: result: yes configure:22517: checking for inline configure:22534: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:22534: $? = 0 configure:22543: result: inline configure:22563: checking for getopt configure:22563: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:22563: $? = 0 configure:22563: result: yes configure:22569: checking for strncmp configure:22569: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 conftest.c:64:6: warning: conflicting types for built-in function 'strncmp'; expected 'int(const char *, const char *, long unsigned int)' [-Wbuiltin-declaration-mismatch] 64 | char strncmp (); | ^~~~~~~ conftest.c:56:1: note: 'strncmp' is declared in header '' 55 | #include 56 | #undef strncmp configure:22569: $? = 0 configure:22569: result: yes configure:22601: checking for bash configure:22637: result: /bin/bash configure:22662: checking for feenableexcept configure:22662: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:22662: $? = 0 configure:22662: result: yes configure:22668: checking whether feenableexcept declaration is usable configure:22692: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 conftest.c: In function 'main': conftest.c:65:1: warning: implicit declaration of function 'feenableexcept'; did you mean 'feraiseexcept'? [-Wimplicit-function-declaration] 65 | feenableexcept(0); | ^~~~~~~~~~~~~~ | feraiseexcept configure:22692: $? = 0 configure:22701: result: yes configure:22771: updating cache ../config.cache configure:22819: checking that generated files are newer than configure configure:22825: result: done configure:22864: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by mpb config.status 1.11.1, which was generated by GNU Autoconf 2.71. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on lgw01-amd64-003 config.status:1213: creating Makefile config.status:1213: creating examples/Makefile config.status:1213: creating tests/Makefile config.status:1213: creating src/Makefile config.status:1213: creating src/util/Makefile config.status:1213: creating src/matrices/Makefile config.status:1213: creating src/matrixio/Makefile config.status:1213: creating src/maxwell/Makefile config.status:1213: creating mpb/Makefile config.status:1213: creating mpb/mpb.scm config.status:1213: creating mpb/mpb-split-preinstall config.status:1213: creating utils/Makefile config.status:1213: creating config.h config.status:1213: creating src/mpbconf.h config.status:1442: executing depfiles commands config.status:1519: cd tests && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/tests' make[2]: Leaving directory '/<>/tests' config.status:1524: $? = 0 config.status:1519: cd src/util && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/src/util' make[2]: Leaving directory '/<>/src/util' config.status:1524: $? = 0 config.status:1519: cd src/matrices && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/src/matrices' make[2]: Leaving directory '/<>/src/matrices' config.status:1524: $? = 0 config.status:1519: cd src/matrixio && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/src/matrixio' make[2]: Leaving directory '/<>/src/matrixio' config.status:1524: $? = 0 config.status:1519: cd src/maxwell && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/src/maxwell' make[2]: Leaving directory '/<>/src/maxwell' config.status:1524: $? = 0 config.status:1519: cd mpb && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/mpb' make[2]: Leaving directory '/<>/mpb' config.status:1524: $? = 0 config.status:1519: cd utils && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/utils' make[2]: Leaving directory '/<>/utils' config.status:1524: $? = 0 config.status:1442: executing libtool commands ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_c_inline=inline ac_cv_env_CC_set=set ac_cv_env_CC_value=mpicc ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value='-g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC' ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value='-Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi' ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_F77_set=set ac_cv_env_F77_value=gfortran ac_cv_env_FFLAGS_set=set ac_cv_env_FFLAGS_value='-g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong' ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_MPICC_set= ac_cv_env_MPICC_value= ac_cv_env_build_alias_set=set ac_cv_env_build_alias_value=x86_64-linux-gnu ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=yes ac_cv_f77_dummy_main=none ac_cv_f77_libs=' -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath' ac_cv_f77_mangling='lower case, underscore, no extra underscore' ac_cv_fortran_dummy_main=none ac_cv_func_cheev_=no ac_cv_func_feenableexcept=yes ac_cv_func_getopt=yes ac_cv_func_scm_array_get_handle=yes ac_cv_func_scm_is_array=yes ac_cv_func_scm_make_smob_type=yes ac_cv_func_strncmp=yes ac_cv_header_ctl_h=yes ac_cv_header_ctlgeom_h=yes ac_cv_header_dlfcn_h=yes ac_cv_header_getopt_h=yes ac_cv_header_guile_gh_h=no ac_cv_header_hdf5_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_libguile_h=yes ac_cv_header_nlopt_h=no ac_cv_header_stdint_h=yes ac_cv_header_stdio_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_atlas_ATL_xerbla=no ac_cv_lib_blas_sgemm_=yes ac_cv_lib_complib_sgimath_sgemm_=no ac_cv_lib_ctl_ctl_get_vector3=yes ac_cv_lib_ctlgeom_vector3_dot=yes ac_cv_lib_cxml_sgemm_=no ac_cv_lib_dgemm_dgemm_=no ac_cv_lib_dxml_sgemm_=no ac_cv_lib_essl_sgemm_=no ac_cv_lib_fftw3_fftw_execute=yes ac_cv_lib_hdf5_H5Pcreate=yes ac_cv_lib_lapack_cheev_=yes ac_cv_lib_m_sqrt=yes ac_cv_lib_mkl_sgemm_=no ac_cv_lib_nlopt_nlopt_minimize=no ac_cv_lib_openblas_sgemm_=no ac_cv_lib_scs_sgemm_=no ac_cv_lib_z_deflate=yes ac_cv_objext=o ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_GREP=/usr/bin/grep ac_cv_path_PERL=/usr/bin/perl ac_cv_path_SED=/usr/bin/sed ac_cv_path_SH_JOB=/bin/bash ac_cv_path_install='/usr/bin/install -c' ac_cv_path_lt_DD=/usr/bin/dd ac_cv_path_mkdir=/usr/bin/mkdir ac_cv_prog_AWK=mawk ac_cv_prog_CC=mpicc ac_cv_prog_CPP='mpicc -E' ac_cv_prog_GEN_CTL_IO=gen-ctl-io ac_cv_prog_GUILE_CONFIG=guile-config ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=mpicc ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c11= ac_cv_prog_cc_g=yes ac_cv_prog_cc_stdc= ac_cv_prog_f77_g=yes ac_cv_prog_f77_v=-v ac_cv_prog_guile_ok=yes ac_cv_prog_make_make_set=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes lt_cv_ar_at_file=@ lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_F77=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_F77=-fPIC lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_F77=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=no lt_cv_prog_compiler_static_works_F77=yes lt_cv_prog_gnu_ld=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=yes lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=1572864 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/usr/bin/dd bs=4096 count=1' ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} '\''/<>/missing'\'' aclocal-1.16' ACTIVATE_READLINE='(use-modules (ice-9 readline)) (activate-readline)' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} '\''/<>/missing'\'' autoconf' AUTOHEADER='${SHELL} '\''/<>/missing'\'' autoheader' AUTOMAKE='${SHELL} '\''/<>/missing'\'' automake-1.16' AWK='mawk' BLAS_LIBS='-lblas' CC='mpicc' CCDEPMODE='depmode=gcc3' CFLAGS='-g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic' CPP='mpicc -E' CPPFLAGS='-Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi' CSCOPE='cscope' CTAGS='ctags' CTLGEOM_H_CPPFLAG=' ' CTL_H_CPPFLAG=' ' CYGPATH_W='echo' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DLLTOOL='false' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/usr/bin/grep -E' EIGS_FLAGS_SCM='(define EIGS_VERBOSE (pow2 0))(define EIGS_PROJECT_PRECONDITIONING (pow2 1))(define EIGS_RESET_CG (pow2 2))(define EIGS_FORCE_EXACT_LINMIN (pow2 3))(define EIGS_FORCE_APPROX_LINMIN (pow2 4))(define EIGS_ORTHONORMALIZE_FIRST_STEP (pow2 5))(define EIGS_REORTHOGONALIZE (pow2 6))(define EIGS_DYNAMIC_RESET_CG (pow2 7))(define EIGS_ORTHOGONAL_PRECONDITIONER (pow2 8))(define EIGS_DEFAULT_FLAGS (+ EIGS_RESET_CG EIGS_REORTHOGONALIZE))' ETAGS='etags' EXEEXT='' F77='gfortran' FFLAGS='-g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong' FGREP='/usr/bin/grep -F' FLIBS=' -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath' GEN_CTL_IO='gen-ctl-io' GREP='/usr/bin/grep' GUILE_CONFIG='guile-config' GUILE_CPPFLAGS='-I/usr/include/guile/3.0' GUILE_LIBS='-lguile-3.0 -lgc' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LAPACK_LIBS='-llapack' LD='/usr/bin/ld -m elf_x86_64' LDFLAGS='-Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi' LIBCTL_DIR='/usr/share/libctl' LIBOBJS='' LIBS='-lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' MAINT='' MAINTAINER_MODE_FALSE='#' MAINTAINER_MODE_TRUE='' MAKEINFO='${SHELL} '\''/<>/missing'\'' makeinfo' MANIFEST_TOOL=':' MKDIR_P='/usr/bin/mkdir -p' MPB_SUFFIX='' MPB_VERSION='1.11.1' MPICC='' MPILIBS='' MPIRUN='' MPI_FALSE='' MPI_TRUE='#' NLOPT_LIB='' NM='/usr/bin/nm -B' NMEDIT='' OBJDUMP='objdump' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='mpb' PACKAGE_BUGREPORT='' PACKAGE_NAME='mpb' PACKAGE_STRING='mpb 1.11.1' PACKAGE_TARNAME='mpb' PACKAGE_URL='' PACKAGE_VERSION='1.11.1' PATH_SEPARATOR=':' PERL='/usr/bin/perl' RANLIB='ranlib' RUNCODE='' SCALAR_TYPE='complex' SED='/usr/bin/sed' SET_MAKE='' SHARED_VERSION_INFO='5:1:4' SHELL='/bin/bash' SH_JOB='/bin/bash' STRIP='strip' VERSION='1.11.1' WITH_LIBCTLGEOM_FALSE='#' WITH_LIBCTLGEOM_TRUE='' WITH_LIBCTL_FALSE='#' WITH_LIBCTL_TRUE='' ac_ct_AR='ar' ac_ct_CC='mpicc' ac_ct_DUMPBIN='' ac_ct_F77='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='x86_64-linux-gnu' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' guile_ok='yes' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /<>/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${prefix}/share/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/usr' program_transform_name='s,_,-,g;s,x,x,' psdir='${docdir}' runstatedir='${localstatedir}/run' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "mpb" #define PACKAGE_TARNAME "mpb" #define PACKAGE_VERSION "1.11.1" #define PACKAGE_STRING "mpb 1.11.1" #define PACKAGE_BUGREPORT "" #define PACKAGE_URL "" #define MPB_VERSION_MAJOR 1 #define MPB_VERSION_MINOR 11 #define MPB_VERSION_PATCH 1 #define PACKAGE "mpb" #define VERSION "1.11.1" #define HAVE_STDIO_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_STRINGS_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_UNISTD_H 1 #define STDC_HEADERS 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define SCALAR_COMPLEX 1 #define HAVE_LIBM 1 #define F77_FUNC(name,NAME) name ## _ #define F77_FUNC_(name,NAME) name ## _ #define HAVE_LIBFFTW3 1 #define HAVE_BLAS 1 #define HAVE_LAPACK 1 #define HAVE_LIBZ 1 #define HAVE_HDF5_H 1 #define HAVE_HDF5 1 #define HAVE_LIBGUILE_H 1 #define HAVE_SCM_MAKE_SMOB_TYPE 1 #define HAVE_SCM_ARRAY_GET_HANDLE 1 #define HAVE_SCM_IS_ARRAY 1 #define HAVE_SCM_SMOB_PREDICATE 1 #define HAVE_SCM_SMOB_DATA 1 #define HAVE_SCM_NEWSMOB 1 #define HAVE_LIBCTL 1 #define HAVE_LIBCTL_QUIET 1 #define HAVE_UNISTD_H 1 #define HAVE_GETOPT_H 1 #define HAVE_GETOPT 1 #define HAVE_STRNCMP 1 #define NO_FORTRAN_FUNCTIONS 1 #define HAVE_FEENABLEEXCEPT 1 #define HAVE_DECL_FEENABLEEXCEPT 1 configure: exit 0 dh_auto_build make -j4 make[2]: Entering directory '/<>' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash '/<>/missing' aclocal-1.16 -I m4 CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash '/<>/missing' autoconf cd . && /bin/bash /<>/missing automake-1.16 --foreign configure.ac:4: warning: The macro `AC_CONFIG_HEADER' is obsolete. configure.ac:4: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:23: warning: The macro `AM_ENABLE_SHARED' is obsolete. configure.ac:23: You should run autoupdate. m4/ltoptions.m4:205: AM_ENABLE_SHARED is expanded from... configure.ac:23: the top level configure.ac:24: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:24: You should run autoupdate. m4/libtool.m4:99: AC_PROG_LIBTOOL is expanded from... configure.ac:24: the top level configure.ac:39: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:39: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:39: the top level configure.ac:45: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:45: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:45: the top level configure.ac:51: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:51: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:51: the top level configure.ac:57: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:57: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:57: the top level configure.ac:62: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:62: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:62: the top level configure.ac:68: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:68: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:68: the top level configure.ac:73: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:73: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:73: the top level configure.ac:86: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:86: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:86: the top level configure.ac:103: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:103: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:103: the top level configure.ac:124: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:124: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:124: the top level configure.ac:125: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:125: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:125: the top level configure.ac:170: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:170: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:170: the top level configure.ac:201: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.ac:201: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... m4/ax_mpi.m4:69: AX_MPI is expanded from... configure.ac:201: the top level configure.ac:258: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:258: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:258: the top level configure.ac:277: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:277: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:277: the top level configure.ac:324: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:324: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:324: the top level configure.ac:337: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:337: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:337: the top level configure.ac:350: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:350: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:350: the top level configure.ac:512: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:512: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:512: the top level configure.ac:528: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:528: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... configure.ac:528: the top level configure.ac:583: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.ac:583: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... configure.ac:583: the top level /bin/bash ./config.status --recheck running CONFIG_SHELL=/bin/bash /bin/bash ./configure --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode build_alias=x86_64-linux-gnu CC=mpicc CFLAGS=-g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC LDFLAGS=-Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi CPPFLAGS=-Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi F77=gfortran FFLAGS=-g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong --no-create --no-recursion configure: loading cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... (cached) /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... (cached) /usr/bin/mkdir -p checking for gawk... (cached) mawk checking whether make sets $(MAKE)... (cached) yes checking whether make supports nested variables... (cached) yes checking whether make supports nested variables... (cached) yes checking build system type... (cached) x86_64-pc-linux-gnu checking host system type... (cached) x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... (cached) o checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/grep -E checking for fgrep... (cached) /usr/bin/grep -F checking for ld used by mpicc... (cached) /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... (cached) yes checking for BSD- or MS-compatible name lister (nm)... (cached) /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... (cached) func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... (cached) func_convert_file_noop checking for /usr/bin/ld option to reload object files... (cached) -r checking for objdump... (cached) objdump checking how to recognize dependent libraries... (cached) pass_all checking for dlltool... no checking how to associate runtime and link libraries... (cached) printf %s\n checking for ar... (cached) ar checking for archiver @FILE support... (cached) @ checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from mpicc object... (cached) ok checking for sysroot... no checking for a working dd... (cached) /usr/bin/dd checking how to truncate binary pipes... (cached) /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... (cached) no checking for stdio.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for strings.h... (cached) yes checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... (cached) .libs checking if mpicc supports -fno-rtti -fno-exceptions... (cached) no checking for mpicc option to produce PIC... (cached) -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... (cached) yes checking if mpicc static flag -static works... (cached) no checking if mpicc supports -c -o file.o... (cached) yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether the compiler supports GNU Fortran 77... (cached) yes checking whether gfortran accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... (cached) -fPIC checking if gfortran PIC flag -fPIC works... (cached) yes checking if gfortran static flag -static works... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... (cached) /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... (cached) mpicc checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for sqrt in -lm... (cached) yes checking how to get verbose linking output from gfortran... (cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... (cached) none checking for Fortran 77 name-mangling scheme... (cached) lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... (cached) yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... (cached) no checking for ATL_xerbla in -latlas... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for dgemm_ in -ldgemm... (cached) no checking for sgemm_ in -lmkl... (cached) no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... (cached) no checking for sgemm_ in -ldxml... (cached) no checking for sgemm_ in -lscs... (cached) no checking for sgemm_ in -lcomplib.sgimath... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... (cached) no checking for cheev_ in -llapack... (cached) yes checking for deflate in -lz... (cached) yes checking for H5Pcreate in -lhdf5... (cached) yes checking for hdf5.h... (cached) yes checking for guile... (cached) yes checking for guile-config... (cached) guile-config checking if linking to guile works... yes checking for libguile.h... (cached) yes checking for guile/gh.h... (cached) no checking for scm_make_smob_type... (cached) yes checking for scm_array_get_handle... (cached) yes checking for scm_is_array... (cached) yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... (cached) gen-ctl-io checking for ctl_get_vector3 in -lctl... (cached) yes checking for ctl.h... (cached) yes checking whether libctl version is at least 4.0.0... checking how to run the C preprocessor... (cached) mpicc -E ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... (cached) yes checking for ctlgeom.h... (cached) yes checking for nlopt.h... (cached) no checking for nlopt_minimize in -lnlopt... (cached) no checking for egrep... (cached) /usr/bin/grep -E checking for unistd.h... (cached) yes checking for getopt.h... (cached) yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... (cached) yes checking for inline... (cached) inline checking for getopt... (cached) yes checking for strncmp... (cached) yes checking whether calling BLAS zdotc works... yes checking for bash... (cached) /bin/bash checking for feenableexcept... (cached) yes checking whether feenableexcept declaration is usable... yes checking that generated files are newer than configure... done configure: creating ./config.status /bin/bash ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: src/mpbconf.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash '/<>/missing' autoheader) rm -f stamp-h1 touch config.h.in cd . && /bin/bash ./config.status config.h config.status: creating config.h config.status: config.h is unchanged make all-recursive make[3]: Entering directory '/<>' Making all in src make[4]: Entering directory '/<>/src' cp -f mpbconf.h mpb.h make all-recursive make[5]: Entering directory '/<>/src' Making all in util make[6]: Entering directory '/<>/src/util' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT sphere-quad.o -MD -MP -MF .deps/sphere-quad.Tpo -c -o sphere-quad.o sphere-quad.c mv -f .deps/sphere-quad.Tpo .deps/sphere-quad.Po /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -llapack -lblas -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../../src/util/sphere_quad) > sphere-quad.h make all-am make[7]: Entering directory '/<>/src/util' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c -o debug_malloc.lo debug_malloc.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c -o mpi_utils.lo mpi_utils.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c -o verbosity.lo verbosity.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c mpi_utils.c -o mpi_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c debug_malloc.c -o debug_malloc.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c verbosity.c -o verbosity.o mv -f .deps/verbosity.Tpo .deps/verbosity.Plo mpi_utils.c: In function ‘mpi_begin_critical_section’: mpi_utils.c:202:22: warning: unused variable ‘status’ [-Wunused-variable] 202 | MPI_Status status; | ^~~~~~ mpi_utils.c: In function ‘mpi_end_critical_section’: mpi_utils.c:210:35: warning: unused parameter ‘tag’ [-Wunused-parameter] 210 | void mpi_end_critical_section(int tag) | ~~~~^~~ mpi_utils.c: In function ‘mpi_one_printf’: mpi_utils.c:139:10: warning: ignoring return value of ‘vasprintf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 139 | vasprintf(&s, template, ap); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mv -f .deps/debug_malloc.Tpo .deps/debug_malloc.Plo mv -f .deps/mpi_utils.Tpo .deps/mpi_utils.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libutil.la debug_malloc.lo mpi_utils.lo verbosity.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libutil.a debug_malloc.o mpi_utils.o verbosity.o libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' Making all in matrices make[6]: Entering directory '/<>/src/matrices' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c -o libmatrices_la-blasglue.lo `test -f 'blasglue.c' || echo './'`blasglue.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c -o libmatrices_la-eigensolver.lo `test -f 'eigensolver.c' || echo './'`eigensolver.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c -o libmatrices_la-eigensolver_davidson.lo `test -f 'eigensolver_davidson.c' || echo './'`eigensolver_davidson.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c -o libmatrices_la-eigensolver_utils.lo `test -f 'eigensolver_utils.c' || echo './'`eigensolver_utils.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c eigensolver_utils.c -o libmatrices_la-eigensolver_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c eigensolver.c -o libmatrices_la-eigensolver.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c blasglue.c -o libmatrices_la-blasglue.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c eigensolver_davidson.c -o libmatrices_la-eigensolver_davidson.o mv -f .deps/libmatrices_la-eigensolver_utils.Tpo .deps/libmatrices_la-eigensolver_utils.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c -o libmatrices_la-evectmatrix.lo `test -f 'evectmatrix.c' || echo './'`evectmatrix.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c evectmatrix.c -o libmatrices_la-evectmatrix.o mv -f .deps/libmatrices_la-blasglue.Tpo .deps/libmatrices_la-blasglue.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c -o libmatrices_la-linmin.lo `test -f 'linmin.c' || echo './'`linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c linmin.c -o libmatrices_la-linmin.o mv -f .deps/libmatrices_la-eigensolver_davidson.Tpo .deps/libmatrices_la-eigensolver_davidson.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c -o libmatrices_la-matrices.lo `test -f 'matrices.c' || echo './'`matrices.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c matrices.c -o libmatrices_la-matrices.o mv -f .deps/libmatrices_la-linmin.Tpo .deps/libmatrices_la-linmin.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c -o libmatrices_la-minpack2-linmin.lo `test -f 'minpack2-linmin.c' || echo './'`minpack2-linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c minpack2-linmin.c -o libmatrices_la-minpack2-linmin.o mv -f .deps/libmatrices_la-evectmatrix.Tpo .deps/libmatrices_la-evectmatrix.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c -o libmatrices_la-sqmatrix.lo `test -f 'sqmatrix.c' || echo './'`sqmatrix.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c sqmatrix.c -o libmatrices_la-sqmatrix.o mv -f .deps/libmatrices_la-matrices.Tpo .deps/libmatrices_la-matrices.Plo mv -f .deps/libmatrices_la-minpack2-linmin.Tpo .deps/libmatrices_la-minpack2-linmin.Plo mv -f .deps/libmatrices_la-sqmatrix.Tpo .deps/libmatrices_la-sqmatrix.Plo mv -f .deps/libmatrices_la-eigensolver.Tpo .deps/libmatrices_la-eigensolver.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmatrices.la libmatrices_la-blasglue.lo libmatrices_la-eigensolver.lo libmatrices_la-eigensolver_davidson.lo libmatrices_la-eigensolver_utils.lo libmatrices_la-evectmatrix.lo libmatrices_la-linmin.lo libmatrices_la-matrices.lo libmatrices_la-minpack2-linmin.lo libmatrices_la-sqmatrix.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmatrices.a libmatrices_la-blasglue.o libmatrices_la-eigensolver.o libmatrices_la-eigensolver_davidson.o libmatrices_la-eigensolver_utils.o libmatrices_la-evectmatrix.o libmatrices_la-linmin.o libmatrices_la-matrices.o libmatrices_la-minpack2-linmin.o libmatrices_la-sqmatrix.o libtool: link: ranlib .libs/libmatrices.a libtool: link: ( cd ".libs" && rm -f "libmatrices.la" && ln -s "../libmatrices.la" "libmatrices.la" ) make[6]: Leaving directory '/<>/src/matrices' Making all in matrixio make[6]: Entering directory '/<>/src/matrixio' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-evectmatrixio.o -MD -MP -MF .deps/libmatrixio_a-evectmatrixio.Tpo -c -o libmatrixio_a-evectmatrixio.o `test -f 'evectmatrixio.c' || echo './'`evectmatrixio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-fieldio.o -MD -MP -MF .deps/libmatrixio_a-fieldio.Tpo -c -o libmatrixio_a-fieldio.o `test -f 'fieldio.c' || echo './'`fieldio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-matrixio.o -MD -MP -MF .deps/libmatrixio_a-matrixio.Tpo -c -o libmatrixio_a-matrixio.o `test -f 'matrixio.c' || echo './'`matrixio.c matrixio.c: In function ‘matrixio_create_sub’: matrixio.c:469:24: warning: statement with no effect [-Wunused-value] 469 | IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); | ^ matrixio.c:58:32: note: in definition of macro ‘IF_EXCLUSIVE’ 58 | # define IF_EXCLUSIVE(yes,no) yes | ^~~ matrixio.c:472:24: warning: statement with no effect [-Wunused-value] 472 | IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); | ^ matrixio.c:58:32: note: in definition of macro ‘IF_EXCLUSIVE’ 58 | # define IF_EXCLUSIVE(yes,no) yes | ^~~ In file included from matrixio.c:29: matrixio.c: In function ‘matrixio_open_dataset’: matrixio.c:516:30: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 516 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ matrixio.c: In function ‘matrixio_create_dataset’: matrixio.c:552:24: warning: statement with no effect [-Wunused-value] 552 | IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); | ^ matrixio.c:58:32: note: in definition of macro ‘IF_EXCLUSIVE’ 58 | # define IF_EXCLUSIVE(yes,no) yes | ^~~ In file included from matrixio.c:29: matrixio.c: In function ‘matrixio_read_real_data’: matrixio.c:837:35: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 837 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fieldio.c:41:46: warning: argument 8 of type ‘const real *’ {aka ‘const double *’} declared as a pointer [-Warray-parameter=] 41 | const real *kvector, | ~~~~~~~~~~~~^~~~~~~ In file included from fieldio.c:28: matrixio.h:95:52: note: previously declared as an array ‘const real[3]’ {aka ‘const double[3]’} 95 | const real kvector[3], | ~~~~~~~~~~~^~~~~~~~~~ mv -f .deps/libmatrixio_a-evectmatrixio.Tpo .deps/libmatrixio_a-evectmatrixio.Po mv -f .deps/libmatrixio_a-fieldio.Tpo .deps/libmatrixio_a-fieldio.Po mv -f .deps/libmatrixio_a-matrixio.Tpo .deps/libmatrixio_a-matrixio.Po rm -f libmatrixio.a ar cru libmatrixio.a libmatrixio_a-evectmatrixio.o libmatrixio_a-fieldio.o libmatrixio_a-matrixio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmatrixio.a make[6]: Leaving directory '/<>/src/matrixio' Making all in maxwell make[6]: Entering directory '/<>/src/maxwell' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c -o libmaxwell_la-maxwell.lo `test -f 'maxwell.c' || echo './'`maxwell.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c -o libmaxwell_la-maxwell_constraints.lo `test -f 'maxwell_constraints.c' || echo './'`maxwell_constraints.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c -o libmaxwell_la-maxwell_eps.lo `test -f 'maxwell_eps.c' || echo './'`maxwell_eps.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c -o libmaxwell_la-maxwell_op.lo `test -f 'maxwell_op.c' || echo './'`maxwell_op.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c maxwell_eps.c -o libmaxwell_la-maxwell_eps.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c maxwell_constraints.c -o libmaxwell_la-maxwell_constraints.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c maxwell.c -o libmaxwell_la-maxwell.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c maxwell_op.c -o libmaxwell_la-maxwell_op.o maxwell_op.c: In function ‘maxwell_compute_fft’: maxwell_eps.c: In function ‘set_maxwell_dielectric’: maxwell_op.c:187:21: warning: variable ‘np’ set but not used [-Wunused-but-set-variable] 187 | ptrdiff_t np[3]; | ^~ maxwell_eps.c:395:16: warning: unused variable ‘k’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:13: warning: unused variable ‘j’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:10: warning: unused variable ‘i’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_op.c:177:12: warning: unused variable ‘rarray_out’ [-Wunused-variable] 177 | real *rarray_out = (real *) array_out; | ^~~~~~~~~~ maxwell_op.c:175:12: warning: unused variable ‘rarray_in’ [-Wunused-variable] 175 | real *rarray_in = (real *) array_in; | ^~~~~~~~~ maxwell_op.c: In function ‘maxwell_vectorfield_otherhalf’: maxwell_op.c:637:50: warning: unused parameter ‘d’ [-Wunused-parameter] 637 | void maxwell_vectorfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~^ maxwell_op.c:637:69: warning: unused parameter ‘field’ [-Wunused-parameter] 637 | void maxwell_vectorfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~~~^~~~~ maxwell_op.c:638:41: warning: unused parameter ‘phasex’ [-Wunused-parameter] 638 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:638:54: warning: unused parameter ‘phasey’ [-Wunused-parameter] 638 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:638:67: warning: unused parameter ‘phasez’ [-Wunused-parameter] 638 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c: In function ‘maxwell_cscalarfield_otherhalf’: maxwell_op.c:841:51: warning: unused parameter ‘d’ [-Wunused-parameter] 841 | void maxwell_cscalarfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~^ At top level: maxwell_eps.c:181:12: warning: ‘sym_matrix_eq’ defined but not used [-Wunused-function] 181 | static int sym_matrix_eq(symmetric_matrix V1, symmetric_matrix V2, double tol) | ^~~~~~~~~~~~~ maxwell_op.c:841:70: warning: unused parameter ‘field’ [-Wunused-parameter] 841 | void maxwell_cscalarfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~~~^~~~~ maxwell_op.c:842:42: warning: unused parameter ‘phasex’ [-Wunused-parameter] 842 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:842:55: warning: unused parameter ‘phasey’ [-Wunused-parameter] 842 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:842:68: warning: unused parameter ‘phasez’ [-Wunused-parameter] 842 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c: In function ‘maxwell_scalarfield_otherhalf’: maxwell_op.c:1042:50: warning: unused parameter ‘d’ [-Wunused-parameter] 1042 | void maxwell_scalarfield_otherhalf(maxwell_data *d, real *field) | ~~~~~~~~~~~~~~^ maxwell_op.c:1042:59: warning: unused parameter ‘field’ [-Wunused-parameter] 1042 | void maxwell_scalarfield_otherhalf(maxwell_data *d, real *field) | ~~~~~~^~~~~ mv -f .deps/libmaxwell_la-maxwell.Tpo .deps/libmaxwell_la-maxwell.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c -o libmaxwell_la-maxwell_pre.lo `test -f 'maxwell_pre.c' || echo './'`maxwell_pre.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c maxwell_pre.c -o libmaxwell_la-maxwell_pre.o mv -f .deps/libmaxwell_la-maxwell_constraints.Tpo .deps/libmaxwell_la-maxwell_constraints.Plo mv -f .deps/libmaxwell_la-maxwell_eps.Tpo .deps/libmaxwell_la-maxwell_eps.Plo mv -f .deps/libmaxwell_la-maxwell_op.Tpo .deps/libmaxwell_la-maxwell_op.Plo mv -f .deps/libmaxwell_la-maxwell_pre.Tpo .deps/libmaxwell_la-maxwell_pre.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmaxwell.la libmaxwell_la-maxwell.lo libmaxwell_la-maxwell_constraints.lo libmaxwell_la-maxwell_eps.lo libmaxwell_la-maxwell_op.lo libmaxwell_la-maxwell_pre.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmaxwell.a libmaxwell_la-maxwell.o libmaxwell_la-maxwell_constraints.o libmaxwell_la-maxwell_eps.o libmaxwell_la-maxwell_op.o libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmaxwell.a libtool: link: ( cd ".libs" && rm -f "libmaxwell.la" && ln -s "../libmaxwell.la" "libmaxwell.la" ) make[6]: Leaving directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -no-undefined -version-info 5:1:4 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmpb.la -rpath /usr/lib util/libutil.la matrices/libmatrices.la maxwell/libmaxwell.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: (cd .libs/libmpb.lax/libutil.a && ar x "/<>/src/util/.libs/libutil.a") libtool: link: (cd .libs/libmpb.lax/libmatrices.a && ar x "/<>/src/matrices/.libs/libmatrices.a") libtool: link: (cd .libs/libmpb.lax/libmaxwell.a && ar x "/<>/src/maxwell/.libs/libmaxwell.a") libtool: link: ar cr .libs/libmpb.a .libs/libmpb.lax/libutil.a/debug_malloc.o .libs/libmpb.lax/libutil.a/mpi_utils.o .libs/libmpb.lax/libutil.a/verbosity.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-blasglue.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-eigensolver.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-eigensolver_davidson.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-eigensolver_utils.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-evectmatrix.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-linmin.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-matrices.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-minpack2-linmin.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-sqmatrix.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell_constraints.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell_eps.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell_op.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmpb.a libtool: link: rm -fr .libs/libmpb.lax libtool: link: ( cd ".libs" && rm -f "libmpb.la" && ln -s "../libmpb.la" "libmpb.la" ) make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' Making all in tests make[4]: Entering directory '/<>/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT malloctest.o -MD -MP -MF .deps/malloctest.Tpo -c -o malloctest.o malloctest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT blastest.o -MD -MP -MF .deps/blastest.Tpo -c -o blastest.o blastest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT eigs_test.o -MD -MP -MF .deps/eigs_test.Tpo -c -o eigs_test.o eigs_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT maxwell_test.o -MD -MP -MF .deps/maxwell_test.Tpo -c -o maxwell_test.o maxwell_test.c eigs_test.c: In function ‘Aop’: eigs_test.c:293:51: warning: unused parameter ‘data’ [-Wunused-parameter] 293 | void Aop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:294:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:294:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Bop’: eigs_test.c:303:51: warning: unused parameter ‘data’ [-Wunused-parameter] 303 | void Bop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:304:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:304:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Ainvop’: eigs_test.c:313:54: warning: unused parameter ‘data’ [-Wunused-parameter] 313 | void Ainvop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:314:25: warning: unused parameter ‘Y’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:314:34: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c:314:54: warning: unused parameter ‘YtY’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~^~~ eigs_test.c: In function ‘Cop_old’: eigs_test.c:324:55: warning: unused parameter ‘data’ [-Wunused-parameter] 324 | void Cop_old(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:325:22: warning: unused parameter ‘Y’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:325:31: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c: In function ‘Cop’: eigs_test.c:349:51: warning: unused parameter ‘data’ [-Wunused-parameter] 349 | void Cop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:350:23: warning: unused parameter ‘Y’ [-Wunused-parameter] 350 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ mv -f .deps/malloctest.Tpo .deps/malloctest.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT normal_vectors-normal_vectors.o -MD -MP -MF .deps/normal_vectors-normal_vectors.Tpo -c -o normal_vectors-normal_vectors.o `test -f 'normal_vectors.c' || echo './'`normal_vectors.c mv -f .deps/blastest.Tpo .deps/blastest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/normal_vectors-normal_vectors.Tpo .deps/normal_vectors-normal_vectors.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/maxwell_test.Tpo .deps/maxwell_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/eigs_test.Tpo .deps/eigs_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/<>/tests' Making all in mpb make[4]: Entering directory '/<>/mpb' cp -f /usr/share/libctl/base/main.c main.c cp -f /usr/share/libctl/utils/geom.c geom.c gen-ctl-io --header -o ctl-io.h mpb.scm /usr/share/libctl gen-ctl-io --code -o ctl-io.c mpb.scm /usr/share/libctl /usr/bin/perl -pe 's/epsilon/mu/g;s/eps_inv/mu_inv/g' epsilon.c > mu.c ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" make all-am make[5]: Entering directory '/<>/mpb' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-medium.o -MD -MP -MF .deps/mpb-medium.Tpo -c -o mpb-medium.o `test -f 'medium.c' || echo './'`medium.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-epsilon_file.o -MD -MP -MF .deps/mpb-epsilon_file.Tpo -c -o mpb-epsilon_file.o `test -f 'epsilon_file.c' || echo './'`epsilon_file.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-field-smob.o -MD -MP -MF .deps/mpb-field-smob.Tpo -c -o mpb-field-smob.o `test -f 'field-smob.c' || echo './'`field-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-fields.o -MD -MP -MF .deps/mpb-fields.Tpo -c -o mpb-fields.o `test -f 'fields.c' || echo './'`fields.c field-smob.c: In function ‘integrate_fieldL’: field-smob.c:407:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ field-smob.c:407:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ field-smob.c:407:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ field-smob.c:407:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ At top level: field-smob.c:395:17: warning: ‘cvector3_conj’ defined but not used [-Wunused-function] 395 | static cvector3 cvector3_conj(cvector3 c) | ^~~~~~~~~~~~~ In file included from medium.c:75: epsilon.c: In function ‘get_epsilon’: epsilon.c:434:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ epsilon.c:434:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ epsilon.c:434:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ epsilon.c:434:26: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ epsilon.c:434:16: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ In file included from medium.c:76: mu.c: In function ‘get_mu’: mu.c:434:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ mu.c:434:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ mu.c:434:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ mu.c:434:26: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ mu.c:434:16: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ fields.c: In function ‘compute_field_energy_internal’: fields.c:229:50: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ fields.c:229:46: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:229:42: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:229:25: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ fields.c:229:15: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ fields.c: In function ‘get_val’: fields.c:557:25: warning: unused parameter ‘nx’ [-Wunused-parameter] 557 | int nx, int ny, int nz, int last_dim_size, | ~~~~^~ fields.c:557:49: warning: unused parameter ‘last_dim_size’ [-Wunused-parameter] 557 | int nx, int ny, int nz, int last_dim_size, | ~~~~^~~~~~~~~~~~~ fields.c: In function ‘compute_energy_in_dielectric’: fields.c:873:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ fields.c:873:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:873:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:873:26: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ fields.c:873:16: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ fields.c: In function ‘output_scalarfield’: fields.c:946:36: warning: unused parameter ‘last_dim_index’ [-Wunused-parameter] 946 | int last_dim_index, | ~~~~^~~~~~~~~~~~~~ fields.c:947:36: warning: unused parameter ‘last_dim_start’ [-Wunused-parameter] 947 | int last_dim_start, int last_dim_size, | ~~~~^~~~~~~~~~~~~~ fields.c:947:56: warning: unused parameter ‘last_dim_size’ [-Wunused-parameter] 947 | int last_dim_start, int last_dim_size, | ~~~~^~~~~~~~~~~~~ fields.c:948:36: warning: unused parameter ‘first_dim_start’ [-Wunused-parameter] 948 | int first_dim_start, int first_dim_size, | ~~~~^~~~~~~~~~~~~~~ fields.c:948:57: warning: unused parameter ‘first_dim_size’ [-Wunused-parameter] 948 | int first_dim_start, int first_dim_size, | ~~~~^~~~~~~~~~~~~~ fields.c:949:36: warning: unused parameter ‘write_start0_special’ [-Wunused-parameter] 949 | int write_start0_special) | ~~~~^~~~~~~~~~~~~~~~~~~~ fields.c: In function ‘compute_energy_in_object_list’: fields.c:1322:6: warning: ‘geom_fix_objects0’ is deprecated [-Wdeprecated-declarations] 1322 | geom_fix_objects0(objects); | ^~~~~~~~~~~~~~~~~ In file included from fields.c:33: /usr/include/ctlgeom.h:65:13: note: declared here 65 | extern void geom_fix_objects0(GEOMETRIC_OBJECT_LIST geometry) CTLGEOM_DEPRECATED; | ^~~~~~~~~~~~~~~~~ fields.c:1309:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ fields.c:1309:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1309:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1309:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1309:16: warning: unused variable ‘k’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1309:13: warning: unused variable ‘j’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1309:10: warning: unused variable ‘i’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_field_integral’: fields.c:1377:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ fields.c:1377:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1377:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1377:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1377:16: warning: unused variable ‘k’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:13: warning: unused variable ‘j’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:10: warning: unused variable ‘i’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ mv -f .deps/mpb-epsilon_file.Tpo .deps/mpb-epsilon_file.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-material_grid.o -MD -MP -MF .deps/mpb-material_grid.Tpo -c -o mpb-material_grid.o `test -f 'material_grid.c' || echo './'`material_grid.c mu.c: In function ‘mean_mu_func’: mu.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ mu.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ material_grid.c: In function ‘material_grids_addgradient’: material_grid.c:390:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ material_grid.c:390:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:390:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:390:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ material_grid.c:390:16: warning: unused variable ‘k’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:13: warning: unused variable ‘j’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: In function ‘print_material_grids_deps_du_numeric’: material_grid.c:634:14: warning: unused variable ‘foo’ [-Wunused-variable] 634 | double *foo; | ^~~ In file included from material_grid.c:25: material_grid.c: In function ‘synchronize_material_grid’: ../src/util/mpiglue.h:58:40: warning: statement with no effect [-Wunused-value] 58 | #define MPI_Bcast(b, n, t, root, comm) 0 | ^ material_grid.c:693:6: note: in expansion of macro ‘MPI_Bcast’ 693 | MPI_Bcast(grid, n, MPI_DOUBLE, 0, mpb_comm); | ^~~~~~~~~ material_grid.c:691:10: warning: unused variable ‘n’ [-Wunused-variable] 691 | int n = ((int) g->size.x) * ((int) g->size.y) * ((int) g->size.z); | ^ material_grid.c:690:14: warning: variable ‘grid’ set but not used [-Wunused-but-set-variable] 690 | double *grid; | ^~~~ material_grid.c: In function ‘match_eps_func’: material_grid.c:816:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ material_grid.c:816:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:816:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:816:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ At top level: material_grid.c:807:15: warning: ‘match_eps_func’ defined but not used [-Wunused-function] 807 | static double match_eps_func(int n, const double *u, double *grad, void *data) | ^~~~~~~~~~~~~~ In file included from medium.c:75: epsilon.c: In function ‘mean_epsilon_func’: epsilon.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ epsilon.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ mv -f .deps/mpb-field-smob.Tpo .deps/mpb-field-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-material_grid_opt.o -MD -MP -MF .deps/mpb-material_grid_opt.Tpo -c -o mpb-material_grid_opt.o `test -f 'material_grid_opt.c' || echo './'`material_grid_opt.c material_grid_opt.c: In function ‘material_grids_min_tetm_gap’: material_grid_opt.c:90:43: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 90 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:91:44: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:91:60: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ material_grid_opt.c: In function ‘material_grids_maxmin_gap’: material_grid_opt.c:258:48: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 258 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:259:49: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:259:65: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ mv -f .deps/mpb-material_grid_opt.Tpo .deps/mpb-material_grid_opt.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-matrix-smob.o -MD -MP -MF .deps/mpb-matrix-smob.Tpo -c -o mpb-matrix-smob.o `test -f 'matrix-smob.c' || echo './'`matrix-smob.c mv -f .deps/mpb-medium.Tpo .deps/mpb-medium.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-mpb.o -MD -MP -MF .deps/mpb-mpb.Tpo -c -o mpb-mpb.o `test -f 'mpb.c' || echo './'`mpb.c In file included from mpb.c:35: mpb.c: In function ‘ctl_start_hook’: ../src/util/mpiglue.h:42:29: warning: statement with no effect [-Wunused-value] 42 | #define MPI_Init(argc,argv) 0 | ^ mpb.c:99:6: note: in expansion of macro ‘MPI_Init’ 99 | MPI_Init(argc, argv); | ^~~~~~~~ mpb.c:97:26: warning: unused parameter ‘argc’ [-Wunused-parameter] 97 | void ctl_start_hook(int *argc, char ***argv) | ~~~~~^~~~ mpb.c:97:40: warning: unused parameter ‘argv’ [-Wunused-parameter] 97 | void ctl_start_hook(int *argc, char ***argv) | ~~~~~~~~^~~~ In file included from mpb.c:35: mpb.c: In function ‘ctl_stop_hook’: ../src/util/mpiglue.h:43:24: warning: statement with no effect [-Wunused-value] 43 | #define MPI_Finalize() 0 | ^ mpb.c:143:6: note: in expansion of macro ‘MPI_Finalize’ 143 | MPI_Finalize(); | ^~~~~~~~~~~~ mv -f .deps/mpb-fields.Tpo .deps/mpb-fields.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-main.o -MD -MP -MF .deps/mpb-main.Tpo -c -o mpb-main.o `test -f 'main.c' || echo './'`main.c In file included from ctl-io.h:7, from main.c:37: main.c: In function ‘main_entry’: main.c:194:31: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 194 | gh_new_procedure("subplex", (SCM(*)(void))subplex_scm, 7, 0, 0); | ^ main.c:202:44: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 202 | gh_new_procedure("adaptive-integration", (SCM(*)(void))adaptive_integration_scm, 6, 0, 0); | ^ main.c:205:45: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^ mv -f .deps/mpb-material_grid.Tpo .deps/mpb-material_grid.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-geom.o -MD -MP -MF .deps/mpb-geom.Tpo -c -o mpb-geom.o `test -f 'geom.c' || echo './'`geom.c mv -f .deps/mpb-matrix-smob.Tpo .deps/mpb-matrix-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-ctl-io.o -MD -MP -MF .deps/mpb-ctl-io.Tpo -c -o mpb-ctl-io.o `test -f 'ctl-io.c' || echo './'`ctl-io.c mv -f .deps/mpb-main.Tpo .deps/mpb-main.Po sed "s%\./mpb%"/usr/bin/"mpb%g" \ mpb-split-preinstall > mpb-split chmod u+x mpb-split geom.c: In function ‘overlap_integrand’: geom.c:1156:10: warning: unused variable ‘s’ [-Wunused-variable] 1156 | double s[2]; | ^ geom.c: In function ‘point_in_or_on_prism’: geom.c:2110:10: warning: unused variable ‘height’ [-Wunused-variable] 2110 | double height = prsm->height; | ^~~~~~ geom.c: In function ‘dcmp’: geom.c:2137:17: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c:2137:40: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c: In function ‘normal_to_prism’: geom.c:2357:11: warning: unused variable ‘axisp’ [-Wunused-variable] 2357 | vector3 axisp = vector3_scale(height, zhatp); | ^~~~~ geom.c: In function ‘triangle_normal’: geom.c:2548:10: warning: unused variable ‘nvnorm’ [-Wunused-variable] 2548 | double nvnorm = vector3_norm(nv); | ^~~~~~ ctl-io.c: In function ‘block_equal’: ctl-io.c:639:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 639 | else ; | ^ ctl-io.c: In function ‘cylinder_equal’: ctl-io.c:679:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 679 | else ; | ^ ctl-io.c: In function ‘geometric_object_equal’: ctl-io.c:716:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 716 | else ; | ^ ctl-io.c: In function ‘material_type_equal’: ctl-io.c:776:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 776 | else ; | ^ ctl-io.c: In function ‘lattice_destroy’: ctl-io.c:782:30: warning: unused parameter ‘o’ [-Wunused-parameter] 782 | void lattice_destroy(lattice o) | ~~~~~~~~^ ctl-io.c: In function ‘ellipsoid_destroy’: ctl-io.c:786:34: warning: unused parameter ‘o’ [-Wunused-parameter] 786 | void ellipsoid_destroy(ellipsoid o) | ~~~~~~~~~~^ ctl-io.c: In function ‘sphere_destroy’: ctl-io.c:845:28: warning: unused parameter ‘o’ [-Wunused-parameter] 845 | void sphere_destroy(sphere o) | ~~~~~~~^ ctl-io.c: In function ‘wedge_destroy’: ctl-io.c:849:26: warning: unused parameter ‘o’ [-Wunused-parameter] 849 | void wedge_destroy(wedge o) | ~~~~~~^ ctl-io.c: In function ‘cone_destroy’: ctl-io.c:853:24: warning: unused parameter ‘o’ [-Wunused-parameter] 853 | void cone_destroy(cone o) | ~~~~~^ ctl-io.c: In function ‘material_grid_destroy’: ctl-io.c:907:42: warning: unused parameter ‘o’ [-Wunused-parameter] 907 | void material_grid_destroy(material_grid o) | ~~~~~~~~~~~~~~^ ctl-io.c: In function ‘material_function_destroy’: ctl-io.c:911:50: warning: unused parameter ‘o’ [-Wunused-parameter] 911 | void material_function_destroy(material_function o) | ~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_anisotropic_destroy’: ctl-io.c:915:52: warning: unused parameter ‘o’ [-Wunused-parameter] 915 | void medium_anisotropic_destroy(medium_anisotropic o) | ~~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_destroy’: ctl-io.c:919:28: warning: unused parameter ‘o’ [-Wunused-parameter] 919 | void medium_destroy(medium o) | ~~~~~~~^ mv -f .deps/mpb-mpb.Tpo .deps/mpb-mpb.Po mv -f .deps/mpb-ctl-io.Tpo .deps/mpb-ctl-io.Po mv -f .deps/mpb-geom.Tpo .deps/mpb-geom.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpb mpb-medium.o mpb-epsilon_file.o mpb-field-smob.o mpb-fields.o mpb-material_grid.o mpb-material_grid_opt.o mpb-matrix-smob.o mpb-mpb.o mpb-main.o mpb-geom.o mpb-ctl-io.o ../src/matrixio/libmatrixio.a ../src/libmpb.la -lctl -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpb mpb-medium.o mpb-epsilon_file.o mpb-field-smob.o mpb-fields.o mpb-material_grid.o mpb-material_grid_opt.o mpb-matrix-smob.o mpb-mpb.o mpb-main.o mpb-geom.o mpb-ctl-io.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lctl -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath epsilon.c: In function 'mean_epsilon_func': epsilon.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ epsilon.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ mu.c: In function 'mean_mu_func': mu.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ mu.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' Making all in examples make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/examples' Making all in utils make[4]: Entering directory '/<>/utils' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/matrixio -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_data-mpb-data.o -MD -MP -MF .deps/mpb_data-mpb-data.Tpo -c -o mpb_data-mpb-data.o `test -f 'mpb-data.c' || echo './'`mpb-data.c mpb-data.c: In function ‘handle_file’: mpb-data.c:703:29: warning: ‘%s’ directive writing up to 389 bytes into a region of size 300 [-Wformat-overflow=] 703 | sprintf(name_re, "%s.r", dname); | ^~ In file included from /usr/include/stdio.h:888, from mpb-data.c:19: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__sprintf_chk’ output between 3 and 392 bytes into a destination of size 300 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mpb-data.c:704:29: warning: ‘%s’ directive writing up to 389 bytes into a region of size 300 [-Wformat-overflow=] 704 | sprintf(name_im, "%s.i", dname); | ^~ In file included from /usr/include/stdio.h:888, from mpb-data.c:19: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__sprintf_chk’ output between 3 and 392 bytes into a destination of size 300 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mv -f .deps/mpb_data-mpb-data.Tpo .deps/mpb_data-mpb-data.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpb-data mpb_data-mpb-data.o ../src/matrixio/libmatrixio.a ../src/libmpb.la -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpb-data mpb_data-mpb-data.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/<>/utils' make[4]: Entering directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make install prefix=/<>/debian/build-tmp/mpb/usr make[2]: Entering directory '/<>' Making install in src make[3]: Entering directory '/<>/src' make install-recursive make[4]: Entering directory '/<>/src' Making install in util make[5]: Entering directory '/<>/src/util' make install-am make[6]: Entering directory '/<>/src/util' make[7]: Entering directory '/<>/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' make[5]: Leaving directory '/<>/src/util' Making install in matrices make[5]: Entering directory '/<>/src/matrices' make[6]: Entering directory '/<>/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrices' make[5]: Leaving directory '/<>/src/matrices' Making install in matrixio make[5]: Entering directory '/<>/src/matrixio' make[6]: Entering directory '/<>/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrixio' make[5]: Leaving directory '/<>/src/matrixio' Making install in maxwell make[5]: Entering directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/maxwell' make[5]: Leaving directory '/<>/src/maxwell' make[5]: Entering directory '/<>/src' make[6]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpb.la '/<>/debian/build-tmp/mpb/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpb.lai /<>/debian/build-tmp/mpb/usr/lib/libmpb.la libtool: install: /usr/bin/install -c .libs/libmpb.a /<>/debian/build-tmp/mpb/usr/lib/libmpb.a libtool: install: chmod 644 /<>/debian/build-tmp/mpb/usr/lib/libmpb.a libtool: install: ranlib /<>/debian/build-tmp/mpb/usr/lib/libmpb.a libtool: warning: remember to run 'libtool --finish /usr/lib' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/include' /usr/bin/install -c -m 644 mpb.h '/<>/debian/build-tmp/mpb/usr/include' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h util/verbosity.h '/<>/debian/build-tmp/mpb/usr/include/mpb' make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making install in tests make[3]: Entering directory '/<>/tests' make[4]: Entering directory '/<>/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/tests' make[3]: Leaving directory '/<>/tests' Making install in mpb make[3]: Entering directory '/<>/mpb' make install-am make[4]: Entering directory '/<>/mpb' make[5]: Entering directory '/<>/mpb' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpb '/<>/debian/build-tmp/mpb/usr/bin' libtool: install: /usr/bin/install -c mpb /<>/debian/build-tmp/mpb/usr/bin/mpb /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/bin' /usr/bin/install -c mpb-split '/<>/debian/build-tmp/mpb/usr/bin' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/<>/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/<>/debian/build-tmp/mpb/usr/share/mpb' make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' make[3]: Leaving directory '/<>/mpb' Making install in examples make[3]: Entering directory '/<>/examples' make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/examples' make[3]: Leaving directory '/<>/examples' Making install in utils make[3]: Entering directory '/<>/utils' make[4]: Entering directory '/<>/utils' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpb-data '/<>/debian/build-tmp/mpb/usr/bin' libtool: install: /usr/bin/install -c mpb-data /<>/debian/build-tmp/mpb/usr/bin/mpb-data /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/<>/debian/build-tmp/mpb/usr/share/man/man1' make[4]: Leaving directory '/<>/utils' make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make clean make[2]: Entering directory '/<>' Making clean in src make[3]: Entering directory '/<>/src' Making clean in util make[4]: Entering directory '/<>/src/util' rm -rf .libs _libs test -z "libutil.la" || rm -f libutil.la rm -f ./so_locations rm -f sphere_quad rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/util' Making clean in matrices make[4]: Entering directory '/<>/src/matrices' rm -rf .libs _libs test -z "libmatrices.la" || rm -f libmatrices.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/matrices' Making clean in matrixio make[4]: Entering directory '/<>/src/matrixio' rm -rf .libs _libs test -z "libmatrixio.a" || rm -f libmatrixio.a rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/matrixio' Making clean in maxwell make[4]: Entering directory '/<>/src/maxwell' rm -rf .libs _libs test -z "libmaxwell.la" || rm -f libmaxwell.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/maxwell' make[4]: Entering directory '/<>/src' test -z "libmpb.la" || rm -f libmpb.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making clean in tests make[3]: Entering directory '/<>/tests' rm -rf .libs _libs rm -f blastest.out maxwell_test.out maxwell_test_2.out rm -f malloctest blastest eigs_test maxwell_test normal_vectors rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/tests' Making clean in mpb make[3]: Entering directory '/<>/mpb' rm -f mpb rm -rf .libs _libs rm -f ctl-io.* main.* geom.* rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/mpb' Making clean in examples make[3]: Entering directory '/<>/examples' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/<>/examples' Making clean in utils make[3]: Entering directory '/<>/utils' rm -f mpb-data rm -rf .libs _libs rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' echo "Step1: normal version end" Step1: normal version end # version with inverse symmetry #XXX dh_auto_configure -- --with-inv-symmetry --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode F77=gfortran CC=mpicc SH_JOB=/bin/bash ./configure --with-inv-symmetry --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode configure: loading cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... (cached) /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... (cached) /usr/bin/mkdir -p checking for gawk... (cached) mawk checking whether make sets $(MAKE)... (cached) yes checking whether make supports nested variables... (cached) yes checking whether make supports nested variables... (cached) yes checking build system type... (cached) x86_64-pc-linux-gnu checking host system type... (cached) x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... (cached) o checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/grep -E checking for fgrep... (cached) /usr/bin/grep -F checking for ld used by mpicc... (cached) /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... (cached) yes checking for BSD- or MS-compatible name lister (nm)... (cached) /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... (cached) func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... (cached) func_convert_file_noop checking for /usr/bin/ld option to reload object files... (cached) -r checking for objdump... (cached) objdump checking how to recognize dependent libraries... (cached) pass_all checking for dlltool... no checking how to associate runtime and link libraries... (cached) printf %s\n checking for ar... (cached) ar checking for archiver @FILE support... (cached) @ checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from mpicc object... (cached) ok checking for sysroot... no checking for a working dd... (cached) /usr/bin/dd checking how to truncate binary pipes... (cached) /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... (cached) no checking for stdio.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for strings.h... (cached) yes checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... (cached) .libs checking if mpicc supports -fno-rtti -fno-exceptions... (cached) no checking for mpicc option to produce PIC... (cached) -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... (cached) yes checking if mpicc static flag -static works... (cached) no checking if mpicc supports -c -o file.o... (cached) yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether the compiler supports GNU Fortran 77... (cached) yes checking whether gfortran accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... (cached) -fPIC checking if gfortran PIC flag -fPIC works... (cached) yes checking if gfortran static flag -static works... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... (cached) /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... (cached) mpicc checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 *********************** INVERSION SYM. *********************** checking for sqrt in -lm... (cached) yes checking how to get verbose linking output from gfortran... (cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... (cached) none checking for Fortran 77 name-mangling scheme... (cached) lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... (cached) yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... (cached) no checking for ATL_xerbla in -latlas... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for dgemm_ in -ldgemm... (cached) no checking for sgemm_ in -lmkl... (cached) no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... (cached) no checking for sgemm_ in -ldxml... (cached) no checking for sgemm_ in -lscs... (cached) no checking for sgemm_ in -lcomplib.sgimath... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... (cached) no checking for cheev_ in -llapack... (cached) yes checking for deflate in -lz... (cached) yes checking for H5Pcreate in -lhdf5... (cached) yes checking for hdf5.h... (cached) yes checking for guile... (cached) yes checking for guile-config... (cached) guile-config checking if linking to guile works... yes checking for libguile.h... (cached) yes checking for guile/gh.h... (cached) no checking for scm_make_smob_type... (cached) yes checking for scm_array_get_handle... (cached) yes checking for scm_is_array... (cached) yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... (cached) gen-ctl-io checking for ctl_get_vector3 in -lctl... (cached) yes checking for ctl.h... (cached) yes checking whether libctl version is at least 4.0.0... checking how to run the C preprocessor... (cached) mpicc -E ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... (cached) yes checking for ctlgeom.h... (cached) yes checking for nlopt.h... (cached) no checking for nlopt_minimize in -lnlopt... (cached) no checking for egrep... (cached) /usr/bin/grep -E checking for unistd.h... (cached) yes checking for getopt.h... (cached) yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... (cached) yes checking for inline... (cached) inline checking for getopt... (cached) yes checking for strncmp... (cached) yes checking whether calling BLAS zdotc works... yes checking for bash... (cached) /bin/bash checking for feenableexcept... (cached) yes checking whether feenableexcept declaration is usable... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: executing depfiles commands config.status: executing libtool commands echo "Step2: inverse version start" Step2: inverse version start dh_auto_build make -j4 make[2]: Entering directory '/<>' make all-recursive make[3]: Entering directory '/<>' Making all in src make[4]: Entering directory '/<>/src' cp -f mpbconf.h mpbi.h make all-recursive make[5]: Entering directory '/<>/src' Making all in util make[6]: Entering directory '/<>/src/util' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT sphere-quad.o -MD -MP -MF .deps/sphere-quad.Tpo -c -o sphere-quad.o sphere-quad.c mv -f .deps/sphere-quad.Tpo .deps/sphere-quad.Po /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -llapack -lblas -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../../src/util/sphere_quad) > sphere-quad.h make all-am make[7]: Entering directory '/<>/src/util' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c -o debug_malloc.lo debug_malloc.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c -o mpi_utils.lo mpi_utils.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c -o verbosity.lo verbosity.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c debug_malloc.c -o debug_malloc.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c mpi_utils.c -o mpi_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c verbosity.c -o verbosity.o mpi_utils.c: In function ‘mpi_begin_critical_section’: mpi_utils.c:202:22: warning: unused variable ‘status’ [-Wunused-variable] 202 | MPI_Status status; | ^~~~~~ mpi_utils.c: In function ‘mpi_end_critical_section’: mpi_utils.c:210:35: warning: unused parameter ‘tag’ [-Wunused-parameter] 210 | void mpi_end_critical_section(int tag) | ~~~~^~~ mpi_utils.c: In function ‘mpi_one_printf’: mpi_utils.c:139:10: warning: ignoring return value of ‘vasprintf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 139 | vasprintf(&s, template, ap); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mv -f .deps/debug_malloc.Tpo .deps/debug_malloc.Plo mv -f .deps/verbosity.Tpo .deps/verbosity.Plo mv -f .deps/mpi_utils.Tpo .deps/mpi_utils.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libutil.la debug_malloc.lo mpi_utils.lo verbosity.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libutil.a debug_malloc.o mpi_utils.o verbosity.o libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' Making all in matrices make[6]: Entering directory '/<>/src/matrices' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c -o libmatrices_la-blasglue.lo `test -f 'blasglue.c' || echo './'`blasglue.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c -o libmatrices_la-eigensolver.lo `test -f 'eigensolver.c' || echo './'`eigensolver.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c -o libmatrices_la-eigensolver_davidson.lo `test -f 'eigensolver_davidson.c' || echo './'`eigensolver_davidson.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c -o libmatrices_la-eigensolver_utils.lo `test -f 'eigensolver_utils.c' || echo './'`eigensolver_utils.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c blasglue.c -o libmatrices_la-blasglue.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c eigensolver_davidson.c -o libmatrices_la-eigensolver_davidson.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c eigensolver.c -o libmatrices_la-eigensolver.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c eigensolver_utils.c -o libmatrices_la-eigensolver_utils.o mv -f .deps/libmatrices_la-eigensolver_utils.Tpo .deps/libmatrices_la-eigensolver_utils.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c -o libmatrices_la-evectmatrix.lo `test -f 'evectmatrix.c' || echo './'`evectmatrix.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c evectmatrix.c -o libmatrices_la-evectmatrix.o mv -f .deps/libmatrices_la-blasglue.Tpo .deps/libmatrices_la-blasglue.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c -o libmatrices_la-linmin.lo `test -f 'linmin.c' || echo './'`linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c linmin.c -o libmatrices_la-linmin.o mv -f .deps/libmatrices_la-eigensolver_davidson.Tpo .deps/libmatrices_la-eigensolver_davidson.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c -o libmatrices_la-matrices.lo `test -f 'matrices.c' || echo './'`matrices.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c matrices.c -o libmatrices_la-matrices.o mv -f .deps/libmatrices_la-linmin.Tpo .deps/libmatrices_la-linmin.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c -o libmatrices_la-minpack2-linmin.lo `test -f 'minpack2-linmin.c' || echo './'`minpack2-linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c minpack2-linmin.c -o libmatrices_la-minpack2-linmin.o mv -f .deps/libmatrices_la-evectmatrix.Tpo .deps/libmatrices_la-evectmatrix.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c -o libmatrices_la-sqmatrix.lo `test -f 'sqmatrix.c' || echo './'`sqmatrix.c mv -f .deps/libmatrices_la-matrices.Tpo .deps/libmatrices_la-matrices.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c sqmatrix.c -o libmatrices_la-sqmatrix.o mv -f .deps/libmatrices_la-minpack2-linmin.Tpo .deps/libmatrices_la-minpack2-linmin.Plo mv -f .deps/libmatrices_la-sqmatrix.Tpo .deps/libmatrices_la-sqmatrix.Plo mv -f .deps/libmatrices_la-eigensolver.Tpo .deps/libmatrices_la-eigensolver.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmatrices.la libmatrices_la-blasglue.lo libmatrices_la-eigensolver.lo libmatrices_la-eigensolver_davidson.lo libmatrices_la-eigensolver_utils.lo libmatrices_la-evectmatrix.lo libmatrices_la-linmin.lo libmatrices_la-matrices.lo libmatrices_la-minpack2-linmin.lo libmatrices_la-sqmatrix.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmatrices.a libmatrices_la-blasglue.o libmatrices_la-eigensolver.o libmatrices_la-eigensolver_davidson.o libmatrices_la-eigensolver_utils.o libmatrices_la-evectmatrix.o libmatrices_la-linmin.o libmatrices_la-matrices.o libmatrices_la-minpack2-linmin.o libmatrices_la-sqmatrix.o libtool: link: ranlib .libs/libmatrices.a libtool: link: ( cd ".libs" && rm -f "libmatrices.la" && ln -s "../libmatrices.la" "libmatrices.la" ) make[6]: Leaving directory '/<>/src/matrices' Making all in matrixio make[6]: Entering directory '/<>/src/matrixio' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-evectmatrixio.o -MD -MP -MF .deps/libmatrixio_a-evectmatrixio.Tpo -c -o libmatrixio_a-evectmatrixio.o `test -f 'evectmatrixio.c' || echo './'`evectmatrixio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-fieldio.o -MD -MP -MF .deps/libmatrixio_a-fieldio.Tpo -c -o libmatrixio_a-fieldio.o `test -f 'fieldio.c' || echo './'`fieldio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-matrixio.o -MD -MP -MF .deps/libmatrixio_a-matrixio.Tpo -c -o libmatrixio_a-matrixio.o `test -f 'matrixio.c' || echo './'`matrixio.c matrixio.c: In function ‘matrixio_create_sub’: matrixio.c:469:24: warning: statement with no effect [-Wunused-value] 469 | IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); | ^ matrixio.c:58:32: note: in definition of macro ‘IF_EXCLUSIVE’ 58 | # define IF_EXCLUSIVE(yes,no) yes | ^~~ matrixio.c:472:24: warning: statement with no effect [-Wunused-value] 472 | IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); | ^ matrixio.c:58:32: note: in definition of macro ‘IF_EXCLUSIVE’ 58 | # define IF_EXCLUSIVE(yes,no) yes | ^~~ In file included from matrixio.c:29: matrixio.c: In function ‘matrixio_open_dataset’: matrixio.c:516:30: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 516 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ matrixio.c: In function ‘matrixio_create_dataset’: matrixio.c:552:24: warning: statement with no effect [-Wunused-value] 552 | IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); | ^ matrixio.c:58:32: note: in definition of macro ‘IF_EXCLUSIVE’ 58 | # define IF_EXCLUSIVE(yes,no) yes | ^~~ In file included from matrixio.c:29: matrixio.c: In function ‘matrixio_read_real_data’: matrixio.c:837:35: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 837 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fieldio.c:41:46: warning: argument 8 of type ‘const real *’ {aka ‘const double *’} declared as a pointer [-Warray-parameter=] 41 | const real *kvector, | ~~~~~~~~~~~~^~~~~~~ In file included from fieldio.c:28: matrixio.h:95:52: note: previously declared as an array ‘const real[3]’ {aka ‘const double[3]’} 95 | const real kvector[3], | ~~~~~~~~~~~^~~~~~~~~~ mv -f .deps/libmatrixio_a-evectmatrixio.Tpo .deps/libmatrixio_a-evectmatrixio.Po mv -f .deps/libmatrixio_a-fieldio.Tpo .deps/libmatrixio_a-fieldio.Po mv -f .deps/libmatrixio_a-matrixio.Tpo .deps/libmatrixio_a-matrixio.Po rm -f libmatrixio.a ar cru libmatrixio.a libmatrixio_a-evectmatrixio.o libmatrixio_a-fieldio.o libmatrixio_a-matrixio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmatrixio.a make[6]: Leaving directory '/<>/src/matrixio' Making all in maxwell make[6]: Entering directory '/<>/src/maxwell' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c -o libmaxwell_la-maxwell.lo `test -f 'maxwell.c' || echo './'`maxwell.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c -o libmaxwell_la-maxwell_constraints.lo `test -f 'maxwell_constraints.c' || echo './'`maxwell_constraints.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c -o libmaxwell_la-maxwell_eps.lo `test -f 'maxwell_eps.c' || echo './'`maxwell_eps.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c -o libmaxwell_la-maxwell_op.lo `test -f 'maxwell_op.c' || echo './'`maxwell_op.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c maxwell_eps.c -o libmaxwell_la-maxwell_eps.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c maxwell.c -o libmaxwell_la-maxwell.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c maxwell_constraints.c -o libmaxwell_la-maxwell_constraints.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c maxwell_op.c -o libmaxwell_la-maxwell_op.o maxwell_op.c: In function ‘project_c2t’: maxwell_op.c:51:54: warning: unused variable ‘az_i’ [-Wunused-variable] 51 | real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); | ^~~~ maxwell_op.c:51:32: warning: unused variable ‘ay_i’ [-Wunused-variable] 51 | real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); | ^~~~ maxwell_op.c:51:10: warning: unused variable ‘ax_i’ [-Wunused-variable] 51 | real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); | ^~~~ maxwell_op.c: In function ‘maxwell_compute_fft’: maxwell_op.c:187:21: warning: variable ‘np’ set but not used [-Wunused-but-set-variable] 187 | ptrdiff_t np[3]; | ^~ In file included from maxwell_eps.c:29: maxwell_eps.c: In function ‘set_maxwell_dielectric’: xyz_loop.h:39:15: warning: unused variable ‘n1’ [-Wunused-variable] 39 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1_, i2_, i1, i2, i3; \ | ^~ maxwell_eps.c:421:6: note: in expansion of macro ‘LOOP_XYZ’ 421 | LOOP_XYZ(md) { | ^~~~~~~~ maxwell_eps.c:404:27: warning: unused variable ‘rank’ [-Wunused-variable] 404 | int n_other, n_last, rank; | ^~~~ maxwell_eps.c:404:19: warning: unused variable ‘n_last’ [-Wunused-variable] 404 | int n_other, n_last, rank; | ^~~~~~ maxwell_eps.c:404:10: warning: unused variable ‘n_other’ [-Wunused-variable] 404 | int n_other, n_last, rank; | ^~~~~~~ maxwell_eps.c:395:16: warning: unused variable ‘k’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:13: warning: unused variable ‘j’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:10: warning: unused variable ‘i’ [-Wunused-variable] 395 | int i, j, k; | ^ At top level: maxwell_eps.c:181:12: warning: ‘sym_matrix_eq’ defined but not used [-Wunused-function] 181 | static int sym_matrix_eq(symmetric_matrix V1, symmetric_matrix V2, double tol) | ^~~~~~~~~~~~~ mv -f .deps/libmaxwell_la-maxwell.Tpo .deps/libmaxwell_la-maxwell.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c -o libmaxwell_la-maxwell_pre.lo `test -f 'maxwell_pre.c' || echo './'`maxwell_pre.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c maxwell_pre.c -o libmaxwell_la-maxwell_pre.o mv -f .deps/libmaxwell_la-maxwell_constraints.Tpo .deps/libmaxwell_la-maxwell_constraints.Plo mv -f .deps/libmaxwell_la-maxwell_eps.Tpo .deps/libmaxwell_la-maxwell_eps.Plo mv -f .deps/libmaxwell_la-maxwell_pre.Tpo .deps/libmaxwell_la-maxwell_pre.Plo mv -f .deps/libmaxwell_la-maxwell_op.Tpo .deps/libmaxwell_la-maxwell_op.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmaxwell.la libmaxwell_la-maxwell.lo libmaxwell_la-maxwell_constraints.lo libmaxwell_la-maxwell_eps.lo libmaxwell_la-maxwell_op.lo libmaxwell_la-maxwell_pre.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmaxwell.a libmaxwell_la-maxwell.o libmaxwell_la-maxwell_constraints.o libmaxwell_la-maxwell_eps.o libmaxwell_la-maxwell_op.o libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmaxwell.a libtool: link: ( cd ".libs" && rm -f "libmaxwell.la" && ln -s "../libmaxwell.la" "libmaxwell.la" ) make[6]: Leaving directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -no-undefined -version-info 5:1:4 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmpbi.la -rpath /usr/lib util/libutil.la matrices/libmatrices.la maxwell/libmaxwell.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: (cd .libs/libmpbi.lax/libutil.a && ar x "/<>/src/util/.libs/libutil.a") libtool: link: (cd .libs/libmpbi.lax/libmatrices.a && ar x "/<>/src/matrices/.libs/libmatrices.a") libtool: link: (cd .libs/libmpbi.lax/libmaxwell.a && ar x "/<>/src/maxwell/.libs/libmaxwell.a") libtool: link: ar cr .libs/libmpbi.a .libs/libmpbi.lax/libutil.a/debug_malloc.o .libs/libmpbi.lax/libutil.a/mpi_utils.o .libs/libmpbi.lax/libutil.a/verbosity.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-blasglue.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-eigensolver.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-eigensolver_davidson.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-eigensolver_utils.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-evectmatrix.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-linmin.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-matrices.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-minpack2-linmin.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-sqmatrix.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell_constraints.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell_eps.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell_op.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmpbi.a libtool: link: rm -fr .libs/libmpbi.lax libtool: link: ( cd ".libs" && rm -f "libmpbi.la" && ln -s "../libmpbi.la" "libmpbi.la" ) make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' Making all in tests make[4]: Entering directory '/<>/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT malloctest.o -MD -MP -MF .deps/malloctest.Tpo -c -o malloctest.o malloctest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT blastest.o -MD -MP -MF .deps/blastest.Tpo -c -o blastest.o blastest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT eigs_test.o -MD -MP -MF .deps/eigs_test.Tpo -c -o eigs_test.o eigs_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT maxwell_test.o -MD -MP -MF .deps/maxwell_test.Tpo -c -o maxwell_test.o maxwell_test.c eigs_test.c: In function ‘Aop’: eigs_test.c:293:51: warning: unused parameter ‘data’ [-Wunused-parameter] 293 | void Aop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:294:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:294:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Bop’: eigs_test.c:303:51: warning: unused parameter ‘data’ [-Wunused-parameter] 303 | void Bop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:304:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:304:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Ainvop’: eigs_test.c:313:54: warning: unused parameter ‘data’ [-Wunused-parameter] 313 | void Ainvop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:314:25: warning: unused parameter ‘Y’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:314:34: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c:314:54: warning: unused parameter ‘YtY’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~^~~ eigs_test.c: In function ‘Cop_old’: eigs_test.c:324:55: warning: unused parameter ‘data’ [-Wunused-parameter] 324 | void Cop_old(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:325:22: warning: unused parameter ‘Y’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:325:31: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c: In function ‘Cop’: eigs_test.c:349:51: warning: unused parameter ‘data’ [-Wunused-parameter] 349 | void Cop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:350:23: warning: unused parameter ‘Y’ [-Wunused-parameter] 350 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ mv -f .deps/malloctest.Tpo .deps/malloctest.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT normal_vectors-normal_vectors.o -MD -MP -MF .deps/normal_vectors-normal_vectors.Tpo -c -o normal_vectors-normal_vectors.o `test -f 'normal_vectors.c' || echo './'`normal_vectors.c mv -f .deps/blastest.Tpo .deps/blastest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/normal_vectors-normal_vectors.Tpo .deps/normal_vectors-normal_vectors.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/maxwell_test.Tpo .deps/maxwell_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/eigs_test.Tpo .deps/eigs_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/<>/tests' Making all in mpb make[4]: Entering directory '/<>/mpb' cp -f /usr/share/libctl/base/main.c main.c cp -f /usr/share/libctl/utils/geom.c geom.c gen-ctl-io --header -o ctl-io.h mpb.scm /usr/share/libctl gen-ctl-io --code -o ctl-io.c mpb.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" make all-am make[5]: Entering directory '/<>/mpb' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-medium.o -MD -MP -MF .deps/mpbi-medium.Tpo -c -o mpbi-medium.o `test -f 'medium.c' || echo './'`medium.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-epsilon_file.o -MD -MP -MF .deps/mpbi-epsilon_file.Tpo -c -o mpbi-epsilon_file.o `test -f 'epsilon_file.c' || echo './'`epsilon_file.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-field-smob.o -MD -MP -MF .deps/mpbi-field-smob.Tpo -c -o mpbi-field-smob.o `test -f 'field-smob.c' || echo './'`field-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-fields.o -MD -MP -MF .deps/mpbi-fields.Tpo -c -o mpbi-fields.o `test -f 'fields.c' || echo './'`fields.c field-smob.c: In function ‘integrate_fieldL’: field-smob.c:407:16: warning: unused variable ‘k’ [-Wunused-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ In file included from medium.c:75: epsilon.c: In function ‘get_epsilon’: epsilon.c:434:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ epsilon.c:434:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ epsilon.c:434:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ In file included from medium.c:76: mu.c: In function ‘get_mu’: mu.c:434:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ mu.c:434:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ mu.c:434:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c: In function ‘compute_field_energy_internal’: fields.c:229:50: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ fields.c:229:46: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:229:42: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c: In function ‘fix_field_phase’: fields.c:446:13: warning: unused variable ‘theta’ [-Wunused-variable] 446 | double theta; | ^~~~~ fields.c:444:31: warning: unused variable ‘sq_sum’ [-Wunused-variable] 444 | real sq_sum2[2] = {0,0}, sq_sum[2], maxabs = 0.0; | ^~~~~~ fields.c:444:11: warning: unused variable ‘sq_sum2’ [-Wunused-variable] 444 | real sq_sum2[2] = {0,0}, sq_sum[2], maxabs = 0.0; | ^~~~~~~ fields.c: In function ‘compute_energy_in_dielectric’: fields.c:873:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ fields.c:873:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:873:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c: In function ‘compute_energy_in_object_list’: fields.c:1322:6: warning: ‘geom_fix_objects0’ is deprecated [-Wdeprecated-declarations] 1322 | geom_fix_objects0(objects); | ^~~~~~~~~~~~~~~~~ In file included from fields.c:33: /usr/include/ctlgeom.h:65:13: note: declared here 65 | extern void geom_fix_objects0(GEOMETRIC_OBJECT_LIST geometry) CTLGEOM_DEPRECATED; | ^~~~~~~~~~~~~~~~~ In file included from fields.c:30: ../src/maxwell/xyz_loop.h:39:15: warning: unused variable ‘n1’ [-Wunused-variable] 39 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1_, i2_, i1, i2, i3; \ | ^~ fields.c:1337:6: note: in expansion of macro ‘LOOP_XYZ’ 1337 | LOOP_XYZ(mdata) { | ^~~~~~~~ fields.c:1309:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1309:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1309:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1309:16: warning: unused variable ‘k’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1309:10: warning: unused variable ‘i’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_field_integral’: fields.c:1377:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1377:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1377:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1377:16: warning: unused variable ‘k’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:10: warning: unused variable ‘i’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ mv -f .deps/mpbi-epsilon_file.Tpo .deps/mpbi-epsilon_file.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-material_grid.o -MD -MP -MF .deps/mpbi-material_grid.Tpo -c -o mpbi-material_grid.o `test -f 'material_grid.c' || echo './'`material_grid.c mu.c: In function ‘mean_mu_func’: mu.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ mu.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ material_grid.c: In function ‘material_grids_addgradient’: material_grid.c:390:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:390:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:390:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ material_grid.c:390:16: warning: unused variable ‘k’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: In function ‘print_material_grids_deps_du_numeric’: material_grid.c:634:14: warning: unused variable ‘foo’ [-Wunused-variable] 634 | double *foo; | ^~~ In file included from material_grid.c:25: material_grid.c: In function ‘synchronize_material_grid’: ../src/util/mpiglue.h:58:40: warning: statement with no effect [-Wunused-value] 58 | #define MPI_Bcast(b, n, t, root, comm) 0 | ^ material_grid.c:693:6: note: in expansion of macro ‘MPI_Bcast’ 693 | MPI_Bcast(grid, n, MPI_DOUBLE, 0, mpb_comm); | ^~~~~~~~~ material_grid.c:691:10: warning: unused variable ‘n’ [-Wunused-variable] 691 | int n = ((int) g->size.x) * ((int) g->size.y) * ((int) g->size.z); | ^ material_grid.c:690:14: warning: variable ‘grid’ set but not used [-Wunused-but-set-variable] 690 | double *grid; | ^~~~ material_grid.c: In function ‘match_eps_func’: material_grid.c:816:16: warning: unused variable ‘k’ [-Wunused-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ At top level: material_grid.c:807:15: warning: ‘match_eps_func’ defined but not used [-Wunused-function] 807 | static double match_eps_func(int n, const double *u, double *grad, void *data) | ^~~~~~~~~~~~~~ In file included from medium.c:75: epsilon.c: In function ‘mean_epsilon_func’: epsilon.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ epsilon.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ mv -f .deps/mpbi-field-smob.Tpo .deps/mpbi-field-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-material_grid_opt.o -MD -MP -MF .deps/mpbi-material_grid_opt.Tpo -c -o mpbi-material_grid_opt.o `test -f 'material_grid_opt.c' || echo './'`material_grid_opt.c material_grid_opt.c: In function ‘material_grids_min_tetm_gap’: material_grid_opt.c:90:43: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 90 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:91:44: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:91:60: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ material_grid_opt.c: In function ‘material_grids_maxmin_gap’: material_grid_opt.c:258:48: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 258 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:259:49: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:259:65: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ material_grid.c: In function ‘material_grids_addgradient’: material_grid.c:390:13: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ mv -f .deps/mpbi-material_grid_opt.Tpo .deps/mpbi-material_grid_opt.Po mv -f .deps/mpbi-medium.Tpo .deps/mpbi-medium.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-matrix-smob.o -MD -MP -MF .deps/mpbi-matrix-smob.Tpo -c -o mpbi-matrix-smob.o `test -f 'matrix-smob.c' || echo './'`matrix-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-mpb.o -MD -MP -MF .deps/mpbi-mpb.Tpo -c -o mpbi-mpb.o `test -f 'mpb.c' || echo './'`mpb.c fields.c: In function ‘compute_energy_in_object_list’: fields.c:1309:13: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_field_integral’: fields.c:1377:13: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ In file included from mpb.c:35: mpb.c: In function ‘ctl_start_hook’: ../src/util/mpiglue.h:42:29: warning: statement with no effect [-Wunused-value] 42 | #define MPI_Init(argc,argv) 0 | ^ mpb.c:99:6: note: in expansion of macro ‘MPI_Init’ 99 | MPI_Init(argc, argv); | ^~~~~~~~ mpb.c:97:26: warning: unused parameter ‘argc’ [-Wunused-parameter] 97 | void ctl_start_hook(int *argc, char ***argv) | ~~~~~^~~~ mpb.c:97:40: warning: unused parameter ‘argv’ [-Wunused-parameter] 97 | void ctl_start_hook(int *argc, char ***argv) | ~~~~~~~~^~~~ In file included from mpb.c:35: mpb.c: In function ‘ctl_stop_hook’: ../src/util/mpiglue.h:43:24: warning: statement with no effect [-Wunused-value] 43 | #define MPI_Finalize() 0 | ^ mpb.c:143:6: note: in expansion of macro ‘MPI_Finalize’ 143 | MPI_Finalize(); | ^~~~~~~~~~~~ mv -f .deps/mpbi-fields.Tpo .deps/mpbi-fields.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-main.o -MD -MP -MF .deps/mpbi-main.Tpo -c -o mpbi-main.o `test -f 'main.c' || echo './'`main.c mv -f .deps/mpbi-material_grid.Tpo .deps/mpbi-material_grid.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-geom.o -MD -MP -MF .deps/mpbi-geom.Tpo -c -o mpbi-geom.o `test -f 'geom.c' || echo './'`geom.c In file included from ctl-io.h:7, from main.c:37: main.c: In function ‘main_entry’: main.c:194:31: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 194 | gh_new_procedure("subplex", (SCM(*)(void))subplex_scm, 7, 0, 0); | ^ main.c:202:44: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 202 | gh_new_procedure("adaptive-integration", (SCM(*)(void))adaptive_integration_scm, 6, 0, 0); | ^ main.c:205:45: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^ mv -f .deps/mpbi-matrix-smob.Tpo .deps/mpbi-matrix-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-ctl-io.o -MD -MP -MF .deps/mpbi-ctl-io.Tpo -c -o mpbi-ctl-io.o `test -f 'ctl-io.c' || echo './'`ctl-io.c geom.c: In function ‘overlap_integrand’: geom.c:1156:10: warning: unused variable ‘s’ [-Wunused-variable] 1156 | double s[2]; | ^ geom.c: In function ‘point_in_or_on_prism’: geom.c:2110:10: warning: unused variable ‘height’ [-Wunused-variable] 2110 | double height = prsm->height; | ^~~~~~ geom.c: In function ‘dcmp’: geom.c:2137:17: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c:2137:40: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ mv -f .deps/mpbi-main.Tpo .deps/mpbi-main.Po geom.c: In function ‘normal_to_prism’: geom.c:2357:11: warning: unused variable ‘axisp’ [-Wunused-variable] 2357 | vector3 axisp = vector3_scale(height, zhatp); | ^~~~~ sed "s%\./mpb%"/usr/bin/"mpbi%g" \ mpb-split-preinstall > mpbi-split geom.c: In function ‘triangle_normal’: geom.c:2548:10: warning: unused variable ‘nvnorm’ [-Wunused-variable] 2548 | double nvnorm = vector3_norm(nv); | ^~~~~~ chmod u+x mpbi-split ctl-io.c: In function ‘block_equal’: ctl-io.c:639:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 639 | else ; | ^ ctl-io.c: In function ‘cylinder_equal’: ctl-io.c:679:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 679 | else ; | ^ ctl-io.c: In function ‘geometric_object_equal’: ctl-io.c:716:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 716 | else ; | ^ ctl-io.c: In function ‘material_type_equal’: ctl-io.c:776:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 776 | else ; | ^ ctl-io.c: In function ‘lattice_destroy’: ctl-io.c:782:30: warning: unused parameter ‘o’ [-Wunused-parameter] 782 | void lattice_destroy(lattice o) | ~~~~~~~~^ ctl-io.c: In function ‘ellipsoid_destroy’: ctl-io.c:786:34: warning: unused parameter ‘o’ [-Wunused-parameter] 786 | void ellipsoid_destroy(ellipsoid o) | ~~~~~~~~~~^ ctl-io.c: In function ‘sphere_destroy’: ctl-io.c:845:28: warning: unused parameter ‘o’ [-Wunused-parameter] 845 | void sphere_destroy(sphere o) | ~~~~~~~^ ctl-io.c: In function ‘wedge_destroy’: ctl-io.c:849:26: warning: unused parameter ‘o’ [-Wunused-parameter] 849 | void wedge_destroy(wedge o) | ~~~~~~^ ctl-io.c: In function ‘cone_destroy’: ctl-io.c:853:24: warning: unused parameter ‘o’ [-Wunused-parameter] 853 | void cone_destroy(cone o) | ~~~~~^ ctl-io.c: In function ‘material_grid_destroy’: ctl-io.c:907:42: warning: unused parameter ‘o’ [-Wunused-parameter] 907 | void material_grid_destroy(material_grid o) | ~~~~~~~~~~~~~~^ ctl-io.c: In function ‘material_function_destroy’: ctl-io.c:911:50: warning: unused parameter ‘o’ [-Wunused-parameter] 911 | void material_function_destroy(material_function o) | ~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_anisotropic_destroy’: ctl-io.c:915:52: warning: unused parameter ‘o’ [-Wunused-parameter] 915 | void medium_anisotropic_destroy(medium_anisotropic o) | ~~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_destroy’: ctl-io.c:919:28: warning: unused parameter ‘o’ [-Wunused-parameter] 919 | void medium_destroy(medium o) | ~~~~~~~^ mv -f .deps/mpbi-mpb.Tpo .deps/mpbi-mpb.Po mv -f .deps/mpbi-ctl-io.Tpo .deps/mpbi-ctl-io.Po mv -f .deps/mpbi-geom.Tpo .deps/mpbi-geom.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpbi mpbi-medium.o mpbi-epsilon_file.o mpbi-field-smob.o mpbi-fields.o mpbi-material_grid.o mpbi-material_grid_opt.o mpbi-matrix-smob.o mpbi-mpb.o mpbi-main.o mpbi-geom.o mpbi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/libmpbi.la -lctl -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpbi mpbi-medium.o mpbi-epsilon_file.o mpbi-field-smob.o mpbi-fields.o mpbi-material_grid.o mpbi-material_grid_opt.o mpbi-matrix-smob.o mpbi-mpb.o mpbi-main.o mpbi-geom.o mpbi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lctl -lguile-3.0 -lgc -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath epsilon.c: In function 'mean_epsilon_func': epsilon.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ epsilon.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ mu.c: In function 'mean_mu_func': mu.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ mu.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ fields.c: In function 'compute_field_integral': fields.c:1377:13: warning: 'j' may be used uninitialized [-Wmaybe-uninitialized] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: In function 'material_grids_addgradient': material_grid.c:390:13: warning: 'j' may be used uninitialized [-Wmaybe-uninitialized] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ ctl-io.c: In function 'compute_energy_in_object_list_aux': fields.c:1309:13: warning: 'j' may be used uninitialized [-Wmaybe-uninitialized] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' Making all in examples make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/examples' Making all in utils make[4]: Entering directory '/<>/utils' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/matrixio -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_data-mpb-data.o -MD -MP -MF .deps/mpbi_data-mpb-data.Tpo -c -o mpbi_data-mpb-data.o `test -f 'mpb-data.c' || echo './'`mpb-data.c mpb-data.c: In function ‘handle_file’: mpb-data.c:703:29: warning: ‘%s’ directive writing up to 389 bytes into a region of size 300 [-Wformat-overflow=] 703 | sprintf(name_re, "%s.r", dname); | ^~ In file included from /usr/include/stdio.h:888, from mpb-data.c:19: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__sprintf_chk’ output between 3 and 392 bytes into a destination of size 300 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mpb-data.c:704:29: warning: ‘%s’ directive writing up to 389 bytes into a region of size 300 [-Wformat-overflow=] 704 | sprintf(name_im, "%s.i", dname); | ^~ In file included from /usr/include/stdio.h:888, from mpb-data.c:19: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:10: note: ‘__sprintf_chk’ output between 3 and 392 bytes into a destination of size 300 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mv -f .deps/mpbi_data-mpb-data.Tpo .deps/mpbi_data-mpb-data.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpbi-data mpbi_data-mpb-data.o ../src/matrixio/libmatrixio.a ../src/libmpbi.la -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpbi-data mpbi_data-mpb-data.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/<>/utils' make[4]: Entering directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make install prefix=/<>/debian/build-tmp/mpb/usr make[2]: Entering directory '/<>' Making install in src make[3]: Entering directory '/<>/src' make install-recursive make[4]: Entering directory '/<>/src' Making install in util make[5]: Entering directory '/<>/src/util' make install-am make[6]: Entering directory '/<>/src/util' make[7]: Entering directory '/<>/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' make[5]: Leaving directory '/<>/src/util' Making install in matrices make[5]: Entering directory '/<>/src/matrices' make[6]: Entering directory '/<>/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrices' make[5]: Leaving directory '/<>/src/matrices' Making install in matrixio make[5]: Entering directory '/<>/src/matrixio' make[6]: Entering directory '/<>/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrixio' make[5]: Leaving directory '/<>/src/matrixio' Making install in maxwell make[5]: Entering directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/maxwell' make[5]: Leaving directory '/<>/src/maxwell' make[5]: Entering directory '/<>/src' make[6]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpbi.la '/<>/debian/build-tmp/mpb/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpbi.lai /<>/debian/build-tmp/mpb/usr/lib/libmpbi.la libtool: install: /usr/bin/install -c .libs/libmpbi.a /<>/debian/build-tmp/mpb/usr/lib/libmpbi.a libtool: install: chmod 644 /<>/debian/build-tmp/mpb/usr/lib/libmpbi.a libtool: install: ranlib /<>/debian/build-tmp/mpb/usr/lib/libmpbi.a libtool: warning: remember to run 'libtool --finish /usr/lib' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/include' /usr/bin/install -c -m 644 mpbi.h '/<>/debian/build-tmp/mpb/usr/include' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h util/verbosity.h '/<>/debian/build-tmp/mpb/usr/include/mpb' make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making install in tests make[3]: Entering directory '/<>/tests' make[4]: Entering directory '/<>/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/tests' make[3]: Leaving directory '/<>/tests' Making install in mpb make[3]: Entering directory '/<>/mpb' make install-am make[4]: Entering directory '/<>/mpb' make[5]: Entering directory '/<>/mpb' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpbi '/<>/debian/build-tmp/mpb/usr/bin' libtool: install: /usr/bin/install -c mpbi /<>/debian/build-tmp/mpb/usr/bin/mpbi /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/bin' /usr/bin/install -c mpbi-split '/<>/debian/build-tmp/mpb/usr/bin' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/<>/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/<>/debian/build-tmp/mpb/usr/share/mpb' make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' make[3]: Leaving directory '/<>/mpb' Making install in examples make[3]: Entering directory '/<>/examples' make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/examples' make[3]: Leaving directory '/<>/examples' Making install in utils make[3]: Entering directory '/<>/utils' make[4]: Entering directory '/<>/utils' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpbi-data '/<>/debian/build-tmp/mpb/usr/bin' libtool: install: /usr/bin/install -c mpbi-data /<>/debian/build-tmp/mpb/usr/bin/mpbi-data /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/<>/debian/build-tmp/mpb/usr/share/man/man1' make[4]: Leaving directory '/<>/utils' make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make clean make[2]: Entering directory '/<>' Making clean in src make[3]: Entering directory '/<>/src' Making clean in util make[4]: Entering directory '/<>/src/util' rm -rf .libs _libs test -z "libutil.la" || rm -f libutil.la rm -f ./so_locations rm -f sphere_quad rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/util' Making clean in matrices make[4]: Entering directory '/<>/src/matrices' rm -rf .libs _libs test -z "libmatrices.la" || rm -f libmatrices.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/matrices' Making clean in matrixio make[4]: Entering directory '/<>/src/matrixio' rm -rf .libs _libs test -z "libmatrixio.a" || rm -f libmatrixio.a rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/matrixio' Making clean in maxwell make[4]: Entering directory '/<>/src/maxwell' rm -rf .libs _libs test -z "libmaxwell.la" || rm -f libmaxwell.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/maxwell' make[4]: Entering directory '/<>/src' test -z "libmpbi.la" || rm -f libmpbi.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making clean in tests make[3]: Entering directory '/<>/tests' rm -rf .libs _libs rm -f blastest.out maxwell_test.out maxwell_test_2.out rm -f malloctest blastest eigs_test maxwell_test normal_vectors rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/tests' Making clean in mpb make[3]: Entering directory '/<>/mpb' rm -f mpbi rm -rf .libs _libs rm -f ctl-io.* main.* geom.* rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/mpb' Making clean in examples make[3]: Entering directory '/<>/examples' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/<>/examples' Making clean in utils make[3]: Entering directory '/<>/utils' rm -f mpbi-data rm -rf .libs _libs rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' echo "Step2: inverse version end" Step2: inverse version end # normal version with mpi echo "Step3: mpi version start" Step3: mpi version start #XXX dh_auto_configure -- --with-mpi --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode F77=gfortran CC=mpicc SH_JOB=/bin/bash ./configure --with-mpi --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode configure: loading cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... (cached) /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... (cached) /usr/bin/mkdir -p checking for gawk... (cached) mawk checking whether make sets $(MAKE)... (cached) yes checking whether make supports nested variables... (cached) yes checking whether make supports nested variables... (cached) yes checking build system type... (cached) x86_64-pc-linux-gnu checking host system type... (cached) x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... (cached) o checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/grep -E checking for fgrep... (cached) /usr/bin/grep -F checking for ld used by mpicc... (cached) /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... (cached) yes checking for BSD- or MS-compatible name lister (nm)... (cached) /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... (cached) func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... (cached) func_convert_file_noop checking for /usr/bin/ld option to reload object files... (cached) -r checking for objdump... (cached) objdump checking how to recognize dependent libraries... (cached) pass_all checking for dlltool... no checking how to associate runtime and link libraries... (cached) printf %s\n checking for ar... (cached) ar checking for archiver @FILE support... (cached) @ checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from mpicc object... (cached) ok checking for sysroot... no checking for a working dd... (cached) /usr/bin/dd checking how to truncate binary pipes... (cached) /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... (cached) no checking for stdio.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for strings.h... (cached) yes checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... (cached) .libs checking if mpicc supports -fno-rtti -fno-exceptions... (cached) no checking for mpicc option to produce PIC... (cached) -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... (cached) yes checking if mpicc static flag -static works... (cached) no checking if mpicc supports -c -o file.o... (cached) yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether the compiler supports GNU Fortran 77... (cached) yes checking whether gfortran accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... (cached) -fPIC checking if gfortran PIC flag -fPIC works... (cached) yes checking if gfortran static flag -static works... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... (cached) /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... (cached) mpicc checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for sqrt in -lm... (cached) yes checking how to get verbose linking output from gfortran... (cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... (cached) none checking for Fortran 77 name-mangling scheme... (cached) lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... (cached) yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... (cached) no checking for ATL_xerbla in -latlas... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for dgemm_ in -ldgemm... (cached) no checking for sgemm_ in -lmkl... (cached) no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... (cached) no checking for sgemm_ in -ldxml... (cached) no checking for sgemm_ in -lscs... (cached) no checking for sgemm_ in -lcomplib.sgimath... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... (cached) no checking for cheev_ in -llapack... (cached) yes checking for mpicc... mpicc checking for MPI_Init... yes checking for mpi.h... yes checking for fftw_mpi_execute_dft in -lfftw3_mpi... yes checking for mpirun... mpirun checking for deflate in -lz... (cached) yes checking for H5Pcreate in -lhdf5... (cached) yes checking for hdf5.h... (cached) yes checking for H5Pset_mpi... no checking for H5Pset_fapl_mpio... yes checking for guile... (cached) yes checking for guile-config... (cached) guile-config checking if linking to guile works... yes checking for libguile.h... (cached) yes checking for guile/gh.h... (cached) no checking for scm_make_smob_type... (cached) yes checking for scm_array_get_handle... (cached) yes checking for scm_is_array... (cached) yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... (cached) gen-ctl-io checking for ctl_get_vector3 in -lctl... (cached) yes checking for ctl.h... (cached) yes checking whether libctl version is at least 4.0.0... checking how to run the C preprocessor... (cached) mpicc -E ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... (cached) yes checking for ctlgeom.h... (cached) yes checking for nlopt.h... (cached) no checking for nlopt_minimize in -lnlopt... (cached) no checking for egrep... (cached) /usr/bin/grep -E checking for unistd.h... (cached) yes checking for getopt.h... (cached) yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... (cached) yes checking for inline... (cached) inline checking for getopt... (cached) yes checking for strncmp... (cached) yes checking whether calling BLAS zdotc works... yes checking for bash... (cached) /bin/bash checking for feenableexcept... (cached) yes checking whether feenableexcept declaration is usable... yes configure: updating cache ../config.cache checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build make -j4 make[2]: Entering directory '/<>' make all-recursive make[3]: Entering directory '/<>' Making all in src make[4]: Entering directory '/<>/src' cp -f mpbconf.h mpb_mpi.h make all-recursive make[5]: Entering directory '/<>/src' Making all in util make[6]: Entering directory '/<>/src/util' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT sphere-quad.o -MD -MP -MF .deps/sphere-quad.Tpo -c -o sphere-quad.o sphere-quad.c mv -f .deps/sphere-quad.Tpo .deps/sphere-quad.Po /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../../src/util/sphere_quad) > sphere-quad.h make all-am make[7]: Entering directory '/<>/src/util' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c -o debug_malloc.lo debug_malloc.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c -o mpi_utils.lo mpi_utils.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c -o verbosity.lo verbosity.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c debug_malloc.c -o debug_malloc.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c mpi_utils.c -o mpi_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c verbosity.c -o verbosity.o mv -f .deps/verbosity.Tpo .deps/verbosity.Plo mpi_utils.c: In function ‘mpi_one_printf’: mpi_utils.c:139:10: warning: ignoring return value of ‘vasprintf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 139 | vasprintf(&s, template, ap); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mv -f .deps/debug_malloc.Tpo .deps/debug_malloc.Plo mv -f .deps/mpi_utils.Tpo .deps/mpi_utils.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libutil.la debug_malloc.lo mpi_utils.lo verbosity.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libutil.a debug_malloc.o mpi_utils.o verbosity.o libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' Making all in matrices make[6]: Entering directory '/<>/src/matrices' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c -o libmatrices_la-blasglue.lo `test -f 'blasglue.c' || echo './'`blasglue.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c -o libmatrices_la-eigensolver.lo `test -f 'eigensolver.c' || echo './'`eigensolver.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c -o libmatrices_la-eigensolver_davidson.lo `test -f 'eigensolver_davidson.c' || echo './'`eigensolver_davidson.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c -o libmatrices_la-eigensolver_utils.lo `test -f 'eigensolver_utils.c' || echo './'`eigensolver_utils.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c blasglue.c -o libmatrices_la-blasglue.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c eigensolver_davidson.c -o libmatrices_la-eigensolver_davidson.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c eigensolver_utils.c -o libmatrices_la-eigensolver_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c eigensolver.c -o libmatrices_la-eigensolver.o mv -f .deps/libmatrices_la-eigensolver_utils.Tpo .deps/libmatrices_la-eigensolver_utils.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c -o libmatrices_la-evectmatrix.lo `test -f 'evectmatrix.c' || echo './'`evectmatrix.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c evectmatrix.c -o libmatrices_la-evectmatrix.o mv -f .deps/libmatrices_la-blasglue.Tpo .deps/libmatrices_la-blasglue.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c -o libmatrices_la-linmin.lo `test -f 'linmin.c' || echo './'`linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c linmin.c -o libmatrices_la-linmin.o mv -f .deps/libmatrices_la-eigensolver_davidson.Tpo .deps/libmatrices_la-eigensolver_davidson.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c -o libmatrices_la-matrices.lo `test -f 'matrices.c' || echo './'`matrices.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c matrices.c -o libmatrices_la-matrices.o mv -f .deps/libmatrices_la-linmin.Tpo .deps/libmatrices_la-linmin.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c -o libmatrices_la-minpack2-linmin.lo `test -f 'minpack2-linmin.c' || echo './'`minpack2-linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c minpack2-linmin.c -o libmatrices_la-minpack2-linmin.o mv -f .deps/libmatrices_la-evectmatrix.Tpo .deps/libmatrices_la-evectmatrix.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c -o libmatrices_la-sqmatrix.lo `test -f 'sqmatrix.c' || echo './'`sqmatrix.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c sqmatrix.c -o libmatrices_la-sqmatrix.o mv -f .deps/libmatrices_la-matrices.Tpo .deps/libmatrices_la-matrices.Plo mv -f .deps/libmatrices_la-minpack2-linmin.Tpo .deps/libmatrices_la-minpack2-linmin.Plo mv -f .deps/libmatrices_la-sqmatrix.Tpo .deps/libmatrices_la-sqmatrix.Plo mv -f .deps/libmatrices_la-eigensolver.Tpo .deps/libmatrices_la-eigensolver.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmatrices.la libmatrices_la-blasglue.lo libmatrices_la-eigensolver.lo libmatrices_la-eigensolver_davidson.lo libmatrices_la-eigensolver_utils.lo libmatrices_la-evectmatrix.lo libmatrices_la-linmin.lo libmatrices_la-matrices.lo libmatrices_la-minpack2-linmin.lo libmatrices_la-sqmatrix.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmatrices.a libmatrices_la-blasglue.o libmatrices_la-eigensolver.o libmatrices_la-eigensolver_davidson.o libmatrices_la-eigensolver_utils.o libmatrices_la-evectmatrix.o libmatrices_la-linmin.o libmatrices_la-matrices.o libmatrices_la-minpack2-linmin.o libmatrices_la-sqmatrix.o libtool: link: ranlib .libs/libmatrices.a libtool: link: ( cd ".libs" && rm -f "libmatrices.la" && ln -s "../libmatrices.la" "libmatrices.la" ) make[6]: Leaving directory '/<>/src/matrices' Making all in matrixio make[6]: Entering directory '/<>/src/matrixio' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-evectmatrixio.o -MD -MP -MF .deps/libmatrixio_a-evectmatrixio.Tpo -c -o libmatrixio_a-evectmatrixio.o `test -f 'evectmatrixio.c' || echo './'`evectmatrixio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-fieldio.o -MD -MP -MF .deps/libmatrixio_a-fieldio.Tpo -c -o libmatrixio_a-fieldio.o `test -f 'fieldio.c' || echo './'`fieldio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-matrixio.o -MD -MP -MF .deps/libmatrixio_a-matrixio.Tpo -c -o libmatrixio_a-matrixio.o `test -f 'matrixio.c' || echo './'`matrixio.c matrixio.c: In function ‘matrixio_open_’: matrixio.c:405:91: warning: statement with no effect [-Wunused-value] 405 | IF_EXCLUSIVE(if (parallel) mpi_begin_critical_section(matrixio_critical_section_tag),0); | ^ matrixio.c:56:32: note: in definition of macro ‘IF_EXCLUSIVE’ 56 | # define IF_EXCLUSIVE(yes,no) no | ^~ matrixio.c: In function ‘matrixio_close’: matrixio.c:432:94: warning: statement with no effect [-Wunused-value] 432 | IF_EXCLUSIVE(if (id.parallel) mpi_end_critical_section(matrixio_critical_section_tag++),0); | ^ matrixio.c:56:32: note: in definition of macro ‘IF_EXCLUSIVE’ 56 | # define IF_EXCLUSIVE(yes,no) no | ^~ In file included from matrixio.c:29: matrixio.c: In function ‘matrixio_open_dataset’: matrixio.c:516:30: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 516 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ matrixio.c: In function ‘matrixio_read_real_data’: fieldio.c:41:46: warning: argument 8 of type ‘const real *’ {aka ‘const double *’} declared as a pointer [-Warray-parameter=] 41 | const real *kvector, | ~~~~~~~~~~~~^~~~~~~ matrixio.c:837:35: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 837 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ In file included from fieldio.c:28: matrixio.h:95:52: note: previously declared as an array ‘const real[3]’ {aka ‘const double[3]’} 95 | const real kvector[3], | ~~~~~~~~~~~^~~~~~~~~~ mv -f .deps/libmatrixio_a-evectmatrixio.Tpo .deps/libmatrixio_a-evectmatrixio.Po mv -f .deps/libmatrixio_a-fieldio.Tpo .deps/libmatrixio_a-fieldio.Po mv -f .deps/libmatrixio_a-matrixio.Tpo .deps/libmatrixio_a-matrixio.Po rm -f libmatrixio.a ar cru libmatrixio.a libmatrixio_a-evectmatrixio.o libmatrixio_a-fieldio.o libmatrixio_a-matrixio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmatrixio.a make[6]: Leaving directory '/<>/src/matrixio' Making all in maxwell make[6]: Entering directory '/<>/src/maxwell' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c -o libmaxwell_la-maxwell.lo `test -f 'maxwell.c' || echo './'`maxwell.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c -o libmaxwell_la-maxwell_constraints.lo `test -f 'maxwell_constraints.c' || echo './'`maxwell_constraints.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c -o libmaxwell_la-maxwell_eps.lo `test -f 'maxwell_eps.c' || echo './'`maxwell_eps.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c -o libmaxwell_la-maxwell_op.lo `test -f 'maxwell_op.c' || echo './'`maxwell_op.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c maxwell_constraints.c -o libmaxwell_la-maxwell_constraints.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c maxwell.c -o libmaxwell_la-maxwell.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c maxwell_eps.c -o libmaxwell_la-maxwell_eps.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c maxwell_op.c -o libmaxwell_la-maxwell_op.o In file included from maxwell_eps.c:29: maxwell_eps.c: In function ‘set_maxwell_dielectric’: xyz_loop.h:28:28: warning: unused variable ‘n2’ [-Wunused-variable] 28 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ | ^~ maxwell_eps.c:421:6: note: in expansion of macro ‘LOOP_XYZ’ 421 | LOOP_XYZ(md) { | ^~~~~~~~ maxwell_eps.c:401:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 401 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ maxwell_eps.c:401:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 401 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ maxwell_eps.c:401:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 401 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ maxwell_eps.c:395:16: warning: unused variable ‘k’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:13: warning: unused variable ‘j’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:10: warning: unused variable ‘i’ [-Wunused-variable] 395 | int i, j, k; | ^ At top level: maxwell_eps.c:181:12: warning: ‘sym_matrix_eq’ defined but not used [-Wunused-function] 181 | static int sym_matrix_eq(symmetric_matrix V1, symmetric_matrix V2, double tol) | ^~~~~~~~~~~~~ maxwell_op.c: In function ‘maxwell_compute_fft’: maxwell_op.c:177:12: warning: unused variable ‘rarray_out’ [-Wunused-variable] 177 | real *rarray_out = (real *) array_out; | ^~~~~~~~~~ maxwell_op.c:175:12: warning: unused variable ‘rarray_in’ [-Wunused-variable] 175 | real *rarray_in = (real *) array_in; | ^~~~~~~~~ maxwell_op.c: In function ‘maxwell_vectorfield_otherhalf’: maxwell_op.c:637:50: warning: unused parameter ‘d’ [-Wunused-parameter] 637 | void maxwell_vectorfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~^ maxwell_op.c:637:69: warning: unused parameter ‘field’ [-Wunused-parameter] 637 | void maxwell_vectorfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~~~^~~~~ maxwell_op.c:638:41: warning: unused parameter ‘phasex’ [-Wunused-parameter] 638 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:638:54: warning: unused parameter ‘phasey’ [-Wunused-parameter] 638 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:638:67: warning: unused parameter ‘phasez’ [-Wunused-parameter] 638 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c: In function ‘maxwell_cscalarfield_otherhalf’: maxwell_op.c:841:51: warning: unused parameter ‘d’ [-Wunused-parameter] 841 | void maxwell_cscalarfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~^ maxwell_op.c:841:70: warning: unused parameter ‘field’ [-Wunused-parameter] 841 | void maxwell_cscalarfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~~~^~~~~ maxwell_op.c:842:42: warning: unused parameter ‘phasex’ [-Wunused-parameter] 842 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:842:55: warning: unused parameter ‘phasey’ [-Wunused-parameter] 842 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:842:68: warning: unused parameter ‘phasez’ [-Wunused-parameter] 842 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c: In function ‘maxwell_scalarfield_otherhalf’: maxwell_op.c:1042:50: warning: unused parameter ‘d’ [-Wunused-parameter] 1042 | void maxwell_scalarfield_otherhalf(maxwell_data *d, real *field) | ~~~~~~~~~~~~~~^ maxwell_op.c:1042:59: warning: unused parameter ‘field’ [-Wunused-parameter] 1042 | void maxwell_scalarfield_otherhalf(maxwell_data *d, real *field) | ~~~~~~^~~~~ mv -f .deps/libmaxwell_la-maxwell.Tpo .deps/libmaxwell_la-maxwell.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c -o libmaxwell_la-maxwell_pre.lo `test -f 'maxwell_pre.c' || echo './'`maxwell_pre.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c maxwell_pre.c -o libmaxwell_la-maxwell_pre.o mv -f .deps/libmaxwell_la-maxwell_constraints.Tpo .deps/libmaxwell_la-maxwell_constraints.Plo mv -f .deps/libmaxwell_la-maxwell_eps.Tpo .deps/libmaxwell_la-maxwell_eps.Plo mv -f .deps/libmaxwell_la-maxwell_op.Tpo .deps/libmaxwell_la-maxwell_op.Plo mv -f .deps/libmaxwell_la-maxwell_pre.Tpo .deps/libmaxwell_la-maxwell_pre.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmaxwell.la libmaxwell_la-maxwell.lo libmaxwell_la-maxwell_constraints.lo libmaxwell_la-maxwell_eps.lo libmaxwell_la-maxwell_op.lo libmaxwell_la-maxwell_pre.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmaxwell.a libmaxwell_la-maxwell.o libmaxwell_la-maxwell_constraints.o libmaxwell_la-maxwell_eps.o libmaxwell_la-maxwell_op.o libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmaxwell.a libtool: link: ( cd ".libs" && rm -f "libmaxwell.la" && ln -s "../libmaxwell.la" "libmaxwell.la" ) make[6]: Leaving directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -no-undefined -version-info 5:1:4 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmpb_mpi.la -rpath /usr/lib util/libutil.la matrices/libmatrices.la maxwell/libmaxwell.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: (cd .libs/libmpb_mpi.lax/libutil.a && ar x "/<>/src/util/.libs/libutil.a") libtool: link: (cd .libs/libmpb_mpi.lax/libmatrices.a && ar x "/<>/src/matrices/.libs/libmatrices.a") libtool: link: (cd .libs/libmpb_mpi.lax/libmaxwell.a && ar x "/<>/src/maxwell/.libs/libmaxwell.a") libtool: link: ar cr .libs/libmpb_mpi.a .libs/libmpb_mpi.lax/libutil.a/debug_malloc.o .libs/libmpb_mpi.lax/libutil.a/mpi_utils.o .libs/libmpb_mpi.lax/libutil.a/verbosity.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-blasglue.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-eigensolver.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-eigensolver_davidson.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-eigensolver_utils.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-evectmatrix.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-linmin.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-matrices.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-minpack2-linmin.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-sqmatrix.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_constraints.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_eps.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_op.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmpb_mpi.a libtool: link: rm -fr .libs/libmpb_mpi.lax libtool: link: ( cd ".libs" && rm -f "libmpb_mpi.la" && ln -s "../libmpb_mpi.la" "libmpb_mpi.la" ) make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' Making all in tests make[4]: Entering directory '/<>/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT malloctest.o -MD -MP -MF .deps/malloctest.Tpo -c -o malloctest.o malloctest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT blastest.o -MD -MP -MF .deps/blastest.Tpo -c -o blastest.o blastest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT eigs_test.o -MD -MP -MF .deps/eigs_test.Tpo -c -o eigs_test.o eigs_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT maxwell_test.o -MD -MP -MF .deps/maxwell_test.Tpo -c -o maxwell_test.o maxwell_test.c eigs_test.c: In function ‘Aop’: eigs_test.c:293:51: warning: unused parameter ‘data’ [-Wunused-parameter] 293 | void Aop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:294:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:294:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Bop’: eigs_test.c:303:51: warning: unused parameter ‘data’ [-Wunused-parameter] 303 | void Bop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:304:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:304:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Ainvop’: eigs_test.c:313:54: warning: unused parameter ‘data’ [-Wunused-parameter] 313 | void Ainvop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:314:25: warning: unused parameter ‘Y’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:314:34: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c:314:54: warning: unused parameter ‘YtY’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~^~~ eigs_test.c: In function ‘Cop_old’: eigs_test.c:324:55: warning: unused parameter ‘data’ [-Wunused-parameter] 324 | void Cop_old(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:325:22: warning: unused parameter ‘Y’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:325:31: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c: In function ‘Cop’: eigs_test.c:349:51: warning: unused parameter ‘data’ [-Wunused-parameter] 349 | void Cop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:350:23: warning: unused parameter ‘Y’ [-Wunused-parameter] 350 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ mv -f .deps/malloctest.Tpo .deps/malloctest.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT normal_vectors-normal_vectors.o -MD -MP -MF .deps/normal_vectors-normal_vectors.Tpo -c -o normal_vectors-normal_vectors.o `test -f 'normal_vectors.c' || echo './'`normal_vectors.c mv -f .deps/blastest.Tpo .deps/blastest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/normal_vectors-normal_vectors.Tpo .deps/normal_vectors-normal_vectors.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/maxwell_test.Tpo .deps/maxwell_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/eigs_test.Tpo .deps/eigs_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/<>/tests' Making all in mpb make[4]: Entering directory '/<>/mpb' cp -f /usr/share/libctl/base/main.c main.c cp -f /usr/share/libctl/utils/geom.c geom.c gen-ctl-io --header -o ctl-io.h mpb.scm /usr/share/libctl gen-ctl-io --code -o ctl-io.c mpb.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" make all-am make[5]: Entering directory '/<>/mpb' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-medium.o -MD -MP -MF .deps/mpb_mpi-medium.Tpo -c -o mpb_mpi-medium.o `test -f 'medium.c' || echo './'`medium.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-epsilon_file.o -MD -MP -MF .deps/mpb_mpi-epsilon_file.Tpo -c -o mpb_mpi-epsilon_file.o `test -f 'epsilon_file.c' || echo './'`epsilon_file.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-field-smob.o -MD -MP -MF .deps/mpb_mpi-field-smob.Tpo -c -o mpb_mpi-field-smob.o `test -f 'field-smob.c' || echo './'`field-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-fields.o -MD -MP -MF .deps/mpb_mpi-fields.Tpo -c -o mpb_mpi-fields.o `test -f 'fields.c' || echo './'`fields.c field-smob.c: In function ‘update_curfield_smob’: field-smob.c:142:10: warning: implicit declaration of function ‘strchr’ [-Wimplicit-function-declaration] 142 | if (strchr("dhbecv", curfield_type)) { /* complex vector field */ | ^~~~~~ field-smob.c:30:1: note: include ‘’ or provide a declaration of ‘strchr’ 29 | #include "mpb.h" +++ |+#include 30 | field-smob.c:142:10: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 142 | if (strchr("dhbecv", curfield_type)) { /* complex vector field */ | ^~~~~~ field-smob.c:142:10: note: include ‘’ or provide a declaration of ‘strchr’ field-smob.c: In function ‘cur_fieldp’: field-smob.c:176:22: warning: implicit declaration of function ‘strcmp’ [-Wimplicit-function-declaration] 176 | int ret = !strcmp(s, "cur-field"); | ^~~~~~ field-smob.c:176:22: note: include ‘’ or provide a declaration of ‘strcmp’ field-smob.c: In function ‘integrate_fieldL’: field-smob.c:409:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 409 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ field-smob.c:407:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ field-smob.c:407:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ field-smob.c:407:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ field-smob.c:407:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ In file included from medium.c:75: epsilon.c: In function ‘get_epsilon’: epsilon.c:434:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ epsilon.c:434:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ epsilon.c:434:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ epsilon.c:434:26: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ epsilon.c:434:16: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ At top level: field-smob.c:395:17: warning: ‘cvector3_conj’ defined but not used [-Wunused-function] 395 | static cvector3 cvector3_conj(cvector3 c) | ^~~~~~~~~~~~~ In file included from medium.c:76: mu.c: In function ‘get_mu’: mu.c:434:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ mu.c:434:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ mu.c:434:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ mu.c:434:26: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ mu.c:434:16: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ fields.c: In function ‘compute_field_energy_internal’: fields.c:229:50: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ fields.c:229:46: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:229:42: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:229:25: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ fields.c:229:15: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ fields.c: In function ‘compute_field_energy’: fields.c:317:24: warning: implicit declaration of function ‘strchr’ [-Wimplicit-function-declaration] 317 | if (!curfield || !strchr("dhb", curfield_type)) { | ^~~~~~ fields.c:37:1: note: include ‘’ or provide a declaration of ‘strchr’ 36 | #include "field-smob.h" +++ |+#include 37 | fields.c:317:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 317 | if (!curfield || !strchr("dhb", curfield_type)) { | ^~~~~~ fields.c:317:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘compute_field_squared’: fields.c:358:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 358 | if (!curfield || !strchr("dhbecv", curfield_type)) { | ^~~~~~ fields.c:358:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘compute_field_divergence’: fields.c:379:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 379 | if (!curfield || !strchr("dhbec", curfield_type)) { | ^~~~~~ fields.c:379:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘fix_field_phase’: fields.c:449:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 449 | if (!curfield || !strchr("dhbecv", curfield_type)) { | ^~~~~~ fields.c:449:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘get_val’: fields.c:557:33: warning: unused parameter ‘ny’ [-Wunused-parameter] 557 | int nx, int ny, int nz, int last_dim_size, | ~~~~^~ fields.c:557:49: warning: unused parameter ‘last_dim_size’ [-Wunused-parameter] 557 | int nx, int ny, int nz, int last_dim_size, | ~~~~^~~~~~~~~~~~~ In file included from fields.c:25: fields.c: In function ‘get_energy_point’: fields.c:704:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 704 | CHECK(curfield && strchr("DHBR", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:704:24: note: include ‘’ or provide a declaration of ‘strchr’ 704 | CHECK(curfield && strchr("DHBR", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_bloch_field_point’: fields.c:714:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 714 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:714:24: note: include ‘’ or provide a declaration of ‘strchr’ 714 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_field_point’: fields.c:730:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 730 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:730:24: note: include ‘’ or provide a declaration of ‘strchr’ 730 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_bloch_cscalar_point’: fields.c:755:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 755 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:755:24: note: include ‘’ or provide a declaration of ‘strchr’ 755 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_cscalar_point’: fields.c:765:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 765 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:765:24: note: include ‘’ or provide a declaration of ‘strchr’ 765 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘compute_energy_in_dielectric’: fields.c:877:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 877 | if (!curfield || !strchr("DHBR", curfield_type)) { | ^~~~~~ fields.c:877:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:873:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ fields.c:873:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:873:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:873:26: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ fields.c:873:16: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ In file included from fields.c:25: fields.c: In function ‘fix_fname’: fields.c:927:26: warning: implicit declaration of function ‘strlen’ [-Wimplicit-function-declaration] 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:927:26: note: include ‘’ or provide a declaration of ‘strlen’ 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:927:26: warning: incompatible implicit declaration of built-in function ‘strlen’ [-Wbuiltin-declaration-mismatch] 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:927:26: note: include ‘’ or provide a declaration of ‘strlen’ 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:929:6: warning: implicit declaration of function ‘strcpy’ [-Wimplicit-function-declaration] 929 | strcpy(s, prefix ? prefix : ""); | ^~~~~~ fields.c:929:6: note: include ‘’ or provide a declaration of ‘strcpy’ fields.c:929:6: warning: incompatible implicit declaration of built-in function ‘strcpy’ [-Wbuiltin-declaration-mismatch] fields.c:929:6: note: include ‘’ or provide a declaration of ‘strcpy’ fields.c:930:6: warning: implicit declaration of function ‘strcat’ [-Wimplicit-function-declaration] 930 | strcat(s, fname ? fname : ""); | ^~~~~~ fields.c:930:6: note: include ‘’ or provide a declaration of ‘strcat’ fields.c:930:6: warning: incompatible implicit declaration of built-in function ‘strcat’ [-Wbuiltin-declaration-mismatch] fields.c:930:6: note: include ‘’ or provide a declaration of ‘strcat’ fields.c: In function ‘output_scalarfield’: fields.c:946:36: warning: unused parameter ‘last_dim_index’ [-Wunused-parameter] 946 | int last_dim_index, | ~~~~^~~~~~~~~~~~~~ fields.c:947:36: warning: unused parameter ‘last_dim_start’ [-Wunused-parameter] 947 | int last_dim_start, int last_dim_size, | ~~~~^~~~~~~~~~~~~~ fields.c:947:56: warning: unused parameter ‘last_dim_size’ [-Wunused-parameter] 947 | int last_dim_start, int last_dim_size, | ~~~~^~~~~~~~~~~~~ fields.c:948:36: warning: unused parameter ‘first_dim_start’ [-Wunused-parameter] 948 | int first_dim_start, int first_dim_size, | ~~~~^~~~~~~~~~~~~~~ fields.c:948:57: warning: unused parameter ‘first_dim_size’ [-Wunused-parameter] 948 | int first_dim_start, int first_dim_size, | ~~~~^~~~~~~~~~~~~~ fields.c:949:36: warning: unused parameter ‘write_start0_special’ [-Wunused-parameter] 949 | int write_start0_special) | ~~~~^~~~~~~~~~~~~~~~~~~~ fields.c: In function ‘output_field_to_file’: fields.c:1100:10: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1100 | if (strchr("Rv", curfield_type)) /* generic scalar/vector field */ | ^~~~~~ fields.c:1100:10: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1103:10: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1103 | if (strchr("dhbecv", curfield_type)) { /* outputting vector field */ | ^~~~~~ fields.c:1103:10: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1112:16: warning: incompatible implicit declaration of built-in function ‘strcat’ [-Wbuiltin-declaration-mismatch] 1112 | strcat(fname, comp_str); | ^~~~~~ fields.c:1112:16: note: include ‘’ or provide a declaration of ‘strcat’ fields.c: In function ‘compute_energy_in_object_list’: fields.c:1317:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1317 | if (!curfield || !strchr("DHBR", curfield_type)) { | ^~~~~~ fields.c:1317:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1322:6: warning: ‘geom_fix_objects0’ is deprecated [-Wdeprecated-declarations] 1322 | geom_fix_objects0(objects); | ^~~~~~~~~~~~~~~~~ In file included from fields.c:33: /usr/include/ctlgeom.h:65:13: note: declared here 65 | extern void geom_fix_objects0(GEOMETRIC_OBJECT_LIST geometry) CTLGEOM_DEPRECATED; | ^~~~~~~~~~~~~~~~~ In file included from fields.c:30: ../src/maxwell/xyz_loop.h:28:28: warning: unused variable ‘n2’ [-Wunused-variable] 28 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ | ^~ fields.c:1337:6: note: in expansion of macro ‘LOOP_XYZ’ 1337 | LOOP_XYZ(mdata) { | ^~~~~~~~ fields.c:1311:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 1311 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1311:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 1311 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ fields.c:1311:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 1311 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1309:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ fields.c:1309:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1309:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1309:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1309:16: warning: unused variable ‘k’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1309:13: warning: unused variable ‘j’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1309:10: warning: unused variable ‘i’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_field_integral’: fields.c:1387:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1387 | if (!curfield || !strchr("dhbeDHBRcv", curfield_type)) { | ^~~~~~ fields.c:1387:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1394:25: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1394 | integrate_energy = strchr("DHBR", curfield_type) != NULL; | ^~~~~~ fields.c:1394:25: note: include ‘’ or provide a declaration of ‘strchr’ In file included from fields.c:30: ../src/maxwell/xyz_loop.h:28:28: warning: unused variable ‘n2’ [-Wunused-variable] 28 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ | ^~ fields.c:1409:6: note: in expansion of macro ‘LOOP_XYZ’ 1409 | LOOP_XYZ(mdata) { | ^~~~~~~~ fields.c:1379:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 1379 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1379:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 1379 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ fields.c:1379:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 1379 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1377:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ fields.c:1377:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1377:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1377:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1377:16: warning: unused variable ‘k’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:13: warning: unused variable ‘j’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:10: warning: unused variable ‘i’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_energy_integral’: fields.c:1531:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1531 | if (!curfield || !strchr("DHBR", curfield_type)) { | ^~~~~~ fields.c:1531:24: note: include ‘’ or provide a declaration of ‘strchr’ mv -f .deps/mpb_mpi-epsilon_file.Tpo .deps/mpb_mpi-epsilon_file.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-material_grid.o -MD -MP -MF .deps/mpb_mpi-material_grid.Tpo -c -o mpb_mpi-material_grid.o `test -f 'material_grid.c' || echo './'`material_grid.c mu.c: In function ‘mean_mu_func’: mu.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ mu.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ In file included from material_grid.c:27: material_grid.c: In function ‘material_grids_addgradient’: ../src/maxwell/xyz_loop.h:28:28: warning: unused variable ‘n2’ [-Wunused-variable] 28 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ | ^~ material_grid.c:419:6: note: in expansion of macro ‘LOOP_XYZ’ 419 | LOOP_XYZ(mdata) { | ^~~~~~~~ material_grid.c:392:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 392 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ material_grid.c:392:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 392 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ material_grid.c:392:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 392 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ material_grid.c:390:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ material_grid.c:390:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:390:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:390:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ material_grid.c:390:16: warning: unused variable ‘k’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:13: warning: unused variable ‘j’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: In function ‘print_material_grids_deps_du’: material_grid.c:545:16: warning: implicit declaration of function ‘memset’ [-Wimplicit-function-declaration] 545 | memset(v, 0, sizeof(double) * ntot); | ^~~~~~ material_grid.c:30:1: note: include ‘’ or provide a declaration of ‘memset’ 29 | #include "mpb.h" +++ |+#include 30 | material_grid.c:545:16: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 545 | memset(v, 0, sizeof(double) * ntot); | ^~~~~~ material_grid.c:545:16: note: include ‘’ or provide a declaration of ‘memset’ material_grid.c: In function ‘print_material_grids_deps_du_numeric’: material_grid.c:634:14: warning: unused variable ‘foo’ [-Wunused-variable] 634 | double *foo; | ^~~ material_grid.c: In function ‘match_eps_func’: material_grid.c:824:16: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 824 | if (grad) memset(work, 0, sizeof(double) * n); | ^~~~~~ material_grid.c:824:16: note: include ‘’ or provide a declaration of ‘memset’ material_grid.c:818:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 818 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ material_grid.c:816:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ material_grid.c:816:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:816:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:816:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ At top level: material_grid.c:807:15: warning: ‘match_eps_func’ defined but not used [-Wunused-function] 807 | static double match_eps_func(int n, const double *u, double *grad, void *data) | ^~~~~~~~~~~~~~ In file included from medium.c:75: epsilon.c: In function ‘mean_epsilon_func’: epsilon.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ epsilon.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ mv -f .deps/mpb_mpi-field-smob.Tpo .deps/mpb_mpi-field-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-material_grid_opt.o -MD -MP -MF .deps/mpb_mpi-material_grid_opt.Tpo -c -o mpb_mpi-material_grid_opt.o `test -f 'material_grid_opt.c' || echo './'`material_grid_opt.c material_grid_opt.c: In function ‘mindiff_func’: material_grid_opt.c:59:15: warning: implicit declaration of function ‘memset’ [-Wimplicit-function-declaration] 59 | if (grad) memset(work, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:30:1: note: include ‘’ or provide a declaration of ‘memset’ 29 | #include "mpb.h" +++ |+#include 30 | material_grid_opt.c:59:15: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 59 | if (grad) memset(work, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:59:15: note: include ‘’ or provide a declaration of ‘memset’ material_grid_opt.c: In function ‘material_grids_min_tetm_gap’: material_grid_opt.c:90:43: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 90 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:91:44: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:91:60: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ material_grid_opt.c: In function ‘band_constraint’: material_grid_opt.c:191:16: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 191 | if (grad) memset(work, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:191:16: note: include ‘’ or provide a declaration of ‘memset’ material_grid_opt.c: In function ‘maxgap_func’: material_grid_opt.c:232:11: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 232 | memset(grad, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:232:11: note: include ‘’ or provide a declaration of ‘memset’ material_grid_opt.c: In function ‘material_grids_maxmin_gap’: material_grid_opt.c:258:48: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 258 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:259:49: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:259:65: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ mv -f .deps/mpb_mpi-material_grid_opt.Tpo .deps/mpb_mpi-material_grid_opt.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-matrix-smob.o -MD -MP -MF .deps/mpb_mpi-matrix-smob.Tpo -c -o mpb_mpi-matrix-smob.o `test -f 'matrix-smob.c' || echo './'`matrix-smob.c mv -f .deps/mpb_mpi-medium.Tpo .deps/mpb_mpi-medium.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-mpb.o -MD -MP -MF .deps/mpb_mpi-mpb.Tpo -c -o mpb_mpi-mpb.o `test -f 'mpb.c' || echo './'`mpb.c mv -f .deps/mpb_mpi-fields.Tpo .deps/mpb_mpi-fields.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-main.o -MD -MP -MF .deps/mpb_mpi-main.Tpo -c -o mpb_mpi-main.o `test -f 'main.c' || echo './'`main.c mv -f .deps/mpb_mpi-material_grid.Tpo .deps/mpb_mpi-material_grid.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-geom.o -MD -MP -MF .deps/mpb_mpi-geom.Tpo -c -o mpb_mpi-geom.o `test -f 'geom.c' || echo './'`geom.c In file included from ctl-io.h:7, from main.c:37: main.c: In function ‘main_entry’: main.c:194:31: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 194 | gh_new_procedure("subplex", (SCM(*)(void))subplex_scm, 7, 0, 0); | ^ main.c:202:44: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 202 | gh_new_procedure("adaptive-integration", (SCM(*)(void))adaptive_integration_scm, 6, 0, 0); | ^ main.c:205:45: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^ mv -f .deps/mpb_mpi-matrix-smob.Tpo .deps/mpb_mpi-matrix-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-ctl-io.o -MD -MP -MF .deps/mpb_mpi-ctl-io.Tpo -c -o mpb_mpi-ctl-io.o `test -f 'ctl-io.c' || echo './'`ctl-io.c geom.c: In function ‘overlap_integrand’: geom.c:1156:10: warning: unused variable ‘s’ [-Wunused-variable] 1156 | double s[2]; | ^ geom.c: In function ‘point_in_or_on_prism’: geom.c:2110:10: warning: unused variable ‘height’ [-Wunused-variable] 2110 | double height = prsm->height; | ^~~~~~ geom.c: In function ‘dcmp’: geom.c:2137:17: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c:2137:40: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ mv -f .deps/mpb_mpi-main.Tpo .deps/mpb_mpi-main.Po geom.c: In function ‘normal_to_prism’: geom.c:2357:11: warning: unused variable ‘axisp’ [-Wunused-variable] 2357 | vector3 axisp = vector3_scale(height, zhatp); | ^~~~~ geom.c: In function ‘triangle_normal’: geom.c:2548:10: warning: unused variable ‘nvnorm’ [-Wunused-variable] 2548 | double nvnorm = vector3_norm(nv); | ^~~~~~ ctl-io.c: In function ‘block_equal’: ctl-io.c:639:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 639 | else ; | ^ ctl-io.c: In function ‘cylinder_equal’: ctl-io.c:679:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 679 | else ; | ^ ctl-io.c: In function ‘geometric_object_equal’: ctl-io.c:716:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 716 | else ; | ^ ctl-io.c: In function ‘material_type_equal’: ctl-io.c:776:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 776 | else ; | ^ ctl-io.c: In function ‘lattice_destroy’: ctl-io.c:782:30: warning: unused parameter ‘o’ [-Wunused-parameter] 782 | void lattice_destroy(lattice o) | ~~~~~~~~^ ctl-io.c: In function ‘ellipsoid_destroy’: ctl-io.c:786:34: warning: unused parameter ‘o’ [-Wunused-parameter] 786 | void ellipsoid_destroy(ellipsoid o) | ~~~~~~~~~~^ ctl-io.c: In function ‘sphere_destroy’: ctl-io.c:845:28: warning: unused parameter ‘o’ [-Wunused-parameter] 845 | void sphere_destroy(sphere o) | ~~~~~~~^ ctl-io.c: In function ‘wedge_destroy’: ctl-io.c:849:26: warning: unused parameter ‘o’ [-Wunused-parameter] 849 | void wedge_destroy(wedge o) | ~~~~~~^ ctl-io.c: In function ‘cone_destroy’: ctl-io.c:853:24: warning: unused parameter ‘o’ [-Wunused-parameter] 853 | void cone_destroy(cone o) | ~~~~~^ ctl-io.c: In function ‘material_grid_destroy’: ctl-io.c:907:42: warning: unused parameter ‘o’ [-Wunused-parameter] 907 | void material_grid_destroy(material_grid o) | ~~~~~~~~~~~~~~^ ctl-io.c: In function ‘material_function_destroy’: ctl-io.c:911:50: warning: unused parameter ‘o’ [-Wunused-parameter] 911 | void material_function_destroy(material_function o) | ~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_anisotropic_destroy’: ctl-io.c:915:52: warning: unused parameter ‘o’ [-Wunused-parameter] 915 | void medium_anisotropic_destroy(medium_anisotropic o) | ~~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_destroy’: ctl-io.c:919:28: warning: unused parameter ‘o’ [-Wunused-parameter] 919 | void medium_destroy(medium o) | ~~~~~~~^ mv -f .deps/mpb_mpi-mpb.Tpo .deps/mpb_mpi-mpb.Po mv -f .deps/mpb_mpi-ctl-io.Tpo .deps/mpb_mpi-ctl-io.Po mv -f .deps/mpb_mpi-geom.Tpo .deps/mpb_mpi-geom.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpb_mpi mpb_mpi-medium.o mpb_mpi-epsilon_file.o mpb_mpi-field-smob.o mpb_mpi-fields.o mpb_mpi-material_grid.o mpb_mpi-material_grid_opt.o mpb_mpi-matrix-smob.o mpb_mpi-mpb.o mpb_mpi-main.o mpb_mpi-geom.o mpb_mpi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/libmpb_mpi.la -lctl -lguile-3.0 -lgc -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpb_mpi mpb_mpi-medium.o mpb_mpi-epsilon_file.o mpb_mpi-field-smob.o mpb_mpi-fields.o mpb_mpi-material_grid.o mpb_mpi-material_grid_opt.o mpb_mpi-matrix-smob.o mpb_mpi-mpb.o mpb_mpi-main.o mpb_mpi-geom.o mpb_mpi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lctl -lguile-3.0 -lgc -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath epsilon.c: In function 'mean_epsilon_func': epsilon.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ epsilon.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ mu.c: In function 'mean_mu_func': mu.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ mu.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' Making all in examples make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/examples' Making all in utils make[4]: Entering directory '/<>/utils' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/utils' make[4]: Entering directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make install prefix=/<>/debian/build-tmp/mpb-mpi/usr make[2]: Entering directory '/<>' Making install in src make[3]: Entering directory '/<>/src' make install-recursive make[4]: Entering directory '/<>/src' Making install in util make[5]: Entering directory '/<>/src/util' make install-am make[6]: Entering directory '/<>/src/util' make[7]: Entering directory '/<>/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' make[5]: Leaving directory '/<>/src/util' Making install in matrices make[5]: Entering directory '/<>/src/matrices' make[6]: Entering directory '/<>/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrices' make[5]: Leaving directory '/<>/src/matrices' Making install in matrixio make[5]: Entering directory '/<>/src/matrixio' make[6]: Entering directory '/<>/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrixio' make[5]: Leaving directory '/<>/src/matrixio' Making install in maxwell make[5]: Entering directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/maxwell' make[5]: Leaving directory '/<>/src/maxwell' make[5]: Entering directory '/<>/src' make[6]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpb_mpi.la '/<>/debian/build-tmp/mpb-mpi/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpb_mpi.lai /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpb_mpi.la libtool: install: /usr/bin/install -c .libs/libmpb_mpi.a /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpb_mpi.a libtool: install: chmod 644 /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpb_mpi.a libtool: install: ranlib /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpb_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/include' /usr/bin/install -c -m 644 mpb_mpi.h '/<>/debian/build-tmp/mpb-mpi/usr/include' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h util/verbosity.h '/<>/debian/build-tmp/mpb-mpi/usr/include/mpb' make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making install in tests make[3]: Entering directory '/<>/tests' make[4]: Entering directory '/<>/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/tests' make[3]: Leaving directory '/<>/tests' Making install in mpb make[3]: Entering directory '/<>/mpb' make install-am make[4]: Entering directory '/<>/mpb' make[5]: Entering directory '/<>/mpb' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpb_mpi '/<>/debian/build-tmp/mpb-mpi/usr/bin/./mpb-mpi' libtool: install: /usr/bin/install -c mpb_mpi /<>/debian/build-tmp/mpb-mpi/usr/bin/./mpb-mpi /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/<>/debian/build-tmp/mpb-mpi/usr/share/mpb' make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' make[3]: Leaving directory '/<>/mpb' Making install in examples make[3]: Entering directory '/<>/examples' make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/examples' make[3]: Leaving directory '/<>/examples' Making install in utils make[3]: Entering directory '/<>/utils' make[4]: Entering directory '/<>/utils' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' make[4]: Leaving directory '/<>/utils' make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make clean make[2]: Entering directory '/<>' Making clean in src make[3]: Entering directory '/<>/src' Making clean in util make[4]: Entering directory '/<>/src/util' rm -rf .libs _libs test -z "libutil.la" || rm -f libutil.la rm -f ./so_locations rm -f sphere_quad rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/util' Making clean in matrices make[4]: Entering directory '/<>/src/matrices' rm -rf .libs _libs test -z "libmatrices.la" || rm -f libmatrices.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/matrices' Making clean in matrixio make[4]: Entering directory '/<>/src/matrixio' rm -rf .libs _libs test -z "libmatrixio.a" || rm -f libmatrixio.a rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/matrixio' Making clean in maxwell make[4]: Entering directory '/<>/src/maxwell' rm -rf .libs _libs test -z "libmaxwell.la" || rm -f libmaxwell.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/maxwell' make[4]: Entering directory '/<>/src' test -z "libmpb_mpi.la" || rm -f libmpb_mpi.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making clean in tests make[3]: Entering directory '/<>/tests' rm -rf .libs _libs rm -f blastest.out rm -f malloctest blastest eigs_test maxwell_test normal_vectors rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/tests' Making clean in mpb make[3]: Entering directory '/<>/mpb' rm -f mpb_mpi rm -rf .libs _libs rm -f ctl-io.* main.* geom.* rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/mpb' Making clean in examples make[3]: Entering directory '/<>/examples' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/<>/examples' Making clean in utils make[3]: Entering directory '/<>/utils' rm -rf .libs _libs rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' echo "Step3: mpi version end" Step3: mpi version end # version with inverse symmetry with mpi echo "Step4: mpi inv version start" Step4: mpi inv version start #XXX dh_auto_configure -- --with-mpi --with-inv-symmetry --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode F77=gfortran CC=mpicc SH_JOB=/bin/bash ./configure --with-mpi --with-inv-symmetry --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode configure: loading cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... (cached) /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... (cached) /usr/bin/mkdir -p checking for gawk... (cached) mawk checking whether make sets $(MAKE)... (cached) yes checking whether make supports nested variables... (cached) yes checking whether make supports nested variables... (cached) yes checking build system type... (cached) x86_64-pc-linux-gnu checking host system type... (cached) x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... (cached) o checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/grep -E checking for fgrep... (cached) /usr/bin/grep -F checking for ld used by mpicc... (cached) /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... (cached) yes checking for BSD- or MS-compatible name lister (nm)... (cached) /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... (cached) func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... (cached) func_convert_file_noop checking for /usr/bin/ld option to reload object files... (cached) -r checking for objdump... (cached) objdump checking how to recognize dependent libraries... (cached) pass_all checking for dlltool... no checking how to associate runtime and link libraries... (cached) printf %s\n checking for ar... (cached) ar checking for archiver @FILE support... (cached) @ checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from mpicc object... (cached) ok checking for sysroot... no checking for a working dd... (cached) /usr/bin/dd checking how to truncate binary pipes... (cached) /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... (cached) no checking for stdio.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for strings.h... (cached) yes checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... (cached) .libs checking if mpicc supports -fno-rtti -fno-exceptions... (cached) no checking for mpicc option to produce PIC... (cached) -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... (cached) yes checking if mpicc static flag -static works... (cached) no checking if mpicc supports -c -o file.o... (cached) yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether the compiler supports GNU Fortran 77... (cached) yes checking whether gfortran accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... (cached) -fPIC checking if gfortran PIC flag -fPIC works... (cached) yes checking if gfortran static flag -static works... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... (cached) /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... (cached) mpicc checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 *********************** INVERSION SYM. *********************** checking for sqrt in -lm... (cached) yes checking how to get verbose linking output from gfortran... (cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... (cached) none checking for Fortran 77 name-mangling scheme... (cached) lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... (cached) yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... (cached) no checking for ATL_xerbla in -latlas... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for dgemm_ in -ldgemm... (cached) no checking for sgemm_ in -lmkl... (cached) no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... (cached) no checking for sgemm_ in -ldxml... (cached) no checking for sgemm_ in -lscs... (cached) no checking for sgemm_ in -lcomplib.sgimath... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... (cached) no checking for cheev_ in -llapack... (cached) yes checking for mpicc... (cached) mpicc checking for MPI_Init... (cached) yes checking for mpi.h... yes checking for fftw_mpi_execute_dft in -lfftw3_mpi... (cached) yes checking for mpirun... (cached) mpirun checking for deflate in -lz... (cached) yes checking for H5Pcreate in -lhdf5... (cached) yes checking for hdf5.h... (cached) yes checking for H5Pset_mpi... (cached) no checking for H5Pset_fapl_mpio... (cached) yes checking for guile... (cached) yes checking for guile-config... (cached) guile-config checking if linking to guile works... yes checking for libguile.h... (cached) yes checking for guile/gh.h... (cached) no checking for scm_make_smob_type... (cached) yes checking for scm_array_get_handle... (cached) yes checking for scm_is_array... (cached) yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... (cached) gen-ctl-io checking for ctl_get_vector3 in -lctl... (cached) yes checking for ctl.h... (cached) yes checking whether libctl version is at least 4.0.0... checking how to run the C preprocessor... (cached) mpicc -E ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... (cached) yes checking for ctlgeom.h... (cached) yes checking for nlopt.h... (cached) no checking for nlopt_minimize in -lnlopt... (cached) no checking for egrep... (cached) /usr/bin/grep -E checking for unistd.h... (cached) yes checking for getopt.h... (cached) yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... (cached) yes checking for inline... (cached) inline checking for getopt... (cached) yes checking for strncmp... (cached) yes checking whether calling BLAS zdotc works... yes checking for bash... (cached) /bin/bash checking for feenableexcept... (cached) yes checking whether feenableexcept declaration is usable... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build make -j4 make[2]: Entering directory '/<>' make all-recursive make[3]: Entering directory '/<>' Making all in src make[4]: Entering directory '/<>/src' cp -f mpbconf.h mpbi_mpi.h make all-recursive make[5]: Entering directory '/<>/src' Making all in util make[6]: Entering directory '/<>/src/util' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT sphere-quad.o -MD -MP -MF .deps/sphere-quad.Tpo -c -o sphere-quad.o sphere-quad.c mv -f .deps/sphere-quad.Tpo .deps/sphere-quad.Po /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../../src/util/sphere_quad) > sphere-quad.h make all-am make[7]: Entering directory '/<>/src/util' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c -o debug_malloc.lo debug_malloc.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c -o mpi_utils.lo mpi_utils.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c -o verbosity.lo verbosity.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c verbosity.c -o verbosity.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c debug_malloc.c -o debug_malloc.o mv -f .deps/verbosity.Tpo .deps/verbosity.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c mpi_utils.c -o mpi_utils.o mv -f .deps/debug_malloc.Tpo .deps/debug_malloc.Plo mpi_utils.c: In function ‘mpi_one_printf’: mpi_utils.c:139:10: warning: ignoring return value of ‘vasprintf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 139 | vasprintf(&s, template, ap); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mv -f .deps/mpi_utils.Tpo .deps/mpi_utils.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libutil.la debug_malloc.lo mpi_utils.lo verbosity.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libutil.a debug_malloc.o mpi_utils.o verbosity.o libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' Making all in matrices make[6]: Entering directory '/<>/src/matrices' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c -o libmatrices_la-blasglue.lo `test -f 'blasglue.c' || echo './'`blasglue.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c -o libmatrices_la-eigensolver.lo `test -f 'eigensolver.c' || echo './'`eigensolver.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c -o libmatrices_la-eigensolver_davidson.lo `test -f 'eigensolver_davidson.c' || echo './'`eigensolver_davidson.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c -o libmatrices_la-eigensolver_utils.lo `test -f 'eigensolver_utils.c' || echo './'`eigensolver_utils.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c blasglue.c -o libmatrices_la-blasglue.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c eigensolver_davidson.c -o libmatrices_la-eigensolver_davidson.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c eigensolver.c -o libmatrices_la-eigensolver.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c eigensolver_utils.c -o libmatrices_la-eigensolver_utils.o mv -f .deps/libmatrices_la-eigensolver_utils.Tpo .deps/libmatrices_la-eigensolver_utils.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c -o libmatrices_la-evectmatrix.lo `test -f 'evectmatrix.c' || echo './'`evectmatrix.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c evectmatrix.c -o libmatrices_la-evectmatrix.o mv -f .deps/libmatrices_la-blasglue.Tpo .deps/libmatrices_la-blasglue.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c -o libmatrices_la-linmin.lo `test -f 'linmin.c' || echo './'`linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c linmin.c -o libmatrices_la-linmin.o mv -f .deps/libmatrices_la-eigensolver_davidson.Tpo .deps/libmatrices_la-eigensolver_davidson.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c -o libmatrices_la-matrices.lo `test -f 'matrices.c' || echo './'`matrices.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c matrices.c -o libmatrices_la-matrices.o mv -f .deps/libmatrices_la-linmin.Tpo .deps/libmatrices_la-linmin.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c -o libmatrices_la-minpack2-linmin.lo `test -f 'minpack2-linmin.c' || echo './'`minpack2-linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c minpack2-linmin.c -o libmatrices_la-minpack2-linmin.o mv -f .deps/libmatrices_la-evectmatrix.Tpo .deps/libmatrices_la-evectmatrix.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c -o libmatrices_la-sqmatrix.lo `test -f 'sqmatrix.c' || echo './'`sqmatrix.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c sqmatrix.c -o libmatrices_la-sqmatrix.o mv -f .deps/libmatrices_la-matrices.Tpo .deps/libmatrices_la-matrices.Plo mv -f .deps/libmatrices_la-minpack2-linmin.Tpo .deps/libmatrices_la-minpack2-linmin.Plo mv -f .deps/libmatrices_la-sqmatrix.Tpo .deps/libmatrices_la-sqmatrix.Plo mv -f .deps/libmatrices_la-eigensolver.Tpo .deps/libmatrices_la-eigensolver.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmatrices.la libmatrices_la-blasglue.lo libmatrices_la-eigensolver.lo libmatrices_la-eigensolver_davidson.lo libmatrices_la-eigensolver_utils.lo libmatrices_la-evectmatrix.lo libmatrices_la-linmin.lo libmatrices_la-matrices.lo libmatrices_la-minpack2-linmin.lo libmatrices_la-sqmatrix.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmatrices.a libmatrices_la-blasglue.o libmatrices_la-eigensolver.o libmatrices_la-eigensolver_davidson.o libmatrices_la-eigensolver_utils.o libmatrices_la-evectmatrix.o libmatrices_la-linmin.o libmatrices_la-matrices.o libmatrices_la-minpack2-linmin.o libmatrices_la-sqmatrix.o libtool: link: ranlib .libs/libmatrices.a libtool: link: ( cd ".libs" && rm -f "libmatrices.la" && ln -s "../libmatrices.la" "libmatrices.la" ) make[6]: Leaving directory '/<>/src/matrices' Making all in matrixio make[6]: Entering directory '/<>/src/matrixio' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-evectmatrixio.o -MD -MP -MF .deps/libmatrixio_a-evectmatrixio.Tpo -c -o libmatrixio_a-evectmatrixio.o `test -f 'evectmatrixio.c' || echo './'`evectmatrixio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-fieldio.o -MD -MP -MF .deps/libmatrixio_a-fieldio.Tpo -c -o libmatrixio_a-fieldio.o `test -f 'fieldio.c' || echo './'`fieldio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-matrixio.o -MD -MP -MF .deps/libmatrixio_a-matrixio.Tpo -c -o libmatrixio_a-matrixio.o `test -f 'matrixio.c' || echo './'`matrixio.c matrixio.c: In function ‘matrixio_open_’: matrixio.c:405:91: warning: statement with no effect [-Wunused-value] 405 | IF_EXCLUSIVE(if (parallel) mpi_begin_critical_section(matrixio_critical_section_tag),0); | ^ matrixio.c:56:32: note: in definition of macro ‘IF_EXCLUSIVE’ 56 | # define IF_EXCLUSIVE(yes,no) no | ^~ matrixio.c: In function ‘matrixio_close’: matrixio.c:432:94: warning: statement with no effect [-Wunused-value] 432 | IF_EXCLUSIVE(if (id.parallel) mpi_end_critical_section(matrixio_critical_section_tag++),0); | ^ matrixio.c:56:32: note: in definition of macro ‘IF_EXCLUSIVE’ 56 | # define IF_EXCLUSIVE(yes,no) no | ^~ In file included from matrixio.c:29: matrixio.c: In function ‘matrixio_open_dataset’: matrixio.c:516:30: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 516 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ matrixio.c: In function ‘matrixio_read_real_data’: matrixio.c:837:35: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 837 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fieldio.c:41:46: warning: argument 8 of type ‘const real *’ {aka ‘const double *’} declared as a pointer [-Warray-parameter=] 41 | const real *kvector, | ~~~~~~~~~~~~^~~~~~~ In file included from fieldio.c:28: matrixio.h:95:52: note: previously declared as an array ‘const real[3]’ {aka ‘const double[3]’} 95 | const real kvector[3], | ~~~~~~~~~~~^~~~~~~~~~ mv -f .deps/libmatrixio_a-evectmatrixio.Tpo .deps/libmatrixio_a-evectmatrixio.Po mv -f .deps/libmatrixio_a-fieldio.Tpo .deps/libmatrixio_a-fieldio.Po mv -f .deps/libmatrixio_a-matrixio.Tpo .deps/libmatrixio_a-matrixio.Po rm -f libmatrixio.a ar cru libmatrixio.a libmatrixio_a-evectmatrixio.o libmatrixio_a-fieldio.o libmatrixio_a-matrixio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmatrixio.a make[6]: Leaving directory '/<>/src/matrixio' Making all in maxwell make[6]: Entering directory '/<>/src/maxwell' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c -o libmaxwell_la-maxwell.lo `test -f 'maxwell.c' || echo './'`maxwell.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c -o libmaxwell_la-maxwell_constraints.lo `test -f 'maxwell_constraints.c' || echo './'`maxwell_constraints.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c -o libmaxwell_la-maxwell_eps.lo `test -f 'maxwell_eps.c' || echo './'`maxwell_eps.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c -o libmaxwell_la-maxwell_op.lo `test -f 'maxwell_op.c' || echo './'`maxwell_op.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c maxwell_eps.c -o libmaxwell_la-maxwell_eps.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c maxwell_constraints.c -o libmaxwell_la-maxwell_constraints.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c maxwell_op.c -o libmaxwell_la-maxwell_op.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c maxwell.c -o libmaxwell_la-maxwell.o In file included from maxwell_eps.c:29: maxwell_eps.c: In function ‘set_maxwell_dielectric’: xyz_loop.h:54:28: warning: unused variable ‘n2’ [-Wunused-variable] 54 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ | ^~ maxwell_eps.c:421:6: note: in expansion of macro ‘LOOP_XYZ’ 421 | LOOP_XYZ(md) { | ^~~~~~~~ maxwell_eps.c:404:27: warning: unused variable ‘rank’ [-Wunused-variable] 404 | int n_other, n_last, rank; | ^~~~ maxwell_eps.c:404:19: warning: unused variable ‘n_last’ [-Wunused-variable] 404 | int n_other, n_last, rank; | ^~~~~~ maxwell_eps.c:404:10: warning: unused variable ‘n_other’ [-Wunused-variable] 404 | int n_other, n_last, rank; | ^~~~~~~ maxwell_eps.c:401:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 401 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ maxwell_eps.c:401:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 401 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ maxwell_eps.c:401:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 401 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ maxwell_eps.c:395:16: warning: unused variable ‘k’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:13: warning: unused variable ‘j’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:10: warning: unused variable ‘i’ [-Wunused-variable] 395 | int i, j, k; | ^ At top level: maxwell_eps.c:181:12: warning: ‘sym_matrix_eq’ defined but not used [-Wunused-function] 181 | static int sym_matrix_eq(symmetric_matrix V1, symmetric_matrix V2, double tol) | ^~~~~~~~~~~~~ maxwell_op.c: In function ‘project_c2t’: maxwell_op.c:51:54: warning: unused variable ‘az_i’ [-Wunused-variable] 51 | real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); | ^~~~ maxwell_op.c:51:32: warning: unused variable ‘ay_i’ [-Wunused-variable] 51 | real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); | ^~~~ maxwell_op.c:51:10: warning: unused variable ‘ax_i’ [-Wunused-variable] 51 | real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); | ^~~~ mv -f .deps/libmaxwell_la-maxwell.Tpo .deps/libmaxwell_la-maxwell.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c -o libmaxwell_la-maxwell_pre.lo `test -f 'maxwell_pre.c' || echo './'`maxwell_pre.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c maxwell_pre.c -o libmaxwell_la-maxwell_pre.o mv -f .deps/libmaxwell_la-maxwell_constraints.Tpo .deps/libmaxwell_la-maxwell_constraints.Plo mv -f .deps/libmaxwell_la-maxwell_eps.Tpo .deps/libmaxwell_la-maxwell_eps.Plo mv -f .deps/libmaxwell_la-maxwell_pre.Tpo .deps/libmaxwell_la-maxwell_pre.Plo mv -f .deps/libmaxwell_la-maxwell_op.Tpo .deps/libmaxwell_la-maxwell_op.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmaxwell.la libmaxwell_la-maxwell.lo libmaxwell_la-maxwell_constraints.lo libmaxwell_la-maxwell_eps.lo libmaxwell_la-maxwell_op.lo libmaxwell_la-maxwell_pre.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmaxwell.a libmaxwell_la-maxwell.o libmaxwell_la-maxwell_constraints.o libmaxwell_la-maxwell_eps.o libmaxwell_la-maxwell_op.o libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmaxwell.a libtool: link: ( cd ".libs" && rm -f "libmaxwell.la" && ln -s "../libmaxwell.la" "libmaxwell.la" ) make[6]: Leaving directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -no-undefined -version-info 5:1:4 -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmpbi_mpi.la -rpath /usr/lib util/libutil.la matrices/libmatrices.la maxwell/libmaxwell.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: (cd .libs/libmpbi_mpi.lax/libutil.a && ar x "/<>/src/util/.libs/libutil.a") libtool: link: (cd .libs/libmpbi_mpi.lax/libmatrices.a && ar x "/<>/src/matrices/.libs/libmatrices.a") libtool: link: (cd .libs/libmpbi_mpi.lax/libmaxwell.a && ar x "/<>/src/maxwell/.libs/libmaxwell.a") libtool: link: ar cr .libs/libmpbi_mpi.a .libs/libmpbi_mpi.lax/libutil.a/debug_malloc.o .libs/libmpbi_mpi.lax/libutil.a/mpi_utils.o .libs/libmpbi_mpi.lax/libutil.a/verbosity.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-blasglue.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-eigensolver.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-eigensolver_davidson.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-eigensolver_utils.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-evectmatrix.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-linmin.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-matrices.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-minpack2-linmin.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-sqmatrix.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_constraints.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_eps.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_op.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmpbi_mpi.a libtool: link: rm -fr .libs/libmpbi_mpi.lax libtool: link: ( cd ".libs" && rm -f "libmpbi_mpi.la" && ln -s "../libmpbi_mpi.la" "libmpbi_mpi.la" ) make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' Making all in tests make[4]: Entering directory '/<>/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT malloctest.o -MD -MP -MF .deps/malloctest.Tpo -c -o malloctest.o malloctest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT blastest.o -MD -MP -MF .deps/blastest.Tpo -c -o blastest.o blastest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT eigs_test.o -MD -MP -MF .deps/eigs_test.Tpo -c -o eigs_test.o eigs_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT maxwell_test.o -MD -MP -MF .deps/maxwell_test.Tpo -c -o maxwell_test.o maxwell_test.c eigs_test.c: In function ‘Aop’: eigs_test.c:293:51: warning: unused parameter ‘data’ [-Wunused-parameter] 293 | void Aop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:294:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:294:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Bop’: eigs_test.c:303:51: warning: unused parameter ‘data’ [-Wunused-parameter] 303 | void Bop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:304:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:304:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Ainvop’: eigs_test.c:313:54: warning: unused parameter ‘data’ [-Wunused-parameter] 313 | void Ainvop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:314:25: warning: unused parameter ‘Y’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:314:34: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c:314:54: warning: unused parameter ‘YtY’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~^~~ eigs_test.c: In function ‘Cop_old’: eigs_test.c:324:55: warning: unused parameter ‘data’ [-Wunused-parameter] 324 | void Cop_old(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:325:22: warning: unused parameter ‘Y’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:325:31: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c: In function ‘Cop’: eigs_test.c:349:51: warning: unused parameter ‘data’ [-Wunused-parameter] 349 | void Cop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:350:23: warning: unused parameter ‘Y’ [-Wunused-parameter] 350 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ mv -f .deps/malloctest.Tpo .deps/malloctest.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT normal_vectors-normal_vectors.o -MD -MP -MF .deps/normal_vectors-normal_vectors.Tpo -c -o normal_vectors-normal_vectors.o `test -f 'normal_vectors.c' || echo './'`normal_vectors.c mv -f .deps/blastest.Tpo .deps/blastest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/normal_vectors-normal_vectors.Tpo .deps/normal_vectors-normal_vectors.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/maxwell_test.Tpo .deps/maxwell_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/eigs_test.Tpo .deps/eigs_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/<>/tests' Making all in mpb make[4]: Entering directory '/<>/mpb' cp -f /usr/share/libctl/base/main.c main.c cp -f /usr/share/libctl/utils/geom.c geom.c gen-ctl-io --header -o ctl-io.h mpb.scm /usr/share/libctl gen-ctl-io --code -o ctl-io.c mpb.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" make all-am make[5]: Entering directory '/<>/mpb' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-medium.o -MD -MP -MF .deps/mpbi_mpi-medium.Tpo -c -o mpbi_mpi-medium.o `test -f 'medium.c' || echo './'`medium.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-epsilon_file.o -MD -MP -MF .deps/mpbi_mpi-epsilon_file.Tpo -c -o mpbi_mpi-epsilon_file.o `test -f 'epsilon_file.c' || echo './'`epsilon_file.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-field-smob.o -MD -MP -MF .deps/mpbi_mpi-field-smob.Tpo -c -o mpbi_mpi-field-smob.o `test -f 'field-smob.c' || echo './'`field-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-fields.o -MD -MP -MF .deps/mpbi_mpi-fields.Tpo -c -o mpbi_mpi-fields.o `test -f 'fields.c' || echo './'`fields.c field-smob.c: In function ‘update_curfield_smob’: field-smob.c:142:10: warning: implicit declaration of function ‘strchr’ [-Wimplicit-function-declaration] 142 | if (strchr("dhbecv", curfield_type)) { /* complex vector field */ | ^~~~~~ field-smob.c:30:1: note: include ‘’ or provide a declaration of ‘strchr’ 29 | #include "mpb.h" +++ |+#include 30 | field-smob.c:142:10: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 142 | if (strchr("dhbecv", curfield_type)) { /* complex vector field */ | ^~~~~~ field-smob.c:142:10: note: include ‘’ or provide a declaration of ‘strchr’ field-smob.c: In function ‘cur_fieldp’: field-smob.c:176:22: warning: implicit declaration of function ‘strcmp’ [-Wimplicit-function-declaration] 176 | int ret = !strcmp(s, "cur-field"); | ^~~~~~ field-smob.c:176:22: note: include ‘’ or provide a declaration of ‘strcmp’ field-smob.c: In function ‘integrate_fieldL’: field-smob.c:407:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ field-smob.c:407:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ field-smob.c:407:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c: In function ‘compute_field_energy’: fields.c:317:24: warning: implicit declaration of function ‘strchr’ [-Wimplicit-function-declaration] 317 | if (!curfield || !strchr("dhb", curfield_type)) { | ^~~~~~ fields.c:37:1: note: include ‘’ or provide a declaration of ‘strchr’ 36 | #include "field-smob.h" +++ |+#include 37 | fields.c:317:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 317 | if (!curfield || !strchr("dhb", curfield_type)) { | ^~~~~~ fields.c:317:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘compute_field_squared’: fields.c:358:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 358 | if (!curfield || !strchr("dhbecv", curfield_type)) { | ^~~~~~ fields.c:358:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘compute_field_divergence’: fields.c:379:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 379 | if (!curfield || !strchr("dhbec", curfield_type)) { | ^~~~~~ fields.c:379:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘fix_field_phase’: fields.c:449:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 449 | if (!curfield || !strchr("dhbecv", curfield_type)) { | ^~~~~~ fields.c:449:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:446:13: warning: unused variable ‘theta’ [-Wunused-variable] 446 | double theta; | ^~~~~ fields.c:444:31: warning: unused variable ‘sq_sum’ [-Wunused-variable] 444 | real sq_sum2[2] = {0,0}, sq_sum[2], maxabs = 0.0; | ^~~~~~ fields.c:444:11: warning: unused variable ‘sq_sum2’ [-Wunused-variable] 444 | real sq_sum2[2] = {0,0}, sq_sum[2], maxabs = 0.0; | ^~~~~~~ In file included from fields.c:25: fields.c: In function ‘get_energy_point’: fields.c:704:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 704 | CHECK(curfield && strchr("DHBR", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:704:24: note: include ‘’ or provide a declaration of ‘strchr’ 704 | CHECK(curfield && strchr("DHBR", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_bloch_field_point’: fields.c:714:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 714 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:714:24: note: include ‘’ or provide a declaration of ‘strchr’ 714 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_field_point’: fields.c:730:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 730 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:730:24: note: include ‘’ or provide a declaration of ‘strchr’ 730 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_bloch_cscalar_point’: fields.c:755:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 755 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:755:24: note: include ‘’ or provide a declaration of ‘strchr’ 755 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_cscalar_point’: fields.c:765:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 765 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:765:24: note: include ‘’ or provide a declaration of ‘strchr’ 765 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘compute_energy_in_dielectric’: fields.c:877:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 877 | if (!curfield || !strchr("DHBR", curfield_type)) { | ^~~~~~ fields.c:877:24: note: include ‘’ or provide a declaration of ‘strchr’ In file included from fields.c:25: fields.c: In function ‘fix_fname’: fields.c:927:26: warning: implicit declaration of function ‘strlen’ [-Wimplicit-function-declaration] 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:927:26: note: include ‘’ or provide a declaration of ‘strlen’ 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:927:26: warning: incompatible implicit declaration of built-in function ‘strlen’ [-Wbuiltin-declaration-mismatch] 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:927:26: note: include ‘’ or provide a declaration of ‘strlen’ 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:929:6: warning: implicit declaration of function ‘strcpy’ [-Wimplicit-function-declaration] 929 | strcpy(s, prefix ? prefix : ""); | ^~~~~~ fields.c:929:6: note: include ‘’ or provide a declaration of ‘strcpy’ fields.c:929:6: warning: incompatible implicit declaration of built-in function ‘strcpy’ [-Wbuiltin-declaration-mismatch] fields.c:929:6: note: include ‘’ or provide a declaration of ‘strcpy’ fields.c:930:6: warning: implicit declaration of function ‘strcat’ [-Wimplicit-function-declaration] 930 | strcat(s, fname ? fname : ""); | ^~~~~~ fields.c:930:6: note: include ‘’ or provide a declaration of ‘strcat’ fields.c:930:6: warning: incompatible implicit declaration of built-in function ‘strcat’ [-Wbuiltin-declaration-mismatch] fields.c:930:6: note: include ‘’ or provide a declaration of ‘strcat’ fields.c: In function ‘output_field_to_file’: fields.c:1100:10: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1100 | if (strchr("Rv", curfield_type)) /* generic scalar/vector field */ | ^~~~~~ fields.c:1100:10: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1103:10: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1103 | if (strchr("dhbecv", curfield_type)) { /* outputting vector field */ | ^~~~~~ fields.c:1103:10: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1112:16: warning: incompatible implicit declaration of built-in function ‘strcat’ [-Wbuiltin-declaration-mismatch] 1112 | strcat(fname, comp_str); | ^~~~~~ fields.c:1112:16: note: include ‘’ or provide a declaration of ‘strcat’ fields.c: In function ‘compute_energy_in_object_list’: fields.c:1317:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1317 | if (!curfield || !strchr("DHBR", curfield_type)) { | ^~~~~~ fields.c:1317:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1322:6: warning: ‘geom_fix_objects0’ is deprecated [-Wdeprecated-declarations] 1322 | geom_fix_objects0(objects); | ^~~~~~~~~~~~~~~~~ In file included from fields.c:33: /usr/include/ctlgeom.h:65:13: note: declared here 65 | extern void geom_fix_objects0(GEOMETRIC_OBJECT_LIST geometry) CTLGEOM_DEPRECATED; | ^~~~~~~~~~~~~~~~~ In file included from fields.c:30: ../src/maxwell/xyz_loop.h:54:28: warning: unused variable ‘n2’ [-Wunused-variable] 54 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ | ^~ fields.c:1337:6: note: in expansion of macro ‘LOOP_XYZ’ 1337 | LOOP_XYZ(mdata) { | ^~~~~~~~ fields.c:1311:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 1311 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1311:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 1311 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ fields.c:1311:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 1311 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1309:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1309:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1309:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1309:10: warning: unused variable ‘i’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_field_integral’: fields.c:1387:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1387 | if (!curfield || !strchr("dhbeDHBRcv", curfield_type)) { | ^~~~~~ fields.c:1387:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1394:25: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1394 | integrate_energy = strchr("DHBR", curfield_type) != NULL; | ^~~~~~ fields.c:1394:25: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1379:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 1379 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1379:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 1379 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ fields.c:1379:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 1379 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1377:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1377:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1377:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1377:10: warning: unused variable ‘i’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_energy_integral’: fields.c:1531:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1531 | if (!curfield || !strchr("DHBR", curfield_type)) { | ^~~~~~ fields.c:1531:24: note: include ‘’ or provide a declaration of ‘strchr’ mv -f .deps/mpbi_mpi-epsilon_file.Tpo .deps/mpbi_mpi-epsilon_file.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-material_grid.o -MD -MP -MF .deps/mpbi_mpi-material_grid.Tpo -c -o mpbi_mpi-material_grid.o `test -f 'material_grid.c' || echo './'`material_grid.c In file included from medium.c:76: mu.c: In function ‘mean_mu_func’: mu.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ mu.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ material_grid.c: In function ‘material_grids_addgradient’: material_grid.c:392:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 392 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ material_grid.c:392:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 392 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ material_grid.c:392:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 392 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ material_grid.c:390:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:390:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:390:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ material_grid.c:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: In function ‘print_material_grids_deps_du’: material_grid.c:545:16: warning: implicit declaration of function ‘memset’ [-Wimplicit-function-declaration] 545 | memset(v, 0, sizeof(double) * ntot); | ^~~~~~ material_grid.c:30:1: note: include ‘’ or provide a declaration of ‘memset’ 29 | #include "mpb.h" +++ |+#include 30 | material_grid.c:545:16: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 545 | memset(v, 0, sizeof(double) * ntot); | ^~~~~~ material_grid.c:545:16: note: include ‘’ or provide a declaration of ‘memset’ material_grid.c: In function ‘print_material_grids_deps_du_numeric’: material_grid.c:634:14: warning: unused variable ‘foo’ [-Wunused-variable] 634 | double *foo; | ^~~ material_grid.c: In function ‘match_eps_func’: material_grid.c:824:16: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 824 | if (grad) memset(work, 0, sizeof(double) * n); | ^~~~~~ material_grid.c:824:16: note: include ‘’ or provide a declaration of ‘memset’ material_grid.c:816:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:816:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:816:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ At top level: material_grid.c:807:15: warning: ‘match_eps_func’ defined but not used [-Wunused-function] 807 | static double match_eps_func(int n, const double *u, double *grad, void *data) | ^~~~~~~~~~~~~~ In file included from medium.c:75: epsilon.c: In function ‘mean_epsilon_func’: epsilon.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ epsilon.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ mv -f .deps/mpbi_mpi-field-smob.Tpo .deps/mpbi_mpi-field-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-material_grid_opt.o -MD -MP -MF .deps/mpbi_mpi-material_grid_opt.Tpo -c -o mpbi_mpi-material_grid_opt.o `test -f 'material_grid_opt.c' || echo './'`material_grid_opt.c material_grid_opt.c: In function ‘mindiff_func’: material_grid_opt.c:59:15: warning: implicit declaration of function ‘memset’ [-Wimplicit-function-declaration] 59 | if (grad) memset(work, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:30:1: note: include ‘’ or provide a declaration of ‘memset’ 29 | #include "mpb.h" +++ |+#include 30 | material_grid_opt.c:59:15: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 59 | if (grad) memset(work, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:59:15: note: include ‘’ or provide a declaration of ‘memset’ material_grid_opt.c: In function ‘material_grids_min_tetm_gap’: material_grid_opt.c:90:43: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 90 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:91:44: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:91:60: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ material_grid_opt.c: In function ‘band_constraint’: material_grid_opt.c:191:16: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 191 | if (grad) memset(work, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:191:16: note: include ‘’ or provide a declaration of ‘memset’ material_grid_opt.c: In function ‘maxgap_func’: material_grid_opt.c:232:11: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 232 | memset(grad, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:232:11: note: include ‘’ or provide a declaration of ‘memset’ material_grid_opt.c: In function ‘material_grids_maxmin_gap’: material_grid_opt.c:258:48: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 258 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:259:49: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:259:65: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ material_grid.c: In function ‘material_grids_addgradient’: material_grid.c:390:13: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:16: warning: ‘k’ may be used uninitialized [-Wmaybe-uninitialized] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ mv -f .deps/mpbi_mpi-material_grid_opt.Tpo .deps/mpbi_mpi-material_grid_opt.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-matrix-smob.o -MD -MP -MF .deps/mpbi_mpi-matrix-smob.Tpo -c -o mpbi_mpi-matrix-smob.o `test -f 'matrix-smob.c' || echo './'`matrix-smob.c fields.c: In function ‘compute_energy_in_object_list’: fields.c:1309:13: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1309:16: warning: ‘k’ may be used uninitialized [-Wmaybe-uninitialized] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ mv -f .deps/mpbi_mpi-medium.Tpo .deps/mpbi_mpi-medium.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-mpb.o -MD -MP -MF .deps/mpbi_mpi-mpb.Tpo -c -o mpbi_mpi-mpb.o `test -f 'mpb.c' || echo './'`mpb.c fields.c: In function ‘compute_field_integral’: fields.c:1377:13: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:16: warning: ‘k’ may be used uninitialized [-Wmaybe-uninitialized] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ mv -f .deps/mpbi_mpi-material_grid.Tpo .deps/mpbi_mpi-material_grid.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-main.o -MD -MP -MF .deps/mpbi_mpi-main.Tpo -c -o mpbi_mpi-main.o `test -f 'main.c' || echo './'`main.c mv -f .deps/mpbi_mpi-fields.Tpo .deps/mpbi_mpi-fields.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-geom.o -MD -MP -MF .deps/mpbi_mpi-geom.Tpo -c -o mpbi_mpi-geom.o `test -f 'geom.c' || echo './'`geom.c mv -f .deps/mpbi_mpi-matrix-smob.Tpo .deps/mpbi_mpi-matrix-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-ctl-io.o -MD -MP -MF .deps/mpbi_mpi-ctl-io.Tpo -c -o mpbi_mpi-ctl-io.o `test -f 'ctl-io.c' || echo './'`ctl-io.c In file included from ctl-io.h:7, from main.c:37: main.c: In function ‘main_entry’: main.c:194:31: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 194 | gh_new_procedure("subplex", (SCM(*)(void))subplex_scm, 7, 0, 0); | ^ main.c:202:44: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 202 | gh_new_procedure("adaptive-integration", (SCM(*)(void))adaptive_integration_scm, 6, 0, 0); | ^ main.c:205:45: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^ geom.c: In function ‘overlap_integrand’: geom.c:1156:10: warning: unused variable ‘s’ [-Wunused-variable] 1156 | double s[2]; | ^ geom.c: In function ‘point_in_or_on_prism’: geom.c:2110:10: warning: unused variable ‘height’ [-Wunused-variable] 2110 | double height = prsm->height; | ^~~~~~ geom.c: In function ‘dcmp’: geom.c:2137:17: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c:2137:40: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c: In function ‘normal_to_prism’: geom.c:2357:11: warning: unused variable ‘axisp’ [-Wunused-variable] 2357 | vector3 axisp = vector3_scale(height, zhatp); | ^~~~~ geom.c: In function ‘triangle_normal’: geom.c:2548:10: warning: unused variable ‘nvnorm’ [-Wunused-variable] 2548 | double nvnorm = vector3_norm(nv); | ^~~~~~ ctl-io.c: In function ‘block_equal’: ctl-io.c:639:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 639 | else ; | ^ ctl-io.c: In function ‘cylinder_equal’: ctl-io.c:679:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 679 | else ; | ^ ctl-io.c: In function ‘geometric_object_equal’: ctl-io.c:716:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 716 | else ; | ^ ctl-io.c: In function ‘material_type_equal’: ctl-io.c:776:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 776 | else ; | ^ ctl-io.c: In function ‘lattice_destroy’: ctl-io.c:782:30: warning: unused parameter ‘o’ [-Wunused-parameter] 782 | void lattice_destroy(lattice o) | ~~~~~~~~^ ctl-io.c: In function ‘ellipsoid_destroy’: ctl-io.c:786:34: warning: unused parameter ‘o’ [-Wunused-parameter] 786 | void ellipsoid_destroy(ellipsoid o) | ~~~~~~~~~~^ ctl-io.c: In function ‘sphere_destroy’: ctl-io.c:845:28: warning: unused parameter ‘o’ [-Wunused-parameter] 845 | void sphere_destroy(sphere o) | ~~~~~~~^ ctl-io.c: In function ‘wedge_destroy’: ctl-io.c:849:26: warning: unused parameter ‘o’ [-Wunused-parameter] 849 | void wedge_destroy(wedge o) | ~~~~~~^ ctl-io.c: In function ‘cone_destroy’: ctl-io.c:853:24: warning: unused parameter ‘o’ [-Wunused-parameter] 853 | void cone_destroy(cone o) | ~~~~~^ ctl-io.c: In function ‘material_grid_destroy’: ctl-io.c:907:42: warning: unused parameter ‘o’ [-Wunused-parameter] 907 | void material_grid_destroy(material_grid o) | ~~~~~~~~~~~~~~^ ctl-io.c: In function ‘material_function_destroy’: ctl-io.c:911:50: warning: unused parameter ‘o’ [-Wunused-parameter] 911 | void material_function_destroy(material_function o) | ~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_anisotropic_destroy’: ctl-io.c:915:52: warning: unused parameter ‘o’ [-Wunused-parameter] 915 | void medium_anisotropic_destroy(medium_anisotropic o) | ~~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_destroy’: ctl-io.c:919:28: warning: unused parameter ‘o’ [-Wunused-parameter] 919 | void medium_destroy(medium o) | ~~~~~~~^ mv -f .deps/mpbi_mpi-main.Tpo .deps/mpbi_mpi-main.Po mv -f .deps/mpbi_mpi-mpb.Tpo .deps/mpbi_mpi-mpb.Po mv -f .deps/mpbi_mpi-ctl-io.Tpo .deps/mpbi_mpi-ctl-io.Po mv -f .deps/mpbi_mpi-geom.Tpo .deps/mpbi_mpi-geom.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpbi_mpi mpbi_mpi-medium.o mpbi_mpi-epsilon_file.o mpbi_mpi-field-smob.o mpbi_mpi-fields.o mpbi_mpi-material_grid.o mpbi_mpi-material_grid_opt.o mpbi_mpi-matrix-smob.o mpbi_mpi-mpb.o mpbi_mpi-main.o mpbi_mpi-geom.o mpbi_mpi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/libmpbi_mpi.la -lctl -lguile-3.0 -lgc -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpbi_mpi mpbi_mpi-medium.o mpbi_mpi-epsilon_file.o mpbi_mpi-field-smob.o mpbi_mpi-fields.o mpbi_mpi-material_grid.o mpbi_mpi-material_grid_opt.o mpbi_mpi-matrix-smob.o mpbi_mpi-mpb.o mpbi_mpi-main.o mpbi_mpi-geom.o mpbi_mpi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lctl -lguile-3.0 -lgc -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath epsilon.c: In function 'mean_epsilon_func': epsilon.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ epsilon.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ mu.c: In function 'mean_mu_func': mu.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ mu.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ fields.c: In function 'compute_field_integral': fields.c:1377:13: warning: 'j' may be used uninitialized [-Wmaybe-uninitialized] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:16: warning: 'k' may be used uninitialized [-Wmaybe-uninitialized] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: In function 'material_grids_addgradient': material_grid.c:390:13: warning: 'j' may be used uninitialized [-Wmaybe-uninitialized] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:16: warning: 'k' may be used uninitialized [-Wmaybe-uninitialized] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ ctl-io.c: In function 'compute_energy_in_object_list_aux': fields.c:1309:13: warning: 'j' may be used uninitialized [-Wmaybe-uninitialized] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1309:16: warning: 'k' may be used uninitialized [-Wmaybe-uninitialized] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' Making all in examples make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/examples' Making all in utils make[4]: Entering directory '/<>/utils' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/utils' make[4]: Entering directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' echo "Step4: mpi inv version end" Step4: mpi inv version end make install prefix=/<>/debian/build-tmp/mpb-mpi/usr make[2]: Entering directory '/<>' Making install in src make[3]: Entering directory '/<>/src' make install-recursive make[4]: Entering directory '/<>/src' Making install in util make[5]: Entering directory '/<>/src/util' make install-am make[6]: Entering directory '/<>/src/util' make[7]: Entering directory '/<>/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' make[5]: Leaving directory '/<>/src/util' Making install in matrices make[5]: Entering directory '/<>/src/matrices' make[6]: Entering directory '/<>/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrices' make[5]: Leaving directory '/<>/src/matrices' Making install in matrixio make[5]: Entering directory '/<>/src/matrixio' make[6]: Entering directory '/<>/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrixio' make[5]: Leaving directory '/<>/src/matrixio' Making install in maxwell make[5]: Entering directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/maxwell' make[5]: Leaving directory '/<>/src/maxwell' make[5]: Entering directory '/<>/src' make[6]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpbi_mpi.la '/<>/debian/build-tmp/mpb-mpi/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpbi_mpi.lai /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.la libtool: install: /usr/bin/install -c .libs/libmpbi_mpi.a /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.a libtool: install: chmod 644 /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.a libtool: install: ranlib /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/include' /usr/bin/install -c -m 644 mpbi_mpi.h '/<>/debian/build-tmp/mpb-mpi/usr/include' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h util/verbosity.h '/<>/debian/build-tmp/mpb-mpi/usr/include/mpb' make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making install in tests make[3]: Entering directory '/<>/tests' make[4]: Entering directory '/<>/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/tests' make[3]: Leaving directory '/<>/tests' Making install in mpb make[3]: Entering directory '/<>/mpb' make install-am make[4]: Entering directory '/<>/mpb' make[5]: Entering directory '/<>/mpb' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpbi_mpi '/<>/debian/build-tmp/mpb-mpi/usr/bin/./mpbi-mpi' libtool: install: /usr/bin/install -c mpbi_mpi /<>/debian/build-tmp/mpb-mpi/usr/bin/./mpbi-mpi /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/<>/debian/build-tmp/mpb-mpi/usr/share/mpb' make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' make[3]: Leaving directory '/<>/mpb' Making install in examples make[3]: Entering directory '/<>/examples' make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/examples' make[3]: Leaving directory '/<>/examples' Making install in utils make[3]: Entering directory '/<>/utils' make[4]: Entering directory '/<>/utils' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' make[4]: Leaving directory '/<>/utils' make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' #make clean <- still needed in dh_auto_install # clear depdenncy_libs in *.la sed -i "/dependency_libs/ s/'.*'/''/" `find /<>/debian/build-tmp/* -name '*.la'` # create mpbi-data.1 cp /<>/debian/build-tmp/mpb/usr/share/man/man1/mpb-data.1 /<>/debian/build-tmp/mpb/usr/share/man/man1/mpbi-data.1 make[1]: Leaving directory '/<>' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' # tests are done during build, so nothing to do here make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/<>' # last build is for inv + mpi dh_auto_install make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/<>' Making install in src make[3]: Entering directory '/<>/src' make install-recursive make[4]: Entering directory '/<>/src' Making install in util make[5]: Entering directory '/<>/src/util' make install-am make[6]: Entering directory '/<>/src/util' make[7]: Entering directory '/<>/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' make[5]: Leaving directory '/<>/src/util' Making install in matrices make[5]: Entering directory '/<>/src/matrices' make[6]: Entering directory '/<>/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrices' make[5]: Leaving directory '/<>/src/matrices' Making install in matrixio make[5]: Entering directory '/<>/src/matrixio' make[6]: Entering directory '/<>/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrixio' make[5]: Leaving directory '/<>/src/matrixio' Making install in maxwell make[5]: Entering directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/maxwell' make[5]: Leaving directory '/<>/src/maxwell' make[5]: Entering directory '/<>/src' make[6]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/tmp/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpbi_mpi.la '/<>/debian/tmp/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpbi_mpi.lai /<>/debian/tmp/usr/lib/libmpbi_mpi.la libtool: install: /usr/bin/install -c .libs/libmpbi_mpi.a /<>/debian/tmp/usr/lib/libmpbi_mpi.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/libmpbi_mpi.a libtool: install: ranlib /<>/debian/tmp/usr/lib/libmpbi_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib' /usr/bin/mkdir -p '/<>/debian/tmp/usr/include' /usr/bin/install -c -m 644 mpbi_mpi.h '/<>/debian/tmp/usr/include' /usr/bin/mkdir -p '/<>/debian/tmp/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h util/verbosity.h '/<>/debian/tmp/usr/include/mpb' make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making install in tests make[3]: Entering directory '/<>/tests' make[4]: Entering directory '/<>/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/tests' make[3]: Leaving directory '/<>/tests' Making install in mpb make[3]: Entering directory '/<>/mpb' make install-am make[4]: Entering directory '/<>/mpb' make[5]: Entering directory '/<>/mpb' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpbi_mpi '/<>/debian/tmp/usr/bin/./mpbi-mpi' libtool: install: /usr/bin/install -c mpbi_mpi /<>/debian/tmp/usr/bin/./mpbi-mpi /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/<>/debian/tmp/usr/share/man/man1' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/<>/debian/tmp/usr/share/mpb' make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' make[3]: Leaving directory '/<>/mpb' Making install in examples make[3]: Entering directory '/<>/examples' make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/examples' make[3]: Leaving directory '/<>/examples' Making install in utils make[3]: Entering directory '/<>/utils' make[4]: Entering directory '/<>/utils' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/<>/debian/tmp/usr/share/man/man1' make[4]: Leaving directory '/<>/utils' make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' rm -f config.cache ../config.cache make[1]: Leaving directory '/<>' dh_install debian/rules override_dh_installdocs make[1]: Entering directory '/<>' dh_installdocs rm -rf debian/mpb-doc/usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/license make[1]: Leaving directory '/<>' dh_installchangelogs debian/rules override_dh_installexamples make[1]: Entering directory '/<>' dh_installexamples rm -f debian/mpb-doc/usr/share/doc/mpb*/examples/Makefile rm -f debian/mpb-doc/usr/share/doc/mpb*/examples/Makefile.gz make[1]: Leaving directory '/<>' dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_missing: warning: usr/bin/mpbi-mpi exists in debian/tmp but is not installed to anywhere (related file: "debian/build-tmp/mpb-mpi/usr/bin/mpbi-mpi") dh_missing: warning: usr/include/mpb/eigensolver.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/mpb/matrices.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/mpb/maxwell.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/mpb/scalar.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/mpb/verbosity.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/mpbi_mpi.h exists in debian/tmp but is not installed to anywhere (related file: "debian/build-tmp/mpb-mpi/usr/include/mpbi_mpi.h") dh_missing: warning: usr/lib/libmpbi_mpi.a exists in debian/tmp but is not installed to anywhere (related file: "debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.a") dh_missing: warning: usr/lib/libmpbi_mpi.la exists in debian/tmp but is not installed to anywhere (related file: "debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.la") dh_missing: warning: usr/share/man/man1/mpb-data.1 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/man/man1/mpb-split.1 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/man/man1/mpb.1 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/mpb/mpb.scm exists in debian/tmp but is not installed to anywhere (related file: "debian/build-tmp/mpb/usr/share/mpb/mpb.scm") While detecting missing files, dh_missing noted some files with a similar name to those that were missing. This warning /might/ be resolved by replacing references to the missing files with the similarly named ones that dh_missing found - assuming the content is identical. As an example, you might want to replace: * debian/build-tmp/mpb-mpi/usr/bin/mpbi-mpi with: * usr/bin/mpbi-mpi in a file in debian/ or as argument to one of the dh_* tools called from debian/rules. (Note it is possible the paths are not used verbatim but instead directories containing or globs matching them are used instead) Alternatively, add the missing file to debian/not-installed if it cannot and should not be used. The following debhelper tools have reported what they installed (with files per package) * dh_install: mpb (11), mpb-dev (5), mpb-doc (4), mpb-mpi (6), mpb-scm (1) * dh_installdocs: mpb (2), mpb-dev (0), mpb-doc (0), mpb-mpi (0), mpb-scm (0) * dh_installexamples: mpb (0), mpb-dev (0), mpb-doc (17), mpb-mpi (0), mpb-scm (0) * dh_installman: mpb (1), mpb-dev (0), mpb-doc (0), mpb-mpi (1), mpb-scm (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. dh_dwz dh_strip debugedit: debian/mpb/usr/bin/mpbi: Unknown DWARF DW_FORM_0x1f20 385dd3708572575713feb0f489310e4bfbe102a9 debugedit: debian/mpb/usr/bin/mpb-data: Unknown DWARF DW_FORM_0x1f21 7955c2a8a81c6175ede71c07d0012e88cfba4542 debugedit: debian/mpb/usr/bin/mpb: Unknown DWARF DW_FORM_0x1f21 8bb5284db3287c5686abe8f66087d7806dff5100 debugedit: debian/mpb/usr/bin/mpbi-data: Unknown DWARF DW_FORM_0x1f21 7955c2a8a81c6175ede71c07d0012e88cfba4542 debugedit: debian/mpb-mpi/usr/bin/mpb-mpi: Unknown DWARF DW_FORM_0x1f20 3b4ba5c49fe1522fdda536f573fc48d801af229e debugedit: debian/mpb-mpi/usr/bin/mpbi-mpi: Unknown DWARF DW_FORM_0x1f21 cd77cab724582e28683e24a2b5c13605a51992e9 dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. INFO: pkgstriptranslations version 148 INFO: pkgstriptranslations version 148 INFO: pkgstriptranslations version 148 INFO: pkgstriptranslations version 148 pkgstriptranslations: processing mpb (in debian/mpb); do_strip: , oemstrip: pkgstriptranslations: processing mpb-scm (in debian/mpb-scm); do_strip: , oemstrip: pkgstriptranslations: processing mpb-doc (in debian/mpb-doc); do_strip: , oemstrip: pkgstriptranslations: processing mpb-mpi (in debian/mpb-mpi); do_strip: , oemstrip: /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgstripfiles: processing control file: debian/mpb/DEBIAN/control, package mpb, directory debian/mpb Skipping arch: any to arch: all dependency to mpb-scm pkgstripfiles: Truncating usr/share/doc/mpb/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package mpb ... pkgstripfiles: No PNG files. dpkg-deb: building package 'mpb' in '../mpb_1.11.1-4_amd64.deb'. pkgstripfiles: processing control file: debian/mpb-scm/DEBIAN/control, package mpb-scm, directory debian/mpb-scm INFO: pkgstripfiles: waiting for lock (mpb-scm) ... pkgstripfiles: processing control file: debian/mpb-mpi/DEBIAN/control, package mpb-mpi, directory debian/mpb-mpi Skipping arch: any to arch: all dependency to mpb-scm pkgstripfiles: Truncating usr/share/doc/mpb-mpi/changelog.Debian.gz to topmost ten records pkgstripfiles: processing control file: debian/mpb-doc/DEBIAN/control, package mpb-doc, directory debian/mpb-doc pkgstripfiles: Running PNG optimization (using 4 cpus) for package mpb-mpi ... INFO: pkgstripfiles: waiting for lock (mpb-doc) ... pkgstripfiles: No PNG files. dpkg-deb: building package 'mpb-mpi' in '../mpb-mpi_1.11.1-4_amd64.deb'. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. INFO: pkgstriptranslations version 148 pkgstriptranslations: processing mpb-mpi-dbgsym (in debian/.debhelper/mpb-mpi/dbgsym-root); do_strip: , oemstrip: INFO: pkgstriptranslations version 148 /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgstriptranslations: processing mpb-dbgsym (in debian/.debhelper/mpb/dbgsym-root); do_strip: , oemstrip: /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgstripfiles: processing control file: debian/.debhelper/mpb-mpi/dbgsym-root/DEBIAN/control, package mpb-mpi-dbgsym, directory debian/.debhelper/mpb-mpi/dbgsym-root dpkg-deb: building package 'mpb-mpi-dbgsym' in 'debian/.debhelper/scratch-space/build-mpb-mpi/mpb-mpi-dbgsym_1.11.1-4_amd64.deb'. INFO: pkgstripfiles: waiting for lock (mpb-scm) ... pkgstripfiles: processing control file: debian/.debhelper/mpb/dbgsym-root/DEBIAN/control, package mpb-dbgsym, directory debian/.debhelper/mpb/dbgsym-root dpkg-deb: building package 'mpb-dbgsym' in 'debian/.debhelper/scratch-space/build-mpb/mpb-dbgsym_1.11.1-4_amd64.deb'. pkgstripfiles: Truncating usr/share/doc/mpb-doc/changelog.Debian.gz to topmost ten records pkgstripfiles: Disabled PNG optimization for -doc package mpb-doc (to save build time) dpkg-deb: building package 'mpb-doc' in '../mpb-doc_1.11.1-4_all.deb'. Renaming mpb-mpi-dbgsym_1.11.1-4_amd64.deb to mpb-mpi-dbgsym_1.11.1-4_amd64.ddeb Renaming mpb-dbgsym_1.11.1-4_amd64.deb to mpb-dbgsym_1.11.1-4_amd64.ddeb /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. INFO: pkgstriptranslations version 148 pkgstriptranslations: processing mpb-dev (in debian/mpb-dev); do_strip: , oemstrip: /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. INFO: pkgstripfiles: waiting for lock (mpb-scm) ... pkgstripfiles: processing control file: debian/mpb-dev/DEBIAN/control, package mpb-dev, directory debian/mpb-dev pkgstripfiles: Truncating usr/share/doc/mpb-dev/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package mpb-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'mpb-dev' in '../mpb-dev_1.11.1-4_amd64.deb'. pkgstripfiles: Truncating usr/share/doc/mpb-scm/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package mpb-scm ... pkgstripfiles: No PNG files. dpkg-deb: building package 'mpb-scm' in '../mpb-scm_1.11.1-4_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../mpb_1.11.1-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-10-19T03:55:48Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ mpb_1.11.1-4_amd64.changes: --------------------------- Format: 1.8 Date: Wed, 15 Sep 2021 22:17:01 +0200 Source: mpb Binary: mpb mpb-dev mpb-doc mpb-mpi mpb-scm Built-For-Profiles: noudeb Architecture: amd64 all Version: 1.11.1-4 Distribution: jammy-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Thorsten Alteholz Description: mpb - MIT Photonic-Bands mpb-dev - MIT Photonic-Bands development files mpb-doc - MIT Photonic-Bands documentation mpb-mpi - MIT Photonic-Bands, parallel (mpich) version mpb-scm - MIT Photonic-Bands initialisation files Closes: 993250 Changes: mpb (1.11.1-4) unstable; urgency=medium . * remove example makefile to allow reproducible build of package thanks to Simon McVittie for the patch (CLoses: #993250) Autotools build systems are generally not intended to be portable between directories or between systems, and this Makefile contains absolute paths to the package's build directory and detected absolute paths to tools such as grep, making it non-reproducible. * debian/control: bump Standards Version to 4.6.0 (no changes) * debian/control: add Rules-Requires-Root: Checksums-Sha1: 2da3388320a93a4cb94548801c2811ca01928670 640056 mpb-dbgsym_1.11.1-4_amd64.ddeb 032d9e8e44f19588c02736ac4497c08d1f53ff7b 8288 mpb-dev_1.11.1-4_amd64.deb b0ebdcbb581911b54dc459dd9ecdc7a00822d8b7 1129958 mpb-doc_1.11.1-4_all.deb 2d407c4aa82d35c9504a00c90a3af69f1ecfecac 620374 mpb-mpi-dbgsym_1.11.1-4_amd64.ddeb dabd81360e0c907336b17fbd9f0bfa5e32db5606 241864 mpb-mpi_1.11.1-4_amd64.deb 42df087be4752ecf61a8fe89eea384bdded82e6b 12266 mpb-scm_1.11.1-4_all.deb f13d5ac2c1bcb540cb603ad801ce24402de1f313 11390 mpb_1.11.1-4_amd64.buildinfo c81c26dabaa07f112141970da70b14d6a87f588a 271174 mpb_1.11.1-4_amd64.deb Checksums-Sha256: c3a07e295917fb85673ec54b366004cedef01a4e4c67ae8998fd2858dff823e6 640056 mpb-dbgsym_1.11.1-4_amd64.ddeb 6d7c57759319984bdbae41e8e40e0b27bfc7fe9d99d8566800c9ec7fc42481d0 8288 mpb-dev_1.11.1-4_amd64.deb 5b08c6f0f3173deb88d32ecdc6a2bde7b536d23eaacf5d2c6f9ba93944ab3673 1129958 mpb-doc_1.11.1-4_all.deb 5be9f95bdd0f6be088425d53c878922c5d7433c988c36ea50c89243f95b3ff51 620374 mpb-mpi-dbgsym_1.11.1-4_amd64.ddeb 03157769b2190f377fc96f69d50f0e0719742c159415e92fd0302fcf6a679d90 241864 mpb-mpi_1.11.1-4_amd64.deb fb6dbf49b8f948677cc412a3684bd6d7a4fc95268a6e9f66522b950f2022c8a7 12266 mpb-scm_1.11.1-4_all.deb c95c709af99ccd38adb489ab2ecdf85821d0e7050d570ad3214bb107d98a30f5 11390 mpb_1.11.1-4_amd64.buildinfo f3015eb13b06b408b384bb1f8b578fa1a432ea01b0350ecfca776f240a5babb6 271174 mpb_1.11.1-4_amd64.deb Files: 78b00e9ca62be83620fa91cf9cf6b046 640056 debug optional mpb-dbgsym_1.11.1-4_amd64.ddeb b04837f82ed8893a58ca6745c472ac7a 8288 devel optional mpb-dev_1.11.1-4_amd64.deb 9e09760cac869b7dc9a15127d85d82af 1129958 doc optional mpb-doc_1.11.1-4_all.deb d8588d37ed1cb4e633cb39f6ed3cd16d 620374 debug optional mpb-mpi-dbgsym_1.11.1-4_amd64.ddeb de6465c09220a4982d59a72965d8ec3e 241864 science optional mpb-mpi_1.11.1-4_amd64.deb 88e57fea7ed9bb4a81df1a708057d558 12266 science optional mpb-scm_1.11.1-4_all.deb f2df8082d387ef25a568d29b7a0a85d9 11390 science optional mpb_1.11.1-4_amd64.buildinfo 4e90ccca7490e39bf1cd539cb41744f0 271174 science optional mpb_1.11.1-4_amd64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: mpb Binary: mpb mpb-dbgsym mpb-dev mpb-doc mpb-mpi mpb-mpi-dbgsym mpb-scm Architecture: all amd64 Version: 1.11.1-4 Checksums-Md5: 78b00e9ca62be83620fa91cf9cf6b046 640056 mpb-dbgsym_1.11.1-4_amd64.ddeb b04837f82ed8893a58ca6745c472ac7a 8288 mpb-dev_1.11.1-4_amd64.deb 9e09760cac869b7dc9a15127d85d82af 1129958 mpb-doc_1.11.1-4_all.deb d8588d37ed1cb4e633cb39f6ed3cd16d 620374 mpb-mpi-dbgsym_1.11.1-4_amd64.ddeb de6465c09220a4982d59a72965d8ec3e 241864 mpb-mpi_1.11.1-4_amd64.deb 88e57fea7ed9bb4a81df1a708057d558 12266 mpb-scm_1.11.1-4_all.deb 4e90ccca7490e39bf1cd539cb41744f0 271174 mpb_1.11.1-4_amd64.deb Checksums-Sha1: 2da3388320a93a4cb94548801c2811ca01928670 640056 mpb-dbgsym_1.11.1-4_amd64.ddeb 032d9e8e44f19588c02736ac4497c08d1f53ff7b 8288 mpb-dev_1.11.1-4_amd64.deb b0ebdcbb581911b54dc459dd9ecdc7a00822d8b7 1129958 mpb-doc_1.11.1-4_all.deb 2d407c4aa82d35c9504a00c90a3af69f1ecfecac 620374 mpb-mpi-dbgsym_1.11.1-4_amd64.ddeb dabd81360e0c907336b17fbd9f0bfa5e32db5606 241864 mpb-mpi_1.11.1-4_amd64.deb 42df087be4752ecf61a8fe89eea384bdded82e6b 12266 mpb-scm_1.11.1-4_all.deb c81c26dabaa07f112141970da70b14d6a87f588a 271174 mpb_1.11.1-4_amd64.deb Checksums-Sha256: c3a07e295917fb85673ec54b366004cedef01a4e4c67ae8998fd2858dff823e6 640056 mpb-dbgsym_1.11.1-4_amd64.ddeb 6d7c57759319984bdbae41e8e40e0b27bfc7fe9d99d8566800c9ec7fc42481d0 8288 mpb-dev_1.11.1-4_amd64.deb 5b08c6f0f3173deb88d32ecdc6a2bde7b536d23eaacf5d2c6f9ba93944ab3673 1129958 mpb-doc_1.11.1-4_all.deb 5be9f95bdd0f6be088425d53c878922c5d7433c988c36ea50c89243f95b3ff51 620374 mpb-mpi-dbgsym_1.11.1-4_amd64.ddeb 03157769b2190f377fc96f69d50f0e0719742c159415e92fd0302fcf6a679d90 241864 mpb-mpi_1.11.1-4_amd64.deb fb6dbf49b8f948677cc412a3684bd6d7a4fc95268a6e9f66522b950f2022c8a7 12266 mpb-scm_1.11.1-4_all.deb f3015eb13b06b408b384bb1f8b578fa1a432ea01b0350ecfca776f240a5babb6 271174 mpb_1.11.1-4_amd64.deb Build-Origin: Ubuntu Build-Architecture: amd64 Build-Date: Tue, 19 Oct 2021 03:55:48 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: adduser (= 3.118ubuntu5), autoconf (= 2.71-2), automake (= 1:1.16.4-2), autopoint (= 0.21-4ubuntu3), autotools-dev (= 20180224.1+nmu1), base-files (= 12ubuntu1), base-passwd (= 3.5.52), bash (= 5.1-3ubuntu2), binutils (= 2.37-7ubuntu1), binutils-common (= 2.37-7ubuntu1), binutils-x86-64-linux-gnu (= 2.37-7ubuntu1), bsdextrautils (= 2.36.1-8ubuntu2), bsdutils (= 1:2.36.1-8ubuntu2), build-essential (= 12.9ubuntu2), bzip2 (= 1.0.8-4ubuntu4), coreutils (= 8.32-4ubuntu3), cpp (= 4:11.2.0-1ubuntu1), cpp-11 (= 11.2.0-7ubuntu2), dash (= 0.5.11+git20210120+802ebd4-1build1), debconf (= 1.5.77), debhelper (= 13.3.4ubuntu2), debianutils (= 5.5-1), debugedit (= 1:5.0-0ubuntu2), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.12.0-1), diffstat (= 1.64-1build1), diffutils (= 1:3.8-0ubuntu1), dpkg (= 1.20.9ubuntu2), dpkg-dev (= 1.20.9ubuntu2), dwz (= 0.14-1build1), ed (= 1.17-1build1), file (= 1:5.39-3build1), findutils (= 4.8.0-1ubuntu2), g++ (= 4:11.2.0-1ubuntu1), g++-11 (= 11.2.0-7ubuntu2), gcc (= 4:11.2.0-1ubuntu1), gcc-11 (= 11.2.0-7ubuntu2), gcc-11-base (= 11.2.0-7ubuntu2), gettext (= 0.21-4ubuntu3), gettext-base (= 0.21-4ubuntu3), gfortran (= 4:11.2.0-1ubuntu1), gfortran-11 (= 11.2.0-7ubuntu2), grep (= 3.7-0ubuntu1), groff-base (= 1.22.4-7), guile-2.2 (= 2.2.7+1-6build1), guile-2.2-dev (= 2.2.7+1-6build1), guile-2.2-libs (= 2.2.7+1-6build1), guile-3.0 (= 3.0.5-4build1), guile-3.0-dev (= 3.0.5-4build1), guile-3.0-libs (= 3.0.5-4build1), gzip (= 1.10-4ubuntu2), hostname (= 3.23ubuntu1), ibverbs-providers (= 33.2-1ubuntu2), init-system-helpers (= 1.60build1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-10ubuntu2), libaec-dev (= 1.0.6-1), libaec0 (= 1.0.6-1), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.2.0-7ubuntu2), libatomic1 (= 11.2.0-7ubuntu2), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0-2ubuntu3), libaudit1 (= 1:3.0-2ubuntu3), libbinutils (= 2.37-7ubuntu1), libblas-dev (= 3.9.0-3ubuntu3), libblas3 (= 3.9.0-3ubuntu3), libblkid1 (= 2.36.1-8ubuntu2), libbrotli1 (= 1.0.9-2build4), libbsd0 (= 0.11.3-1ubuntu3), libbz2-1.0 (= 1.0.8-4ubuntu4), libc-bin (= 2.34-0ubuntu3), libc-dev-bin (= 2.34-0ubuntu3), libc6 (= 2.34-0ubuntu3), libc6-dev (= 2.34-0ubuntu3), libcap-ng0 (= 0.7.9-2.2build2), libcap2 (= 1:2.44-1build2), libcbor0.6 (= 0.6.0-0ubuntu4), libcc1-0 (= 11.2.0-7ubuntu2), libcom-err2 (= 1.46.3-1ubuntu3), libcrypt-dev (= 1:4.4.18-4ubuntu2), libcrypt1 (= 1:4.4.18-4ubuntu2), libctf-nobfd0 (= 2.37-7ubuntu1), libctf0 (= 2.37-7ubuntu1), libctl-dev (= 4.5.0-9), libctl7 (= 4.5.0-9), libcurl4 (= 7.74.0-1.3ubuntu2), libcurl4-openssl-dev (= 7.74.0-1.3ubuntu2), libdb5.3 (= 5.3.28+dfsg1-0.8ubuntu2), libdebconfclient0 (= 0.256ubuntu4), libdebhelper-perl (= 13.3.4ubuntu2), libdpkg-perl (= 1.20.9ubuntu2), libdw1 (= 0.185-2), libedit2 (= 3.1-20210910-1), libelf1 (= 0.185-2), libevent-2.1-7 (= 2.1.12-stable-1build1), libevent-core-2.1-7 (= 2.1.12-stable-1build1), libevent-dev (= 2.1.12-stable-1build1), libevent-extra-2.1-7 (= 2.1.12-stable-1build1), libevent-openssl-2.1-7 (= 2.1.12-stable-1build1), libevent-pthreads-2.1-7 (= 2.1.12-stable-1build1), libfabric1 (= 1.11.0-2), libffi8 (= 3.4.2-1ubuntu5), libfftw3-bin (= 3.3.8-2ubuntu7), libfftw3-dev (= 3.3.8-2ubuntu7), libfftw3-double3 (= 3.3.8-2ubuntu7), libfftw3-long3 (= 3.3.8-2ubuntu7), libfftw3-mpi-dev (= 3.3.8-2ubuntu7), libfftw3-mpi3 (= 3.3.8-2ubuntu7), libfftw3-quad3 (= 3.3.8-2ubuntu7), libfftw3-single3 (= 3.3.8-2ubuntu7), libfido2-1 (= 1.8.0-1), libfile-stripnondeterminism-perl (= 1.12.0-1), libgc-dev (= 1:8.0.4-3build1), libgc1 (= 1:8.0.4-3build1), libgcc-11-dev (= 11.2.0-7ubuntu2), libgcc-s1 (= 11.2.0-7ubuntu2), libgcrypt20 (= 1.8.7-5ubuntu2), libgdbm-compat4 (= 1.21-1), libgdbm6 (= 1.21-1), libgfortran-11-dev (= 11.2.0-7ubuntu2), libgfortran5 (= 11.2.0-7ubuntu2), libglib2.0-0 (= 2.68.4-1ubuntu1), libgmp-dev (= 2:6.2.1+dfsg-1ubuntu3), libgmp10 (= 2:6.2.1+dfsg-1ubuntu3), libgmpxx4ldbl (= 2:6.2.1+dfsg-1ubuntu3), libgnutls30 (= 3.7.1-5ubuntu1), libgomp1 (= 11.2.0-7ubuntu2), libgpg-error0 (= 1.42-3), libgssapi-krb5-2 (= 1.18.3-7), libhdf5-mpi-dev (= 1.10.7+repack-4), libhdf5-openmpi-103-1 (= 1.10.7+repack-4), libhdf5-openmpi-cpp-103-1 (= 1.10.7+repack-4), libhdf5-openmpi-dev (= 1.10.7+repack-4), libhdf5-openmpi-fortran-102 (= 1.10.7+repack-4), libhdf5-openmpi-hl-100 (= 1.10.7+repack-4), libhdf5-openmpi-hl-cpp-100 (= 1.10.7+repack-4), libhdf5-openmpi-hl-fortran-100 (= 1.10.7+repack-4), libhogweed6 (= 3.7.3-1build1), libhwloc-dev (= 2.4.1+dfsg-1), libhwloc-plugins (= 2.4.1+dfsg-1), libhwloc15 (= 2.4.1+dfsg-1), libibverbs-dev (= 33.2-1ubuntu2), libibverbs1 (= 33.2-1ubuntu2), libicu67 (= 67.1-7ubuntu1), libidn2-0 (= 2.3.2-2), libisl23 (= 0.24-2), libitm1 (= 11.2.0-7ubuntu2), libjpeg-dev (= 8c-2ubuntu8), libjpeg-turbo8 (= 2.0.6-0ubuntu3), libjpeg-turbo8-dev (= 2.0.6-0ubuntu3), libjpeg8 (= 8c-2ubuntu8), libjpeg8-dev (= 8c-2ubuntu8), libjs-jquery (= 3.5.1+dfsg+~3.5.5-7), libjs-jquery-ui (= 1.12.1+dfsg-8), libk5crypto3 (= 1.18.3-7), libkeyutils1 (= 1.6.1-2ubuntu2), libkrb5-3 (= 1.18.3-7), libkrb5support0 (= 1.18.3-7), liblapack-dev (= 3.9.0-3ubuntu3), liblapack3 (= 3.9.0-3ubuntu3), libldap-2.5-0 (= 2.5.6+dfsg-1~exp1ubuntu1), liblsan0 (= 11.2.0-7ubuntu2), libltdl-dev (= 2.4.6-15build1), libltdl7 (= 2.4.6-15build1), liblz4-1 (= 1.9.3-2build1), liblzma5 (= 5.2.5-2build1), libmagic-mgc (= 1:5.39-3build1), libmagic1 (= 1:5.39-3build1), libmd0 (= 1.0.4-1), libmount1 (= 2.36.1-8ubuntu2), libmpc3 (= 1.2.1-1), libmpfr6 (= 4.1.0-3build2), libncurses-dev (= 6.2+20210905-1), libncurses5-dev (= 6.2+20210905-1), libncurses6 (= 6.2+20210905-1), libncursesw6 (= 6.2+20210905-1), libnettle8 (= 3.7.3-1build1), libnghttp2-14 (= 1.43.0-1build1), libnl-3-200 (= 3.4.0-1build3), libnl-3-dev (= 3.4.0-1build3), libnl-route-3-200 (= 3.4.0-1build3), libnl-route-3-dev (= 3.4.0-1build3), libnsl-dev (= 1.3.0-2build1), libnsl2 (= 1.3.0-2build1), libnuma-dev (= 2.0.14-0ubuntu3), libnuma1 (= 2.0.14-0ubuntu3), libopenmpi-dev (= 4.1.0-10ubuntu1), libopenmpi3 (= 4.1.0-10ubuntu1), libp11-kit0 (= 0.24.0-5), libpam-modules (= 1.3.1-5ubuntu11), libpam-modules-bin (= 1.3.1-5ubuntu11), libpam-runtime (= 1.3.1-5ubuntu11), libpam0g (= 1.3.1-5ubuntu11), libpciaccess0 (= 0.16-1build3), libpcre2-8-0 (= 10.37-0ubuntu2), libpcre3 (= 2:8.39-13build4), libperl5.32 (= 5.32.1-3ubuntu3), libpipeline1 (= 1.5.3-1build1), libpmix-dev (= 4.1.0-3ubuntu2), libpmix2 (= 4.1.0-3ubuntu2), libpsl5 (= 0.21.0-1.2build1), libpsm-infinipath1 (= 3.3+20.604758e7-6.1), libpsm2-2 (= 11.2.185-1), libquadmath0 (= 11.2.0-7ubuntu2), librdmacm1 (= 33.2-1ubuntu2), libreadline-dev (= 8.1-2build1), libreadline8 (= 8.1-2build1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build3), libsasl2-2 (= 2.1.27+dfsg-2.1build1), libsasl2-modules-db (= 2.1.27+dfsg-2.1build1), libseccomp2 (= 2.5.1-1ubuntu2), libselinux1 (= 3.1-3build3), libsemanage-common (= 3.1-1ubuntu3), libsemanage1 (= 3.1-1ubuntu3), libsepol1 (= 3.1-1ubuntu2), libsigsegv2 (= 2.13-1ubuntu2), libsmartcols1 (= 2.36.1-8ubuntu2), libssh-4 (= 0.9.6-1), libssl-dev (= 1.1.1l-1ubuntu1), libssl1.1 (= 1.1.1l-1ubuntu1), libstdc++-11-dev (= 11.2.0-7ubuntu2), libstdc++6 (= 11.2.0-7ubuntu2), libsub-override-perl (= 0.09-2), libsystemd0 (= 248.3-1ubuntu8), libsz2 (= 1.0.6-1), libtasn1-6 (= 4.16.0-2build1), libtinfo6 (= 6.2+20210905-1), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15build1), libtsan0 (= 11.2.0-7ubuntu2), libubsan1 (= 11.2.0-7ubuntu2), libuchardet0 (= 0.0.7-1build1), libucx0 (= 1.10.1~rc1+really.1.10.0-1), libudev1 (= 248.3-1ubuntu8), libunistring2 (= 0.9.10-6), libuuid1 (= 2.36.1-8ubuntu2), libx11-6 (= 2:1.7.2-2), libx11-data (= 2:1.7.2-2), libxau6 (= 1:1.0.9-1build4), libxcb1 (= 1.14-3ubuntu2), libxdmcp6 (= 1:1.1.3-0ubuntu4), libxext6 (= 2:1.3.4-0ubuntu4), libxml2 (= 2.9.12+dfsg-5), libxnvctrl0 (= 470.57.01-0ubuntu3), libzstd1 (= 1.4.8+dfsg-3), linux-libc-dev (= 5.13.0-19.19), login (= 1:4.8.1-1ubuntu9), lsb-base (= 11.1.0ubuntu3), lto-disabled-list (= 16), m4 (= 1.4.18-5ubuntu1), make (= 4.3-4ubuntu2), man-db (= 2.9.4-2build1), mawk (= 1.3.4.20200120-2build1), mpi-default-dev (= 1.14), ncurses-base (= 6.2+20210905-1), ncurses-bin (= 6.2+20210905-1), ocl-icd-libopencl1 (= 2.2.14-2), openmpi-bin (= 4.1.0-10ubuntu1), openmpi-common (= 4.1.0-10ubuntu1), openssh-client (= 1:8.4p1-6ubuntu2), passwd (= 1:4.8.1-1ubuntu9), patch (= 2.7.6-7build1), perl (= 5.32.1-3ubuntu3), perl-base (= 5.32.1-3ubuntu3), perl-modules-5.32 (= 5.32.1-3ubuntu3), pkg-config (= 0.29.2-1ubuntu2), po-debconf (= 1.0.21+nmu1), quilt (= 0.66-2.1), readline-common (= 8.1-2build1), rpcsvc-proto (= 1.4.2-0ubuntu5), sed (= 4.7-1ubuntu2), sensible-utils (= 0.0.17), sysvinit-utils (= 2.96-7ubuntu2), tar (= 1.34+dfsg-1build2), util-linux (= 2.36.1-8ubuntu2), xz-utils (= 5.2.5-2build1), zlib1g (= 1:1.2.11.dfsg-2ubuntu7), zlib1g-dev (= 1:1.2.11.dfsg-2ubuntu7) Environment: DEB_BUILD_OPTIONS="parallel=4" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1631737021" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ mpb-dev_1.11.1-4_amd64.deb -------------------------- new Debian package, version 2.0. size 8288 bytes: control archive=941 bytes. 802 bytes, 20 lines control 666 bytes, 11 lines md5sums Package: mpb-dev Source: mpb Version: 1.11.1-4 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Thorsten Alteholz Installed-Size: 48 Suggests: mpb Breaks: mpb (<= 1.3-2) Section: devel Priority: optional Homepage: https://mpb.readthedocs.io Description: MIT Photonic-Bands development files The MIT Photonic-Bands package is a free program for computing the band structures (dispersion relations) and electromagnetic modes of periodic dielectric structures, on both serial and parallel computers. It was developed by Steven G. Johnson at MIT in the Joannopoulos Ab Initio Physics group, and designed to study photonic crystal structures. . This package contains the header files for development of own software. drwxr-xr-x root/root 0 2021-09-15 20:17 ./ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/include/ -rw-r--r-- root/root 531 2021-09-15 20:17 ./usr/include/mpb.h drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/include/mpb/ -rw-r--r-- root/root 3669 2021-09-15 20:17 ./usr/include/mpb/eigensolver.h -rw-r--r-- root/root 5196 2021-09-15 20:17 ./usr/include/mpb/matrices.h -rw-r--r-- root/root 9579 2021-09-15 20:17 ./usr/include/mpb/maxwell.h -rw-r--r-- root/root 7004 2021-09-15 20:17 ./usr/include/mpb/scalar.h -rw-r--r-- root/root 1083 2021-09-15 20:17 ./usr/include/mpb/verbosity.h -rw-r--r-- root/root 531 2021-09-15 20:17 ./usr/include/mpb_mpi.h -rw-r--r-- root/root 534 2021-09-15 20:17 ./usr/include/mpbi.h -rw-r--r-- root/root 534 2021-09-15 20:17 ./usr/include/mpbi_mpi.h drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb-dev/ -rw-r--r-- root/root 897 2021-09-15 20:17 ./usr/share/doc/mpb-dev/changelog.Debian.gz -rw-r--r-- root/root 1325 2021-01-06 21:17 ./usr/share/doc/mpb-dev/copyright mpb-doc_1.11.1-4_all.deb ------------------------ new Debian package, version 2.0. size 1129958 bytes: control archive=2872 bytes. 813 bytes, 21 lines control 6702 bytes, 77 lines md5sums Package: mpb-doc Source: mpb Version: 1.11.1-4 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Thorsten Alteholz Installed-Size: 1752 Recommends: libctl-doc Suggests: doc-base, mpb Breaks: mpb (<= 1.3-2) Section: doc Priority: optional Homepage: https://mpb.readthedocs.io Description: MIT Photonic-Bands documentation The MIT Photonic-Bands package is a free program for computing the band structures (dispersion relations) and electromagnetic modes of periodic dielectric structures, on both serial and parallel computers. It was developed by Steven G. Johnson at MIT in the Joannopoulos Ab Initio Physics group, and designed to study photonic crystal structures. . This package contains the documentation in HTML format. drwxr-xr-x root/root 0 2021-09-15 20:17 ./ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc-base/ -rw-r--r-- root/root 636 2021-01-06 21:17 ./usr/share/doc-base/mpb drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb-doc/ -rw-r--r-- root/root 897 2021-09-15 20:17 ./usr/share/doc/mpb-doc/changelog.Debian.gz -rw-r--r-- root/root 1325 2021-01-06 21:17 ./usr/share/doc/mpb-doc/copyright drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb-doc/html/ -rw-r--r-- root/root 709 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/README drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb-doc/html/docs/ -rw-r--r-- root/root 1429 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/Acknowledgements.md -rw-r--r-- root/root 7644 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/Data_Analysis_Tutorial.md.gz -rw-r--r-- root/root 5067 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/Developer_Information.md.gz -rw-r--r-- root/root 1645 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/Download.md -rw-r--r-- root/root 2123 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/Guile_and_Scheme_Information.md.gz -rw-r--r-- root/root 9456 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/Installation.md.gz -rw-r--r-- root/root 5839 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/Introduction.md.gz -rw-r--r-- root/root 2113 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/License_and_Copyright.md -rw-r--r-- root/root 7217 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/Python_Data_Analysis_Tutorial.md.gz -rw-r--r-- root/root 10982 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/Python_Tutorial.md.gz -rw-r--r-- root/root 16797 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/Python_User_Interface.md.gz -rw-r--r-- root/root 12397 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/Scheme_Tutorial.md.gz -rw-r--r-- root/root 21387 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/Scheme_User_Interface.md.gz -rw-r--r-- root/root 3559 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/The_Run_Function_Is_Not_A_Loop.md drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb-doc/html/docs/images/ -rw-r--r-- root/root 9896 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/Mpb-logo.jpg -rw-r--r-- root/root 47765 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/diamond-b1-eps.gif -rw-r--r-- root/root 40845 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/diamond-b1.gif -rw-r--r-- root/root 58525 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/diamond-b3-eps.gif -rw-r--r-- root/root 46253 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/diamond-b3.gif -rw-r--r-- root/root 7048 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/diamond-bands.gif -rw-r--r-- root/root 47549 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/diamond-eps.gif -rw-r--r-- root/root 316855 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/tri-lattice.png -rw-r--r-- root/root 66960 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/tri-rods-bands.png -rw-r--r-- root/root 1300 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/tri-rods-eps-1.gif -rw-r--r-- root/root 1454 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/tri-rods-eps-2.gif -rw-r--r-- root/root 6840 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/tri-rods-ez1.gif -rw-r--r-- root/root 8479 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/tri-rods-ez2.gif -rw-r--r-- root/root 9064 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/tri-rods-ez3.gif -rw-r--r-- root/root 8740 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/tri-rods-ez4.gif -rw-r--r-- root/root 9507 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/tri-rods-ez5.gif -rw-r--r-- root/root 6928 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/tri-rods-ez6.gif -rw-r--r-- root/root 9423 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/tri-rods-ez7.gif -rw-r--r-- root/root 9483 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/images/tri-rods-ez8.gif -rw-r--r-- root/root 2272 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/docs/index.md.gz drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/ -rw-r--r-- root/root 3925 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/base.html -rw-r--r-- root/root 934 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/breadcrumbs.html drwxr-xr-x root/root 0 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/css/ -rw-r--r-- root/root 1683 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/css/highlight.css -rw-r--r-- root/root 94460 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/css/theme.css -rw-r--r-- root/root 3912 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/css/theme_extra.css drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/fonts/ -rw-r--r-- root/root 37372 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/fonts/fontawesome-webfont.eot.gz -rw-r--r-- root/root 197829 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/fonts/fontawesome-webfont.svg -rw-r--r-- root/root 43393 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/fonts/fontawesome-webfont.ttf.gz -rw-r--r-- root/root 43568 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/fonts/fontawesome-webfont.woff.gz -rw-r--r-- root/root 1059 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/footer.html drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/img/ -rw-r--r-- root/root 9896 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/img/Mpb-logo.jpg lrwxrwxrwx root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/img/favicon.ico -> Mpb-logo.jpg drwxr-xr-x root/root 0 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/js/ -rw-r--r-- root/root 2215 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/js/extra.js -rw-r--r-- root/root 300764 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/js/highlight.pack.js -rw-r--r-- root/root 84245 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/js/jquery-2.1.1.min.js -rw-r--r-- root/root 159 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/js/mathjaxhelper.js -rw-r--r-- root/root 11084 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/js/modernizr-2.8.3.min.js -rw-r--r-- root/root 1751 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/js/theme.js -rw-r--r-- root/root 694 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/search.html -rw-r--r-- root/root 194 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/searchbox.html -rw-r--r-- root/root 871 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/toc.html -rw-r--r-- root/root 737 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/versions.html -rw-r--r-- root/root 21 2020-10-23 18:44 ./usr/share/doc/mpb-doc/html/requirements.txt drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb/examples/ -rw-r--r-- root/root 194 2020-10-23 18:44 ./usr/share/doc/mpb/examples/Makefile.am -rw-r--r-- root/root 13172 2021-09-15 20:17 ./usr/share/doc/mpb/examples/Makefile.in -rw-r--r-- root/root 1115 2020-10-23 18:44 ./usr/share/doc/mpb/examples/bragg-sine.ctl -rw-r--r-- root/root 770 2020-10-23 18:44 ./usr/share/doc/mpb/examples/bragg.ctl -rw-r--r-- root/root 24558 2020-10-23 18:44 ./usr/share/doc/mpb/examples/check.ctl -rw-r--r-- root/root 1510 2020-10-23 18:44 ./usr/share/doc/mpb/examples/diamond.ctl -rw-r--r-- root/root 2294 2020-10-23 18:44 ./usr/share/doc/mpb/examples/dos.scm -rw-r--r-- root/root 2282 2020-10-23 18:44 ./usr/share/doc/mpb/examples/hole-slab.ctl -rw-r--r-- root/root 1671 2020-10-23 18:44 ./usr/share/doc/mpb/examples/honey-rods.ctl -rw-r--r-- root/root 1997 2020-10-23 18:44 ./usr/share/doc/mpb/examples/line-defect.ctl -rw-r--r-- root/root 1037 2020-10-23 18:44 ./usr/share/doc/mpb/examples/sq-rods.ctl -rw-r--r-- root/root 2984 2020-10-23 18:44 ./usr/share/doc/mpb/examples/strip.ctl -rw-r--r-- root/root 1350 2020-10-23 18:44 ./usr/share/doc/mpb/examples/tri-holes.ctl -rw-r--r-- root/root 914 2020-10-23 18:44 ./usr/share/doc/mpb/examples/tri-rods.ctl -rw-r--r-- root/root 5066 2020-10-23 18:44 ./usr/share/doc/mpb/examples/tutorial.ctl -rw-r--r-- root/root 1115 2020-10-23 18:44 ./usr/share/doc/mpb/examples/wavevector.scm drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/lintian/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 77 2021-01-06 21:17 ./usr/share/lintian/overrides/mpb-doc mpb-mpi_1.11.1-4_amd64.deb -------------------------- new Debian package, version 2.0. size 241864 bytes: control archive=1096 bytes. 1143 bytes, 23 lines control 533 bytes, 9 lines md5sums Package: mpb-mpi Source: mpb Version: 1.11.1-4 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Thorsten Alteholz Installed-Size: 1000 Depends: guile-3.0-libs, libblas3 | libblas.so.3, libc6 (>= 2.34), libctl7 (>= 4.3.0), libfftw3-double3 (>= 3.3.5), libfftw3-mpi3, libhdf5-openmpi-103-1 (>= 1.8.14), liblapack3 | liblapack.so.3, libopenmpi3 (>= 4.1.0), mpi-default-bin, mpb-scm Recommends: h5utils Suggests: mpb-doc Section: science Priority: optional Homepage: https://mpb.readthedocs.io Description: MIT Photonic-Bands, parallel (mpich) version The MIT Photonic-Bands package is a free program for computing the band structures (dispersion relations) and electromagnetic modes of periodic dielectric structures, on both serial and parallel computers. It was developed by Steven G. Johnson at MIT in the Joannopoulos Ab Initio Physics group, and designed to study photonic crystal structures. . This package contains a parallel version of MPB, using the mpich implementation of the MPI protocol. It allows for calculations on clusters of computers. drwxr-xr-x root/root 0 2021-09-15 20:17 ./ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/bin/ -rwxr-xr-x root/root 317832 2021-09-15 20:17 ./usr/bin/mpb-mpi -rwxr-xr-x root/root 330120 2021-09-15 20:17 ./usr/bin/mpbi-mpi drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/lib/ -rw-r--r-- root/root 173662 2021-09-15 20:17 ./usr/lib/libmpb_mpi.a -rw-r--r-- root/root 889 2021-09-15 20:17 ./usr/lib/libmpb_mpi.la -rw-r--r-- root/root 178686 2021-09-15 20:17 ./usr/lib/libmpbi_mpi.a -rw-r--r-- root/root 892 2021-09-15 20:17 ./usr/lib/libmpbi_mpi.la drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb-mpi/ -rw-r--r-- root/root 897 2021-09-15 20:17 ./usr/share/doc/mpb-mpi/changelog.Debian.gz -rw-r--r-- root/root 1325 2021-01-06 21:17 ./usr/share/doc/mpb-mpi/copyright drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/man/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/man/man1/ -rw-r--r-- root/root 881 2021-09-15 20:17 ./usr/share/man/man1/mpb-mpi.1.gz lrwxrwxrwx root/root 0 2021-09-15 20:17 ./usr/share/man/man1/mpbi-mpi.1.gz -> mpb-mpi.1.gz mpb-scm_1.11.1-4_all.deb ------------------------ new Debian package, version 2.0. size 12266 bytes: control archive=708 bytes. 751 bytes, 18 lines control 198 bytes, 3 lines md5sums Package: mpb-scm Source: mpb Version: 1.11.1-4 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Thorsten Alteholz Installed-Size: 52 Section: science Priority: optional Homepage: https://mpb.readthedocs.io Description: MIT Photonic-Bands initialisation files The MIT Photonic-Bands package is a free program for computing the band structures (dispersion relations) and electromagnetic modes of periodic dielectric structures, on both serial and parallel computers. It was developed by Steven G. Johnson at MIT in the Joannopoulos Ab Initio Physics group, and designed to study photonic crystal structures. . This package contains files for initialisation of MPB. drwxr-xr-x root/root 0 2021-09-15 20:17 ./ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb-scm/ -rw-r--r-- root/root 897 2021-09-15 20:17 ./usr/share/doc/mpb-scm/changelog.Debian.gz -rw-r--r-- root/root 1325 2021-01-06 21:17 ./usr/share/doc/mpb-scm/copyright drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/mpb/ -rw-r--r-- root/root 38540 2021-09-15 20:17 ./usr/share/mpb/mpb.scm mpb_1.11.1-4_amd64.deb ---------------------- new Debian package, version 2.0. size 271174 bytes: control archive=1198 bytes. 885 bytes, 18 lines control 1091 bytes, 19 lines md5sums Package: mpb Version: 1.11.1-4 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Thorsten Alteholz Installed-Size: 1090 Depends: guile-3.0-libs, libblas3 | libblas.so.3, libc6 (>= 2.34), libctl7 (>= 4.3.0), libfftw3-double3 (>= 3.3.5), libhdf5-openmpi-103-1 (>= 1.8.14), liblapack3 | liblapack.so.3, mpb-scm Recommends: h5utils Suggests: mpb-doc Section: science Priority: optional Homepage: https://mpb.readthedocs.io Description: MIT Photonic-Bands The MIT Photonic-Bands package is a free program for computing the band structures (dispersion relations) and electromagnetic modes of periodic dielectric structures, on both serial and parallel computers. It was developed by Steven G. Johnson at MIT in the Joannopoulos Ab Initio Physics group, and designed to study photonic crystal structures. drwxr-xr-x root/root 0 2021-09-15 20:17 ./ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/bin/ -rwxr-xr-x root/root 313656 2021-09-15 20:17 ./usr/bin/mpb -rwxr-xr-x root/root 47416 2021-09-15 20:17 ./usr/bin/mpb-data -rwxr-xr-x root/root 1073 2021-09-15 20:17 ./usr/bin/mpb-split -rwxr-xr-x root/root 317752 2021-09-15 20:17 ./usr/bin/mpbi -rwxr-xr-x root/root 47416 2021-09-15 20:17 ./usr/bin/mpbi-data -rwxr-xr-x root/root 1075 2021-09-15 20:17 ./usr/bin/mpbi-split drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/lib/ -rw-r--r-- root/root 168238 2021-09-15 20:17 ./usr/lib/libmpb.a -rw-r--r-- root/root 877 2021-09-15 20:17 ./usr/lib/libmpb.la -rw-r--r-- root/root 172894 2021-09-15 20:17 ./usr/lib/libmpbi.a -rw-r--r-- root/root 880 2021-09-15 20:17 ./usr/lib/libmpbi.la drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/doc/mpb/ -rw-r--r-- root/root 8106 2020-10-23 18:44 ./usr/share/doc/mpb/NEWS.md.gz -rw-r--r-- root/root 361 2020-10-23 18:44 ./usr/share/doc/mpb/TODO -rw-r--r-- root/root 894 2021-09-15 20:17 ./usr/share/doc/mpb/changelog.Debian.gz -rw-r--r-- root/root 1325 2021-01-06 21:17 ./usr/share/doc/mpb/copyright drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/man/ drwxr-xr-x root/root 0 2021-09-15 20:17 ./usr/share/man/man1/ -rw-r--r-- root/root 2595 2021-09-15 20:17 ./usr/share/man/man1/mpb-data.1.gz -rw-r--r-- root/root 1658 2021-09-15 20:17 ./usr/share/man/man1/mpb-split.1.gz -rw-r--r-- root/root 1768 2021-09-15 20:17 ./usr/share/man/man1/mpb.1.gz -rw-r--r-- root/root 2595 2021-09-15 20:17 ./usr/share/man/man1/mpbi-data.1.gz lrwxrwxrwx root/root 0 2021-09-15 20:17 ./usr/share/man/man1/mpbi-split.1.gz -> mpbi.1.gz -rw-r--r-- root/root 873 2021-09-15 20:17 ./usr/share/man/man1/mpbi.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: binary Build-Space: n/a Build-Time: 81 Distribution: jammy-proposed Host Architecture: amd64 Install-Time: 15 Job: mpb_1.11.1-4.dsc Machine Architecture: amd64 Package: mpb Package-Time: 96 Source-Version: 1.11.1-4 Space: n/a Status: successful Version: 1.11.1-4 -------------------------------------------------------------------------------- Finished at 2021-10-19T03:55:48Z Build needed 00:01:36, no disk space Adding user buildd to group lxd RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=jammy --arch=amd64 PACKAGEBUILD-22300116 Scanning for processes to kill in build PACKAGEBUILD-22300116