https://launchpad.net/ubuntu/+source/mpb/1.11.1-5/+build/24939790 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lcy02-amd64-013 5.4.0-135-generic #152-Ubuntu SMP Wed Nov 23 20:19:22 UTC 2022 x86_64 Buildd toolchain package versions: launchpad-buildd_225~602~ubuntu20.04.1 python3-lpbuildd_225~602~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.6 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1. Syncing the system clock with the buildd NTP service... 15 Dec 05:22:41 ntpdate[1970]: adjust time server 10.131.248.1 offset -0.000918 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=lunar --arch=amd64 PACKAGEBUILD-24939790 --image-type chroot /home/buildd/filecache-default/bc95a5beca317e426bf1850638bb0efa95f27a71 Creating target for build PACKAGEBUILD-24939790 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=lunar --arch=amd64 PACKAGEBUILD-24939790 Starting target for build PACKAGEBUILD-24939790 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=lunar --arch=amd64 PACKAGEBUILD-24939790 'deb http://ftpmaster.internal/ubuntu lunar main universe' 'deb http://ftpmaster.internal/ubuntu lunar-security main universe' 'deb http://ftpmaster.internal/ubuntu lunar-updates main universe' 'deb http://ftpmaster.internal/ubuntu lunar-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-24939790 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=lunar --arch=amd64 PACKAGEBUILD-24939790 Updating target for build PACKAGEBUILD-24939790 Get:1 http://ftpmaster.internal/ubuntu lunar InRelease [267 kB] Get:2 http://ftpmaster.internal/ubuntu lunar-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu lunar-updates InRelease [90.7 kB] Get:4 http://ftpmaster.internal/ubuntu lunar-proposed InRelease [118 kB] Get:5 http://ftpmaster.internal/ubuntu lunar/main amd64 Packages [1392 kB] Get:6 http://ftpmaster.internal/ubuntu lunar/main Translation-en [510 kB] Get:7 http://ftpmaster.internal/ubuntu lunar/universe amd64 Packages [14.3 MB] Get:8 http://ftpmaster.internal/ubuntu lunar/universe Translation-en [5865 kB] Get:9 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 Packages [168 kB] Get:10 http://ftpmaster.internal/ubuntu lunar-proposed/main Translation-en [60.1 kB] Get:11 http://ftpmaster.internal/ubuntu lunar-proposed/universe amd64 Packages [1556 kB] Get:12 http://ftpmaster.internal/ubuntu lunar-proposed/universe Translation-en [541 kB] Fetched 25.0 MB in 3s (9542 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libperl5.34 perl-modules-5.34 Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: lsb-base* The following NEW packages will be installed: libjansson4 libperl5.36 perl-modules-5.36 The following packages will be upgraded: adduser binutils binutils-common binutils-x86-64-linux-gnu ca-certificates coreutils cpp-12 dash debconf dpkg dpkg-dev g++-12 gcc-12 gcc-12-base libapparmor1 libasan8 libatomic1 libbinutils libcap2 libcc1-0 libctf-nobfd0 libctf0 libdpkg-perl libgcc-12-dev libgcc-s1 libgomp1 libgprofng0 libitm1 libkmod2 liblsan0 liblz4-1 liblzma5 libquadmath0 libssl3 libstdc++-12-dev libstdc++6 libsystemd-shared libsystemd0 libtsan2 libubsan1 libudev1 linux-libc-dev openssl perl perl-base systemd systemd-sysv sysvinit-utils xz-utils zlib1g 50 upgraded, 3 newly installed, 1 to remove and 0 not upgraded. Need to get 85.6 MB of archives. After this operation, 48.0 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 coreutils amd64 9.1-1ubuntu1 [1408 kB] Get:2 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 dpkg amd64 1.21.12ubuntu2 [1344 kB] Get:3 http://ftpmaster.internal/ubuntu lunar/main amd64 dash amd64 0.5.11+git20210903+057cd650a4ed-9ubuntu1 [88.5 kB] Get:4 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 perl-modules-5.36 all 5.36.0-6 [2985 kB] Get:5 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libperl5.36 amd64 5.36.0-6 [4805 kB] Get:6 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 perl amd64 5.36.0-6 [235 kB] Get:7 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 perl-base amd64 5.36.0-6 [1780 kB] Get:8 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 zlib1g amd64 1:1.2.13.dfsg-1ubuntu3 [61.6 kB] Get:9 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 sysvinit-utils amd64 3.05-7ubuntu1 [26.2 kB] Get:10 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 systemd-sysv amd64 252.1-1ubuntu1 [11.4 kB] Get:11 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 liblzma5 amd64 5.2.10-0.0 [103 kB] Get:12 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 debconf all 1.5.80 [125 kB] Get:13 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libssl3 amd64 3.0.5-2ubuntu2 [1893 kB] Get:14 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libkmod2 amd64 30+20220905-1ubuntu1 [49.6 kB] Get:15 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libapparmor1 amd64 3.0.8-1ubuntu1 [36.9 kB] Get:16 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libcap2 amd64 1:2.66-1ubuntu1 [27.7 kB] Get:17 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 liblz4-1 amd64 1.9.4-1 [63.1 kB] Get:18 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 systemd amd64 252.1-1ubuntu1 [2994 kB] Get:19 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libsystemd-shared amd64 252.1-1ubuntu1 [1756 kB] Get:20 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libsystemd0 amd64 252.1-1ubuntu1 [330 kB] Get:21 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libubsan1 amd64 12.2.0-10ubuntu1 [969 kB] Get:22 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libgomp1 amd64 12.2.0-10ubuntu1 [125 kB] Get:23 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libitm1 amd64 12.2.0-10ubuntu1 [29.5 kB] Get:24 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libatomic1 amd64 12.2.0-10ubuntu1 [10.4 kB] Get:25 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libasan8 amd64 12.2.0-10ubuntu1 [2429 kB] Get:26 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 liblsan0 amd64 12.2.0-10ubuntu1 [1060 kB] Get:27 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libquadmath0 amd64 12.2.0-10ubuntu1 [152 kB] Get:28 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 cpp-12 amd64 12.2.0-10ubuntu1 [10.6 MB] Get:29 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libcc1-0 amd64 12.2.0-10ubuntu1 [46.5 kB] Get:30 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libctf-nobfd0 amd64 2.39.50.20221211-0ubuntu1 [99.7 kB] Get:31 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libgprofng0 amd64 2.39.50.20221211-0ubuntu1 [898 kB] Get:32 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libctf0 amd64 2.39.50.20221211-0ubuntu1 [97.4 kB] Get:33 http://ftpmaster.internal/ubuntu lunar/main amd64 libjansson4 amd64 2.14-2 [33.0 kB] Get:34 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 binutils-x86-64-linux-gnu amd64 2.39.50.20221211-0ubuntu1 [2412 kB] Get:35 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libbinutils amd64 2.39.50.20221211-0ubuntu1 [660 kB] Get:36 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 binutils-common amd64 2.39.50.20221211-0ubuntu1 [235 kB] Get:37 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 binutils amd64 2.39.50.20221211-0ubuntu1 [3262 B] Get:38 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 gcc-12-base amd64 12.2.0-10ubuntu1 [19.6 kB] Get:39 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libstdc++6 amd64 12.2.0-10ubuntu1 [678 kB] Get:40 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libstdc++-12-dev amd64 12.2.0-10ubuntu1 [2158 kB] Get:41 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 g++-12 amd64 12.2.0-10ubuntu1 [12.0 MB] Get:42 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 gcc-12 amd64 12.2.0-10ubuntu1 [21.4 MB] Get:43 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libgcc-12-dev amd64 12.2.0-10ubuntu1 [2577 kB] Get:44 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libtsan2 amd64 12.2.0-10ubuntu1 [2456 kB] Get:45 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libgcc-s1 amd64 12.2.0-10ubuntu1 [53.9 kB] Get:46 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libudev1 amd64 252.1-1ubuntu1 [88.7 kB] Get:47 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 adduser all 3.129ubuntu1 [59.0 kB] Get:48 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 openssl amd64 3.0.5-2ubuntu2 [1178 kB] Get:49 http://ftpmaster.internal/ubuntu lunar/main amd64 ca-certificates all 20211016ubuntu1 [141 kB] Get:50 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 xz-utils amd64 5.2.10-0.0 [142 kB] Get:51 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 dpkg-dev all 1.21.12ubuntu2 [1071 kB] Get:52 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libdpkg-perl all 1.21.12ubuntu2 [242 kB] Get:53 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 linux-libc-dev amd64 5.19.0-23.24 [1345 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 85.6 MB in 1s (163 MB/s) (Reading database ... 13639 files and directories currently installed.) Preparing to unpack .../coreutils_9.1-1ubuntu1_amd64.deb ... Unpacking coreutils (9.1-1ubuntu1) over (8.32-4.1ubuntu1) ... Setting up coreutils (9.1-1ubuntu1) ... (Reading database ... 13639 files and directories currently installed.) Preparing to unpack .../dpkg_1.21.12ubuntu2_amd64.deb ... Unpacking dpkg (1.21.12ubuntu2) over (1.21.11ubuntu2) ... Setting up dpkg (1.21.12ubuntu2) ... (Reading database ... 13639 files and directories currently installed.) Preparing to unpack .../dash_0.5.11+git20210903+057cd650a4ed-9ubuntu1_amd64.deb ... Unpacking dash (0.5.11+git20210903+057cd650a4ed-9ubuntu1) over (0.5.11+git20210903+057cd650a4ed-8ubuntu1) ... Setting up dash (0.5.11+git20210903+057cd650a4ed-9ubuntu1) ... (Reading database ... 13639 files and directories currently installed.) Preparing to unpack .../perl_5.36.0-6_amd64.deb ... Unpacking perl (5.36.0-6) over (5.34.0-5ubuntu1) ... Selecting previously unselected package perl-modules-5.36. 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New dpkg-conffile will come from the package. Unpacking adduser (3.129ubuntu1) over (3.121ubuntu1) ... Setting up adduser (3.129ubuntu1) ... Installing new version of config file /etc/deluser.conf ... (Reading database ... 15566 files and directories currently installed.) Preparing to unpack .../0-openssl_3.0.5-2ubuntu2_amd64.deb ... Unpacking openssl (3.0.5-2ubuntu2) over (3.0.5-2ubuntu1) ... Preparing to unpack .../1-ca-certificates_20211016ubuntu1_all.deb ... Unpacking ca-certificates (20211016ubuntu1) over (20211016) ... Preparing to unpack .../2-xz-utils_5.2.10-0.0_amd64.deb ... Unpacking xz-utils (5.2.10-0.0) over (5.2.9-0.0) ... Preparing to unpack .../3-dpkg-dev_1.21.12ubuntu2_all.deb ... Unpacking dpkg-dev (1.21.12ubuntu2) over (1.21.11ubuntu2) ... Preparing to unpack .../4-libdpkg-perl_1.21.12ubuntu2_all.deb ... Unpacking libdpkg-perl (1.21.12ubuntu2) over (1.21.11ubuntu2) ... Preparing to unpack .../5-linux-libc-dev_5.19.0-23.24_amd64.deb ... Unpacking linux-libc-dev:amd64 (5.19.0-23.24) over (5.19.0-21.21) ... Setting up libapparmor1:amd64 (3.0.8-1ubuntu1) ... Setting up cpp-12 (12.2.0-10ubuntu1) ... Setting up binutils-common:amd64 (2.39.50.20221211-0ubuntu1) ... Setting up linux-libc-dev:amd64 (5.19.0-23.24) ... Setting up libctf-nobfd0:amd64 (2.39.50.20221211-0ubuntu1) ... Setting up libgomp1:amd64 (12.2.0-10ubuntu1) ... Setting up libjansson4:amd64 (2.14-2) ... Setting up perl-modules-5.36 (5.36.0-6) ... Setting up xz-utils (5.2.10-0.0) ... Setting up libquadmath0:amd64 (12.2.0-10ubuntu1) ... Setting up libatomic1:amd64 (12.2.0-10ubuntu1) ... Setting up libubsan1:amd64 (12.2.0-10ubuntu1) ... Setting up libasan8:amd64 (12.2.0-10ubuntu1) ... Setting up libtsan2:amd64 (12.2.0-10ubuntu1) ... Setting up libbinutils:amd64 (2.39.50.20221211-0ubuntu1) ... Setting up openssl (3.0.5-2ubuntu2) ... Setting up libcc1-0:amd64 (12.2.0-10ubuntu1) ... Setting up libperl5.36:amd64 (5.36.0-6) ... Setting up liblsan0:amd64 (12.2.0-10ubuntu1) ... Setting up libitm1:amd64 (12.2.0-10ubuntu1) ... Setting up libkmod2:amd64 (30+20220905-1ubuntu1) ... Setting up libctf0:amd64 (2.39.50.20221211-0ubuntu1) ... Setting up ca-certificates (20211016ubuntu1) ... Updating certificates in /etc/ssl/certs... rehash: warning: skipping ca-certificates.crt,it does not contain exactly one certificate or CRL 0 added, 3 removed; done. Setting up perl (5.36.0-6) ... Setting up libgprofng0:amd64 (2.39.50.20221211-0ubuntu1) ... Setting up libgcc-12-dev:amd64 (12.2.0-10ubuntu1) ... Setting up libsystemd-shared:amd64 (252.1-1ubuntu1) ... Setting up libdpkg-perl (1.21.12ubuntu2) ... Setting up binutils-x86-64-linux-gnu (2.39.50.20221211-0ubuntu1) ... Setting up libstdc++-12-dev:amd64 (12.2.0-10ubuntu1) ... Setting up systemd (252.1-1ubuntu1) ... Installing new version of config file /etc/systemd/logind.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from random generator. Setting up binutils (2.39.50.20221211-0ubuntu1) ... Setting up dpkg-dev (1.21.12ubuntu2) ... Setting up gcc-12 (12.2.0-10ubuntu1) ... Setting up g++-12 (12.2.0-10ubuntu1) ... Setting up systemd-sysv (252.1-1ubuntu1) ... Processing triggers for debianutils (5.7-0.4) ... Processing triggers for libc-bin (2.36-0ubuntu4) ... (Reading database ... 15563 files and directories currently installed.) Purging configuration files for lsb-base (11.2ubuntu1) ... Processing triggers for ca-certificates (20211016ubuntu1) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-24939790 amd64 lunar-proposed -c chroot:build-PACKAGEBUILD-24939790 --arch=amd64 --dist=lunar-proposed --nolog -A mpb_1.11.1-5.dsc Initiating build PACKAGEBUILD-24939790 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-135-generic #152-Ubuntu SMP Wed Nov 23 20:19:22 UTC 2022 x86_64 sbuild (Debian sbuild) 0.79.0 (05 February 2020) on lcy02-amd64-013.buildd +==============================================================================+ | mpb 1.11.1-5 (amd64) Thu, 15 Dec 2022 05:22:58 +0000 | +==============================================================================+ Package: mpb Version: 1.11.1-5 Source Version: 1.11.1-5 Distribution: lunar-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: binary I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-24939790/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/mpb-wr2Qdt/resolver-ATL3tW' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- mpb_1.11.1-5.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/mpb-wr2Qdt/mpb-1.11.1' with '<>' I: NOTICE: Log filtering will replace 'build/mpb-wr2Qdt' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), liblapack-dev, libfftw3-dev (>= 3.3), libctl-dev (>= 4.3.0), gfortran, guile-3.0-dev, mpi-default-dev, libhdf5-mpi-dev, libfftw3-mpi-dev, quilt, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 12), liblapack-dev, libfftw3-dev (>= 3.3), libctl-dev (>= 4.3.0), gfortran, guile-3.0-dev, mpi-default-dev, libhdf5-mpi-dev, libfftw3-mpi-dev, quilt, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [439 B] Get:5 copy:/<>/apt_archive ./ Packages [519 B] Fetched 1915 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libperl5.34 perl-modules-5.34 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-strip-nondeterminism diffstat dwz ed file gettext gettext-base gfortran gfortran-12 groff-base guile-3.0 guile-3.0-dev guile-3.0-libs ibverbs-providers intltool-debian libaec-dev libaec0 libarchive-zip-perl libblas-dev libblas3 libbrotli1 libbsd0 libcbor0.8 libctl-dev libctl7 libcurl4 libcurl4-openssl-dev libdebhelper-perl libdw1 libedit2 libelf1 libevent-2.1-7a libevent-core-2.1-7a libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libfido2-1 libfile-stripnondeterminism-perl libgc-dev libgc1 libgfortran-12-dev libgfortran5 libgmp-dev libgmpxx4ldbl libhdf5-mpi-dev libhdf5-openmpi-103-1 libhdf5-openmpi-cpp-103-1 libhdf5-openmpi-dev libhdf5-openmpi-fortran-102 libhdf5-openmpi-hl-100 libhdf5-openmpi-hl-cpp-100 libhdf5-openmpi-hl-fortran-100 libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libicu71 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-jquery-ui liblapack-dev liblapack3 libldap-2.5-0 libltdl-dev libltdl7 libmagic-mgc libmagic1 libmunge2 libncurses-dev libncurses5-dev libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpciaccess0 libpipeline1 libpkgconf3 libpmix-dev libpmix2 libpsl5 libpsm-infinipath1 libpsm2-2 librdmacm1 libreadline-dev librtmp1 libsasl2-2 libsasl2-modules-db libssh-4 libssl-dev libsub-override-perl libsz2 libtool libuchardet0 libucx0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 m4 man-db mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client pkg-config pkgconf pkgconf-bin po-debconf quilt sgml-base zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-12-multilib gfortran-12-doc libcoarrays-dev groff guile-3.0-doc liblapack-doc libcurl4-doc libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev libfftw3-doc gmp-doc libgmp10-doc libmpfr-dev libhdf5-doc libhwloc-contrib-plugins libjs-jquery-ui-docs libtool-doc ncurses-doc openmpi-doc pciutils readline-doc libssl-doc gcj-jdk m4-doc apparmor less www-browser opencl-icd keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl default-mta | mail-transport-agent graphviz procmail sgml-base-doc Recommended packages: curl | wget | lynx libctl-doc libarchive-cpio-perl javascript-common libldap-common libcoarrays-openmpi-dev publicsuffix libsasl2-modules xauth libmail-sendmail-perl less The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper debugedit dh-autoreconf dh-strip-nondeterminism diffstat dwz ed file gettext gettext-base gfortran gfortran-12 groff-base guile-3.0 guile-3.0-dev guile-3.0-libs ibverbs-providers intltool-debian libaec-dev libaec0 libarchive-zip-perl libblas-dev libblas3 libbrotli1 libbsd0 libcbor0.8 libctl-dev libctl7 libcurl4 libcurl4-openssl-dev libdebhelper-perl libdw1 libedit2 libelf1 libevent-2.1-7a libevent-core-2.1-7a libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libfido2-1 libfile-stripnondeterminism-perl libgc-dev libgc1 libgfortran-12-dev libgfortran5 libgmp-dev libgmpxx4ldbl libhdf5-mpi-dev libhdf5-openmpi-103-1 libhdf5-openmpi-cpp-103-1 libhdf5-openmpi-dev libhdf5-openmpi-fortran-102 libhdf5-openmpi-hl-100 libhdf5-openmpi-hl-cpp-100 libhdf5-openmpi-hl-fortran-100 libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libicu71 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-jquery libjs-jquery-ui liblapack-dev liblapack3 libldap-2.5-0 libltdl-dev libltdl7 libmagic-mgc libmagic1 libmunge2 libncurses-dev libncurses5-dev libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpciaccess0 libpipeline1 libpkgconf3 libpmix-dev libpmix2 libpsl5 libpsm-infinipath1 libpsm2-2 librdmacm1 libreadline-dev librtmp1 libsasl2-2 libsasl2-modules-db libssh-4 libssl-dev libsub-override-perl libsz2 libtool libuchardet0 libucx0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 m4 man-db mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client pkg-config pkgconf pkgconf-bin po-debconf quilt sbuild-build-depends-main-dummy sgml-base zlib1g-dev 0 upgraded, 145 newly installed, 0 to remove and 0 not upgraded. Need to get 77.4 MB of archives. After this operation, 334 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [746 B] Get:2 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 sgml-base all 1.31 [11.4 kB] Get:3 http://ftpmaster.internal/ubuntu lunar/main amd64 libbsd0 amd64 0.11.7-1 [43.9 kB] Get:4 http://ftpmaster.internal/ubuntu lunar/main amd64 libelf1 amd64 0.188-1 [51.0 kB] Get:5 http://ftpmaster.internal/ubuntu lunar/main amd64 libicu71 amd64 71.1-3ubuntu1 [10.6 MB] Get:6 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libxml2 amd64 2.9.14+dfsg-1.1 [762 kB] Get:7 http://ftpmaster.internal/ubuntu lunar/main amd64 bsdextrautils amd64 2.38.1-4ubuntu1 [71.0 kB] Get:8 http://ftpmaster.internal/ubuntu lunar/main amd64 ed amd64 1.18-1 [55.7 kB] Get:9 http://ftpmaster.internal/ubuntu lunar/main amd64 libmagic-mgc amd64 1:5.41-4 [257 kB] Get:10 http://ftpmaster.internal/ubuntu lunar/main amd64 libmagic1 amd64 1:5.41-4 [87.3 kB] Get:11 http://ftpmaster.internal/ubuntu lunar/main amd64 file amd64 1:5.41-4 [21.5 kB] Get:12 http://ftpmaster.internal/ubuntu lunar/main amd64 gettext-base amd64 0.21-10 [37.6 kB] Get:13 http://ftpmaster.internal/ubuntu lunar/main amd64 libuchardet0 amd64 0.0.7-1build2 [76.9 kB] Get:14 http://ftpmaster.internal/ubuntu lunar/main amd64 groff-base amd64 1.22.4-9 [937 kB] Get:15 http://ftpmaster.internal/ubuntu lunar/main amd64 libcbor0.8 amd64 0.8.0-2ubuntu1 [24.6 kB] Get:16 http://ftpmaster.internal/ubuntu lunar/main amd64 libedit2 amd64 3.1-20221030-2 [95.2 kB] Get:17 http://ftpmaster.internal/ubuntu lunar/main amd64 libfido2-1 amd64 1.12.0-2 [84.8 kB] Get:18 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libnghttp2-14 amd64 1.51.0-1 [72.1 kB] Get:19 http://ftpmaster.internal/ubuntu lunar/main amd64 libnuma1 amd64 2.0.15-1 [22.3 kB] Get:20 http://ftpmaster.internal/ubuntu lunar/main amd64 libpipeline1 amd64 1.5.7-1 [23.3 kB] Get:21 http://ftpmaster.internal/ubuntu lunar/main amd64 libpsl5 amd64 0.21.0-1.2build2 [58.4 kB] Get:22 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http://ftpmaster.internal/ubuntu lunar/main amd64 debugedit amd64 1:5.0-5 [46.1 kB] Get:44 http://ftpmaster.internal/ubuntu lunar/main amd64 dwz amd64 0.14+20220924-2 [112 kB] Get:45 http://ftpmaster.internal/ubuntu lunar/main amd64 gettext amd64 0.21-10 [867 kB] Get:46 http://ftpmaster.internal/ubuntu lunar/main amd64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:47 http://ftpmaster.internal/ubuntu lunar/main amd64 po-debconf all 1.0.21+nmu1 [233 kB] Get:48 http://ftpmaster.internal/ubuntu lunar/main amd64 debhelper all 13.10.1ubuntu1 [924 kB] Get:49 http://ftpmaster.internal/ubuntu lunar/main amd64 diffstat amd64 1.64-1build2 [29.2 kB] Get:50 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libgfortran5 amd64 12.2.0-10ubuntu1 [877 kB] Get:51 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libgfortran-12-dev amd64 12.2.0-10ubuntu1 [929 kB] Get:52 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 gfortran-12 amd64 12.2.0-10ubuntu1 [11.1 MB] Get:53 http://ftpmaster.internal/ubuntu lunar/main amd64 gfortran amd64 4:12.2.0-1ubuntu1 [1178 B] Get:54 http://ftpmaster.internal/ubuntu lunar/main amd64 libgc1 amd64 1:8.2.2-3 [89.7 kB] Get:55 http://ftpmaster.internal/ubuntu lunar/main amd64 guile-3.0-libs amd64 3.0.8-2 [7592 kB] Get:56 http://ftpmaster.internal/ubuntu lunar/main amd64 guile-3.0 amd64 3.0.8-2 [7352 B] Get:57 http://ftpmaster.internal/ubuntu lunar/main amd64 libncurses-dev amd64 6.3+20220423-2 [379 kB] Get:58 http://ftpmaster.internal/ubuntu lunar/main amd64 libncurses5-dev amd64 6.3+20220423-2 [792 B] Get:59 http://ftpmaster.internal/ubuntu lunar/main amd64 libreadline-dev amd64 8.2-1.2 [167 kB] Get:60 http://ftpmaster.internal/ubuntu lunar/main amd64 libltdl7 amd64 2.4.7-5 [40.3 kB] Get:61 http://ftpmaster.internal/ubuntu lunar/main amd64 libltdl-dev amd64 2.4.7-5 [169 kB] Get:62 http://ftpmaster.internal/ubuntu lunar/main amd64 libgmpxx4ldbl amd64 2:6.2.1+dfsg1-1.1ubuntu1 [9988 B] Get:63 http://ftpmaster.internal/ubuntu 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lunar/main amd64 ibverbs-providers amd64 43.0-1 [360 kB] Get:74 http://ftpmaster.internal/ubuntu lunar/universe amd64 libaec0 amd64 1.0.6-1 [20.1 kB] Get:75 http://ftpmaster.internal/ubuntu lunar/main amd64 libblas3 amd64 3.11.0-2 [244 kB] Get:76 http://ftpmaster.internal/ubuntu lunar/main amd64 libblas-dev amd64 3.11.0-2 [170 kB] Get:77 http://ftpmaster.internal/ubuntu lunar/main amd64 libbrotli1 amd64 1.0.9-2build7 [309 kB] Get:78 http://ftpmaster.internal/ubuntu lunar/universe amd64 libctl7 amd64 4.5.1-2 [122 kB] Get:79 http://ftpmaster.internal/ubuntu lunar/universe amd64 libctl-dev amd64 4.5.1-2 [105 kB] Get:80 http://ftpmaster.internal/ubuntu lunar/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-6ubuntu2 [20.3 kB] Get:81 http://ftpmaster.internal/ubuntu lunar/main amd64 libsasl2-2 amd64 2.1.28+dfsg-6ubuntu2 [56.6 kB] Get:82 http://ftpmaster.internal/ubuntu lunar/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-1ubuntu1 [183 kB] Get:83 http://ftpmaster.internal/ubuntu lunar/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2build4 [58.2 kB] Get:84 http://ftpmaster.internal/ubuntu lunar/main amd64 libssh-4 amd64 0.10.4-2 [185 kB] Get:85 http://ftpmaster.internal/ubuntu lunar/main amd64 libcurl4 amd64 7.86.0-2 [293 kB] Get:86 http://ftpmaster.internal/ubuntu lunar/main amd64 libcurl4-openssl-dev amd64 7.86.0-2 [395 kB] Get:87 http://ftpmaster.internal/ubuntu lunar/main amd64 libevent-2.1-7a amd64 2.1.12-stable-5ubuntu1 [144 kB] Get:88 http://ftpmaster.internal/ubuntu lunar/main amd64 libevent-core-2.1-7a amd64 2.1.12-stable-5ubuntu1 [91.2 kB] Get:89 http://ftpmaster.internal/ubuntu lunar/main amd64 libevent-extra-2.1-7 amd64 2.1.12-stable-5ubuntu1 [64.2 kB] Get:90 http://ftpmaster.internal/ubuntu lunar/main amd64 libevent-pthreads-2.1-7 amd64 2.1.12-stable-5ubuntu1 [7694 B] Get:91 http://ftpmaster.internal/ubuntu lunar/main amd64 libevent-openssl-2.1-7 amd64 2.1.12-stable-5ubuntu1 [15.4 kB] Get:92 http://ftpmaster.internal/ubuntu lunar/main amd64 libevent-dev amd64 2.1.12-stable-5ubuntu1 [275 kB] Get:93 http://ftpmaster.internal/ubuntu lunar/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.2 [181 kB] Get:94 http://ftpmaster.internal/ubuntu lunar/universe amd64 libpsm2-2 amd64 11.2.185-2 [196 kB] Get:95 http://ftpmaster.internal/ubuntu lunar/main amd64 librdmacm1 amd64 43.0-1 [69.9 kB] Get:96 http://ftpmaster.internal/ubuntu lunar/universe amd64 libfabric1 amd64 1.11.0-3 [558 kB] Get:97 http://ftpmaster.internal/ubuntu lunar/main amd64 libfftw3-double3 amd64 3.3.8-2ubuntu8 [770 kB] Get:98 http://ftpmaster.internal/ubuntu lunar/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu8 [335 kB] Get:99 http://ftpmaster.internal/ubuntu lunar/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu8 [614 kB] Get:100 http://ftpmaster.internal/ubuntu lunar/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu8 [800 kB] Get:101 http://ftpmaster.internal/ubuntu lunar/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu8 [35.5 kB] Get:102 http://ftpmaster.internal/ubuntu lunar/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu8 [2101 kB] Get:103 http://ftpmaster.internal/ubuntu lunar-proposed/universe amd64 libhwloc15 amd64 2.9.0-1 [161 kB] Get:104 http://ftpmaster.internal/ubuntu lunar/universe amd64 libmunge2 amd64 0.5.14-6 [15.7 kB] Get:105 http://ftpmaster.internal/ubuntu lunar/main amd64 libpciaccess0 amd64 0.17-2 [18.5 kB] Get:106 http://ftpmaster.internal/ubuntu lunar/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu1 [11.5 kB] Get:107 http://ftpmaster.internal/ubuntu lunar/universe amd64 ocl-icd-libopencl1 amd64 2.3.1-1 [37.6 kB] Get:108 http://ftpmaster.internal/ubuntu lunar-proposed/universe amd64 libhwloc-plugins amd64 2.9.0-1 [15.8 kB] Get:109 http://ftpmaster.internal/ubuntu lunar/universe amd64 libpmix2 amd64 4.2.2-1 [656 kB] Get:110 http://ftpmaster.internal/ubuntu lunar/universe amd64 libucx0 amd64 1.13.1-1 [911 kB] Get:111 http://ftpmaster.internal/ubuntu lunar/universe amd64 libopenmpi3 amd64 4.1.4-3ubuntu1 [2582 kB] Get:112 http://ftpmaster.internal/ubuntu lunar/universe amd64 libfftw3-mpi3 amd64 3.3.8-2ubuntu8 [48.9 kB] Get:113 http://ftpmaster.internal/ubuntu lunar/universe amd64 libfftw3-mpi-dev amd64 3.3.8-2ubuntu8 [53.3 kB] Get:114 http://ftpmaster.internal/ubuntu lunar/universe amd64 libsz2 amd64 1.0.6-1 [5354 B] Get:115 http://ftpmaster.internal/ubuntu lunar/universe amd64 libhdf5-openmpi-103-1 amd64 1.10.8+repack-1ubuntu1 [1347 kB] Get:116 http://ftpmaster.internal/ubuntu lunar/universe amd64 libhdf5-openmpi-cpp-103-1 amd64 1.10.8+repack-1ubuntu1 [123 kB] Get:117 http://ftpmaster.internal/ubuntu lunar/universe amd64 libhdf5-openmpi-fortran-102 amd64 1.10.8+repack-1ubuntu1 [84.9 kB] Get:118 http://ftpmaster.internal/ubuntu lunar/universe amd64 libhdf5-openmpi-hl-100 amd64 1.10.8+repack-1ubuntu1 [56.0 kB] Get:119 http://ftpmaster.internal/ubuntu lunar/universe amd64 libhdf5-openmpi-hl-cpp-100 amd64 1.10.8+repack-1ubuntu1 [10.7 kB] Get:120 http://ftpmaster.internal/ubuntu lunar/universe amd64 libhdf5-openmpi-hl-fortran-100 amd64 1.10.8+repack-1ubuntu1 [32.1 kB] Get:121 http://ftpmaster.internal/ubuntu lunar/main amd64 libjpeg-turbo8 amd64 2.1.2-0ubuntu1 [134 kB] Get:122 http://ftpmaster.internal/ubuntu lunar/main amd64 libjpeg-turbo8-dev amd64 2.1.2-0ubuntu1 [257 kB] Get:123 http://ftpmaster.internal/ubuntu lunar/main amd64 libjpeg8 amd64 8c-2ubuntu10 [2264 B] Get:124 http://ftpmaster.internal/ubuntu lunar/main amd64 libjpeg8-dev amd64 8c-2ubuntu10 [1476 B] Get:125 http://ftpmaster.internal/ubuntu lunar/main amd64 libjpeg-dev amd64 8c-2ubuntu10 [1472 B] Get:126 http://ftpmaster.internal/ubuntu lunar/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] Get:127 http://ftpmaster.internal/ubuntu lunar/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] Get:128 http://ftpmaster.internal/ubuntu lunar/main amd64 liblapack3 amd64 3.11.0-2 [2659 kB] Get:129 http://ftpmaster.internal/ubuntu lunar/main amd64 liblapack-dev amd64 3.11.0-2 [5073 kB] Get:130 http://ftpmaster.internal/ubuntu lunar/main amd64 libnl-3-dev amd64 3.7.0-0.2 [101 kB] Get:131 http://ftpmaster.internal/ubuntu lunar/main amd64 libnl-route-3-dev amd64 3.7.0-0.2 [216 kB] Get:132 http://ftpmaster.internal/ubuntu lunar/main amd64 libnuma-dev amd64 2.0.15-1 [36.4 kB] Get:133 http://ftpmaster.internal/ubuntu lunar-proposed/universe amd64 libhwloc-dev amd64 2.9.0-1 [258 kB] Get:134 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1ubuntu3 [895 kB] Get:135 http://ftpmaster.internal/ubuntu lunar/universe amd64 libpmix-dev amd64 4.2.2-1 [978 kB] Get:136 http://ftpmaster.internal/ubuntu lunar-proposed/main amd64 libssl-dev amd64 3.0.5-2ubuntu2 [2375 kB] Get:137 http://ftpmaster.internal/ubuntu lunar/universe amd64 openmpi-common all 4.1.4-3ubuntu1 [163 kB] Get:138 http://ftpmaster.internal/ubuntu lunar/universe amd64 openmpi-bin amd64 4.1.4-3ubuntu1 [115 kB] Get:139 http://ftpmaster.internal/ubuntu lunar/universe amd64 quilt all 0.66-2.2 [306 kB] Get:140 http://ftpmaster.internal/ubuntu lunar/universe amd64 libaec-dev amd64 1.0.6-1 [17.9 kB] Get:141 http://ftpmaster.internal/ubuntu lunar/main amd64 libibverbs-dev amd64 43.0-1 [661 kB] Get:142 http://ftpmaster.internal/ubuntu lunar/universe amd64 libopenmpi-dev amd64 4.1.4-3ubuntu1 [864 kB] Get:143 http://ftpmaster.internal/ubuntu lunar/universe amd64 libhdf5-openmpi-dev amd64 1.10.8+repack-1ubuntu1 [2869 kB] Get:144 http://ftpmaster.internal/ubuntu lunar/universe amd64 mpi-default-dev amd64 1.14 [3698 B] Get:145 http://ftpmaster.internal/ubuntu lunar/universe amd64 libhdf5-mpi-dev amd64 1.10.8+repack-1ubuntu1 [4600 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 77.4 MB in 1s (139 MB/s) Selecting previously unselected package sgml-base. 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Setting up libevent-2.1-7a:amd64 (2.1.12-stable-5ubuntu1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg-6ubuntu2) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libpkgconf3:amd64 (1.8.0-11) ... Setting up libgmpxx4ldbl:amd64 (2:6.2.1+dfsg1-1.1ubuntu1) ... Setting up libmunge2 (0.5.14-6) ... Setting up libx11-data (2:1.8.1-2) ... Setting up ed (1.18-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2build4) ... Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu8) ... Setting up diffstat (1.64-1build2) ... Setting up libssl-dev:amd64 (3.0.5-2ubuntu2) ... Setting up libhwloc15:amd64 (2.9.0-1) ... Setting up autopoint (0.21-10) ... Setting up pkgconf-bin (1.8.0-11) ... Setting up libjpeg-turbo8:amd64 (2.1.2-0ubuntu1) ... Setting up libgc1:amd64 (1:8.2.2-3) ... Setting up libltdl7:amd64 (2.4.7-5) ... Setting up libfftw3-double3:amd64 (3.3.8-2ubuntu8) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-6ubuntu2) ... Setting up libssh-4:amd64 (0.10.4-2) ... Setting up libgfortran5:amd64 (12.2.0-10ubuntu1) ... Setting up autoconf (2.71-2) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1ubuntu3) ... Setting up libnuma1:amd64 (2.0.15-1) ... Setting up ocl-icd-libopencl1:amd64 (2.3.1-1) ... Setting up libuchardet0:amd64 (0.0.7-1build2) ... Setting up libncurses5-dev:amd64 (6.3+20220423-2) ... Setting up libpsm2-2 (11.2.185-2) ... Setting up openmpi-common (4.1.4-3ubuntu1) ... Setting up libsub-override-perl (0.09-4) ... Setting up sgml-base (1.31) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.2) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:amd64 (1.12.0-2) ... Setting up libgc-dev:amd64 (1:8.2.2-3) ... Setting up libbsd0:amd64 (0.11.7-1) ... Setting up libelf1:amd64 (0.188-1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.1) ... Setting up libblas-dev:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libsz2:amd64 (1.0.6-1) ... Setting up libevent-pthreads-2.1-7:amd64 (2.1.12-stable-5ubuntu1) ... Setting up libjpeg8:amd64 (8c-2ubuntu10) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.0-2) ... Setting up libdw1:amd64 (0.188-1) ... Setting up libjpeg-turbo8-dev:amd64 (2.1.2-0ubuntu1) ... Setting up libxdmcp6:amd64 (1:1.1.3-0ubuntu5) ... Setting up libevent-extra-2.1-7:amd64 (2.1.12-stable-5ubuntu1) ... Setting up liblapack3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.15-1) ... Setting up gettext (0.21-10) ... Setting up libgmp-dev:amd64 (2:6.2.1+dfsg1-1.1ubuntu1) ... Setting up libtool (2.4.7-5) ... Setting up guile-3.0-libs:amd64 (3.0.8-2) ... Setting up libfftw3-bin (3.3.8-2ubuntu8) ... Setting up libedit2:amd64 (3.1-20221030-2) ... Setting up libaec-dev:amd64 (1.0.6-1) ... Setting up quilt (0.66-2.2) ... Setting up libgfortran-12-dev:amd64 (12.2.0-10ubuntu1) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-1ubuntu1) ... Setting up pkgconf:amd64 (1.8.0-11) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:amd64 (2.0.15-1) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:amd64 (2.4.7-5) ... Setting up libctl7:amd64 (4.5.1-2) ... Setting up gfortran-12 (12.2.0-10ubuntu1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libevent-dev (2.1.12-stable-5ubuntu1) ... Setting up liblapack-dev:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up pkg-config:amd64 (1.8.0-11) ... Setting up dh-strip-nondeterminism (1.13.0-2) ... Setting up dwz (0.14+20220924-2) ... Setting up groff-base (1.22.4-9) ... Setting up libnl-3-200:amd64 (3.7.0-0.2) ... Setting up debugedit (1:5.0-5) ... Setting up libcurl4:amd64 (7.86.0-2) ... Setting up libx11-6:amd64 (2:1.8.1-2) ... Setting up libhwloc-dev:amd64 (2.9.0-1) ... Setting up libjpeg8-dev:amd64 (8c-2ubuntu10) ... Setting up guile-3.0 (3.0.8-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/guile/3.0/bin/guile to provide /usr/bin/guile (guile) in auto mode Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu8) ... Setting up openssh-client (1:9.0p1-1ubuntu8) ... update-alternatives: using /usr/bin/ssh to provide /usr/bin/rsh (rsh) in auto mode update-alternatives: using /usr/bin/slogin to provide /usr/bin/rlogin (rlogin) in auto mode update-alternatives: using /usr/bin/scp to provide /usr/bin/rcp (rcp) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up libjpeg-dev:amd64 (8c-2ubuntu10) ... Setting up libxext6:amd64 (2:1.3.4-1build1) ... Setting up man-db (2.11.1-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up gfortran (4:12.2.0-1ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libnl-route-3-200:amd64 (3.7.0-0.2) ... Setting up libxnvctrl0:amd64 (510.47.03-0ubuntu1) ... Setting up libcurl4-openssl-dev (7.86.0-2) ... Setting up libnl-3-dev:amd64 (3.7.0-0.2) ... Setting up guile-3.0-dev (3.0.8-2) ... update-alternatives: using /usr/bin/guile-config-3.0 to provide /usr/bin/guile-config (guile-config) in auto mode update-alternatives: using /usr/share/aclocal/guile-3.0.m4 to provide /usr/share/aclocal/guile.m4 (guile-autoconf-macros) in auto mode Setting up libibverbs1:amd64 (43.0-1) ... Setting up ibverbs-providers:amd64 (43.0-1) ... Setting up debhelper (13.10.1ubuntu1) ... Setting up libhwloc-plugins:amd64 (2.9.0-1) ... Setting up libctl-dev:amd64 (4.5.1-2) ... Setting up libnl-route-3-dev:amd64 (3.7.0-0.2) ... Setting up librdmacm1:amd64 (43.0-1) ... Setting up libucx0:amd64 (1.13.1-1) ... Setting up libpmix2:amd64 (4.2.2-1) ... Setting up libibverbs-dev:amd64 (43.0-1) ... Setting up libpmix-dev:amd64 (4.2.2-1) ... Setting up libfabric1:amd64 (1.11.0-3) ... Setting up libopenmpi3:amd64 (4.1.4-3ubuntu1) ... Setting up libfftw3-mpi3:amd64 (3.3.8-2ubuntu8) ... Setting up openmpi-bin (4.1.4-3ubuntu1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libhdf5-openmpi-103-1:amd64 (1.10.8+repack-1ubuntu1) ... Setting up libfftw3-mpi-dev:amd64 (3.3.8-2ubuntu8) ... Setting up libhdf5-openmpi-fortran-102:amd64 (1.10.8+repack-1ubuntu1) ... Setting up libhdf5-openmpi-hl-100:amd64 (1.10.8+repack-1ubuntu1) ... Setting up libopenmpi-dev:amd64 (4.1.4-3ubuntu1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libhdf5-openmpi-cpp-103-1:amd64 (1.10.8+repack-1ubuntu1) ... Setting up libhdf5-openmpi-hl-cpp-100:amd64 (1.10.8+repack-1ubuntu1) ... Setting up libhdf5-openmpi-hl-fortran-100:amd64 (1.10.8+repack-1ubuntu1) ... Setting up mpi-default-dev (1.14) ... Setting up libhdf5-openmpi-dev (1.10.8+repack-1ubuntu1) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libhdf5-mpi-dev (1.10.8+repack-1ubuntu1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.36-0ubuntu4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-135-generic #152-Ubuntu SMP Wed Nov 23 20:19:22 UTC 2022 amd64 (x86_64) Toolchain package versions: binutils_2.39.50.20221211-0ubuntu1 dpkg-dev_1.21.12ubuntu2 g++-12_12.2.0-10ubuntu1 gcc-12_12.2.0-10ubuntu1 libc6-dev_2.36-0ubuntu4 libstdc++-12-dev_12.2.0-10ubuntu1 libstdc++6_12.2.0-10ubuntu1 linux-libc-dev_5.19.0-23.24 Package versions: adduser_3.129ubuntu1 advancecomp_2.4-1 apt_2.5.4 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3ubuntu1 base-passwd_3.6.1 bash_5.2-1ubuntu2 binutils_2.39.50.20221211-0ubuntu1 binutils-common_2.39.50.20221211-0ubuntu1 binutils-x86-64-linux-gnu_2.39.50.20221211-0ubuntu1 bsdextrautils_2.38.1-4ubuntu1 bsdutils_1:2.38.1-4ubuntu1 build-essential_12.9ubuntu3 bzip2_1.0.8-5build1 ca-certificates_20211016ubuntu1 coreutils_9.1-1ubuntu1 cpp_4:12.2.0-1ubuntu1 cpp-12_12.2.0-10ubuntu1 dash_0.5.11+git20210903+057cd650a4ed-9ubuntu1 debconf_1.5.80 debhelper_13.10.1ubuntu1 debianutils_5.7-0.4 debugedit_1:5.0-5 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-2 diffstat_1.64-1build2 diffutils_1:3.8-1 dpkg_1.21.12ubuntu2 dpkg-dev_1.21.12ubuntu2 dwz_0.14+20220924-2 e2fsprogs_1.46.6~rc1-1ubuntu1 ed_1.18-1 fakeroot_1.30.1-1ubuntu1 file_1:5.41-4 findutils_4.9.0-3ubuntu1 g++_4:12.2.0-1ubuntu1 g++-12_12.2.0-10ubuntu1 gcc_4:12.2.0-1ubuntu1 gcc-12_12.2.0-10ubuntu1 gcc-12-base_12.2.0-10ubuntu1 gettext_0.21-10 gettext-base_0.21-10 gfortran_4:12.2.0-1ubuntu1 gfortran-12_12.2.0-10ubuntu1 gpg_2.2.40-1ubuntu1 gpg-agent_2.2.40-1ubuntu1 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(= 12), liblapack-dev, libfftw3-dev (>= 3.3), libctl-dev (>= 4.3.0), gfortran, guile-3.0-dev, mpi-default-dev, libhdf5-mpi-dev, libfftw3-mpi-dev, quilt Package-List: mpb deb science optional arch=any mpb-dev deb devel optional arch=any mpb-doc deb doc optional arch=all mpb-mpi deb science optional arch=any mpb-scm deb science optional arch=all Checksums-Sha1: 4dbe1eb411ee98e1c7e446d0ec5d90190e19607f 1338549 mpb_1.11.1.orig.tar.gz ee6f6c8c9ba0228d62614c0669c0c1355fe578fa 145224 mpb_1.11.1-5.debian.tar.xz Checksums-Sha256: 7311fc525214c1184cad3e0626b8540c0b53b3c31c28e61ce6ec2860088eca46 1338549 mpb_1.11.1.orig.tar.gz 98f71c87a5cf1c278c071fd0bc7c18e260448c854154d218c10ebd6be713c2c5 145224 mpb_1.11.1-5.debian.tar.xz Files: 5fbcafd1a54c4d9a2dc6ec7f0e84e745 1338549 mpb_1.11.1.orig.tar.gz 4316e77d6e9c938719d5680e7a13698f 145224 mpb_1.11.1-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQKnBAEBCgCRFiEEYgH7/9u94Hgi6ruWlvysDTh7WEcFAmOaYLNfFIAAAAAALgAo 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6201FBFFDBBDE07822EABB9696FCAC0D387B5847 gpgv: issuer "debian@alteholz.de" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./mpb_1.11.1-5.dsc: no acceptable signature found dpkg-source: info: extracting mpb in /<> dpkg-source: info: unpacking mpb_1.11.1.orig.tar.gz dpkg-source: info: unpacking mpb_1.11.1-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 14-mpb-mpb.1.patch dpkg-source: info: applying 15-mpb-mpb-split.1.patch dpkg-source: info: applying 16-utils-mpb-data.1.patch dpkg-source: info: applying zzz-blas-problem-on-mipsel.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-24939790 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-24939790 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-24939790 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -b -rfakeroot dpkg-buildpackage: info: source package mpb dpkg-buildpackage: info: source version 1.11.1-5 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with autoreconf debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean rm -f config.log config.sub config.guess config.cache ../config.cache rm -f mpb/mpb rm -f mpb/mpb-split rm -f mpb/mpbi-split rm -f utils/mpb-data rm -f src/mpb.h rm -f src/mpbi.h rm -f src/mpb_mpi.h rm -f src/mpbi_mpi.h rm -f src/libmpb.la rm -rf debian/build-tmp make[1]: Leaving directory '/<>' debian/rules binary dh binary --with autoreconf dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:4: warning: The macro `AC_CONFIG_HEADER' is obsolete. configure.ac:4: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:23: warning: The macro `AM_ENABLE_SHARED' is obsolete. configure.ac:23: You should run autoupdate. m4/ltoptions.m4:205: AM_ENABLE_SHARED is expanded from... configure.ac:23: the top level configure.ac:24: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:24: You should run autoupdate. m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from... configure.ac:24: the top level configure.ac:39: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:39: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:39: the top level configure.ac:45: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:45: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:45: the top level configure.ac:51: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:51: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:51: the top level configure.ac:57: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:57: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:57: the top level configure.ac:62: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:62: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:62: the top level configure.ac:68: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:68: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:68: the top level configure.ac:73: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:73: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:73: the top level configure.ac:86: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:86: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:86: the top level configure.ac:103: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:103: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:103: the top level configure.ac:124: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:124: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:124: the top level configure.ac:125: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:125: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:125: the top level configure.ac:170: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:170: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:170: the top level configure.ac:201: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.ac:201: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... m4/ax_mpi.m4:69: AX_MPI is expanded from... configure.ac:201: the top level configure.ac:258: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:258: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:258: the top level configure.ac:277: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:277: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:277: the top level configure.ac:324: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:324: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:324: the top level configure.ac:337: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:337: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:337: the top level configure.ac:350: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:350: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:350: the top level configure.ac:512: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:512: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:512: the top level configure.ac:562: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.ac:562: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... configure.ac:562: the top level configure.ac:24: installing './compile' configure.ac:24: installing './config.guess' configure.ac:24: installing './config.sub' configure.ac:20: installing './install-sh' configure.ac:20: installing './missing' mpb/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' # we build 4 binaries and need to reconfigure for each # so nothing done here make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build make[1]: Entering directory '/<>' echo amd64 amd64 # there is a problem with zdotc on mipsel # so deactivate the last patch except # on mipsel quilt pop Removing patch debian/patches/zzz-blas-problem-on-mipsel.patch Restoring configure.ac Now at patch debian/patches/16-utils-mpb-data.1.patch # normal version echo "Step1: normal version start" Step1: normal version start #XXX dh_auto_configure -- --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode F77=gfortran CC=mpicc SH_JOB=/bin/bash ./configure --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode configure: creating cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether mpicc accepts -g... yes checking for mpicc option to enable C11 features... none needed checking whether mpicc understands -c and -o together... yes checking dependency style of mpicc... gcc3 checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... no checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether the compiler supports GNU Fortran 77... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... mpicc checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for sqrt in -lm... yes checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for sgemm_ in -lmkl... no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for deflate in -lz... yes checking for H5Pcreate in -lhdf5... yes checking for hdf5.h... yes checking for guile... yes checking for guile-config... guile-config checking if linking to guile works... yes checking for libguile.h... yes checking for guile/gh.h... no checking for scm_make_smob_type... yes checking for scm_array_get_handle... yes checking for scm_is_array... yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... gen-ctl-io checking for ctl_get_vector3 in -lctl... yes checking for ctl.h... yes checking whether libctl version is at least 4.0.0... checking how to run the C preprocessor... mpicc -E ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... yes checking for ctlgeom.h... yes checking for nlopt.h... no checking for nlopt_minimize in -lnlopt... no checking for egrep... (cached) /usr/bin/grep -E checking for unistd.h... (cached) yes checking for getopt.h... yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... yes checking for inline... inline checking for getopt... yes checking for strncmp... yes checking for bash... /bin/bash checking for feenableexcept... yes checking whether feenableexcept declaration is usable... yes configure: updating cache ../config.cache checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: executing depfiles commands config.status: executing libtool commands cat config.log This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by mpb configure 1.11.1, which was generated by GNU Autoconf 2.71. Invocation command line was $ ./configure --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr '--mandir=${prefix}/share/man' --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode ## --------- ## ## Platform. ## ## --------- ## hostname = lcy02-amd64-013 uname -m = x86_64 uname -r = 5.4.0-135-generic uname -s = Linux uname -v = #152-Ubuntu SMP Wed Nov 23 20:19:22 UTC 2022 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/local/sbin/ PATH: /usr/local/bin/ PATH: /usr/sbin/ PATH: /usr/bin/ PATH: /sbin/ PATH: /bin/ PATH: /usr/games/ ## ----------- ## ## Core tests. ## ## ----------- ## configure:2221: creating cache ../config.cache configure:2557: looking for aux files: compile config.guess config.sub ltmain.sh missing install-sh configure:2570: trying ./ configure:2599: ./compile found configure:2599: ./config.guess found configure:2599: ./config.sub found configure:2599: ./ltmain.sh found configure:2599: ./missing found configure:2581: ./install-sh found configure:2715: checking whether to enable maintainer-specific portions of Makefiles configure:2725: result: yes configure:2775: checking for a BSD-compatible install configure:2848: result: /usr/bin/install -c configure:2859: checking whether build environment is sane configure:2914: result: yes configure:3073: checking for a race-free mkdir -p configure:3117: result: /usr/bin/mkdir -p configure:3124: checking for gawk configure:3159: result: no configure:3124: checking for mawk configure:3145: found /usr/bin/mawk configure:3156: result: mawk configure:3167: checking whether make sets $(MAKE) configure:3190: result: yes configure:3220: checking whether make supports nested variables configure:3238: result: yes configure:3386: checking whether make supports nested variables configure:3404: result: yes configure:3479: checking build system type configure:3494: result: x86_64-pc-linux-gnu configure:3514: checking host system type configure:3528: result: x86_64-pc-linux-gnu configure:3569: checking how to print strings configure:3596: result: printf configure:3630: checking whether make supports the include directive configure:3645: make -f confmf.GNU && cat confinc.out make[2]: Entering directory '/<>' make[2]: Leaving directory '/<>' this is the am__doit target configure:3648: $? = 0 configure:3667: result: yes (GNU style) configure:3743: checking for gcc configure:3775: result: mpicc configure:4128: checking for C compiler version configure:4137: mpicc --version >&5 gcc (Ubuntu 12.2.0-10ubuntu1) 12.2.0 Copyright (C) 2022 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:4148: $? = 0 configure:4137: mpicc -v >&5 Using built-in specs. COLLECT_GCC=/usr/bin/gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/12/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu 12.2.0-10ubuntu1' --with-bugurl=file:///usr/share/doc/gcc-12/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-12 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-12-h1d971/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-h1d971/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-offload-defaulted --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 12.2.0 (Ubuntu 12.2.0-10ubuntu1) ... rest of stderr output deleted ... configure:4148: $? = 0 configure:4137: mpicc -V >&5 gcc: error: unrecognized command-line option '-V' gcc: fatal error: no input files compilation terminated. configure:4148: $? = 1 configure:4137: mpicc -qversion >&5 gcc: error: unrecognized command-line option '-qversion'; did you mean '--version'? gcc: fatal error: no input files compilation terminated. configure:4148: $? = 1 configure:4137: mpicc -version >&5 gcc: error: unrecognized command-line option '-version' gcc: fatal error: no input files compilation terminated. configure:4148: $? = 1 configure:4168: checking whether the C compiler works configure:4190: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c >&5 configure:4194: $? = 0 configure:4244: result: yes configure:4247: checking for C compiler default output file name configure:4249: result: a.out configure:4255: checking for suffix of executables configure:4262: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c >&5 configure:4266: $? = 0 configure:4289: result: configure:4311: checking whether we are cross compiling configure:4319: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c >&5 configure:4323: $? = 0 configure:4330: ./conftest configure:4334: $? = 0 configure:4349: result: no configure:4354: checking for suffix of object files configure:4377: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:4381: $? = 0 configure:4403: result: o configure:4407: checking whether the compiler supports GNU C configure:4427: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:4427: $? = 0 configure:4437: result: yes configure:4448: checking whether mpicc accepts -g configure:4469: mpicc -c -g -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:4469: $? = 0 configure:4513: result: yes configure:4533: checking for mpicc option to enable C11 features configure:4548: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:4548: $? = 0 configure:4566: result: none needed configure:4682: checking whether mpicc understands -c and -o together configure:4705: mpicc -c conftest.c -o conftest2.o configure:4708: $? = 0 configure:4705: mpicc -c conftest.c -o conftest2.o configure:4708: $? = 0 configure:4720: result: yes configure:4739: checking dependency style of mpicc configure:4851: result: gcc3 configure:4866: checking for a sed that does not truncate output configure:4936: result: /usr/bin/sed configure:4954: checking for grep that handles long lines and -e configure:5018: result: /usr/bin/grep configure:5023: checking for egrep configure:5091: result: /usr/bin/grep -E configure:5096: checking for fgrep configure:5164: result: /usr/bin/grep -F configure:5200: checking for ld used by mpicc configure:5268: result: /usr/bin/ld configure:5275: checking if the linker (/usr/bin/ld) is GNU ld configure:5291: result: yes configure:5303: checking for BSD- or MS-compatible name lister (nm) configure:5358: result: /usr/bin/nm -B configure:5498: checking the name lister (/usr/bin/nm -B) interface configure:5506: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:5509: /usr/bin/nm -B "conftest.o" configure:5512: output 00000000 B some_variable configure:5519: result: BSD nm configure:5522: checking whether ln -s works configure:5526: result: yes configure:5534: checking the maximum length of command line arguments configure:5666: result: 1572864 configure:5714: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:5755: result: func_convert_file_noop configure:5762: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:5783: result: func_convert_file_noop configure:5790: checking for /usr/bin/ld option to reload object files configure:5798: result: -r configure:5877: checking for file configure:5898: found /usr/bin/file configure:5909: result: file configure:5985: checking for objdump configure:6006: found /usr/bin/objdump configure:6017: result: objdump configure:6049: checking how to recognize dependent libraries configure:6250: result: pass_all configure:6340: checking for dlltool configure:6375: result: no configure:6405: checking how to associate runtime and link libraries configure:6433: result: printf %s\n configure:6499: checking for ar configure:6520: found /usr/bin/ar configure:6531: result: ar configure:6584: checking for archiver @FILE support configure:6602: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:6602: $? = 0 configure:6606: ar cr libconftest.a @conftest.lst >&5 configure:6609: $? = 0 configure:6614: ar cr libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:6617: $? = 1 configure:6629: result: @ configure:6692: checking for strip configure:6713: found /usr/bin/strip configure:6724: result: strip configure:6801: checking for ranlib configure:6822: found /usr/bin/ranlib configure:6833: result: ranlib configure:6935: checking command to parse /usr/bin/nm -B output from mpicc object configure:7089: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:7092: $? = 0 configure:7096: /usr/bin/nm -B conftest.o | /usr/bin/sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | /usr/bin/sed '/ __gnu_lto/d' > conftest.nm configure:7162: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c conftstm.o >&5 configure:7165: $? = 0 configure:7203: result: ok configure:7250: checking for sysroot configure:7281: result: no configure:7288: checking for a working dd configure:7332: result: /usr/bin/dd configure:7336: checking how to truncate binary pipes configure:7352: result: /usr/bin/dd bs=4096 count=1 configure:7489: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:7492: $? = 0 configure:7689: checking for mt configure:7724: result: no configure:7744: checking if : is a manifest tool configure:7751: : '-?' configure:7759: result: no configure:8484: checking for stdio.h configure:8484: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8484: $? = 0 configure:8484: result: yes configure:8484: checking for stdlib.h configure:8484: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8484: $? = 0 configure:8484: result: yes configure:8484: checking for string.h configure:8484: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8484: $? = 0 configure:8484: result: yes configure:8484: checking for inttypes.h configure:8484: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8484: $? = 0 configure:8484: result: yes configure:8484: checking for stdint.h configure:8484: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8484: $? = 0 configure:8484: result: yes configure:8484: checking for strings.h configure:8484: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8484: $? = 0 configure:8484: result: yes configure:8484: checking for sys/stat.h configure:8484: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8484: $? = 0 configure:8484: result: yes configure:8484: checking for sys/types.h configure:8484: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8484: $? = 0 configure:8484: result: yes configure:8484: checking for unistd.h configure:8484: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8484: $? = 0 configure:8484: result: yes configure:8509: checking for dlfcn.h configure:8509: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:8509: $? = 0 configure:8509: result: yes configure:8737: checking for objdir configure:8753: result: .libs configure:9017: checking if mpicc supports -fno-rtti -fno-exceptions configure:9036: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command-line option '-fno-rtti' is valid for C++/D/ObjC++ but not for C configure:9040: $? = 0 configure:9053: result: no configure:9417: checking for mpicc option to produce PIC configure:9425: result: -fPIC -DPIC configure:9433: checking if mpicc PIC flag -fPIC -DPIC works configure:9452: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -fPIC -DPIC -DPIC conftest.c >&5 configure:9456: $? = 0 configure:9469: result: yes configure:9498: checking if mpicc static flag -static works configure:9527: result: no configure:9542: checking if mpicc supports -c -o file.o configure:9564: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -o out/conftest2.o conftest.c >&5 configure:9568: $? = 0 configure:9590: result: yes configure:9598: checking if mpicc supports -c -o file.o configure:9646: result: yes configure:9679: checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:10953: result: yes configure:11194: checking dynamic linker characteristics configure:11776: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -Wl,-rpath -Wl,/foo conftest.c >&5 configure:11776: $? = 0 configure:12027: result: GNU/Linux ld.so configure:12149: checking how to hardcode library paths into programs configure:12174: result: immediate configure:12726: checking whether stripping libraries is possible configure:12735: result: yes configure:12777: checking if libtool supports shared libraries configure:12779: result: yes configure:12782: checking whether to build shared libraries configure:12807: result: no configure:12810: checking whether to build static libraries configure:12814: result: yes configure:12971: checking for Fortran 77 compiler version configure:12980: gfortran --version >&5 GNU Fortran (Ubuntu 12.2.0-10ubuntu1) 12.2.0 Copyright (C) 2022 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:12991: $? = 0 configure:12980: gfortran -v >&5 Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/12/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu 12.2.0-10ubuntu1' --with-bugurl=file:///usr/share/doc/gcc-12/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-12 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-12-h1d971/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-h1d971/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-offload-defaulted --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 12.2.0 (Ubuntu 12.2.0-10ubuntu1) ... rest of stderr output deleted ... configure:12991: $? = 0 configure:12980: gfortran -V >&5 gfortran: error: unrecognized command-line option '-V' gfortran: fatal error: no input files compilation terminated. configure:12991: $? = 1 configure:12980: gfortran -qversion >&5 gfortran: error: unrecognized command-line option '-qversion'; did you mean '--version'? gfortran: fatal error: no input files compilation terminated. configure:12991: $? = 1 configure:13000: checking whether the compiler supports GNU Fortran 77 configure:13014: gfortran -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong conftest.F >&5 configure:13014: $? = 0 configure:13024: result: yes configure:13032: checking whether gfortran accepts -g configure:13044: gfortran -c -g conftest.f >&5 configure:13044: $? = 0 configure:13053: result: yes configure:13182: checking if libtool supports shared libraries configure:13184: result: yes configure:13187: checking whether to build shared libraries configure:13211: result: no configure:13214: checking whether to build static libraries configure:13218: result: yes configure:13576: checking for gfortran option to produce PIC configure:13584: result: -fPIC configure:13592: checking if gfortran PIC flag -fPIC works configure:13611: gfortran -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -fPIC conftest.f >&5 configure:13615: $? = 0 configure:13628: result: yes configure:13651: checking if gfortran static flag -static works configure:13680: result: yes configure:13692: checking if gfortran supports -c -o file.o configure:13714: gfortran -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -o out/conftest2.o conftest.f >&5 configure:13718: $? = 0 configure:13740: result: yes configure:13745: checking if gfortran supports -c -o file.o configure:13793: result: yes configure:13823: checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:15046: result: yes configure:15188: checking dynamic linker characteristics configure:15942: result: GNU/Linux ld.so configure:16007: checking how to hardcode library paths into programs configure:16032: result: immediate configure:16067: checking for perl configure:16090: found /usr/bin/perl configure:16103: result: /usr/bin/perl configure:16113: checking for vendor cc to be used instead of gcc configure:16115: result: configure:16121: checking for cc configure:16153: result: mpicc configure:16602: checking for C compiler version configure:16611: mpicc --version >&5 gcc (Ubuntu 12.2.0-10ubuntu1) 12.2.0 Copyright (C) 2022 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:16622: $? = 0 configure:16611: mpicc -v >&5 Using built-in specs. COLLECT_GCC=/usr/bin/gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/12/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu 12.2.0-10ubuntu1' --with-bugurl=file:///usr/share/doc/gcc-12/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-12 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-12-h1d971/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-h1d971/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-offload-defaulted --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 12.2.0 (Ubuntu 12.2.0-10ubuntu1) ... rest of stderr output deleted ... configure:16622: $? = 0 configure:16611: mpicc -V >&5 gcc: error: unrecognized command-line option '-V' gcc: fatal error: no input files compilation terminated. configure:16622: $? = 1 configure:16611: mpicc -qversion >&5 gcc: error: unrecognized command-line option '-qversion'; did you mean '--version'? gcc: fatal error: no input files compilation terminated. configure:16622: $? = 1 configure:16611: mpicc -version >&5 gcc: error: unrecognized command-line option '-version' gcc: fatal error: no input files compilation terminated. configure:16622: $? = 1 configure:16626: checking whether the compiler supports GNU C configure:16656: result: yes configure:16667: checking whether mpicc accepts -g configure:16732: result: yes configure:16752: checking for mpicc option to enable C11 features configure:16785: result: none needed configure:16901: checking whether mpicc understands -c and -o together configure:16939: result: yes configure:16958: checking dependency style of mpicc configure:17070: result: gcc3 configure:17279: checking for sqrt in -lm configure:17302: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lm >&5 conftest.c:31:6: warning: conflicting types for built-in function 'sqrt'; expected 'double(double)' [-Wbuiltin-declaration-mismatch] 31 | char sqrt (); | ^~~~ conftest.c:1:1: note: 'sqrt' is declared in header '' 1 | /* confdefs.h */ configure:17302: $? = 0 configure:17312: result: yes configure:17330: checking how to get verbose linking output from gfortran configure:17341: gfortran -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong conftest.f >&5 configure:17341: $? = 0 configure:17360: gfortran -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -v -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.f -lm Using built-in specs. Target: x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 12.2.0 (Ubuntu 12.2.0-10ubuntu1) /usr/lib/gcc/x86_64-linux-gnu/12/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -dumpbase-ext .f -mtune=generic -march=x86-64 -g -O2 -version -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -flto=auto -fstack-protector-strong -flto=auto -ffat-lto-objects -flto=auto -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/12/finclude -fpre-include=/usr/include/finclude/math-vector-fortran.h -o /tmp/ccu6zJDl.s GNU Fortran (Ubuntu 12.2.0-10ubuntu1) version 12.2.0 (x86_64-linux-gnu) compiled by GNU C version 12.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.25-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (Ubuntu 12.2.0-10ubuntu1) version 12.2.0 (x86_64-linux-gnu) compiled by GNU C version 12.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.25-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --gdwarf-5 --64 -o /tmp/cca58tVi.o /tmp/ccu6zJDl.s GNU assembler version 2.39.50 (x86_64-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.39.50.20221211 Reading specs from /usr/lib/gcc/x86_64-linux-gnu/12/libgfortran.spec rename spec lib to liborig /usr/lib/gcc/x86_64-linux-gnu/12/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/12/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/12/lto-wrapper -plugin-opt=-fresolution=/tmp/cczvzpDw.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -flto=auto -flto=auto -flto=auto -flto=auto --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -z now -z relro -o conftest /usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/12/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -Bsymbolic-functions -z relro -z now -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi /tmp/cca58tVi.o -lgfortran -lm -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/12/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu/crtn.o /usr/lib/gcc/x86_64-linux-gnu/12/lto-wrapper -fresolution=/tmp/cczvzpDw.res -flinker-output=pie /tmp/cca58tVi.o /usr/lib/gcc/x86_64-linux-gnu/12/lto-wrapper -fresolution=/tmp/cczvzpDw.res -flinker-output=pie /tmp/cca58tVi.o LTO parallelism level set to 4 gfortran @/tmp/ccXd8AeE Using built-in specs. Target: x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 12.2.0 (Ubuntu 12.2.0-10ubuntu1) /usr/lib/gcc/x86_64-linux-gnu/12/lto1 -quiet -dumpbase ./conftest.wpa -mtune=generic -march=x86-64 -g -g -O2 -O2 -version -fno-openmp -fno-openacc -fPIC -fcf-protection=none -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -fstack-protector-strong -ffat-lto-objects -fltrans-output-list=/tmp/ccxmQ0Oo.ltrans.out -fwpa=4 -fresolution=/tmp/cczvzpDw.res -flinker-output=pie @/tmp/cclcDnpy GNU GIMPLE (Ubuntu 12.2.0-10ubuntu1) version 12.2.0 (x86_64-linux-gnu) compiled by GNU C version 12.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.25-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU GIMPLE (Ubuntu 12.2.0-10ubuntu1) version 12.2.0 (x86_64-linux-gnu) compiled by GNU C version 12.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.25-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 make -f /tmp/ccDTzzFV.mk -j4 all Using built-in specs. Target: x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 12.2.0 (Ubuntu 12.2.0-10ubuntu1) /usr/lib/gcc/x86_64-linux-gnu/12/lto1 -quiet -dumpbase ./conftest.ltrans0.ltrans -mtune=generic -march=x86-64 -g -g -O2 -O2 -version -fno-openmp -fno-openacc -fPIC -fcf-protection=none -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -fstack-protector-strong -ffat-lto-objects -fltrans /tmp/ccxmQ0Oo.ltrans0.o -o /tmp/cckw7bci.s GNU GIMPLE (Ubuntu 12.2.0-10ubuntu1) version 12.2.0 (x86_64-linux-gnu) compiled by GNU C version 12.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.25-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU GIMPLE (Ubuntu 12.2.0-10ubuntu1) version 12.2.0 (x86_64-linux-gnu) compiled by GNU C version 12.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.25-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --gdwarf-5 --64 -o /tmp/ccxmQ0Oo.ltrans0.ltrans.o /tmp/cckw7bci.s GNU assembler version 2.39.50 (x86_64-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.39.50.20221211 configure:17443: result: -v configure:17445: checking for Fortran 77 libraries of gfortran configure:17469: gfortran -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -v -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.f -lm Using built-in specs. Target: x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 12.2.0 (Ubuntu 12.2.0-10ubuntu1) /usr/lib/gcc/x86_64-linux-gnu/12/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -dumpbase-ext .f -mtune=generic -march=x86-64 -g -O2 -version -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -flto=auto -fstack-protector-strong -flto=auto -ffat-lto-objects -flto=auto -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/12/finclude -fpre-include=/usr/include/finclude/math-vector-fortran.h -o /tmp/ccX3l10X.s GNU Fortran (Ubuntu 12.2.0-10ubuntu1) version 12.2.0 (x86_64-linux-gnu) compiled by GNU C version 12.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.25-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran2008 (Ubuntu 12.2.0-10ubuntu1) version 12.2.0 (x86_64-linux-gnu) compiled by GNU C version 12.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.25-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --gdwarf-5 --64 -o /tmp/ccJhhP0J.o /tmp/ccX3l10X.s GNU assembler version 2.39.50 (x86_64-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.39.50.20221211 Reading specs from /usr/lib/gcc/x86_64-linux-gnu/12/libgfortran.spec rename spec lib to liborig /usr/lib/gcc/x86_64-linux-gnu/12/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/12/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/12/lto-wrapper -plugin-opt=-fresolution=/tmp/ccJ5tcc7.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -flto=auto -flto=auto -flto=auto -flto=auto --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -z now -z relro -o conftest /usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/12/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -Bsymbolic-functions -z relro -z now -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi /tmp/ccJhhP0J.o -lgfortran -lm -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/12/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu/crtn.o /usr/lib/gcc/x86_64-linux-gnu/12/lto-wrapper -fresolution=/tmp/ccJ5tcc7.res -flinker-output=pie /tmp/ccJhhP0J.o /usr/lib/gcc/x86_64-linux-gnu/12/lto-wrapper -fresolution=/tmp/ccJ5tcc7.res -flinker-output=pie /tmp/ccJhhP0J.o LTO parallelism level set to 4 gfortran @/tmp/ccQMt5y4 Using built-in specs. Target: x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 12.2.0 (Ubuntu 12.2.0-10ubuntu1) /usr/lib/gcc/x86_64-linux-gnu/12/lto1 -quiet -dumpbase ./conftest.wpa -mtune=generic -march=x86-64 -g -g -O2 -O2 -version -fno-openmp -fno-openacc -fPIC -fcf-protection=none -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -fstack-protector-strong -ffat-lto-objects -fltrans-output-list=/tmp/ccHQyhjg.ltrans.out -fwpa=4 -fresolution=/tmp/ccJ5tcc7.res -flinker-output=pie @/tmp/ccEK9h2s GNU GIMPLE (Ubuntu 12.2.0-10ubuntu1) version 12.2.0 (x86_64-linux-gnu) compiled by GNU C version 12.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.25-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU GIMPLE (Ubuntu 12.2.0-10ubuntu1) version 12.2.0 (x86_64-linux-gnu) compiled by GNU C version 12.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.25-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 make -f /tmp/cciNdXsf.mk -j4 all Using built-in specs. Target: x86_64-linux-gnu Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 12.2.0 (Ubuntu 12.2.0-10ubuntu1) /usr/lib/gcc/x86_64-linux-gnu/12/lto1 -quiet -dumpbase ./conftest.ltrans0.ltrans -mtune=generic -march=x86-64 -g -g -O2 -O2 -version -fno-openmp -fno-openacc -fPIC -fcf-protection=none -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -fstack-protector-strong -ffat-lto-objects -fltrans /tmp/ccHQyhjg.ltrans0.o -o /tmp/ccKAjyUW.s GNU GIMPLE (Ubuntu 12.2.0-10ubuntu1) version 12.2.0 (x86_64-linux-gnu) compiled by GNU C version 12.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.25-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU GIMPLE (Ubuntu 12.2.0-10ubuntu1) version 12.2.0 (x86_64-linux-gnu) compiled by GNU C version 12.2.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.25-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -v --gdwarf-5 --64 -o /tmp/ccHQyhjg.ltrans0.ltrans.o /tmp/ccKAjyUW.s GNU assembler version 2.39.50 (x86_64-linux-gnu) using BFD version (GNU Binutils for Ubuntu) 2.39.50.20221211 configure:17685: result: -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath configure:17701: checking for dummy main to link with Fortran 77 libraries configure:17736: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:17736: $? = 0 configure:17783: result: none configure:17815: checking for Fortran 77 name-mangling scheme configure:17829: gfortran -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong conftest.f >&5 configure:17829: $? = 0 configure:17868: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c cfortran_test.o -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: /tmp/cc4yuLSF.ltrans0.ltrans.o: in function `main': /usr/src/mpb-1.11.1-5/:44: undefined reference to `foobar' collect2: error: ld returned 1 exit status configure:17868: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char foobar (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return foobar (); | ; | return 0; | } configure:17868: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c cfortran_test.o -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:17868: $? = 0 configure:17924: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c cfortran_test.o -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:17924: $? = 0 configure:17967: result: lower case, underscore, no extra underscore configure:18385: checking for fftw_execute in -lfftw3 configure:18416: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lfftw3 -lm >&5 configure:18416: $? = 0 configure:18427: result: yes configure:19027: checking if sgemm_ is being linked in already configure:19052: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: /tmp/ccjjoDYF.ltrans0.ltrans.o: in function `main': /usr/src/mpb-1.11.1-5/:47: undefined reference to `sgemm_' collect2: error: ld returned 1 exit status configure:19052: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19058: result: no configure:19066: checking for sgemm_ in -lopenblas configure:19097: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lopenblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lopenblas: No such file or directory collect2: error: ld returned 1 exit status configure:19097: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19108: result: no configure:19120: checking for ATL_xerbla in -latlas configure:19151: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -latlas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -latlas: No such file or directory collect2: error: ld returned 1 exit status configure:19151: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char ATL_xerbla (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return ATL_xerbla (); | ; | return 0; | } configure:19161: result: no configure:19270: checking for sgemm_ in -lblas configure:19301: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:19301: $? = 0 configure:19312: result: yes configure:19317: checking for dgemm_ in -ldgemm configure:19348: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -ldgemm -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -ldgemm: No such file or directory collect2: error: ld returned 1 exit status configure:19348: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char dgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return dgemm_ (); | ; | return 0; | } configure:19359: result: no configure:19422: checking for sgemm_ in -lmkl configure:19453: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lmkl -lguide -lpthread -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lmkl: No such file or directory /usr/bin/ld: cannot find -lguide: No such file or directory collect2: error: ld returned 1 exit status configure:19453: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19464: result: no configure:19476: checking for sgemm_ in -framework vecLib configure:19501: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -framework vecLib -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 gcc: error: unrecognized command-line option '-framework' configure:19501: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19507: result: no configure:19515: checking for sgemm_ in -lcxml configure:19546: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lcxml -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lcxml: No such file or directory collect2: error: ld returned 1 exit status configure:19546: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19557: result: no configure:19569: checking for sgemm_ in -ldxml configure:19600: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -ldxml -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -ldxml: No such file or directory collect2: error: ld returned 1 exit status configure:19600: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19611: result: no configure:19727: checking for sgemm_ in -lscs configure:19758: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lscs -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lscs: No such file or directory collect2: error: ld returned 1 exit status configure:19758: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19769: result: no configure:19781: checking for sgemm_ in -lcomplib.sgimath configure:19812: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lcomplib.sgimath -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lcomplib.sgimath: No such file or directory collect2: error: ld returned 1 exit status configure:19812: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19823: result: no configure:19835: checking for sgemm_ in -lblas configure:19877: result: yes configure:19882: checking for sgemm_ in -lessl configure:19913: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lessl -lblas -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lessl: No such file or directory collect2: error: ld returned 1 exit status configure:19913: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char sgemm_ (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return sgemm_ (); | ; | return 0; | } configure:19924: result: no configure:19938: checking for sgemm_ in -lblas configure:19980: result: yes configure:20097: checking for cheev_ configure:20097: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lfftw3 -lm -lblas -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: /tmp/ccRXI0Lu.ltrans0.ltrans.o: in function `main': /usr/src/mpb-1.11.1-5/:59: undefined reference to `cheev_' collect2: error: ld returned 1 exit status configure:20097: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | /* end confdefs.h. */ | /* Define cheev_ to an innocuous variant, in case declares cheev_. | For example, HP-UX 11i declares gettimeofday. */ | #define cheev_ innocuous_cheev_ | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char cheev_ (); below. */ | | #include | #undef cheev_ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char cheev_ (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_cheev_ || defined __stub___cheev_ | choke me | #endif | | int | main (void) | { | return cheev_ (); | ; | return 0; | } configure:20097: result: no configure:20111: checking for cheev_ in -llapack configure:20142: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -llapack -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath -lblas -lfftw3 -lm >&5 configure:20142: $? = 0 configure:20153: result: yes configure:21079: checking for deflate in -lz configure:21110: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:21110: $? = 0 configure:21120: result: yes configure:21135: checking for H5Pcreate in -lhdf5 configure:21166: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:21166: $? = 0 configure:21176: result: yes configure:21183: checking for hdf5.h configure:21183: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:21183: $? = 0 configure:21183: result: yes configure:21253: checking for guile configure:21274: found /usr/bin/guile configure:21286: result: yes configure:21300: checking for guile-config configure:21321: found /usr/bin/guile-config configure:21333: result: guile-config configure:21658: checking if linking to guile works configure:21683: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: /tmp/cc8HKLpS.ltrans0.ltrans.o: in function `main': /usr/src/mpb-1.11.1-5/:52: undefined reference to `gh_enter' collect2: error: ld returned 1 exit status configure:21683: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | #define HAVE_LAPACK 1 | #define HAVE_LIBZ 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char gh_enter (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return gh_enter (); | ; | return 0; | } configure:21711: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:21711: $? = 0 configure:21713: result: yes configure:21726: checking for libguile.h configure:21726: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c >&5 In file included from /usr/include/guile/3.0/libguile.h:29, from conftest.c:64: /usr/include/guile/3.0/libguile/gc.h: In function 'scm_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:161:14: note: in expansion of macro 'SCM_PACK_POINTER' 161 | SCM cell = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_double_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:179:7: note: in expansion of macro 'SCM_PACK_POINTER' 179 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (2 * sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_words': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:218:7: note: in expansion of macro 'SCM_PACK_POINTER' 218 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_bits) * n_words)); | ^~~~~~~~~~~~~~~~ configure:21726: $? = 0 configure:21726: result: yes configure:21732: checking for guile/gh.h configure:21732: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c >&5 conftest.c:65:10: fatal error: guile/gh.h: No such file or directory 65 | #include | ^~~~~~~~~~~~ compilation terminated. configure:21732: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | #define HAVE_LAPACK 1 | #define HAVE_LIBZ 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_LIBGUILE_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:21732: result: no configure:21742: checking for scm_make_smob_type configure:21742: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:21742: $? = 0 configure:21742: result: yes configure:21748: checking for scm_array_get_handle configure:21748: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:21748: $? = 0 configure:21748: result: yes configure:21754: checking for scm_is_array configure:21754: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:21754: $? = 0 configure:21754: result: yes configure:21761: checking for SCM_SMOB_PREDICATE configure:21787: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 In file included from /usr/include/guile/3.0/libguile.h:29, from conftest.c:41: /usr/include/guile/3.0/libguile/gc.h: In function 'scm_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:161:14: note: in expansion of macro 'SCM_PACK_POINTER' 161 | SCM cell = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_double_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:179:7: note: in expansion of macro 'SCM_PACK_POINTER' 179 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (2 * sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_words': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:218:7: note: in expansion of macro 'SCM_PACK_POINTER' 218 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_bits) * n_words)); | ^~~~~~~~~~~~~~~~ conftest.c: In function 'main': /usr/include/guile/3.0/libguile/scm.h:171:62: warning: assignment to 'SCM' {aka 'struct scm_unused_struct *'} from 'int' makes pointer from integer without a cast [-Wint-conversion] 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/scm.h:426:38: note: in expansion of macro 'SCM_UNPACK' 426 | #define SCM_IMP(x) (6 & SCM_UNPACK (x)) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:427:35: note: in expansion of macro 'SCM_IMP' 427 | #define SCM_NIMP(x) (!SCM_IMP (x)) | ^~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:4: note: in expansion of macro 'SCM_NIMP' 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:67: warning: pointer/integer type mismatch in conditional expression 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/scm.h:426:38: note: in expansion of macro 'SCM_UNPACK' 426 | #define SCM_IMP(x) (6 & SCM_UNPACK (x)) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:427:35: note: in expansion of macro 'SCM_IMP' 427 | #define SCM_NIMP(x) (!SCM_IMP (x)) | ^~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:4: note: in expansion of macro 'SCM_NIMP' 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:62: warning: assignment to 'SCM' {aka 'struct scm_unused_struct *'} from 'int' makes pointer from integer without a cast [-Wint-conversion] 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:56:28: note: in expansion of macro 'SCM_CELL_WORD' 56 | #define SCM_CELL_WORD_0(x) SCM_CELL_WORD ((x), 0) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:83:26: note: in expansion of macro 'SCM_CELL_WORD_0' 83 | #define SCM_CELL_TYPE(x) SCM_CELL_WORD_0 (x) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:512:43: note: in expansion of macro 'SCM_CELL_TYPE' 512 | #define SCM_TYP16(x) (0xffff & SCM_CELL_TYPE (x)) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:20: note: in expansion of macro 'SCM_TYP16' 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^~~~ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:67: warning: pointer/integer type mismatch in conditional expression 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:56:28: note: in expansion of macro 'SCM_CELL_WORD' 56 | #define SCM_CELL_WORD_0(x) SCM_CELL_WORD ((x), 0) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:83:26: note: in expansion of macro 'SCM_CELL_WORD_0' 83 | #define SCM_CELL_TYPE(x) SCM_CELL_WORD_0 (x) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:512:43: note: in expansion of macro 'SCM_CELL_TYPE' 512 | #define SCM_TYP16(x) (0xffff & SCM_CELL_TYPE (x)) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:20: note: in expansion of macro 'SCM_TYP16' 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^~~~ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:62: warning: assignment to 'SCM' {aka 'struct scm_unused_struct *'} from 'int' makes pointer from integer without a cast [-Wint-conversion] 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:56:28: note: in expansion of macro 'SCM_CELL_WORD' 56 | #define SCM_CELL_WORD_0(x) SCM_CELL_WORD ((x), 0) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:83:26: note: in expansion of macro 'SCM_CELL_WORD_0' 83 | #define SCM_CELL_TYPE(x) SCM_CELL_WORD_0 (x) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:512:43: note: in expansion of macro 'SCM_CELL_TYPE' 512 | #define SCM_TYP16(x) (0xffff & SCM_CELL_TYPE (x)) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:20: note: in expansion of macro 'SCM_TYP16' 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^~~~ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:67: warning: pointer/integer type mismatch in conditional expression 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:56:28: note: in expansion of macro 'SCM_CELL_WORD' 56 | #define SCM_CELL_WORD_0(x) SCM_CELL_WORD ((x), 0) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:83:26: note: in expansion of macro 'SCM_CELL_WORD_0' 83 | #define SCM_CELL_TYPE(x) SCM_CELL_WORD_0 (x) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:512:43: note: in expansion of macro 'SCM_CELL_TYPE' 512 | #define SCM_TYP16(x) (0xffff & SCM_CELL_TYPE (x)) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:20: note: in expansion of macro 'SCM_TYP16' 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^~~~ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:467:17: warning: statement with no effect [-Wunused-value] 467 | (SCM_NIMP (x) && type (x) == (tag)) | ^ /usr/include/guile/3.0/libguile/scm.h:513:34: note: in expansion of macro 'SCM_HAS_HEAP_TYPE' 513 | #define SCM_HAS_TYP16(x, tag) (SCM_HAS_HEAP_TYPE (x, SCM_TYP16, tag)) | ^~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:54:41: note: in expansion of macro 'SCM_HAS_TYP16' 54 | #define SCM_SMOB_PREDICATE(tag, obj) SCM_HAS_TYP16 (obj, tag) | ^~~~~~~~~~~~~ conftest.c:57:8: note: in expansion of macro 'SCM_SMOB_PREDICATE' 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:427:34: warning: 'x' is used uninitialized [-Wuninitialized] 427 | #define SCM_NIMP(x) (!SCM_IMP (x)) | ^ conftest.c:57:5: note: 'x' was declared here 57 | int x; SCM_SMOB_PREDICATE(1,x); | ^ configure:21787: $? = 0 configure:21795: result: yes configure:21802: checking for SCM_SMOB_DATA configure:21828: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 In file included from /usr/include/guile/3.0/libguile.h:29, from conftest.c:42: /usr/include/guile/3.0/libguile/gc.h: In function 'scm_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:161:14: note: in expansion of macro 'SCM_PACK_POINTER' 161 | SCM cell = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_double_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:179:7: note: in expansion of macro 'SCM_PACK_POINTER' 179 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (2 * sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_words': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:218:7: note: in expansion of macro 'SCM_PACK_POINTER' 218 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_bits) * n_words)); | ^~~~~~~~~~~~~~~~ conftest.c: In function 'main': /usr/include/guile/3.0/libguile/scm.h:171:62: warning: assignment to 'SCM' {aka 'struct scm_unused_struct *'} from 'int' makes pointer from integer without a cast [-Wint-conversion] 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:179:42: note: in expansion of macro 'SCM_CELL_WORD' 179 | #define SCM_SMOB_DATA_N(x, n) (SCM_CELL_WORD ((x), (n))) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:183:42: note: in expansion of macro 'SCM_SMOB_DATA_N' 183 | #define SCM_SMOB_DATA_1(x) (SCM_SMOB_DATA_N ((x), 1)) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:192:42: note: in expansion of macro 'SCM_SMOB_DATA_1' 192 | #define SCM_SMOB_DATA(x) (SCM_SMOB_DATA_1 (x)) | ^~~~~~~~~~~~~~~ conftest.c:58:8: note: in expansion of macro 'SCM_SMOB_DATA' 58 | int x; SCM_SMOB_DATA(x); | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:67: warning: pointer/integer type mismatch in conditional expression 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:179:42: note: in expansion of macro 'SCM_CELL_WORD' 179 | #define SCM_SMOB_DATA_N(x, n) (SCM_CELL_WORD ((x), (n))) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:183:42: note: in expansion of macro 'SCM_SMOB_DATA_N' 183 | #define SCM_SMOB_DATA_1(x) (SCM_SMOB_DATA_N ((x), 1)) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:192:42: note: in expansion of macro 'SCM_SMOB_DATA_1' 192 | #define SCM_SMOB_DATA(x) (SCM_SMOB_DATA_1 (x)) | ^~~~~~~~~~~~~~~ conftest.c:58:8: note: in expansion of macro 'SCM_SMOB_DATA' 58 | int x; SCM_SMOB_DATA(x); | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:62: warning: assignment to 'SCM' {aka 'struct scm_unused_struct *'} from 'int' makes pointer from integer without a cast [-Wint-conversion] 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:179:42: note: in expansion of macro 'SCM_CELL_WORD' 179 | #define SCM_SMOB_DATA_N(x, n) (SCM_CELL_WORD ((x), (n))) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:183:42: note: in expansion of macro 'SCM_SMOB_DATA_N' 183 | #define SCM_SMOB_DATA_1(x) (SCM_SMOB_DATA_N ((x), 1)) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:192:42: note: in expansion of macro 'SCM_SMOB_DATA_1' 192 | #define SCM_SMOB_DATA(x) (SCM_SMOB_DATA_1 (x)) | ^~~~~~~~~~~~~~~ conftest.c:58:8: note: in expansion of macro 'SCM_SMOB_DATA' 58 | int x; SCM_SMOB_DATA(x); | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:67: warning: pointer/integer type mismatch in conditional expression 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) | ^ /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:188:48: note: in expansion of macro 'SCM_UNPACK' 188 | #define SCM_UNPACK_POINTER(x) ((scm_t_bits *) (SCM_UNPACK (x))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:44:37: note: in expansion of macro 'SCM_UNPACK_POINTER' 44 | #define SCM2PTR(x) ((scm_t_cell *) (SCM_UNPACK_POINTER (x))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:46:43: note: in expansion of macro 'SCM2PTR' 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^~~~~~~ /usr/include/guile/3.0/libguile/gc.h:47:47: note: in expansion of macro 'SCM_GC_CELL_OBJECT' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:179:42: note: in expansion of macro 'SCM_CELL_WORD' 179 | #define SCM_SMOB_DATA_N(x, n) (SCM_CELL_WORD ((x), (n))) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:183:42: note: in expansion of macro 'SCM_SMOB_DATA_N' 183 | #define SCM_SMOB_DATA_1(x) (SCM_SMOB_DATA_N ((x), 1)) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:192:42: note: in expansion of macro 'SCM_SMOB_DATA_1' 192 | #define SCM_SMOB_DATA(x) (SCM_SMOB_DATA_1 (x)) | ^~~~~~~~~~~~~~~ conftest.c:58:8: note: in expansion of macro 'SCM_SMOB_DATA' 58 | int x; SCM_SMOB_DATA(x); | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/scm.h:171:26: warning: statement with no effect [-Wunused-value] 171 | # define SCM_UNPACK(x) ((scm_t_bits) (0? (*(volatile SCM *)0=(x)): x)) /usr/include/guile/3.0/libguile/gc.h:47:35: note: in expansion of macro 'SCM_UNPACK' 47 | #define SCM_GC_CELL_WORD(x, n) (SCM_UNPACK (SCM_GC_CELL_OBJECT ((x), (n)))) | ^~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h:55:29: note: in expansion of macro 'SCM_GC_CELL_WORD' 55 | #define SCM_CELL_WORD(x, n) SCM_GC_CELL_WORD ((x), (n)) | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:179:42: note: in expansion of macro 'SCM_CELL_WORD' 179 | #define SCM_SMOB_DATA_N(x, n) (SCM_CELL_WORD ((x), (n))) | ^~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:183:42: note: in expansion of macro 'SCM_SMOB_DATA_N' 183 | #define SCM_SMOB_DATA_1(x) (SCM_SMOB_DATA_N ((x), 1)) | ^~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/smob.h:192:42: note: in expansion of macro 'SCM_SMOB_DATA_1' 192 | #define SCM_SMOB_DATA(x) (SCM_SMOB_DATA_1 (x)) | ^~~~~~~~~~~~~~~ conftest.c:58:8: note: in expansion of macro 'SCM_SMOB_DATA' 58 | int x; SCM_SMOB_DATA(x); | ^~~~~~~~~~~~~ In file included from /usr/include/guile/3.0/libguile/pairs.h:26, from /usr/include/guile/3.0/libguile/alist.h:26, from /usr/include/guile/3.0/libguile.h:31: /usr/include/guile/3.0/libguile/gc.h:46:56: warning: 'x' is used uninitialized [-Wuninitialized] 46 | #define SCM_GC_CELL_OBJECT(x, n) (((SCM *)SCM2PTR (x)) [n]) | ^ conftest.c:58:5: note: 'x' was declared here 58 | int x; SCM_SMOB_DATA(x); | ^ configure:21828: $? = 0 configure:21836: result: yes configure:21843: checking for SCM_NEWSMOB configure:21869: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 In file included from /usr/include/guile/3.0/libguile.h:29, from conftest.c:43: /usr/include/guile/3.0/libguile/gc.h: In function 'scm_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:161:14: note: in expansion of macro 'SCM_PACK_POINTER' 161 | SCM cell = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_double_cell': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:179:7: note: in expansion of macro 'SCM_PACK_POINTER' 179 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (2 * sizeof (scm_t_cell))); | ^~~~~~~~~~~~~~~~ /usr/include/guile/3.0/libguile/gc.h: In function 'scm_words': /usr/include/guile/3.0/libguile/scm.h:189:40: warning: cast from function call of type 'void *' to non-matching type 'long unsigned int' [-Wbad-function-cast] 189 | #define SCM_PACK_POINTER(x) (SCM_PACK ((scm_t_bits) (x))) | ^ /usr/include/guile/3.0/libguile/scm.h:176:30: note: in definition of macro 'SCM_PACK' 176 | # define SCM_PACK(x) ((SCM) (x)) | ^ /usr/include/guile/3.0/libguile/gc.h:218:7: note: in expansion of macro 'SCM_PACK_POINTER' 218 | z = SCM_PACK_POINTER (SCM_GC_MALLOC (sizeof (scm_t_bits) * n_words)); | ^~~~~~~~~~~~~~~~ In file included from /usr/include/guile/3.0/libguile/threads.h:29, from /usr/include/guile/3.0/libguile/async.h:25, from /usr/include/guile/3.0/libguile.h:35: conftest.c: In function 'main': /usr/include/guile/3.0/libguile/smob.h:159:5: warning: assignment to 'int' from 'SCM' {aka 'struct scm_unused_struct *'} makes integer from pointer without a cast [-Wint-conversion] 159 | z = scm_new_smob ((tc), (scm_t_bits)(data)) | ^ conftest.c:59:8: note: in expansion of macro 'SCM_NEWSMOB' 59 | int x; SCM_NEWSMOB(x,1,0); | ^~~~~~~~~~~ conftest.c:59:5: warning: variable 'x' set but not used [-Wunused-but-set-variable] 59 | int x; SCM_NEWSMOB(x,1,0); | ^ configure:21869: $? = 0 configure:21877: result: yes configure:21889: checking how to activate readline in Guile configure:21899: result: ice-9 readline configure:21928: checking for libctl dir configure:21948: result: /usr/share/libctl configure:21956: checking for gen-ctl-io configure:21977: found /usr/bin/gen-ctl-io configure:21988: result: gen-ctl-io configure:22005: checking for ctl_get_vector3 in -lctl configure:22036: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lctl -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:22036: $? = 0 configure:22046: result: yes configure:22061: checking for ctl.h configure:22061: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c >&5 configure:22061: $? = 0 configure:22061: result: yes configure:22109: checking whether libctl version is at least 4.0.0 configure:22116: checking how to run the C preprocessor configure:22142: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c configure:22142: $? = 0 configure:22157: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c conftest.c:44:10: fatal error: ac_nonexistent.h: No such file or directory 44 | #include | ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:22157: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | #define HAVE_LAPACK 1 | #define HAVE_LIBZ 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_LIBGUILE_H 1 | #define HAVE_SCM_MAKE_SMOB_TYPE 1 | #define HAVE_SCM_ARRAY_GET_HANDLE 1 | #define HAVE_SCM_IS_ARRAY 1 | #define HAVE_SCM_SMOB_PREDICATE 1 | #define HAVE_SCM_SMOB_DATA 1 | #define HAVE_SCM_NEWSMOB 1 | #define HAVE_LIBCTL 1 | /* end confdefs.h. */ | #include configure:22184: result: mpicc -E configure:22198: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c configure:22198: $? = 0 configure:22213: mpicc -E -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -I/usr/include/guile/3.0 conftest.c conftest.c:44:10: fatal error: ac_nonexistent.h: No such file or directory 44 | #include | ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:22213: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | #define HAVE_LAPACK 1 | #define HAVE_LIBZ 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_LIBGUILE_H 1 | #define HAVE_SCM_MAKE_SMOB_TYPE 1 | #define HAVE_SCM_ARRAY_GET_HANDLE 1 | #define HAVE_SCM_IS_ARRAY 1 | #define HAVE_SCM_SMOB_PREDICATE 1 | #define HAVE_SCM_SMOB_DATA 1 | #define HAVE_SCM_NEWSMOB 1 | #define HAVE_LIBCTL 1 | /* end confdefs.h. */ | #include configure:22256: result: ok configure:22265: checking for libctl_quiet feature configure:22268: result: yes configure:22287: checking for vector3_dot in -lctlgeom configure:22318: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:22318: $? = 0 configure:22328: result: yes configure:22341: checking for ctlgeom.h configure:22341: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:22341: $? = 0 configure:22341: result: yes configure:22404: checking for nlopt.h configure:22404: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 conftest.c:73:10: fatal error: nlopt.h: No such file or directory 73 | #include | ^~~~~~~~~ compilation terminated. configure:22404: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | #define HAVE_LAPACK 1 | #define HAVE_LIBZ 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_LIBGUILE_H 1 | #define HAVE_SCM_MAKE_SMOB_TYPE 1 | #define HAVE_SCM_ARRAY_GET_HANDLE 1 | #define HAVE_SCM_IS_ARRAY 1 | #define HAVE_SCM_SMOB_PREDICATE 1 | #define HAVE_SCM_SMOB_DATA 1 | #define HAVE_SCM_NEWSMOB 1 | #define HAVE_LIBCTL 1 | #define HAVE_LIBCTL_QUIET 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:22404: result: no configure:22412: checking for nlopt_minimize in -lnlopt configure:22443: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lnlopt -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 /usr/bin/ld: cannot find -lnlopt: No such file or directory collect2: error: ld returned 1 exit status configure:22443: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "mpb" | #define PACKAGE_TARNAME "mpb" | #define PACKAGE_VERSION "1.11.1" | #define PACKAGE_STRING "mpb 1.11.1" | #define PACKAGE_BUGREPORT "" | #define PACKAGE_URL "" | #define MPB_VERSION_MAJOR 1 | #define MPB_VERSION_MINOR 11 | #define MPB_VERSION_PATCH 1 | #define PACKAGE "mpb" | #define VERSION "1.11.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define SCALAR_COMPLEX 1 | #define HAVE_LIBM 1 | #define F77_FUNC(name,NAME) name ## _ | #define F77_FUNC_(name,NAME) name ## _ | #define HAVE_LIBFFTW3 1 | #define HAVE_BLAS 1 | #define HAVE_LAPACK 1 | #define HAVE_LIBZ 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_LIBGUILE_H 1 | #define HAVE_SCM_MAKE_SMOB_TYPE 1 | #define HAVE_SCM_ARRAY_GET_HANDLE 1 | #define HAVE_SCM_IS_ARRAY 1 | #define HAVE_SCM_SMOB_PREDICATE 1 | #define HAVE_SCM_SMOB_DATA 1 | #define HAVE_SCM_NEWSMOB 1 | #define HAVE_LIBCTL 1 | #define HAVE_LIBCTL_QUIET 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | char nlopt_minimize (); | #ifdef F77_DUMMY_MAIN | | # ifdef __cplusplus | extern "C" | # endif | int F77_DUMMY_MAIN() { return 1; } | | #endif | int | main (void) | { | return nlopt_minimize (); | ; | return 0; | } configure:22453: result: no configure:22470: checking for egrep configure:22538: result: /usr/bin/grep -E configure:22544: checking for unistd.h configure:22544: result: yes configure:22550: checking for getopt.h configure:22550: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:22550: $? = 0 configure:22550: result: yes configure:22556: checking for nlopt.h configure:22556: result: no configure:22565: checking for an ANSI C-conforming const configure:22640: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 conftest.c: In function 'main': conftest.c:78:9: warning: cast discards 'const' qualifier from pointer target type [-Wcast-qual] 78 | ppc = (char**) pcpcc; | ^ configure:22640: $? = 0 configure:22648: result: yes configure:22656: checking for inline configure:22673: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 configure:22673: $? = 0 configure:22682: result: inline configure:22702: checking for getopt configure:22702: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:22702: $? = 0 configure:22702: result: yes configure:22708: checking for strncmp configure:22708: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 conftest.c:64:6: warning: conflicting types for built-in function 'strncmp'; expected 'int(const char *, const char *, long unsigned int)' [-Wbuiltin-declaration-mismatch] 64 | char strncmp (); | ^~~~~~~ conftest.c:56:1: note: 'strncmp' is declared in header '' 55 | #include 56 | #undef strncmp configure:22708: $? = 0 configure:22708: result: yes configure:22740: checking for bash configure:22776: result: /bin/bash configure:22801: checking for feenableexcept configure:22801: mpicc -o conftest -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi conftest.c -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath >&5 configure:22801: $? = 0 configure:22801: result: yes configure:22807: checking whether feenableexcept declaration is usable configure:22831: mpicc -c -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi conftest.c >&5 conftest.c: In function 'main': conftest.c:65:1: warning: implicit declaration of function 'feenableexcept'; did you mean 'feraiseexcept'? [-Wimplicit-function-declaration] 65 | feenableexcept(0); | ^~~~~~~~~~~~~~ | feraiseexcept configure:22831: $? = 0 configure:22840: result: yes configure:22910: updating cache ../config.cache configure:22958: checking that generated files are newer than configure configure:22964: result: done configure:23003: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by mpb config.status 1.11.1, which was generated by GNU Autoconf 2.71. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on lcy02-amd64-013 config.status:1218: creating Makefile config.status:1218: creating examples/Makefile config.status:1218: creating tests/Makefile config.status:1218: creating src/Makefile config.status:1218: creating src/util/Makefile config.status:1218: creating src/matrices/Makefile config.status:1218: creating src/matrixio/Makefile config.status:1218: creating src/maxwell/Makefile config.status:1218: creating mpb/Makefile config.status:1218: creating mpb/mpb.scm config.status:1218: creating mpb/mpb-split-preinstall config.status:1218: creating utils/Makefile config.status:1218: creating config.h config.status:1218: creating src/mpbconf.h config.status:1447: executing depfiles commands config.status:1524: cd tests && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/tests' make[2]: Leaving directory '/<>/tests' config.status:1529: $? = 0 config.status:1524: cd src/util && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/src/util' make[2]: Leaving directory '/<>/src/util' config.status:1529: $? = 0 config.status:1524: cd src/matrices && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/src/matrices' make[2]: Leaving directory '/<>/src/matrices' config.status:1529: $? = 0 config.status:1524: cd src/matrixio && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/src/matrixio' make[2]: Leaving directory '/<>/src/matrixio' config.status:1529: $? = 0 config.status:1524: cd src/maxwell && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/src/maxwell' make[2]: Leaving directory '/<>/src/maxwell' config.status:1529: $? = 0 config.status:1524: cd mpb && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/mpb' make[2]: Leaving directory '/<>/mpb' config.status:1529: $? = 0 config.status:1524: cd utils && sed -e '/# am--include-marker/d' Makefile | make -f - am--depfiles make[2]: Entering directory '/<>/utils' make[2]: Leaving directory '/<>/utils' config.status:1529: $? = 0 config.status:1447: executing libtool commands ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_c_inline=inline ac_cv_env_CC_set=set ac_cv_env_CC_value=mpicc ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value='-g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC' ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value='-Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi' ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_F77_set=set ac_cv_env_F77_value=gfortran ac_cv_env_FFLAGS_set=set ac_cv_env_FFLAGS_value='-g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong' ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_MPICC_set= ac_cv_env_MPICC_value= ac_cv_env_build_alias_set=set ac_cv_env_build_alias_value=x86_64-linux-gnu ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=yes ac_cv_f77_dummy_main=none ac_cv_f77_libs=' -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath' ac_cv_f77_mangling='lower case, underscore, no extra underscore' ac_cv_fortran_dummy_main=none ac_cv_func_cheev_=no ac_cv_func_feenableexcept=yes ac_cv_func_getopt=yes ac_cv_func_scm_array_get_handle=yes ac_cv_func_scm_is_array=yes ac_cv_func_scm_make_smob_type=yes ac_cv_func_strncmp=yes ac_cv_header_ctl_h=yes ac_cv_header_ctlgeom_h=yes ac_cv_header_dlfcn_h=yes ac_cv_header_getopt_h=yes ac_cv_header_guile_gh_h=no ac_cv_header_hdf5_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_libguile_h=yes ac_cv_header_nlopt_h=no ac_cv_header_stdint_h=yes ac_cv_header_stdio_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_atlas_ATL_xerbla=no ac_cv_lib_blas_sgemm_=yes ac_cv_lib_complib_sgimath_sgemm_=no ac_cv_lib_ctl_ctl_get_vector3=yes ac_cv_lib_ctlgeom_vector3_dot=yes ac_cv_lib_cxml_sgemm_=no ac_cv_lib_dgemm_dgemm_=no ac_cv_lib_dxml_sgemm_=no ac_cv_lib_essl_sgemm_=no ac_cv_lib_fftw3_fftw_execute=yes ac_cv_lib_hdf5_H5Pcreate=yes ac_cv_lib_lapack_cheev_=yes ac_cv_lib_m_sqrt=yes ac_cv_lib_mkl_sgemm_=no ac_cv_lib_nlopt_nlopt_minimize=no ac_cv_lib_openblas_sgemm_=no ac_cv_lib_scs_sgemm_=no ac_cv_lib_z_deflate=yes ac_cv_objext=o ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_GREP=/usr/bin/grep ac_cv_path_PERL=/usr/bin/perl ac_cv_path_SED=/usr/bin/sed ac_cv_path_SH_JOB=/bin/bash ac_cv_path_install='/usr/bin/install -c' ac_cv_path_lt_DD=/usr/bin/dd ac_cv_path_mkdir=/usr/bin/mkdir ac_cv_prog_AWK=mawk ac_cv_prog_CC=mpicc ac_cv_prog_CPP='mpicc -E' ac_cv_prog_GEN_CTL_IO=gen-ctl-io ac_cv_prog_GUILE_CONFIG=guile-config ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=mpicc ac_cv_prog_ac_ct_FILECMD=file ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c11= ac_cv_prog_cc_g=yes ac_cv_prog_cc_stdc= ac_cv_prog_f77_g=yes ac_cv_prog_f77_v=-v ac_cv_prog_guile_ok=yes ac_cv_prog_make_make_set=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes lt_cv_ar_at_file=@ lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_F77=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_F77=-fPIC lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_F77=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=no lt_cv_prog_compiler_static_works_F77=yes lt_cv_prog_gnu_ld=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=yes lt_cv_sys_global_symbol_pipe='/usr/bin/sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | /usr/bin/sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='/usr/bin/sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='/usr/bin/sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='/usr/bin/sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=1572864 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/usr/bin/dd bs=4096 count=1' ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} '\''/<>/missing'\'' aclocal-1.16' ACTIVATE_READLINE='(use-modules (ice-9 readline)) (activate-readline)' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} '\''/<>/missing'\'' autoconf' AUTOHEADER='${SHELL} '\''/<>/missing'\'' autoheader' AUTOMAKE='${SHELL} '\''/<>/missing'\'' automake-1.16' AWK='mawk' BLAS_LIBS='-lblas' CC='mpicc' CCDEPMODE='depmode=gcc3' CFLAGS='-g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic' CPP='mpicc -E' CPPFLAGS='-Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi' CSCOPE='cscope' CTAGS='ctags' CTLGEOM_H_CPPFLAG=' ' CTL_H_CPPFLAG=' ' CYGPATH_W='echo' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DLLTOOL='false' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/usr/bin/grep -E' EIGS_FLAGS_SCM='(define EIGS_VERBOSE (pow2 0))(define EIGS_PROJECT_PRECONDITIONING (pow2 1))(define EIGS_RESET_CG (pow2 2))(define EIGS_FORCE_EXACT_LINMIN (pow2 3))(define EIGS_FORCE_APPROX_LINMIN (pow2 4))(define EIGS_ORTHONORMALIZE_FIRST_STEP (pow2 5))(define EIGS_REORTHOGONALIZE (pow2 6))(define EIGS_DYNAMIC_RESET_CG (pow2 7))(define EIGS_ORTHOGONAL_PRECONDITIONER (pow2 8))(define EIGS_DEFAULT_FLAGS (+ EIGS_RESET_CG EIGS_REORTHOGONALIZE))' ETAGS='etags' EXEEXT='' F77='gfortran' FFLAGS='-g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong' FGREP='/usr/bin/grep -F' FILECMD='file' FLIBS=' -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath' GEN_CTL_IO='gen-ctl-io' GREP='/usr/bin/grep' GUILE_CONFIG='guile-config' GUILE_CPPFLAGS='-I/usr/include/guile/3.0 ' GUILE_LIBS='-lguile-3.0 -lgc -lpthread -ldl ' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LAPACK_LIBS='-llapack' LD='/usr/bin/ld -m elf_x86_64' LDFLAGS='-Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi' LIBCTL_DIR='/usr/share/libctl' LIBOBJS='' LIBS='-lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' MAINT='' MAINTAINER_MODE_FALSE='#' MAINTAINER_MODE_TRUE='' MAKEINFO='${SHELL} '\''/<>/missing'\'' makeinfo' MANIFEST_TOOL=':' MKDIR_P='/usr/bin/mkdir -p' MPB_SUFFIX='' MPB_VERSION='1.11.1' MPICC='' MPILIBS='' MPIRUN='' MPI_FALSE='' MPI_TRUE='#' NLOPT_LIB='' NM='/usr/bin/nm -B' NMEDIT='' OBJDUMP='objdump' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='mpb' PACKAGE_BUGREPORT='' PACKAGE_NAME='mpb' PACKAGE_STRING='mpb 1.11.1' PACKAGE_TARNAME='mpb' PACKAGE_URL='' PACKAGE_VERSION='1.11.1' PATH_SEPARATOR=':' PERL='/usr/bin/perl' RANLIB='ranlib' RUNCODE='' SCALAR_TYPE='complex' SED='/usr/bin/sed' SET_MAKE='' SHARED_VERSION_INFO='5:1:4' SHELL='/bin/bash' SH_JOB='/bin/bash' STRIP='strip' VERSION='1.11.1' WITH_LIBCTLGEOM_FALSE='#' WITH_LIBCTLGEOM_TRUE='' WITH_LIBCTL_FALSE='#' WITH_LIBCTL_TRUE='' ac_ct_AR='ar' ac_ct_CC='mpicc' ac_ct_DUMPBIN='' ac_ct_F77='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='x86_64-linux-gnu' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' guile_ok='yes' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /<>/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${prefix}/share/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/usr' program_transform_name='s,_,-,g;s,x,x,' psdir='${docdir}' runstatedir='${localstatedir}/run' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "mpb" #define PACKAGE_TARNAME "mpb" #define PACKAGE_VERSION "1.11.1" #define PACKAGE_STRING "mpb 1.11.1" #define PACKAGE_BUGREPORT "" #define PACKAGE_URL "" #define MPB_VERSION_MAJOR 1 #define MPB_VERSION_MINOR 11 #define MPB_VERSION_PATCH 1 #define PACKAGE "mpb" #define VERSION "1.11.1" #define HAVE_STDIO_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_STRINGS_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_UNISTD_H 1 #define STDC_HEADERS 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define SCALAR_COMPLEX 1 #define HAVE_LIBM 1 #define F77_FUNC(name,NAME) name ## _ #define F77_FUNC_(name,NAME) name ## _ #define HAVE_LIBFFTW3 1 #define HAVE_BLAS 1 #define HAVE_LAPACK 1 #define HAVE_LIBZ 1 #define HAVE_HDF5_H 1 #define HAVE_HDF5 1 #define HAVE_LIBGUILE_H 1 #define HAVE_SCM_MAKE_SMOB_TYPE 1 #define HAVE_SCM_ARRAY_GET_HANDLE 1 #define HAVE_SCM_IS_ARRAY 1 #define HAVE_SCM_SMOB_PREDICATE 1 #define HAVE_SCM_SMOB_DATA 1 #define HAVE_SCM_NEWSMOB 1 #define HAVE_LIBCTL 1 #define HAVE_LIBCTL_QUIET 1 #define HAVE_UNISTD_H 1 #define HAVE_GETOPT_H 1 #define HAVE_GETOPT 1 #define HAVE_STRNCMP 1 #define NO_FORTRAN_FUNCTIONS 1 #define HAVE_FEENABLEEXCEPT 1 #define HAVE_DECL_FEENABLEEXCEPT 1 configure: exit 0 dh_auto_build make -j4 make[2]: Entering directory '/<>' CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash '/<>/missing' aclocal-1.16 -I m4 CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash '/<>/missing' autoconf cd . && /bin/bash /<>/missing automake-1.16 --foreign configure.ac:4: warning: The macro `AC_CONFIG_HEADER' is obsolete. configure.ac:4: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:4: the top level configure.ac:23: warning: The macro `AM_ENABLE_SHARED' is obsolete. configure.ac:23: You should run autoupdate. m4/ltoptions.m4:205: AM_ENABLE_SHARED is expanded from... configure.ac:23: the top level configure.ac:24: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:24: You should run autoupdate. m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from... configure.ac:24: the top level configure.ac:39: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:39: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:39: the top level configure.ac:45: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:45: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:45: the top level configure.ac:51: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:51: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:51: the top level configure.ac:57: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:57: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:57: the top level configure.ac:62: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:62: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:62: the top level configure.ac:68: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:68: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... configure.ac:68: the top level configure.ac:73: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:73: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:73: the top level configure.ac:86: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:86: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:86: the top level configure.ac:103: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:103: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:103: the top level configure.ac:124: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:124: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:124: the top level configure.ac:125: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:125: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:125: the top level configure.ac:170: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:170: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:170: the top level configure.ac:201: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.ac:201: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... m4/ax_mpi.m4:69: AX_MPI is expanded from... configure.ac:201: the top level configure.ac:258: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:258: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:258: the top level configure.ac:277: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:277: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... configure.ac:277: the top level configure.ac:324: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:324: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:324: the top level configure.ac:337: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:337: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:337: the top level configure.ac:350: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:350: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:350: the top level configure.ac:512: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:512: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:512: the top level configure.ac:528: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:528: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... configure.ac:528: the top level configure.ac:583: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.ac:583: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... configure.ac:583: the top level /bin/bash ./config.status --recheck running CONFIG_SHELL=/bin/bash /bin/bash ./configure --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode build_alias=x86_64-linux-gnu CC=mpicc CFLAGS=-g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC LDFLAGS=-Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi CPPFLAGS=-Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi F77=gfortran FFLAGS=-g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong --no-create --no-recursion configure: loading cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... (cached) /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... (cached) /usr/bin/mkdir -p checking for gawk... (cached) mawk checking whether make sets $(MAKE)... (cached) yes checking whether make supports nested variables... (cached) yes checking whether make supports nested variables... (cached) yes checking build system type... (cached) x86_64-pc-linux-gnu checking host system type... (cached) x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... (cached) o checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/grep -E checking for fgrep... (cached) /usr/bin/grep -F checking for ld used by mpicc... (cached) /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... (cached) yes checking for BSD- or MS-compatible name lister (nm)... (cached) /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... (cached) func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... (cached) func_convert_file_noop checking for /usr/bin/ld option to reload object files... (cached) -r checking for file... (cached) file checking for objdump... (cached) objdump checking how to recognize dependent libraries... (cached) pass_all checking for dlltool... no checking how to associate runtime and link libraries... (cached) printf %s\n checking for ar... (cached) ar checking for archiver @FILE support... (cached) @ checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from mpicc object... (cached) ok checking for sysroot... no checking for a working dd... (cached) /usr/bin/dd checking how to truncate binary pipes... (cached) /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... (cached) no checking for stdio.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for strings.h... (cached) yes checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... (cached) .libs checking if mpicc supports -fno-rtti -fno-exceptions... (cached) no checking for mpicc option to produce PIC... (cached) -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... (cached) yes checking if mpicc static flag -static works... (cached) no checking if mpicc supports -c -o file.o... (cached) yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether the compiler supports GNU Fortran 77... (cached) yes checking whether gfortran accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... (cached) -fPIC checking if gfortran PIC flag -fPIC works... (cached) yes checking if gfortran static flag -static works... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... (cached) /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... (cached) mpicc checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for sqrt in -lm... (cached) yes checking how to get verbose linking output from gfortran... (cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... (cached) none checking for Fortran 77 name-mangling scheme... (cached) lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... (cached) yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... (cached) no checking for ATL_xerbla in -latlas... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for dgemm_ in -ldgemm... (cached) no checking for sgemm_ in -lmkl... (cached) no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... (cached) no checking for sgemm_ in -ldxml... (cached) no checking for sgemm_ in -lscs... (cached) no checking for sgemm_ in -lcomplib.sgimath... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... (cached) no checking for cheev_ in -llapack... (cached) yes checking for deflate in -lz... (cached) yes checking for H5Pcreate in -lhdf5... (cached) yes checking for hdf5.h... (cached) yes checking for guile... (cached) yes checking for guile-config... (cached) guile-config checking if linking to guile works... yes checking for libguile.h... (cached) yes checking for guile/gh.h... (cached) no checking for scm_make_smob_type... (cached) yes checking for scm_array_get_handle... (cached) yes checking for scm_is_array... (cached) yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... (cached) gen-ctl-io checking for ctl_get_vector3 in -lctl... (cached) yes checking for ctl.h... (cached) yes checking whether libctl version is at least 4.0.0... checking how to run the C preprocessor... (cached) mpicc -E ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... (cached) yes checking for ctlgeom.h... (cached) yes checking for nlopt.h... (cached) no checking for nlopt_minimize in -lnlopt... (cached) no checking for egrep... (cached) /usr/bin/grep -E checking for unistd.h... (cached) yes checking for getopt.h... (cached) yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... (cached) yes checking for inline... (cached) inline checking for getopt... (cached) yes checking for strncmp... (cached) yes checking whether calling BLAS zdotc works... yes checking for bash... (cached) /bin/bash checking for feenableexcept... (cached) yes checking whether feenableexcept declaration is usable... yes checking that generated files are newer than configure... done configure: creating ./config.status /bin/bash ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: src/mpbconf.h is unchanged config.status: executing depfiles commands config.status: executing libtool commands (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash '/<>/missing' autoheader) rm -f stamp-h1 touch config.h.in cd . && /bin/bash ./config.status config.h config.status: creating config.h config.status: config.h is unchanged make all-recursive make[3]: Entering directory '/<>' Making all in src make[4]: Entering directory '/<>/src' cp -f mpbconf.h mpb.h make all-recursive make[5]: Entering directory '/<>/src' Making all in util make[6]: Entering directory '/<>/src/util' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT sphere-quad.o -MD -MP -MF .deps/sphere-quad.Tpo -c -o sphere-quad.o sphere-quad.c mv -f .deps/sphere-quad.Tpo .deps/sphere-quad.Po /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -llapack -lblas -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../../src/util/sphere_quad) > sphere-quad.h make all-am make[7]: Entering directory '/<>/src/util' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c -o debug_malloc.lo debug_malloc.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c -o mpi_utils.lo mpi_utils.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c -o verbosity.lo verbosity.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c mpi_utils.c -o mpi_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c debug_malloc.c -o debug_malloc.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c verbosity.c -o verbosity.o mpi_utils.c: In function ‘mpi_begin_critical_section’: mv -f .deps/verbosity.Tpo .deps/verbosity.Plo mpi_utils.c:202:22: warning: unused variable ‘status’ [-Wunused-variable] 202 | MPI_Status status; | ^~~~~~ mpi_utils.c: In function ‘mpi_end_critical_section’: mpi_utils.c:210:35: warning: unused parameter ‘tag’ [-Wunused-parameter] 210 | void mpi_end_critical_section(int tag) | ~~~~^~~ mpi_utils.c: In function ‘mpi_one_printf’: mpi_utils.c:139:10: warning: ignoring return value of ‘vasprintf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 139 | vasprintf(&s, template, ap); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mv -f .deps/debug_malloc.Tpo .deps/debug_malloc.Plo mv -f .deps/mpi_utils.Tpo .deps/mpi_utils.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libutil.la debug_malloc.lo mpi_utils.lo verbosity.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libutil.a debug_malloc.o mpi_utils.o verbosity.o libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' Making all in matrices make[6]: Entering directory '/<>/src/matrices' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c -o libmatrices_la-blasglue.lo `test -f 'blasglue.c' || echo './'`blasglue.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c -o libmatrices_la-eigensolver.lo `test -f 'eigensolver.c' || echo './'`eigensolver.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c -o libmatrices_la-eigensolver_davidson.lo `test -f 'eigensolver_davidson.c' || echo './'`eigensolver_davidson.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c -o libmatrices_la-eigensolver_utils.lo `test -f 'eigensolver_utils.c' || echo './'`eigensolver_utils.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c eigensolver.c -o libmatrices_la-eigensolver.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c blasglue.c -o libmatrices_la-blasglue.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c eigensolver_davidson.c -o libmatrices_la-eigensolver_davidson.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c eigensolver_utils.c -o libmatrices_la-eigensolver_utils.o mv -f .deps/libmatrices_la-eigensolver_utils.Tpo .deps/libmatrices_la-eigensolver_utils.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c -o libmatrices_la-evectmatrix.lo `test -f 'evectmatrix.c' || echo './'`evectmatrix.c mv -f .deps/libmatrices_la-blasglue.Tpo .deps/libmatrices_la-blasglue.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c -o libmatrices_la-linmin.lo `test -f 'linmin.c' || echo './'`linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c evectmatrix.c -o libmatrices_la-evectmatrix.o mv -f .deps/libmatrices_la-eigensolver_davidson.Tpo .deps/libmatrices_la-eigensolver_davidson.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c -o libmatrices_la-matrices.lo `test -f 'matrices.c' || echo './'`matrices.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c linmin.c -o libmatrices_la-linmin.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c matrices.c -o libmatrices_la-matrices.o mv -f .deps/libmatrices_la-linmin.Tpo .deps/libmatrices_la-linmin.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c -o libmatrices_la-minpack2-linmin.lo `test -f 'minpack2-linmin.c' || echo './'`minpack2-linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c minpack2-linmin.c -o libmatrices_la-minpack2-linmin.o mv -f .deps/libmatrices_la-evectmatrix.Tpo .deps/libmatrices_la-evectmatrix.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c -o libmatrices_la-sqmatrix.lo `test -f 'sqmatrix.c' || echo './'`sqmatrix.c mv -f .deps/libmatrices_la-matrices.Tpo .deps/libmatrices_la-matrices.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c sqmatrix.c -o libmatrices_la-sqmatrix.o mv -f .deps/libmatrices_la-minpack2-linmin.Tpo .deps/libmatrices_la-minpack2-linmin.Plo mv -f .deps/libmatrices_la-sqmatrix.Tpo .deps/libmatrices_la-sqmatrix.Plo mv -f .deps/libmatrices_la-eigensolver.Tpo .deps/libmatrices_la-eigensolver.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmatrices.la libmatrices_la-blasglue.lo libmatrices_la-eigensolver.lo libmatrices_la-eigensolver_davidson.lo libmatrices_la-eigensolver_utils.lo libmatrices_la-evectmatrix.lo libmatrices_la-linmin.lo libmatrices_la-matrices.lo libmatrices_la-minpack2-linmin.lo libmatrices_la-sqmatrix.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmatrices.a libmatrices_la-blasglue.o libmatrices_la-eigensolver.o libmatrices_la-eigensolver_davidson.o libmatrices_la-eigensolver_utils.o libmatrices_la-evectmatrix.o libmatrices_la-linmin.o libmatrices_la-matrices.o libmatrices_la-minpack2-linmin.o libmatrices_la-sqmatrix.o libtool: link: ranlib .libs/libmatrices.a libtool: link: ( cd ".libs" && rm -f "libmatrices.la" && ln -s "../libmatrices.la" "libmatrices.la" ) make[6]: Leaving directory '/<>/src/matrices' Making all in matrixio make[6]: Entering directory '/<>/src/matrixio' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-evectmatrixio.o -MD -MP -MF .deps/libmatrixio_a-evectmatrixio.Tpo -c -o libmatrixio_a-evectmatrixio.o `test -f 'evectmatrixio.c' || echo './'`evectmatrixio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-fieldio.o -MD -MP -MF .deps/libmatrixio_a-fieldio.Tpo -c -o libmatrixio_a-fieldio.o `test -f 'fieldio.c' || echo './'`fieldio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-matrixio.o -MD -MP -MF .deps/libmatrixio_a-matrixio.Tpo -c -o libmatrixio_a-matrixio.o `test -f 'matrixio.c' || echo './'`matrixio.c matrixio.c: In function ‘matrixio_create_sub’: matrixio.c:469:24: warning: statement with no effect [-Wunused-value] 469 | IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); | ^ matrixio.c:58:32: note: in definition of macro ‘IF_EXCLUSIVE’ 58 | # define IF_EXCLUSIVE(yes,no) yes | ^~~ matrixio.c:472:24: warning: statement with no effect [-Wunused-value] 472 | IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); | ^ matrixio.c:58:32: note: in definition of macro ‘IF_EXCLUSIVE’ 58 | # define IF_EXCLUSIVE(yes,no) yes | ^~~ In file included from matrixio.c:29: matrixio.c: In function ‘matrixio_open_dataset’: matrixio.c:516:30: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 516 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ matrixio.c: In function ‘matrixio_create_dataset’: matrixio.c:552:24: warning: statement with no effect [-Wunused-value] 552 | IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); | ^ matrixio.c:58:32: note: in definition of macro ‘IF_EXCLUSIVE’ 58 | # define IF_EXCLUSIVE(yes,no) yes | ^~~ fieldio.c:41:46: warning: argument 8 of type ‘const real *’ {aka ‘const double *’} declared as a pointer [-Warray-parameter=] 41 | const real *kvector, | ~~~~~~~~~~~~^~~~~~~ matrixio.c: In function ‘matrixio_read_real_data’: In file included from fieldio.c:28: matrixio.h:95:52: note: previously declared as an array ‘const real[3]’ {aka ‘const double[3]’} 95 | const real kvector[3], | ~~~~~~~~~~~^~~~~~~~~~ matrixio.c:837:35: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 837 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ mv -f .deps/libmatrixio_a-evectmatrixio.Tpo .deps/libmatrixio_a-evectmatrixio.Po mv -f .deps/libmatrixio_a-fieldio.Tpo .deps/libmatrixio_a-fieldio.Po mv -f .deps/libmatrixio_a-matrixio.Tpo .deps/libmatrixio_a-matrixio.Po rm -f libmatrixio.a ar cru libmatrixio.a libmatrixio_a-evectmatrixio.o libmatrixio_a-fieldio.o libmatrixio_a-matrixio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmatrixio.a make[6]: Leaving directory '/<>/src/matrixio' Making all in maxwell make[6]: Entering directory '/<>/src/maxwell' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c -o libmaxwell_la-maxwell.lo `test -f 'maxwell.c' || echo './'`maxwell.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c -o libmaxwell_la-maxwell_constraints.lo `test -f 'maxwell_constraints.c' || echo './'`maxwell_constraints.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c -o libmaxwell_la-maxwell_eps.lo `test -f 'maxwell_eps.c' || echo './'`maxwell_eps.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c -o libmaxwell_la-maxwell_op.lo `test -f 'maxwell_op.c' || echo './'`maxwell_op.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c maxwell.c -o libmaxwell_la-maxwell.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c maxwell_constraints.c -o libmaxwell_la-maxwell_constraints.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c maxwell_eps.c -o libmaxwell_la-maxwell_eps.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c maxwell_op.c -o libmaxwell_la-maxwell_op.o maxwell_eps.c: In function ‘set_maxwell_dielectric’: maxwell_eps.c:395:16: warning: unused variable ‘k’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:13: warning: unused variable ‘j’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:10: warning: unused variable ‘i’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c: At top level: maxwell_eps.c:181:12: warning: ‘sym_matrix_eq’ defined but not used [-Wunused-function] 181 | static int sym_matrix_eq(symmetric_matrix V1, symmetric_matrix V2, double tol) | ^~~~~~~~~~~~~ maxwell_op.c: In function ‘maxwell_compute_fft’: maxwell_op.c:187:21: warning: variable ‘np’ set but not used [-Wunused-but-set-variable] 187 | ptrdiff_t np[3]; | ^~ maxwell_op.c:177:12: warning: unused variable ‘rarray_out’ [-Wunused-variable] 177 | real *rarray_out = (real *) array_out; | ^~~~~~~~~~ maxwell_op.c:175:12: warning: unused variable ‘rarray_in’ [-Wunused-variable] 175 | real *rarray_in = (real *) array_in; | ^~~~~~~~~ maxwell_op.c: In function ‘maxwell_vectorfield_otherhalf’: maxwell_op.c:637:50: warning: unused parameter ‘d’ [-Wunused-parameter] 637 | void maxwell_vectorfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~^ maxwell_op.c:637:69: warning: unused parameter ‘field’ [-Wunused-parameter] 637 | void maxwell_vectorfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~~~^~~~~ maxwell_op.c:638:41: warning: unused parameter ‘phasex’ [-Wunused-parameter] 638 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:638:54: warning: unused parameter ‘phasey’ [-Wunused-parameter] 638 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:638:67: warning: unused parameter ‘phasez’ [-Wunused-parameter] 638 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c: In function ‘maxwell_cscalarfield_otherhalf’: maxwell_op.c:841:51: warning: unused parameter ‘d’ [-Wunused-parameter] 841 | void maxwell_cscalarfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~^ maxwell_op.c:841:70: warning: unused parameter ‘field’ [-Wunused-parameter] 841 | void maxwell_cscalarfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~~~^~~~~ maxwell_op.c:842:42: warning: unused parameter ‘phasex’ [-Wunused-parameter] 842 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:842:55: warning: unused parameter ‘phasey’ [-Wunused-parameter] 842 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:842:68: warning: unused parameter ‘phasez’ [-Wunused-parameter] 842 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c: In function ‘maxwell_scalarfield_otherhalf’: maxwell_op.c:1042:50: warning: unused parameter ‘d’ [-Wunused-parameter] 1042 | void maxwell_scalarfield_otherhalf(maxwell_data *d, real *field) | ~~~~~~~~~~~~~~^ maxwell_op.c:1042:59: warning: unused parameter ‘field’ [-Wunused-parameter] 1042 | void maxwell_scalarfield_otherhalf(maxwell_data *d, real *field) | ~~~~~~^~~~~ mv -f .deps/libmaxwell_la-maxwell.Tpo .deps/libmaxwell_la-maxwell.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c -o libmaxwell_la-maxwell_pre.lo `test -f 'maxwell_pre.c' || echo './'`maxwell_pre.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c maxwell_pre.c -o libmaxwell_la-maxwell_pre.o mv -f .deps/libmaxwell_la-maxwell_constraints.Tpo .deps/libmaxwell_la-maxwell_constraints.Plo mv -f .deps/libmaxwell_la-maxwell_eps.Tpo .deps/libmaxwell_la-maxwell_eps.Plo mv -f .deps/libmaxwell_la-maxwell_op.Tpo .deps/libmaxwell_la-maxwell_op.Plo mv -f .deps/libmaxwell_la-maxwell_pre.Tpo .deps/libmaxwell_la-maxwell_pre.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmaxwell.la libmaxwell_la-maxwell.lo libmaxwell_la-maxwell_constraints.lo libmaxwell_la-maxwell_eps.lo libmaxwell_la-maxwell_op.lo libmaxwell_la-maxwell_pre.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmaxwell.a libmaxwell_la-maxwell.o libmaxwell_la-maxwell_constraints.o libmaxwell_la-maxwell_eps.o libmaxwell_la-maxwell_op.o libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmaxwell.a libtool: link: ( cd ".libs" && rm -f "libmaxwell.la" && ln -s "../libmaxwell.la" "libmaxwell.la" ) make[6]: Leaving directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -no-undefined -version-info 5:1:4 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmpb.la -rpath /usr/lib util/libutil.la matrices/libmatrices.la maxwell/libmaxwell.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: (cd .libs/libmpb.lax/libutil.a && ar x "/<>/src/util/.libs/libutil.a") libtool: link: (cd .libs/libmpb.lax/libmatrices.a && ar x "/<>/src/matrices/.libs/libmatrices.a") libtool: link: (cd .libs/libmpb.lax/libmaxwell.a && ar x "/<>/src/maxwell/.libs/libmaxwell.a") libtool: link: ar cr .libs/libmpb.a .libs/libmpb.lax/libutil.a/debug_malloc.o .libs/libmpb.lax/libutil.a/mpi_utils.o .libs/libmpb.lax/libutil.a/verbosity.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-blasglue.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-eigensolver.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-eigensolver_davidson.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-eigensolver_utils.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-evectmatrix.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-linmin.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-matrices.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-minpack2-linmin.o .libs/libmpb.lax/libmatrices.a/libmatrices_la-sqmatrix.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell_constraints.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell_eps.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell_op.o .libs/libmpb.lax/libmaxwell.a/libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmpb.a libtool: link: rm -fr .libs/libmpb.lax libtool: link: ( cd ".libs" && rm -f "libmpb.la" && ln -s "../libmpb.la" "libmpb.la" ) make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' Making all in tests make[4]: Entering directory '/<>/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT malloctest.o -MD -MP -MF .deps/malloctest.Tpo -c -o malloctest.o malloctest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT blastest.o -MD -MP -MF .deps/blastest.Tpo -c -o blastest.o blastest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT eigs_test.o -MD -MP -MF .deps/eigs_test.Tpo -c -o eigs_test.o eigs_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT maxwell_test.o -MD -MP -MF .deps/maxwell_test.Tpo -c -o maxwell_test.o maxwell_test.c eigs_test.c: In function ‘Aop’: eigs_test.c:293:51: warning: unused parameter ‘data’ [-Wunused-parameter] 293 | void Aop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:294:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:294:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Bop’: eigs_test.c:303:51: warning: unused parameter ‘data’ [-Wunused-parameter] 303 | void Bop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:304:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:304:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Ainvop’: eigs_test.c:313:54: warning: unused parameter ‘data’ [-Wunused-parameter] 313 | void Ainvop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:314:25: warning: unused parameter ‘Y’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:314:34: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c:314:54: warning: unused parameter ‘YtY’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~^~~ eigs_test.c: In function ‘Cop_old’: eigs_test.c:324:55: warning: unused parameter ‘data’ [-Wunused-parameter] 324 | void Cop_old(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:325:22: warning: unused parameter ‘Y’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:325:31: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c: In function ‘Cop’: eigs_test.c:349:51: warning: unused parameter ‘data’ [-Wunused-parameter] 349 | void Cop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:350:23: warning: unused parameter ‘Y’ [-Wunused-parameter] 350 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ mv -f .deps/malloctest.Tpo .deps/malloctest.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT normal_vectors-normal_vectors.o -MD -MP -MF .deps/normal_vectors-normal_vectors.Tpo -c -o normal_vectors-normal_vectors.o `test -f 'normal_vectors.c' || echo './'`normal_vectors.c mv -f .deps/blastest.Tpo .deps/blastest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/normal_vectors-normal_vectors.Tpo .deps/normal_vectors-normal_vectors.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/maxwell_test.Tpo .deps/maxwell_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/eigs_test.Tpo .deps/eigs_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/libmpb.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/<>/tests' Making all in mpb make[4]: Entering directory '/<>/mpb' cp -f /usr/share/libctl/base/main.c main.c cp -f /usr/share/libctl/utils/geom.c geom.c gen-ctl-io --header -o ctl-io.h mpb.scm /usr/share/libctl gen-ctl-io --code -o ctl-io.c mpb.scm /usr/share/libctl /usr/bin/perl -pe 's/epsilon/mu/g;s/eps_inv/mu_inv/g' epsilon.c > mu.c ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" make all-am make[5]: Entering directory '/<>/mpb' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-medium.o -MD -MP -MF .deps/mpb-medium.Tpo -c -o mpb-medium.o `test -f 'medium.c' || echo './'`medium.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-epsilon_file.o -MD -MP -MF .deps/mpb-epsilon_file.Tpo -c -o mpb-epsilon_file.o `test -f 'epsilon_file.c' || echo './'`epsilon_file.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-field-smob.o -MD -MP -MF .deps/mpb-field-smob.Tpo -c -o mpb-field-smob.o `test -f 'field-smob.c' || echo './'`field-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-fields.o -MD -MP -MF .deps/mpb-fields.Tpo -c -o mpb-fields.o `test -f 'fields.c' || echo './'`fields.c field-smob.c: In function ‘integrate_fieldL’: field-smob.c:407:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ field-smob.c:407:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ field-smob.c:407:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ field-smob.c:407:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ field-smob.c: At top level: field-smob.c:395:17: warning: ‘cvector3_conj’ defined but not used [-Wunused-function] 395 | static cvector3 cvector3_conj(cvector3 c) | ^~~~~~~~~~~~~ In file included from medium.c:75: epsilon.c: In function ‘get_epsilon’: epsilon.c:434:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ epsilon.c:434:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ epsilon.c:434:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ epsilon.c:434:26: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ epsilon.c:434:16: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ In file included from medium.c:76: mu.c: In function ‘get_mu’: mu.c:434:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ mu.c:434:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ mu.c:434:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ mu.c:434:26: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ mu.c:434:16: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ fields.c: In function ‘compute_field_energy_internal’: fields.c:229:50: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ fields.c:229:46: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:229:42: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:229:25: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ fields.c:229:15: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ In file included from fields.c:25: fields.c: In function ‘fix_field_phase’: ../src/util/mpiglue.h:54:17: warning: comparison between two arrays [-Warray-compare] 54 | CHECK((sb) != (rb), "MPI_Allreduce doesn't work for sendbuf == recvbuf");\ | ^~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:465:6: note: in expansion of macro ‘mpi_allreduce’ 465 | mpi_allreduce(sq_sum2, sq_sum, 2, real, SCALAR_MPI_TYPE, | ^~~~~~~~~~~~~ ../src/util/mpiglue.h:54:17: note: use ‘&sq_sum2[0] != &sq_sum[0]’ to compare the addresses 54 | CHECK((sb) != (rb), "MPI_Allreduce doesn't work for sendbuf == recvbuf");\ | ^~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:465:6: note: in expansion of macro ‘mpi_allreduce’ 465 | mpi_allreduce(sq_sum2, sq_sum, 2, real, SCALAR_MPI_TYPE, | ^~~~~~~~~~~~~ fields.c: In function ‘get_val’: fields.c:557:25: warning: unused parameter ‘nx’ [-Wunused-parameter] 557 | int nx, int ny, int nz, int last_dim_size, | ~~~~^~ fields.c:557:49: warning: unused parameter ‘last_dim_size’ [-Wunused-parameter] 557 | int nx, int ny, int nz, int last_dim_size, | ~~~~^~~~~~~~~~~~~ fields.c: In function ‘compute_energy_in_dielectric’: fields.c:873:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ fields.c:873:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:873:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:873:26: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ fields.c:873:16: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ fields.c: In function ‘output_scalarfield’: fields.c:946:36: warning: unused parameter ‘last_dim_index’ [-Wunused-parameter] 946 | int last_dim_index, | ~~~~^~~~~~~~~~~~~~ fields.c:947:36: warning: unused parameter ‘last_dim_start’ [-Wunused-parameter] 947 | int last_dim_start, int last_dim_size, | ~~~~^~~~~~~~~~~~~~ fields.c:947:56: warning: unused parameter ‘last_dim_size’ [-Wunused-parameter] 947 | int last_dim_start, int last_dim_size, | ~~~~^~~~~~~~~~~~~ fields.c:948:36: warning: unused parameter ‘first_dim_start’ [-Wunused-parameter] 948 | int first_dim_start, int first_dim_size, | ~~~~^~~~~~~~~~~~~~~ fields.c:948:57: warning: unused parameter ‘first_dim_size’ [-Wunused-parameter] 948 | int first_dim_start, int first_dim_size, | ~~~~^~~~~~~~~~~~~~ fields.c:949:36: warning: unused parameter ‘write_start0_special’ [-Wunused-parameter] 949 | int write_start0_special) | ~~~~^~~~~~~~~~~~~~~~~~~~ fields.c: In function ‘compute_energy_in_object_list’: fields.c:1322:6: warning: ‘geom_fix_objects0’ is deprecated [-Wdeprecated-declarations] 1322 | geom_fix_objects0(objects); | ^~~~~~~~~~~~~~~~~ In file included from fields.c:33: /usr/include/ctlgeom.h:65:13: note: declared here 65 | extern void geom_fix_objects0(GEOMETRIC_OBJECT_LIST geometry) CTLGEOM_DEPRECATED; | ^~~~~~~~~~~~~~~~~ fields.c:1309:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ fields.c:1309:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1309:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1309:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1309:16: warning: unused variable ‘k’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1309:13: warning: unused variable ‘j’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1309:10: warning: unused variable ‘i’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_field_integral’: fields.c:1377:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ fields.c:1377:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1377:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1377:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1377:16: warning: unused variable ‘k’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:13: warning: unused variable ‘j’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:10: warning: unused variable ‘i’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ mv -f .deps/mpb-epsilon_file.Tpo .deps/mpb-epsilon_file.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-material_grid.o -MD -MP -MF .deps/mpb-material_grid.Tpo -c -o mpb-material_grid.o `test -f 'material_grid.c' || echo './'`material_grid.c mu.c: In function ‘mean_mu_func’: mu.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ mu.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ material_grid.c: In function ‘material_grids_addgradient’: material_grid.c:390:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ material_grid.c:390:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:390:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:390:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ material_grid.c:390:16: warning: unused variable ‘k’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:13: warning: unused variable ‘j’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: In function ‘print_material_grids_deps_du_numeric’: material_grid.c:634:14: warning: unused variable ‘foo’ [-Wunused-variable] 634 | double *foo; | ^~~ In file included from material_grid.c:25: material_grid.c: In function ‘synchronize_material_grid’: ../src/util/mpiglue.h:58:40: warning: statement with no effect [-Wunused-value] 58 | #define MPI_Bcast(b, n, t, root, comm) 0 | ^ material_grid.c:693:6: note: in expansion of macro ‘MPI_Bcast’ 693 | MPI_Bcast(grid, n, MPI_DOUBLE, 0, mpb_comm); | ^~~~~~~~~ material_grid.c:691:10: warning: unused variable ‘n’ [-Wunused-variable] 691 | int n = ((int) g->size.x) * ((int) g->size.y) * ((int) g->size.z); | ^ material_grid.c:690:14: warning: variable ‘grid’ set but not used [-Wunused-but-set-variable] 690 | double *grid; | ^~~~ material_grid.c: In function ‘match_eps_func’: material_grid.c:816:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ material_grid.c:816:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:816:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:816:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ material_grid.c: At top level: material_grid.c:807:15: warning: ‘match_eps_func’ defined but not used [-Wunused-function] 807 | static double match_eps_func(int n, const double *u, double *grad, void *data) | ^~~~~~~~~~~~~~ epsilon.c: In function ‘mean_epsilon_func’: epsilon.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ epsilon.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ mv -f .deps/mpb-field-smob.Tpo .deps/mpb-field-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-material_grid_opt.o -MD -MP -MF .deps/mpb-material_grid_opt.Tpo -c -o mpb-material_grid_opt.o `test -f 'material_grid_opt.c' || echo './'`material_grid_opt.c material_grid_opt.c: In function ‘material_grids_min_tetm_gap’: material_grid_opt.c:90:43: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 90 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:91:44: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:91:60: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ material_grid_opt.c: In function ‘material_grids_maxmin_gap’: material_grid_opt.c:258:48: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 258 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:259:49: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:259:65: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ mv -f .deps/mpb-material_grid_opt.Tpo .deps/mpb-material_grid_opt.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-matrix-smob.o -MD -MP -MF .deps/mpb-matrix-smob.Tpo -c -o mpb-matrix-smob.o `test -f 'matrix-smob.c' || echo './'`matrix-smob.c mv -f .deps/mpb-medium.Tpo .deps/mpb-medium.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-mpb.o -MD -MP -MF .deps/mpb-mpb.Tpo -c -o mpb-mpb.o `test -f 'mpb.c' || echo './'`mpb.c In file included from mpb.c:35: mpb.c: In function ‘ctl_start_hook’: ../src/util/mpiglue.h:42:29: warning: statement with no effect [-Wunused-value] 42 | #define MPI_Init(argc,argv) 0 | ^ mpb.c:99:6: note: in expansion of macro ‘MPI_Init’ 99 | MPI_Init(argc, argv); | ^~~~~~~~ mpb.c:97:26: warning: unused parameter ‘argc’ [-Wunused-parameter] 97 | void ctl_start_hook(int *argc, char ***argv) | ~~~~~^~~~ mpb.c:97:40: warning: unused parameter ‘argv’ [-Wunused-parameter] 97 | void ctl_start_hook(int *argc, char ***argv) | ~~~~~~~~^~~~ mpb.c: In function ‘ctl_stop_hook’: ../src/util/mpiglue.h:43:24: warning: statement with no effect [-Wunused-value] 43 | #define MPI_Finalize() 0 | ^ mpb.c:143:6: note: in expansion of macro ‘MPI_Finalize’ 143 | MPI_Finalize(); | ^~~~~~~~~~~~ mv -f .deps/mpb-fields.Tpo .deps/mpb-fields.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-main.o -MD -MP -MF .deps/mpb-main.Tpo -c -o mpb-main.o `test -f 'main.c' || echo './'`main.c In file included from ctl-io.h:7, from main.c:37: main.c: In function ‘main_entry’: main.c:194:31: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 194 | gh_new_procedure("subplex", (SCM(*)(void))subplex_scm, 7, 0, 0); | ^ main.c:202:44: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 202 | gh_new_procedure("adaptive-integration", (SCM(*)(void))adaptive_integration_scm, 6, 0, 0); | ^ main.c:205:45: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^ mv -f .deps/mpb-material_grid.Tpo .deps/mpb-material_grid.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-geom.o -MD -MP -MF .deps/mpb-geom.Tpo -c -o mpb-geom.o `test -f 'geom.c' || echo './'`geom.c mv -f .deps/mpb-main.Tpo .deps/mpb-main.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb-ctl-io.o -MD -MP -MF .deps/mpb-ctl-io.Tpo -c -o mpb-ctl-io.o `test -f 'ctl-io.c' || echo './'`ctl-io.c mv -f .deps/mpb-matrix-smob.Tpo .deps/mpb-matrix-smob.Po sed "s%\./mpb%"/usr/bin/"mpb%g" \ mpb-split-preinstall > mpb-split chmod u+x mpb-split geom.c: In function ‘overlap_integrand’: geom.c:1156:10: warning: unused variable ‘s’ [-Wunused-variable] 1156 | double s[2]; | ^ ctl-io.c: In function ‘block_equal’: ctl-io.c:639:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 639 | else ; | ^ ctl-io.c: In function ‘cylinder_equal’: ctl-io.c:679:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 679 | else ; | ^ ctl-io.c: In function ‘geometric_object_equal’: ctl-io.c:716:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 716 | else ; | ^ ctl-io.c: In function ‘material_type_equal’: ctl-io.c:776:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 776 | else ; | ^ ctl-io.c: In function ‘lattice_destroy’: ctl-io.c:782:30: warning: unused parameter ‘o’ [-Wunused-parameter] 782 | void lattice_destroy(lattice o) | ~~~~~~~~^ ctl-io.c: In function ‘ellipsoid_destroy’: ctl-io.c:786:34: warning: unused parameter ‘o’ [-Wunused-parameter] 786 | void ellipsoid_destroy(ellipsoid o) | ~~~~~~~~~~^ ctl-io.c: In function ‘sphere_destroy’: ctl-io.c:845:28: warning: unused parameter ‘o’ [-Wunused-parameter] 845 | void sphere_destroy(sphere o) | ~~~~~~~^ ctl-io.c: In function ‘wedge_destroy’: ctl-io.c:849:26: warning: unused parameter ‘o’ [-Wunused-parameter] 849 | void wedge_destroy(wedge o) | ~~~~~~^ ctl-io.c: In function ‘cone_destroy’: ctl-io.c:853:24: warning: unused parameter ‘o’ [-Wunused-parameter] 853 | void cone_destroy(cone o) | ~~~~~^ ctl-io.c: In function ‘material_grid_destroy’: ctl-io.c:907:42: warning: unused parameter ‘o’ [-Wunused-parameter] 907 | void material_grid_destroy(material_grid o) | ~~~~~~~~~~~~~~^ ctl-io.c: In function ‘material_function_destroy’: ctl-io.c:911:50: warning: unused parameter ‘o’ [-Wunused-parameter] 911 | void material_function_destroy(material_function o) | ~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_anisotropic_destroy’: ctl-io.c:915:52: warning: unused parameter ‘o’ [-Wunused-parameter] 915 | void medium_anisotropic_destroy(medium_anisotropic o) | ~~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_destroy’: ctl-io.c:919:28: warning: unused parameter ‘o’ [-Wunused-parameter] 919 | void medium_destroy(medium o) | ~~~~~~~^ geom.c: In function ‘point_in_or_on_prism’: geom.c:2110:10: warning: unused variable ‘height’ [-Wunused-variable] 2110 | double height = prsm->height; | ^~~~~~ geom.c: In function ‘dcmp’: geom.c:2137:17: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c:2137:40: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c: In function ‘normal_to_prism’: geom.c:2357:11: warning: unused variable ‘axisp’ [-Wunused-variable] 2357 | vector3 axisp = vector3_scale(height, zhatp); | ^~~~~ geom.c: In function ‘triangle_normal’: geom.c:2548:10: warning: unused variable ‘nvnorm’ [-Wunused-variable] 2548 | double nvnorm = vector3_norm(nv); | ^~~~~~ mv -f .deps/mpb-mpb.Tpo .deps/mpb-mpb.Po mv -f .deps/mpb-ctl-io.Tpo .deps/mpb-ctl-io.Po mv -f .deps/mpb-geom.Tpo .deps/mpb-geom.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpb mpb-medium.o mpb-epsilon_file.o mpb-field-smob.o mpb-fields.o mpb-material_grid.o mpb-material_grid_opt.o mpb-matrix-smob.o mpb-mpb.o mpb-main.o mpb-geom.o mpb-ctl-io.o ../src/matrixio/libmatrixio.a ../src/libmpb.la -lctl -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpb mpb-medium.o mpb-epsilon_file.o mpb-field-smob.o mpb-fields.o mpb-material_grid.o mpb-material_grid_opt.o mpb-matrix-smob.o mpb-mpb.o mpb-main.o mpb-geom.o mpb-ctl-io.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lctl -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath epsilon.c: In function 'mean_epsilon_func': epsilon.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ epsilon.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ mu.c: In function 'mean_mu_func': mu.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ mu.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' Making all in examples make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/examples' Making all in utils make[4]: Entering directory '/<>/utils' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/matrixio -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_data-mpb-data.o -MD -MP -MF .deps/mpb_data-mpb-data.Tpo -c -o mpb_data-mpb-data.o `test -f 'mpb-data.c' || echo './'`mpb-data.c mpb-data.c: In function ‘handle_file’: mpb-data.c:703:29: warning: ‘%s’ directive writing up to 389 bytes into a region of size 300 [-Wformat-overflow=] 703 | sprintf(name_re, "%s.r", dname); | ^~ In file included from /usr/include/stdio.h:906, from mpb-data.c:19: In function ‘sprintf’, inlined from ‘handle_file’ at mpb-data.c:703:4: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 3 and 392 bytes into a destination of size 300 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mpb-data.c: In function ‘handle_file’: mpb-data.c:704:29: warning: ‘%s’ directive writing up to 389 bytes into a region of size 300 [-Wformat-overflow=] 704 | sprintf(name_im, "%s.i", dname); | ^~ In function ‘sprintf’, inlined from ‘handle_file’ at mpb-data.c:704:4: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 3 and 392 bytes into a destination of size 300 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mv -f .deps/mpb_data-mpb-data.Tpo .deps/mpb_data-mpb-data.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpb-data mpb_data-mpb-data.o ../src/matrixio/libmatrixio.a ../src/libmpb.la -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpb-data mpb_data-mpb-data.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpb.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/<>/utils' make[4]: Entering directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make install prefix=/<>/debian/build-tmp/mpb/usr make[2]: Entering directory '/<>' Making install in src make[3]: Entering directory '/<>/src' make install-recursive make[4]: Entering directory '/<>/src' Making install in util make[5]: Entering directory '/<>/src/util' make install-am make[6]: Entering directory '/<>/src/util' make[7]: Entering directory '/<>/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' make[5]: Leaving directory '/<>/src/util' Making install in matrices make[5]: Entering directory '/<>/src/matrices' make[6]: Entering directory '/<>/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrices' make[5]: Leaving directory '/<>/src/matrices' Making install in matrixio make[5]: Entering directory '/<>/src/matrixio' make[6]: Entering directory '/<>/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrixio' make[5]: Leaving directory '/<>/src/matrixio' Making install in maxwell make[5]: Entering directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/maxwell' make[5]: Leaving directory '/<>/src/maxwell' make[5]: Entering directory '/<>/src' make[6]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpb.la '/<>/debian/build-tmp/mpb/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpb.lai /<>/debian/build-tmp/mpb/usr/lib/libmpb.la libtool: install: /usr/bin/install -c .libs/libmpb.a /<>/debian/build-tmp/mpb/usr/lib/libmpb.a libtool: install: chmod 644 /<>/debian/build-tmp/mpb/usr/lib/libmpb.a libtool: install: ranlib /<>/debian/build-tmp/mpb/usr/lib/libmpb.a libtool: warning: remember to run 'libtool --finish /usr/lib' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/include' /usr/bin/install -c -m 644 mpb.h '/<>/debian/build-tmp/mpb/usr/include' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h util/verbosity.h '/<>/debian/build-tmp/mpb/usr/include/mpb' make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making install in tests make[3]: Entering directory '/<>/tests' make[4]: Entering directory '/<>/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/tests' make[3]: Leaving directory '/<>/tests' Making install in mpb make[3]: Entering directory '/<>/mpb' make install-am make[4]: Entering directory '/<>/mpb' make[5]: Entering directory '/<>/mpb' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpb '/<>/debian/build-tmp/mpb/usr/bin' libtool: install: /usr/bin/install -c mpb /<>/debian/build-tmp/mpb/usr/bin/mpb /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/bin' /usr/bin/install -c mpb-split '/<>/debian/build-tmp/mpb/usr/bin' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/<>/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/<>/debian/build-tmp/mpb/usr/share/mpb' make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' make[3]: Leaving directory '/<>/mpb' Making install in examples make[3]: Entering directory '/<>/examples' make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/examples' make[3]: Leaving directory '/<>/examples' Making install in utils make[3]: Entering directory '/<>/utils' make[4]: Entering directory '/<>/utils' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpb-data '/<>/debian/build-tmp/mpb/usr/bin' libtool: install: /usr/bin/install -c mpb-data /<>/debian/build-tmp/mpb/usr/bin/mpb-data /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/<>/debian/build-tmp/mpb/usr/share/man/man1' make[4]: Leaving directory '/<>/utils' make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make clean make[2]: Entering directory '/<>' Making clean in src make[3]: Entering directory '/<>/src' Making clean in util make[4]: Entering directory '/<>/src/util' rm -rf .libs _libs test -z "libutil.la" || rm -f libutil.la rm -f ./so_locations rm -f sphere_quad rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/util' Making clean in matrices make[4]: Entering directory '/<>/src/matrices' rm -rf .libs _libs test -z "libmatrices.la" || rm -f libmatrices.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/matrices' Making clean in matrixio make[4]: Entering directory '/<>/src/matrixio' rm -rf .libs _libs test -z "libmatrixio.a" || rm -f libmatrixio.a rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/matrixio' Making clean in maxwell make[4]: Entering directory '/<>/src/maxwell' rm -rf .libs _libs test -z "libmaxwell.la" || rm -f libmaxwell.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/maxwell' make[4]: Entering directory '/<>/src' test -z "libmpb.la" || rm -f libmpb.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making clean in tests make[3]: Entering directory '/<>/tests' rm -rf .libs _libs rm -f blastest.out maxwell_test.out maxwell_test_2.out rm -f malloctest blastest eigs_test maxwell_test normal_vectors rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/tests' Making clean in mpb make[3]: Entering directory '/<>/mpb' rm -f mpb rm -rf .libs _libs rm -f ctl-io.* main.* geom.* rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/mpb' Making clean in examples make[3]: Entering directory '/<>/examples' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/<>/examples' Making clean in utils make[3]: Entering directory '/<>/utils' rm -f mpb-data rm -rf .libs _libs rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' echo "Step1: normal version end" Step1: normal version end # version with inverse symmetry #XXX dh_auto_configure -- --with-inv-symmetry --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode F77=gfortran CC=mpicc SH_JOB=/bin/bash ./configure --with-inv-symmetry --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode configure: loading cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... (cached) /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... (cached) /usr/bin/mkdir -p checking for gawk... (cached) mawk checking whether make sets $(MAKE)... (cached) yes checking whether make supports nested variables... (cached) yes checking whether make supports nested variables... (cached) yes checking build system type... (cached) x86_64-pc-linux-gnu checking host system type... (cached) x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... (cached) o checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/grep -E checking for fgrep... (cached) /usr/bin/grep -F checking for ld used by mpicc... (cached) /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... (cached) yes checking for BSD- or MS-compatible name lister (nm)... (cached) /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... (cached) func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... (cached) func_convert_file_noop checking for /usr/bin/ld option to reload object files... (cached) -r checking for file... (cached) file checking for objdump... (cached) objdump checking how to recognize dependent libraries... (cached) pass_all checking for dlltool... no checking how to associate runtime and link libraries... (cached) printf %s\n checking for ar... (cached) ar checking for archiver @FILE support... (cached) @ checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from mpicc object... (cached) ok checking for sysroot... no checking for a working dd... (cached) /usr/bin/dd checking how to truncate binary pipes... (cached) /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... (cached) no checking for stdio.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for strings.h... (cached) yes checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... (cached) .libs checking if mpicc supports -fno-rtti -fno-exceptions... (cached) no checking for mpicc option to produce PIC... (cached) -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... (cached) yes checking if mpicc static flag -static works... (cached) no checking if mpicc supports -c -o file.o... (cached) yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether the compiler supports GNU Fortran 77... (cached) yes checking whether gfortran accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... (cached) -fPIC checking if gfortran PIC flag -fPIC works... (cached) yes checking if gfortran static flag -static works... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... (cached) /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... (cached) mpicc checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 *********************** INVERSION SYM. *********************** checking for sqrt in -lm... (cached) yes checking how to get verbose linking output from gfortran... (cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... (cached) none checking for Fortran 77 name-mangling scheme... (cached) lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... (cached) yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... (cached) no checking for ATL_xerbla in -latlas... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for dgemm_ in -ldgemm... (cached) no checking for sgemm_ in -lmkl... (cached) no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... (cached) no checking for sgemm_ in -ldxml... (cached) no checking for sgemm_ in -lscs... (cached) no checking for sgemm_ in -lcomplib.sgimath... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... (cached) no checking for cheev_ in -llapack... (cached) yes checking for deflate in -lz... (cached) yes checking for H5Pcreate in -lhdf5... (cached) yes checking for hdf5.h... (cached) yes checking for guile... (cached) yes checking for guile-config... (cached) guile-config checking if linking to guile works... yes checking for libguile.h... (cached) yes checking for guile/gh.h... (cached) no checking for scm_make_smob_type... (cached) yes checking for scm_array_get_handle... (cached) yes checking for scm_is_array... (cached) yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... (cached) gen-ctl-io checking for ctl_get_vector3 in -lctl... (cached) yes checking for ctl.h... (cached) yes checking whether libctl version is at least 4.0.0... checking how to run the C preprocessor... (cached) mpicc -E ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... (cached) yes checking for ctlgeom.h... (cached) yes checking for nlopt.h... (cached) no checking for nlopt_minimize in -lnlopt... (cached) no checking for egrep... (cached) /usr/bin/grep -E checking for unistd.h... (cached) yes checking for getopt.h... (cached) yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... (cached) yes checking for inline... (cached) inline checking for getopt... (cached) yes checking for strncmp... (cached) yes checking whether calling BLAS zdotc works... yes checking for bash... (cached) /bin/bash checking for feenableexcept... (cached) yes checking whether feenableexcept declaration is usable... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: executing depfiles commands config.status: executing libtool commands echo "Step2: inverse version start" Step2: inverse version start dh_auto_build make -j4 make[2]: Entering directory '/<>' make all-recursive make[3]: Entering directory '/<>' Making all in src make[4]: Entering directory '/<>/src' cp -f mpbconf.h mpbi.h make all-recursive make[5]: Entering directory '/<>/src' Making all in util make[6]: Entering directory '/<>/src/util' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT sphere-quad.o -MD -MP -MF .deps/sphere-quad.Tpo -c -o sphere-quad.o sphere-quad.c mv -f .deps/sphere-quad.Tpo .deps/sphere-quad.Po /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -llapack -lblas -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../../src/util/sphere_quad) > sphere-quad.h make all-am make[7]: Entering directory '/<>/src/util' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c -o debug_malloc.lo debug_malloc.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c -o mpi_utils.lo mpi_utils.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c -o verbosity.lo verbosity.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c debug_malloc.c -o debug_malloc.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c verbosity.c -o verbosity.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c mpi_utils.c -o mpi_utils.o mv -f .deps/verbosity.Tpo .deps/verbosity.Plo mpi_utils.c: In function ‘mpi_begin_critical_section’: mpi_utils.c:202:22: warning: unused variable ‘status’ [-Wunused-variable] 202 | MPI_Status status; | ^~~~~~ mpi_utils.c: In function ‘mpi_end_critical_section’: mpi_utils.c:210:35: warning: unused parameter ‘tag’ [-Wunused-parameter] 210 | void mpi_end_critical_section(int tag) | ~~~~^~~ mpi_utils.c: In function ‘mpi_one_printf’: mpi_utils.c:139:10: warning: ignoring return value of ‘vasprintf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 139 | vasprintf(&s, template, ap); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mv -f .deps/debug_malloc.Tpo .deps/debug_malloc.Plo mv -f .deps/mpi_utils.Tpo .deps/mpi_utils.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libutil.la debug_malloc.lo mpi_utils.lo verbosity.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libutil.a debug_malloc.o mpi_utils.o verbosity.o libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' Making all in matrices make[6]: Entering directory '/<>/src/matrices' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c -o libmatrices_la-blasglue.lo `test -f 'blasglue.c' || echo './'`blasglue.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c -o libmatrices_la-eigensolver.lo `test -f 'eigensolver.c' || echo './'`eigensolver.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c -o libmatrices_la-eigensolver_davidson.lo `test -f 'eigensolver_davidson.c' || echo './'`eigensolver_davidson.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT 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-flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c eigensolver_utils.c -o libmatrices_la-eigensolver_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c blasglue.c -o libmatrices_la-blasglue.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c eigensolver.c -o libmatrices_la-eigensolver.o mv -f .deps/libmatrices_la-eigensolver_utils.Tpo .deps/libmatrices_la-eigensolver_utils.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT 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.deps/libmatrices_la-eigensolver_davidson.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c -o libmatrices_la-matrices.lo `test -f 'matrices.c' || echo './'`matrices.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-matrices.lo -MD -MP -MF .deps/libmatrices_la-matrices.Tpo -c matrices.c -o libmatrices_la-matrices.o mv -f .deps/libmatrices_la-linmin.Tpo .deps/libmatrices_la-linmin.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c -o libmatrices_la-minpack2-linmin.lo `test -f 'minpack2-linmin.c' || echo './'`minpack2-linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c minpack2-linmin.c -o libmatrices_la-minpack2-linmin.o mv -f .deps/libmatrices_la-evectmatrix.Tpo .deps/libmatrices_la-evectmatrix.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c -o libmatrices_la-sqmatrix.lo `test -f 'sqmatrix.c' || echo './'`sqmatrix.c mv -f .deps/libmatrices_la-matrices.Tpo .deps/libmatrices_la-matrices.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c sqmatrix.c -o libmatrices_la-sqmatrix.o mv -f .deps/libmatrices_la-minpack2-linmin.Tpo .deps/libmatrices_la-minpack2-linmin.Plo mv -f .deps/libmatrices_la-sqmatrix.Tpo .deps/libmatrices_la-sqmatrix.Plo mv -f .deps/libmatrices_la-eigensolver.Tpo .deps/libmatrices_la-eigensolver.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmatrices.la libmatrices_la-blasglue.lo libmatrices_la-eigensolver.lo libmatrices_la-eigensolver_davidson.lo libmatrices_la-eigensolver_utils.lo libmatrices_la-evectmatrix.lo libmatrices_la-linmin.lo libmatrices_la-matrices.lo libmatrices_la-minpack2-linmin.lo libmatrices_la-sqmatrix.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmatrices.a libmatrices_la-blasglue.o libmatrices_la-eigensolver.o libmatrices_la-eigensolver_davidson.o libmatrices_la-eigensolver_utils.o libmatrices_la-evectmatrix.o libmatrices_la-linmin.o libmatrices_la-matrices.o libmatrices_la-minpack2-linmin.o libmatrices_la-sqmatrix.o libtool: link: ranlib .libs/libmatrices.a libtool: link: ( cd ".libs" && rm -f "libmatrices.la" && ln -s "../libmatrices.la" "libmatrices.la" ) make[6]: Leaving directory '/<>/src/matrices' Making all in matrixio make[6]: Entering directory '/<>/src/matrixio' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-evectmatrixio.o -MD -MP -MF .deps/libmatrixio_a-evectmatrixio.Tpo -c -o libmatrixio_a-evectmatrixio.o `test -f 'evectmatrixio.c' || echo './'`evectmatrixio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-fieldio.o -MD -MP -MF .deps/libmatrixio_a-fieldio.Tpo -c -o libmatrixio_a-fieldio.o `test -f 'fieldio.c' || echo './'`fieldio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-matrixio.o -MD -MP -MF .deps/libmatrixio_a-matrixio.Tpo -c -o libmatrixio_a-matrixio.o `test -f 'matrixio.c' || echo './'`matrixio.c matrixio.c: In function ‘matrixio_create_sub’: matrixio.c:469:24: warning: statement with no effect [-Wunused-value] 469 | IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); | ^ matrixio.c:58:32: note: in definition of macro ‘IF_EXCLUSIVE’ 58 | # define IF_EXCLUSIVE(yes,no) yes | ^~~ matrixio.c:472:24: warning: statement with no effect [-Wunused-value] 472 | IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); | ^ matrixio.c:58:32: note: in definition of macro ‘IF_EXCLUSIVE’ 58 | # define IF_EXCLUSIVE(yes,no) yes | ^~~ In file included from matrixio.c:29: matrixio.c: In function ‘matrixio_open_dataset’: matrixio.c:516:30: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 516 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ matrixio.c: In function ‘matrixio_create_dataset’: matrixio.c:552:24: warning: statement with no effect [-Wunused-value] 552 | IF_EXCLUSIVE(0,if (id.parallel) MPI_Barrier(mpb_comm)); | ^ matrixio.c:58:32: note: in definition of macro ‘IF_EXCLUSIVE’ 58 | # define IF_EXCLUSIVE(yes,no) yes | ^~~ matrixio.c: In function ‘matrixio_read_real_data’: matrixio.c:837:35: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 837 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fieldio.c:41:46: warning: argument 8 of type ‘const real *’ {aka ‘const double *’} declared as a pointer [-Warray-parameter=] 41 | const real *kvector, | ~~~~~~~~~~~~^~~~~~~ In file included from fieldio.c:28: matrixio.h:95:52: note: previously declared as an array ‘const real[3]’ {aka ‘const double[3]’} 95 | const real kvector[3], | ~~~~~~~~~~~^~~~~~~~~~ mv -f .deps/libmatrixio_a-evectmatrixio.Tpo .deps/libmatrixio_a-evectmatrixio.Po mv -f .deps/libmatrixio_a-fieldio.Tpo .deps/libmatrixio_a-fieldio.Po mv -f .deps/libmatrixio_a-matrixio.Tpo .deps/libmatrixio_a-matrixio.Po rm -f libmatrixio.a ar cru libmatrixio.a libmatrixio_a-evectmatrixio.o libmatrixio_a-fieldio.o libmatrixio_a-matrixio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmatrixio.a make[6]: Leaving directory '/<>/src/matrixio' Making all in maxwell make[6]: Entering directory '/<>/src/maxwell' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c -o libmaxwell_la-maxwell.lo `test -f 'maxwell.c' || echo './'`maxwell.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c -o libmaxwell_la-maxwell_constraints.lo `test -f 'maxwell_constraints.c' || echo './'`maxwell_constraints.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c -o libmaxwell_la-maxwell_eps.lo `test -f 'maxwell_eps.c' || echo './'`maxwell_eps.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c -o libmaxwell_la-maxwell_op.lo `test -f 'maxwell_op.c' || echo './'`maxwell_op.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c maxwell.c -o libmaxwell_la-maxwell.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c maxwell_op.c -o libmaxwell_la-maxwell_op.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c maxwell_constraints.c -o libmaxwell_la-maxwell_constraints.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c maxwell_eps.c -o libmaxwell_la-maxwell_eps.o maxwell_op.c: In function ‘project_c2t’: maxwell_op.c:51:54: warning: unused variable ‘az_i’ [-Wunused-variable] 51 | real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); | ^~~~ maxwell_op.c:51:32: warning: unused variable ‘ay_i’ [-Wunused-variable] 51 | real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); | ^~~~ maxwell_op.c:51:10: warning: unused variable ‘ax_i’ [-Wunused-variable] 51 | real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); | ^~~~ maxwell_op.c: In function ‘maxwell_compute_fft’: maxwell_op.c:187:21: warning: variable ‘np’ set but not used [-Wunused-but-set-variable] 187 | ptrdiff_t np[3]; | ^~ In file included from maxwell_eps.c:29: maxwell_eps.c: In function ‘set_maxwell_dielectric’: xyz_loop.h:39:15: warning: unused variable ‘n1’ [-Wunused-variable] 39 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1_, i2_, i1, i2, i3; \ | ^~ maxwell_eps.c:421:6: note: in expansion of macro ‘LOOP_XYZ’ 421 | LOOP_XYZ(md) { | ^~~~~~~~ maxwell_eps.c:404:27: warning: unused variable ‘rank’ [-Wunused-variable] 404 | int n_other, n_last, rank; | ^~~~ maxwell_eps.c:404:19: warning: unused variable ‘n_last’ [-Wunused-variable] 404 | int n_other, n_last, rank; | ^~~~~~ maxwell_eps.c:404:10: warning: unused variable ‘n_other’ [-Wunused-variable] 404 | int n_other, n_last, rank; | ^~~~~~~ maxwell_eps.c:395:16: warning: unused variable ‘k’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:13: warning: unused variable ‘j’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:10: warning: unused variable ‘i’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c: At top level: maxwell_eps.c:181:12: warning: ‘sym_matrix_eq’ defined but not used [-Wunused-function] 181 | static int sym_matrix_eq(symmetric_matrix V1, symmetric_matrix V2, double tol) | ^~~~~~~~~~~~~ mv -f .deps/libmaxwell_la-maxwell.Tpo .deps/libmaxwell_la-maxwell.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c -o libmaxwell_la-maxwell_pre.lo `test -f 'maxwell_pre.c' || echo './'`maxwell_pre.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c maxwell_pre.c -o libmaxwell_la-maxwell_pre.o mv -f .deps/libmaxwell_la-maxwell_eps.Tpo .deps/libmaxwell_la-maxwell_eps.Plo mv -f .deps/libmaxwell_la-maxwell_constraints.Tpo .deps/libmaxwell_la-maxwell_constraints.Plo mv -f .deps/libmaxwell_la-maxwell_pre.Tpo .deps/libmaxwell_la-maxwell_pre.Plo mv -f .deps/libmaxwell_la-maxwell_op.Tpo .deps/libmaxwell_la-maxwell_op.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmaxwell.la libmaxwell_la-maxwell.lo libmaxwell_la-maxwell_constraints.lo libmaxwell_la-maxwell_eps.lo libmaxwell_la-maxwell_op.lo libmaxwell_la-maxwell_pre.lo -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmaxwell.a libmaxwell_la-maxwell.o libmaxwell_la-maxwell_constraints.o libmaxwell_la-maxwell_eps.o libmaxwell_la-maxwell_op.o libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmaxwell.a libtool: link: ( cd ".libs" && rm -f "libmaxwell.la" && ln -s "../libmaxwell.la" "libmaxwell.la" ) make[6]: Leaving directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -no-undefined -version-info 5:1:4 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmpbi.la -rpath /usr/lib util/libutil.la matrices/libmatrices.la maxwell/libmaxwell.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: (cd .libs/libmpbi.lax/libutil.a && ar x "/<>/src/util/.libs/libutil.a") libtool: link: (cd .libs/libmpbi.lax/libmatrices.a && ar x "/<>/src/matrices/.libs/libmatrices.a") libtool: link: (cd .libs/libmpbi.lax/libmaxwell.a && ar x "/<>/src/maxwell/.libs/libmaxwell.a") libtool: link: ar cr .libs/libmpbi.a .libs/libmpbi.lax/libutil.a/debug_malloc.o .libs/libmpbi.lax/libutil.a/mpi_utils.o .libs/libmpbi.lax/libutil.a/verbosity.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-blasglue.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-eigensolver.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-eigensolver_davidson.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-eigensolver_utils.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-evectmatrix.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-linmin.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-matrices.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-minpack2-linmin.o .libs/libmpbi.lax/libmatrices.a/libmatrices_la-sqmatrix.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell_constraints.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell_eps.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell_op.o .libs/libmpbi.lax/libmaxwell.a/libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmpbi.a libtool: link: rm -fr .libs/libmpbi.lax libtool: link: ( cd ".libs" && rm -f "libmpbi.la" && ln -s "../libmpbi.la" "libmpbi.la" ) make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' Making all in tests make[4]: Entering directory '/<>/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT malloctest.o -MD -MP -MF .deps/malloctest.Tpo -c -o malloctest.o malloctest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT blastest.o -MD -MP -MF .deps/blastest.Tpo -c -o blastest.o blastest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT eigs_test.o -MD -MP -MF .deps/eigs_test.Tpo -c -o eigs_test.o eigs_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT maxwell_test.o -MD -MP -MF .deps/maxwell_test.Tpo -c -o maxwell_test.o maxwell_test.c eigs_test.c: In function ‘Aop’: eigs_test.c:293:51: warning: unused parameter ‘data’ [-Wunused-parameter] 293 | void Aop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:294:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:294:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Bop’: eigs_test.c:303:51: warning: unused parameter ‘data’ [-Wunused-parameter] 303 | void Bop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:304:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:304:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Ainvop’: eigs_test.c:313:54: warning: unused parameter ‘data’ [-Wunused-parameter] 313 | void Ainvop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:314:25: warning: unused parameter ‘Y’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:314:34: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c:314:54: warning: unused parameter ‘YtY’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~^~~ eigs_test.c: In function ‘Cop_old’: eigs_test.c:324:55: warning: unused parameter ‘data’ [-Wunused-parameter] 324 | void Cop_old(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:325:22: warning: unused parameter ‘Y’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:325:31: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c: In function ‘Cop’: eigs_test.c:349:51: warning: unused parameter ‘data’ [-Wunused-parameter] 349 | void Cop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:350:23: warning: unused parameter ‘Y’ [-Wunused-parameter] 350 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ mv -f .deps/malloctest.Tpo .deps/malloctest.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT normal_vectors-normal_vectors.o -MD -MP -MF .deps/normal_vectors-normal_vectors.Tpo -c -o normal_vectors-normal_vectors.o `test -f 'normal_vectors.c' || echo './'`normal_vectors.c mv -f .deps/blastest.Tpo .deps/blastest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/normal_vectors-normal_vectors.Tpo .deps/normal_vectors-normal_vectors.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/maxwell_test.Tpo .deps/maxwell_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/eigs_test.Tpo .deps/eigs_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/libmpbi.la -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/<>/tests' Making all in mpb make[4]: Entering directory '/<>/mpb' cp -f /usr/share/libctl/base/main.c main.c cp -f /usr/share/libctl/utils/geom.c geom.c gen-ctl-io --header -o ctl-io.h mpb.scm /usr/share/libctl gen-ctl-io --code -o ctl-io.c mpb.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" make all-am make[5]: Entering directory '/<>/mpb' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-medium.o -MD -MP -MF .deps/mpbi-medium.Tpo -c -o mpbi-medium.o `test -f 'medium.c' || echo './'`medium.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-epsilon_file.o -MD -MP -MF .deps/mpbi-epsilon_file.Tpo -c -o mpbi-epsilon_file.o `test -f 'epsilon_file.c' || echo './'`epsilon_file.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-field-smob.o -MD -MP -MF .deps/mpbi-field-smob.Tpo -c -o mpbi-field-smob.o `test -f 'field-smob.c' || echo './'`field-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-fields.o -MD -MP -MF .deps/mpbi-fields.Tpo -c -o mpbi-fields.o `test -f 'fields.c' || echo './'`fields.c field-smob.c: In function ‘integrate_fieldL’: field-smob.c:407:16: warning: unused variable ‘k’ [-Wunused-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ In file included from medium.c:75: epsilon.c: In function ‘get_epsilon’: epsilon.c:434:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ epsilon.c:434:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ epsilon.c:434:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ In file included from medium.c:76: mu.c: In function ‘get_mu’: mu.c:434:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ mu.c:434:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ mu.c:434:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c: In function ‘compute_field_energy_internal’: fields.c:229:50: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ fields.c:229:46: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:229:42: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c: In function ‘fix_field_phase’: fields.c:446:13: warning: unused variable ‘theta’ [-Wunused-variable] 446 | double theta; | ^~~~~ fields.c:444:31: warning: unused variable ‘sq_sum’ [-Wunused-variable] 444 | real sq_sum2[2] = {0,0}, sq_sum[2], maxabs = 0.0; | ^~~~~~ fields.c:444:11: warning: unused variable ‘sq_sum2’ [-Wunused-variable] 444 | real sq_sum2[2] = {0,0}, sq_sum[2], maxabs = 0.0; | ^~~~~~~ fields.c: In function ‘compute_energy_in_dielectric’: fields.c:873:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ fields.c:873:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:873:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c: In function ‘compute_energy_in_object_list’: fields.c:1322:6: warning: ‘geom_fix_objects0’ is deprecated [-Wdeprecated-declarations] 1322 | geom_fix_objects0(objects); | ^~~~~~~~~~~~~~~~~ In file included from fields.c:33: /usr/include/ctlgeom.h:65:13: note: declared here 65 | extern void geom_fix_objects0(GEOMETRIC_OBJECT_LIST geometry) CTLGEOM_DEPRECATED; | ^~~~~~~~~~~~~~~~~ In file included from fields.c:30: ../src/maxwell/xyz_loop.h:39:15: warning: unused variable ‘n1’ [-Wunused-variable] 39 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1_, i2_, i1, i2, i3; \ | ^~ fields.c:1337:6: note: in expansion of macro ‘LOOP_XYZ’ 1337 | LOOP_XYZ(mdata) { | ^~~~~~~~ fields.c:1309:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1309:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1309:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1309:16: warning: unused variable ‘k’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1309:10: warning: unused variable ‘i’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_field_integral’: fields.c:1377:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1377:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1377:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1377:16: warning: unused variable ‘k’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:10: warning: unused variable ‘i’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ mv -f .deps/mpbi-epsilon_file.Tpo .deps/mpbi-epsilon_file.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-material_grid.o -MD -MP -MF .deps/mpbi-material_grid.Tpo -c -o mpbi-material_grid.o `test -f 'material_grid.c' || echo './'`material_grid.c mu.c: In function ‘mean_mu_func’: mu.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ mu.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ material_grid.c: In function ‘material_grids_addgradient’: material_grid.c:390:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:390:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:390:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ material_grid.c:390:16: warning: unused variable ‘k’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: In function ‘print_material_grids_deps_du_numeric’: material_grid.c:634:14: warning: unused variable ‘foo’ [-Wunused-variable] 634 | double *foo; | ^~~ In file included from material_grid.c:25: material_grid.c: In function ‘synchronize_material_grid’: ../src/util/mpiglue.h:58:40: warning: statement with no effect [-Wunused-value] 58 | #define MPI_Bcast(b, n, t, root, comm) 0 | ^ material_grid.c:693:6: note: in expansion of macro ‘MPI_Bcast’ 693 | MPI_Bcast(grid, n, MPI_DOUBLE, 0, mpb_comm); | ^~~~~~~~~ material_grid.c:691:10: warning: unused variable ‘n’ [-Wunused-variable] 691 | int n = ((int) g->size.x) * ((int) g->size.y) * ((int) g->size.z); | ^ material_grid.c:690:14: warning: variable ‘grid’ set but not used [-Wunused-but-set-variable] 690 | double *grid; | ^~~~ material_grid.c: In function ‘match_eps_func’: material_grid.c:816:16: warning: unused variable ‘k’ [-Wunused-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: At top level: material_grid.c:807:15: warning: ‘match_eps_func’ defined but not used [-Wunused-function] 807 | static double match_eps_func(int n, const double *u, double *grad, void *data) | ^~~~~~~~~~~~~~ epsilon.c: In function ‘mean_epsilon_func’: epsilon.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ epsilon.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ mv -f .deps/mpbi-field-smob.Tpo .deps/mpbi-field-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-material_grid_opt.o -MD -MP -MF .deps/mpbi-material_grid_opt.Tpo -c -o mpbi-material_grid_opt.o `test -f 'material_grid_opt.c' || echo './'`material_grid_opt.c material_grid_opt.c: In function ‘material_grids_min_tetm_gap’: material_grid_opt.c:90:43: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 90 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:91:44: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:91:60: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ material_grid_opt.c: In function ‘material_grids_maxmin_gap’: material_grid_opt.c:258:48: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 258 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:259:49: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:259:65: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ material_grid.c: In function ‘material_grids_addgradient’: material_grid.c:390:13: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ mv -f .deps/mpbi-medium.Tpo .deps/mpbi-medium.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-matrix-smob.o -MD -MP -MF .deps/mpbi-matrix-smob.Tpo -c -o mpbi-matrix-smob.o `test -f 'matrix-smob.c' || echo './'`matrix-smob.c mv -f .deps/mpbi-material_grid_opt.Tpo .deps/mpbi-material_grid_opt.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-mpb.o -MD -MP -MF .deps/mpbi-mpb.Tpo -c -o mpbi-mpb.o `test -f 'mpb.c' || echo './'`mpb.c fields.c: In function ‘compute_energy_in_object_list’: fields.c:1309:13: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_field_integral’: fields.c:1377:13: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ In file included from mpb.c:35: mpb.c: In function ‘ctl_start_hook’: ../src/util/mpiglue.h:42:29: warning: statement with no effect [-Wunused-value] 42 | #define MPI_Init(argc,argv) 0 | ^ mpb.c:99:6: note: in expansion of macro ‘MPI_Init’ 99 | MPI_Init(argc, argv); | ^~~~~~~~ mpb.c:97:26: warning: unused parameter ‘argc’ [-Wunused-parameter] 97 | void ctl_start_hook(int *argc, char ***argv) | ~~~~~^~~~ mpb.c:97:40: warning: unused parameter ‘argv’ [-Wunused-parameter] 97 | void ctl_start_hook(int *argc, char ***argv) | ~~~~~~~~^~~~ mpb.c: In function ‘ctl_stop_hook’: ../src/util/mpiglue.h:43:24: warning: statement with no effect [-Wunused-value] 43 | #define MPI_Finalize() 0 | ^ mpb.c:143:6: note: in expansion of macro ‘MPI_Finalize’ 143 | MPI_Finalize(); | ^~~~~~~~~~~~ mv -f .deps/mpbi-fields.Tpo .deps/mpbi-fields.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-main.o -MD -MP -MF .deps/mpbi-main.Tpo -c -o mpbi-main.o `test -f 'main.c' || echo './'`main.c In file included from ctl-io.h:7, from main.c:37: main.c: In function ‘main_entry’: main.c:194:31: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 194 | gh_new_procedure("subplex", (SCM(*)(void))subplex_scm, 7, 0, 0); | ^ main.c:202:44: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 202 | gh_new_procedure("adaptive-integration", (SCM(*)(void))adaptive_integration_scm, 6, 0, 0); | ^ main.c:205:45: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^ mv -f .deps/mpbi-material_grid.Tpo .deps/mpbi-material_grid.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-geom.o -MD -MP -MF .deps/mpbi-geom.Tpo -c -o mpbi-geom.o `test -f 'geom.c' || echo './'`geom.c mv -f .deps/mpbi-matrix-smob.Tpo .deps/mpbi-matrix-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi-ctl-io.o -MD -MP -MF .deps/mpbi-ctl-io.Tpo -c -o mpbi-ctl-io.o `test -f 'ctl-io.c' || echo './'`ctl-io.c mv -f .deps/mpbi-main.Tpo .deps/mpbi-main.Po sed "s%\./mpb%"/usr/bin/"mpbi%g" \ mpb-split-preinstall > mpbi-split chmod u+x mpbi-split geom.c: In function ‘overlap_integrand’: geom.c:1156:10: warning: unused variable ‘s’ [-Wunused-variable] 1156 | double s[2]; | ^ geom.c: In function ‘point_in_or_on_prism’: geom.c:2110:10: warning: unused variable ‘height’ [-Wunused-variable] 2110 | double height = prsm->height; | ^~~~~~ geom.c: In function ‘dcmp’: geom.c:2137:17: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c:2137:40: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c: In function ‘normal_to_prism’: geom.c:2357:11: warning: unused variable ‘axisp’ [-Wunused-variable] 2357 | vector3 axisp = vector3_scale(height, zhatp); | ^~~~~ geom.c: In function ‘triangle_normal’: geom.c:2548:10: warning: unused variable ‘nvnorm’ [-Wunused-variable] 2548 | double nvnorm = vector3_norm(nv); | ^~~~~~ ctl-io.c: In function ‘block_equal’: ctl-io.c:639:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 639 | else ; | ^ ctl-io.c: In function ‘cylinder_equal’: ctl-io.c:679:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 679 | else ; | ^ ctl-io.c: In function ‘geometric_object_equal’: ctl-io.c:716:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 716 | else ; | ^ ctl-io.c: In function ‘material_type_equal’: ctl-io.c:776:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 776 | else ; | ^ ctl-io.c: In function ‘lattice_destroy’: ctl-io.c:782:30: warning: unused parameter ‘o’ [-Wunused-parameter] 782 | void lattice_destroy(lattice o) | ~~~~~~~~^ ctl-io.c: In function ‘ellipsoid_destroy’: ctl-io.c:786:34: warning: unused parameter ‘o’ [-Wunused-parameter] 786 | void ellipsoid_destroy(ellipsoid o) | ~~~~~~~~~~^ ctl-io.c: In function ‘sphere_destroy’: ctl-io.c:845:28: warning: unused parameter ‘o’ [-Wunused-parameter] 845 | void sphere_destroy(sphere o) | ~~~~~~~^ ctl-io.c: In function ‘wedge_destroy’: ctl-io.c:849:26: warning: unused parameter ‘o’ [-Wunused-parameter] 849 | void wedge_destroy(wedge o) | ~~~~~~^ ctl-io.c: In function ‘cone_destroy’: ctl-io.c:853:24: warning: unused parameter ‘o’ [-Wunused-parameter] 853 | void cone_destroy(cone o) | ~~~~~^ ctl-io.c: In function ‘material_grid_destroy’: ctl-io.c:907:42: warning: unused parameter ‘o’ [-Wunused-parameter] 907 | void material_grid_destroy(material_grid o) | ~~~~~~~~~~~~~~^ ctl-io.c: In function ‘material_function_destroy’: ctl-io.c:911:50: warning: unused parameter ‘o’ [-Wunused-parameter] 911 | void material_function_destroy(material_function o) | ~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_anisotropic_destroy’: ctl-io.c:915:52: warning: unused parameter ‘o’ [-Wunused-parameter] 915 | void medium_anisotropic_destroy(medium_anisotropic o) | ~~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_destroy’: ctl-io.c:919:28: warning: unused parameter ‘o’ [-Wunused-parameter] 919 | void medium_destroy(medium o) | ~~~~~~~^ mv -f .deps/mpbi-mpb.Tpo .deps/mpbi-mpb.Po mv -f .deps/mpbi-ctl-io.Tpo .deps/mpbi-ctl-io.Po mv -f .deps/mpbi-geom.Tpo .deps/mpbi-geom.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpbi mpbi-medium.o mpbi-epsilon_file.o mpbi-field-smob.o mpbi-fields.o mpbi-material_grid.o mpbi-material_grid_opt.o mpbi-matrix-smob.o mpbi-mpb.o mpbi-main.o mpbi-geom.o mpbi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/libmpbi.la -lctl -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpbi mpbi-medium.o mpbi-epsilon_file.o mpbi-field-smob.o mpbi-fields.o mpbi-material_grid.o mpbi-material_grid_opt.o mpbi-matrix-smob.o mpbi-mpb.o mpbi-main.o mpbi-geom.o mpbi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lctl -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath epsilon.c: In function 'mean_epsilon_func': epsilon.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ epsilon.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ mu.c: In function 'mean_mu_func': mu.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ mu.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ fields.c: In function 'compute_field_integral': fields.c:1377:13: warning: 'j' may be used uninitialized [-Wmaybe-uninitialized] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function 'compute_energy_in_object_list_aux': fields.c:1309:13: warning: 'j' may be used uninitialized [-Wmaybe-uninitialized] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: In function 'material_grids_addgradient': material_grid.c:390:13: warning: 'j' may be used uninitialized [-Wmaybe-uninitialized] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' Making all in examples make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/examples' Making all in utils make[4]: Entering directory '/<>/utils' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/matrixio -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_data-mpb-data.o -MD -MP -MF .deps/mpbi_data-mpb-data.Tpo -c -o mpbi_data-mpb-data.o `test -f 'mpb-data.c' || echo './'`mpb-data.c mpb-data.c: In function ‘handle_file’: mpb-data.c:703:29: warning: ‘%s’ directive writing up to 389 bytes into a region of size 300 [-Wformat-overflow=] 703 | sprintf(name_re, "%s.r", dname); | ^~ In file included from /usr/include/stdio.h:906, from mpb-data.c:19: In function ‘sprintf’, inlined from ‘handle_file’ at mpb-data.c:703:4: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 3 and 392 bytes into a destination of size 300 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mpb-data.c: In function ‘handle_file’: mpb-data.c:704:29: warning: ‘%s’ directive writing up to 389 bytes into a region of size 300 [-Wformat-overflow=] 704 | sprintf(name_im, "%s.i", dname); | ^~ In function ‘sprintf’, inlined from ‘handle_file’ at mpb-data.c:704:4: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 3 and 392 bytes into a destination of size 300 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mv -f .deps/mpbi_data-mpb-data.Tpo .deps/mpbi_data-mpb-data.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpbi-data mpbi_data-mpb-data.o ../src/matrixio/libmatrixio.a ../src/libmpbi.la -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpbi-data mpbi_data-mpb-data.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpbi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lctlgeom -lhdf5 -lz -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/<>/utils' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make install prefix=/<>/debian/build-tmp/mpb/usr make[2]: Entering directory '/<>' Making install in src make[3]: Entering directory '/<>/src' make install-recursive make[4]: Entering directory '/<>/src' Making install in util make[5]: Entering directory '/<>/src/util' make install-am make[6]: Entering directory '/<>/src/util' make[7]: Entering directory '/<>/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' make[5]: Leaving directory '/<>/src/util' Making install in matrices make[5]: Entering directory '/<>/src/matrices' make[6]: Entering directory '/<>/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrices' make[5]: Leaving directory '/<>/src/matrices' Making install in matrixio make[5]: Entering directory '/<>/src/matrixio' make[6]: Entering directory '/<>/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrixio' make[5]: Leaving directory '/<>/src/matrixio' Making install in maxwell make[5]: Entering directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/maxwell' make[5]: Leaving directory '/<>/src/maxwell' make[5]: Entering directory '/<>/src' make[6]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpbi.la '/<>/debian/build-tmp/mpb/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpbi.lai /<>/debian/build-tmp/mpb/usr/lib/libmpbi.la libtool: install: /usr/bin/install -c .libs/libmpbi.a /<>/debian/build-tmp/mpb/usr/lib/libmpbi.a libtool: install: chmod 644 /<>/debian/build-tmp/mpb/usr/lib/libmpbi.a libtool: install: ranlib /<>/debian/build-tmp/mpb/usr/lib/libmpbi.a libtool: warning: remember to run 'libtool --finish /usr/lib' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/include' /usr/bin/install -c -m 644 mpbi.h '/<>/debian/build-tmp/mpb/usr/include' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h util/verbosity.h '/<>/debian/build-tmp/mpb/usr/include/mpb' make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making install in tests make[3]: Entering directory '/<>/tests' make[4]: Entering directory '/<>/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/tests' make[3]: Leaving directory '/<>/tests' Making install in mpb make[3]: Entering directory '/<>/mpb' make install-am make[4]: Entering directory '/<>/mpb' make[5]: Entering directory '/<>/mpb' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpbi '/<>/debian/build-tmp/mpb/usr/bin' libtool: install: /usr/bin/install -c mpbi /<>/debian/build-tmp/mpb/usr/bin/mpbi /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/bin' /usr/bin/install -c mpbi-split '/<>/debian/build-tmp/mpb/usr/bin' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/<>/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/<>/debian/build-tmp/mpb/usr/share/mpb' make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' make[3]: Leaving directory '/<>/mpb' Making install in examples make[3]: Entering directory '/<>/examples' make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/examples' make[3]: Leaving directory '/<>/examples' Making install in utils make[3]: Entering directory '/<>/utils' make[4]: Entering directory '/<>/utils' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpbi-data '/<>/debian/build-tmp/mpb/usr/bin' libtool: install: /usr/bin/install -c mpbi-data /<>/debian/build-tmp/mpb/usr/bin/mpbi-data /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/<>/debian/build-tmp/mpb/usr/share/man/man1' make[4]: Leaving directory '/<>/utils' make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make clean make[2]: Entering directory '/<>' Making clean in src make[3]: Entering directory '/<>/src' Making clean in util make[4]: Entering directory '/<>/src/util' rm -rf .libs _libs test -z "libutil.la" || rm -f libutil.la rm -f ./so_locations rm -f sphere_quad rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/util' Making clean in matrices make[4]: Entering directory '/<>/src/matrices' rm -rf .libs _libs test -z "libmatrices.la" || rm -f libmatrices.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/matrices' Making clean in matrixio make[4]: Entering directory '/<>/src/matrixio' rm -rf .libs _libs test -z "libmatrixio.a" || rm -f libmatrixio.a rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/matrixio' Making clean in maxwell make[4]: Entering directory '/<>/src/maxwell' rm -rf .libs _libs test -z "libmaxwell.la" || rm -f libmaxwell.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/maxwell' make[4]: Entering directory '/<>/src' test -z "libmpbi.la" || rm -f libmpbi.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making clean in tests make[3]: Entering directory '/<>/tests' rm -rf .libs _libs rm -f blastest.out maxwell_test.out maxwell_test_2.out rm -f malloctest blastest eigs_test maxwell_test normal_vectors rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/tests' Making clean in mpb make[3]: Entering directory '/<>/mpb' rm -f mpbi rm -rf .libs _libs rm -f ctl-io.* main.* geom.* rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/mpb' Making clean in examples make[3]: Entering directory '/<>/examples' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/<>/examples' Making clean in utils make[3]: Entering directory '/<>/utils' rm -f mpbi-data rm -rf .libs _libs rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' echo "Step2: inverse version end" Step2: inverse version end # normal version with mpi echo "Step3: mpi version start" Step3: mpi version start #XXX dh_auto_configure -- --with-mpi --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode F77=gfortran CC=mpicc SH_JOB=/bin/bash ./configure --with-mpi --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode configure: loading cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... (cached) /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... (cached) /usr/bin/mkdir -p checking for gawk... (cached) mawk checking whether make sets $(MAKE)... (cached) yes checking whether make supports nested variables... (cached) yes checking whether make supports nested variables... (cached) yes checking build system type... (cached) x86_64-pc-linux-gnu checking host system type... (cached) x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... (cached) o checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/grep -E checking for fgrep... (cached) /usr/bin/grep -F checking for ld used by mpicc... (cached) /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... (cached) yes checking for BSD- or MS-compatible name lister (nm)... (cached) /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... (cached) func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... (cached) func_convert_file_noop checking for /usr/bin/ld option to reload object files... (cached) -r checking for file... (cached) file checking for objdump... (cached) objdump checking how to recognize dependent libraries... (cached) pass_all checking for dlltool... no checking how to associate runtime and link libraries... (cached) printf %s\n checking for ar... (cached) ar checking for archiver @FILE support... (cached) @ checking for strip... (cached) strip checking for ranlib... (cached) ranlib checking command to parse /usr/bin/nm -B output from mpicc object... (cached) ok checking for sysroot... no checking for a working dd... (cached) /usr/bin/dd checking how to truncate binary pipes... (cached) /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... (cached) no checking for stdio.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for strings.h... (cached) yes checking for sys/stat.h... (cached) yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... (cached) .libs checking if mpicc supports -fno-rtti -fno-exceptions... (cached) no checking for mpicc option to produce PIC... (cached) -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... (cached) yes checking if mpicc static flag -static works... (cached) no checking if mpicc supports -c -o file.o... (cached) yes checking if mpicc supports -c -o file.o... (cached) yes checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking whether the compiler supports GNU Fortran 77... (cached) yes checking whether gfortran accepts -g... (cached) yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for gfortran option to produce PIC... (cached) -fPIC checking if gfortran PIC flag -fPIC works... (cached) yes checking if gfortran static flag -static works... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... (cached) /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... (cached) mpicc checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 checking for sqrt in -lm... (cached) yes checking how to get verbose linking output from gfortran... (cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... (cached) none checking for Fortran 77 name-mangling scheme... (cached) lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... (cached) yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... (cached) no checking for ATL_xerbla in -latlas... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for dgemm_ in -ldgemm... (cached) no checking for sgemm_ in -lmkl... (cached) no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... (cached) no checking for sgemm_ in -ldxml... (cached) no checking for sgemm_ in -lscs... (cached) no checking for sgemm_ in -lcomplib.sgimath... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... (cached) no checking for cheev_ in -llapack... (cached) yes checking for mpicc... mpicc checking for MPI_Init... yes checking for mpi.h... yes checking for fftw_mpi_execute_dft in -lfftw3_mpi... yes checking for mpirun... mpirun checking for deflate in -lz... (cached) yes checking for H5Pcreate in -lhdf5... (cached) yes checking for hdf5.h... (cached) yes checking for H5Pset_mpi... no checking for H5Pset_fapl_mpio... yes checking for guile... (cached) yes checking for guile-config... (cached) guile-config checking if linking to guile works... yes checking for libguile.h... (cached) yes checking for guile/gh.h... (cached) no checking for scm_make_smob_type... (cached) yes checking for scm_array_get_handle... (cached) yes checking for scm_is_array... (cached) yes checking for SCM_SMOB_PREDICATE... yes checking for SCM_SMOB_DATA... yes checking for SCM_NEWSMOB... yes checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... (cached) gen-ctl-io checking for ctl_get_vector3 in -lctl... (cached) yes checking for ctl.h... (cached) yes checking whether libctl version is at least 4.0.0... checking how to run the C preprocessor... (cached) mpicc -E ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... (cached) yes checking for ctlgeom.h... (cached) yes checking for nlopt.h... (cached) no checking for nlopt_minimize in -lnlopt... (cached) no checking for egrep... (cached) /usr/bin/grep -E checking for unistd.h... (cached) yes checking for getopt.h... (cached) yes checking for nlopt.h... (cached) no checking for an ANSI C-conforming const... (cached) yes checking for inline... (cached) inline checking for getopt... (cached) yes checking for strncmp... (cached) yes checking whether calling BLAS zdotc works... yes checking for bash... (cached) /bin/bash checking for feenableexcept... (cached) yes checking whether feenableexcept declaration is usable... yes configure: updating cache ../config.cache checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build make -j4 make[2]: Entering directory '/<>' make all-recursive make[3]: Entering directory '/<>' Making all in src make[4]: Entering directory '/<>/src' cp -f mpbconf.h mpb_mpi.h make all-recursive make[5]: Entering directory '/<>/src' Making all in util make[6]: Entering directory '/<>/src/util' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT sphere-quad.o -MD -MP -MF .deps/sphere-quad.Tpo -c -o sphere-quad.o sphere-quad.c mv -f .deps/sphere-quad.Tpo .deps/sphere-quad.Po /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../../src/util/sphere_quad) > sphere-quad.h make all-am make[7]: Entering directory '/<>/src/util' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c -o debug_malloc.lo debug_malloc.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c -o mpi_utils.lo mpi_utils.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c -o verbosity.lo verbosity.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c mpi_utils.c -o mpi_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall 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debug_malloc.o mpi_utils.o verbosity.o libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' Making all in matrices make[6]: Entering directory '/<>/src/matrices' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c -o libmatrices_la-blasglue.lo `test -f 'blasglue.c' || echo './'`blasglue.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. 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-MF .deps/libmatrices_la-eigensolver.Tpo -c eigensolver.c -o libmatrices_la-eigensolver.o mv -f .deps/libmatrices_la-eigensolver_utils.Tpo .deps/libmatrices_la-eigensolver_utils.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c -o libmatrices_la-evectmatrix.lo `test -f 'evectmatrix.c' || echo './'`evectmatrix.c mv -f .deps/libmatrices_la-blasglue.Tpo .deps/libmatrices_la-blasglue.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time 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libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c evectmatrix.c -o libmatrices_la-evectmatrix.o mv -f .deps/libmatrices_la-eigensolver_davidson.Tpo .deps/libmatrices_la-eigensolver_davidson.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat 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-D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c -o libmatrices_la-minpack2-linmin.lo `test -f 'minpack2-linmin.c' || echo './'`minpack2-linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c minpack2-linmin.c -o libmatrices_la-minpack2-linmin.o mv -f .deps/libmatrices_la-evectmatrix.Tpo .deps/libmatrices_la-evectmatrix.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c -o libmatrices_la-sqmatrix.lo `test -f 'sqmatrix.c' || echo './'`sqmatrix.c mv -f .deps/libmatrices_la-matrices.Tpo .deps/libmatrices_la-matrices.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c sqmatrix.c -o libmatrices_la-sqmatrix.o mv -f .deps/libmatrices_la-minpack2-linmin.Tpo .deps/libmatrices_la-minpack2-linmin.Plo mv -f .deps/libmatrices_la-sqmatrix.Tpo .deps/libmatrices_la-sqmatrix.Plo mv -f .deps/libmatrices_la-eigensolver.Tpo .deps/libmatrices_la-eigensolver.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmatrices.la libmatrices_la-blasglue.lo libmatrices_la-eigensolver.lo libmatrices_la-eigensolver_davidson.lo libmatrices_la-eigensolver_utils.lo libmatrices_la-evectmatrix.lo libmatrices_la-linmin.lo libmatrices_la-matrices.lo libmatrices_la-minpack2-linmin.lo libmatrices_la-sqmatrix.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmatrices.a libmatrices_la-blasglue.o libmatrices_la-eigensolver.o libmatrices_la-eigensolver_davidson.o libmatrices_la-eigensolver_utils.o libmatrices_la-evectmatrix.o libmatrices_la-linmin.o libmatrices_la-matrices.o libmatrices_la-minpack2-linmin.o libmatrices_la-sqmatrix.o libtool: link: ranlib .libs/libmatrices.a libtool: link: ( cd ".libs" && rm -f "libmatrices.la" && ln -s "../libmatrices.la" "libmatrices.la" ) make[6]: Leaving directory '/<>/src/matrices' Making all in matrixio make[6]: Entering directory '/<>/src/matrixio' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-evectmatrixio.o -MD -MP -MF .deps/libmatrixio_a-evectmatrixio.Tpo -c -o libmatrixio_a-evectmatrixio.o `test -f 'evectmatrixio.c' || echo './'`evectmatrixio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-fieldio.o -MD -MP -MF .deps/libmatrixio_a-fieldio.Tpo -c -o libmatrixio_a-fieldio.o `test -f 'fieldio.c' || echo './'`fieldio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-matrixio.o -MD -MP -MF .deps/libmatrixio_a-matrixio.Tpo -c -o libmatrixio_a-matrixio.o `test -f 'matrixio.c' || echo './'`matrixio.c matrixio.c: In function ‘matrixio_open_’: matrixio.c:405:91: warning: statement with no effect [-Wunused-value] 405 | IF_EXCLUSIVE(if (parallel) mpi_begin_critical_section(matrixio_critical_section_tag),0); | ^ matrixio.c:56:32: note: in definition of macro ‘IF_EXCLUSIVE’ 56 | # define IF_EXCLUSIVE(yes,no) no | ^~ matrixio.c: In function ‘matrixio_close’: matrixio.c:432:94: warning: statement with no effect [-Wunused-value] 432 | IF_EXCLUSIVE(if (id.parallel) mpi_end_critical_section(matrixio_critical_section_tag++),0); | ^ matrixio.c:56:32: note: in definition of macro ‘IF_EXCLUSIVE’ 56 | # define IF_EXCLUSIVE(yes,no) no | ^~ In file included from matrixio.c:29: matrixio.c: In function ‘matrixio_open_dataset’: matrixio.c:516:30: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 516 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ matrixio.c: In function ‘matrixio_read_real_data’: matrixio.c:837:35: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 837 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fieldio.c:41:46: warning: argument 8 of type ‘const real *’ {aka ‘const double *’} declared as a pointer [-Warray-parameter=] 41 | const real *kvector, | ~~~~~~~~~~~~^~~~~~~ In file included from fieldio.c:28: matrixio.h:95:52: note: previously declared as an array ‘const real[3]’ {aka ‘const double[3]’} 95 | const real kvector[3], | ~~~~~~~~~~~^~~~~~~~~~ mv -f .deps/libmatrixio_a-evectmatrixio.Tpo .deps/libmatrixio_a-evectmatrixio.Po mv -f .deps/libmatrixio_a-fieldio.Tpo .deps/libmatrixio_a-fieldio.Po mv -f .deps/libmatrixio_a-matrixio.Tpo .deps/libmatrixio_a-matrixio.Po rm -f libmatrixio.a ar cru libmatrixio.a libmatrixio_a-evectmatrixio.o libmatrixio_a-fieldio.o libmatrixio_a-matrixio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmatrixio.a make[6]: Leaving directory '/<>/src/matrixio' Making all in maxwell make[6]: Entering directory '/<>/src/maxwell' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c -o libmaxwell_la-maxwell.lo `test -f 'maxwell.c' || echo './'`maxwell.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c -o libmaxwell_la-maxwell_constraints.lo `test -f 'maxwell_constraints.c' || echo './'`maxwell_constraints.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c -o libmaxwell_la-maxwell_eps.lo `test -f 'maxwell_eps.c' || echo './'`maxwell_eps.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c -o libmaxwell_la-maxwell_op.lo `test -f 'maxwell_op.c' || echo './'`maxwell_op.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c maxwell_op.c -o libmaxwell_la-maxwell_op.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c maxwell_constraints.c -o libmaxwell_la-maxwell_constraints.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c maxwell.c -o libmaxwell_la-maxwell.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c maxwell_eps.c -o libmaxwell_la-maxwell_eps.o maxwell_op.c: In function ‘maxwell_compute_fft’: maxwell_op.c:177:12: warning: unused variable ‘rarray_out’ [-Wunused-variable] 177 | real *rarray_out = (real *) array_out; | ^~~~~~~~~~ maxwell_op.c:175:12: warning: unused variable ‘rarray_in’ [-Wunused-variable] 175 | real *rarray_in = (real *) array_in; | ^~~~~~~~~ maxwell_op.c: In function ‘maxwell_vectorfield_otherhalf’: maxwell_op.c:637:50: warning: unused parameter ‘d’ [-Wunused-parameter] 637 | void maxwell_vectorfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~^ maxwell_op.c:637:69: warning: unused parameter ‘field’ [-Wunused-parameter] 637 | void maxwell_vectorfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~~~^~~~~ maxwell_op.c:638:41: warning: unused parameter ‘phasex’ [-Wunused-parameter] 638 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:638:54: warning: unused parameter ‘phasey’ [-Wunused-parameter] 638 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ In file included from maxwell_eps.c:29: maxwell_eps.c: In function ‘set_maxwell_dielectric’: maxwell_op.c:638:67: warning: unused parameter ‘phasez’ [-Wunused-parameter] 638 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ xyz_loop.h:28:28: warning: unused variable ‘n2’ [-Wunused-variable] 28 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ | ^~ maxwell_eps.c:421:6: note: in expansion of macro ‘LOOP_XYZ’ 421 | LOOP_XYZ(md) { | ^~~~~~~~ maxwell_eps.c:401:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 401 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ maxwell_eps.c:401:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 401 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ maxwell_op.c: In function ‘maxwell_cscalarfield_otherhalf’: maxwell_eps.c:401:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 401 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ maxwell_eps.c:395:16: warning: unused variable ‘k’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_op.c:841:51: warning: unused parameter ‘d’ [-Wunused-parameter] 841 | void maxwell_cscalarfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~^ maxwell_eps.c:395:13: warning: unused variable ‘j’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_op.c:841:70: warning: unused parameter ‘field’ [-Wunused-parameter] 841 | void maxwell_cscalarfield_otherhalf(maxwell_data *d, scalar_complex *field, | ~~~~~~~~~~~~~~~~^~~~~ maxwell_eps.c:395:10: warning: unused variable ‘i’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_op.c:842:42: warning: unused parameter ‘phasex’ [-Wunused-parameter] 842 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:842:55: warning: unused parameter ‘phasey’ [-Wunused-parameter] 842 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c:842:68: warning: unused parameter ‘phasez’ [-Wunused-parameter] 842 | real phasex, real phasey, real phasez) | ~~~~~^~~~~~ maxwell_op.c: In function ‘maxwell_scalarfield_otherhalf’: maxwell_op.c:1042:50: warning: unused parameter ‘d’ [-Wunused-parameter] 1042 | void maxwell_scalarfield_otherhalf(maxwell_data *d, real *field) | ~~~~~~~~~~~~~~^ maxwell_op.c:1042:59: warning: unused parameter ‘field’ [-Wunused-parameter] 1042 | void maxwell_scalarfield_otherhalf(maxwell_data *d, real *field) | ~~~~~~^~~~~ maxwell_eps.c: At top level: maxwell_eps.c:181:12: warning: ‘sym_matrix_eq’ defined but not used [-Wunused-function] 181 | static int sym_matrix_eq(symmetric_matrix V1, symmetric_matrix V2, double tol) | ^~~~~~~~~~~~~ mv -f .deps/libmaxwell_la-maxwell.Tpo .deps/libmaxwell_la-maxwell.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c -o libmaxwell_la-maxwell_pre.lo `test -f 'maxwell_pre.c' || echo './'`maxwell_pre.c mv -f .deps/libmaxwell_la-maxwell_constraints.Tpo .deps/libmaxwell_la-maxwell_constraints.Plo mv -f .deps/libmaxwell_la-maxwell_eps.Tpo .deps/libmaxwell_la-maxwell_eps.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c maxwell_pre.c -o libmaxwell_la-maxwell_pre.o mv -f .deps/libmaxwell_la-maxwell_op.Tpo .deps/libmaxwell_la-maxwell_op.Plo mv -f .deps/libmaxwell_la-maxwell_pre.Tpo .deps/libmaxwell_la-maxwell_pre.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmaxwell.la libmaxwell_la-maxwell.lo libmaxwell_la-maxwell_constraints.lo libmaxwell_la-maxwell_eps.lo libmaxwell_la-maxwell_op.lo libmaxwell_la-maxwell_pre.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmaxwell.a libmaxwell_la-maxwell.o libmaxwell_la-maxwell_constraints.o libmaxwell_la-maxwell_eps.o libmaxwell_la-maxwell_op.o libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmaxwell.a libtool: link: ( cd ".libs" && rm -f "libmaxwell.la" && ln -s "../libmaxwell.la" "libmaxwell.la" ) make[6]: Leaving directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -no-undefined -version-info 5:1:4 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmpb_mpi.la -rpath /usr/lib util/libutil.la matrices/libmatrices.la maxwell/libmaxwell.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: (cd .libs/libmpb_mpi.lax/libutil.a && ar x "/<>/src/util/.libs/libutil.a") libtool: link: (cd .libs/libmpb_mpi.lax/libmatrices.a && ar x "/<>/src/matrices/.libs/libmatrices.a") libtool: link: (cd .libs/libmpb_mpi.lax/libmaxwell.a && ar x "/<>/src/maxwell/.libs/libmaxwell.a") libtool: link: ar cr .libs/libmpb_mpi.a .libs/libmpb_mpi.lax/libutil.a/debug_malloc.o .libs/libmpb_mpi.lax/libutil.a/mpi_utils.o .libs/libmpb_mpi.lax/libutil.a/verbosity.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-blasglue.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-eigensolver.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-eigensolver_davidson.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-eigensolver_utils.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-evectmatrix.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-linmin.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-matrices.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-minpack2-linmin.o .libs/libmpb_mpi.lax/libmatrices.a/libmatrices_la-sqmatrix.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_constraints.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_eps.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_op.o .libs/libmpb_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmpb_mpi.a libtool: link: rm -fr .libs/libmpb_mpi.lax libtool: link: ( cd ".libs" && rm -f "libmpb_mpi.la" && ln -s "../libmpb_mpi.la" "libmpb_mpi.la" ) make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' Making all in tests make[4]: Entering directory '/<>/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT malloctest.o -MD -MP -MF .deps/malloctest.Tpo -c -o malloctest.o malloctest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT blastest.o -MD -MP -MF .deps/blastest.Tpo -c -o blastest.o blastest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT eigs_test.o -MD -MP -MF .deps/eigs_test.Tpo -c -o eigs_test.o eigs_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT maxwell_test.o -MD -MP -MF .deps/maxwell_test.Tpo -c -o maxwell_test.o maxwell_test.c eigs_test.c: In function ‘Aop’: eigs_test.c:293:51: warning: unused parameter ‘data’ [-Wunused-parameter] 293 | void Aop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:294:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:294:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Bop’: eigs_test.c:303:51: warning: unused parameter ‘data’ [-Wunused-parameter] 303 | void Bop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:304:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:304:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Ainvop’: eigs_test.c:313:54: warning: unused parameter ‘data’ [-Wunused-parameter] 313 | void Ainvop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:314:25: warning: unused parameter ‘Y’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:314:34: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c:314:54: warning: unused parameter ‘YtY’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~^~~ eigs_test.c: In function ‘Cop_old’: eigs_test.c:324:55: warning: unused parameter ‘data’ [-Wunused-parameter] 324 | void Cop_old(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:325:22: warning: unused parameter ‘Y’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:325:31: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c: In function ‘Cop’: eigs_test.c:349:51: warning: unused parameter ‘data’ [-Wunused-parameter] 349 | void Cop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:350:23: warning: unused parameter ‘Y’ [-Wunused-parameter] 350 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ mv -f .deps/malloctest.Tpo .deps/malloctest.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT normal_vectors-normal_vectors.o -MD -MP -MF .deps/normal_vectors-normal_vectors.Tpo -c -o normal_vectors-normal_vectors.o `test -f 'normal_vectors.c' || echo './'`normal_vectors.c mv -f .deps/blastest.Tpo .deps/blastest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/normal_vectors-normal_vectors.Tpo .deps/normal_vectors-normal_vectors.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/maxwell_test.Tpo .deps/maxwell_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/eigs_test.Tpo .deps/eigs_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/libmpb_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/<>/tests' Making all in mpb make[4]: Entering directory '/<>/mpb' cp -f /usr/share/libctl/base/main.c main.c cp -f /usr/share/libctl/utils/geom.c geom.c gen-ctl-io --header -o ctl-io.h mpb.scm /usr/share/libctl gen-ctl-io --code -o ctl-io.c mpb.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" make all-am make[5]: Entering directory '/<>/mpb' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-medium.o -MD -MP -MF .deps/mpb_mpi-medium.Tpo -c -o mpb_mpi-medium.o `test -f 'medium.c' || echo './'`medium.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-epsilon_file.o -MD -MP -MF .deps/mpb_mpi-epsilon_file.Tpo -c -o mpb_mpi-epsilon_file.o `test -f 'epsilon_file.c' || echo './'`epsilon_file.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-field-smob.o -MD -MP -MF .deps/mpb_mpi-field-smob.Tpo -c -o mpb_mpi-field-smob.o `test -f 'field-smob.c' || echo './'`field-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-fields.o -MD -MP -MF .deps/mpb_mpi-fields.Tpo -c -o mpb_mpi-fields.o `test -f 'fields.c' || echo './'`fields.c field-smob.c: In function ‘update_curfield_smob’: field-smob.c:142:10: warning: implicit declaration of function ‘strchr’ [-Wimplicit-function-declaration] 142 | if (strchr("dhbecv", curfield_type)) { /* complex vector field */ | ^~~~~~ field-smob.c:30:1: note: include ‘’ or provide a declaration of ‘strchr’ 29 | #include "mpb.h" +++ |+#include 30 | field-smob.c:142:10: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 142 | if (strchr("dhbecv", curfield_type)) { /* complex vector field */ | ^~~~~~ field-smob.c:142:10: note: include ‘’ or provide a declaration of ‘strchr’ field-smob.c: In function ‘cur_fieldp’: field-smob.c:176:22: warning: implicit declaration of function ‘strcmp’ [-Wimplicit-function-declaration] 176 | int ret = !strcmp(s, "cur-field"); | ^~~~~~ field-smob.c:176:22: note: include ‘’ or provide a declaration of ‘strcmp’ field-smob.c: In function ‘integrate_fieldL’: field-smob.c:409:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 409 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ field-smob.c:407:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ In file included from medium.c:75: epsilon.c: In function ‘get_epsilon’: field-smob.c:407:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ epsilon.c:434:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ epsilon.c:434:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ epsilon.c:434:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ epsilon.c:434:26: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ field-smob.c:407:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ epsilon.c:434:16: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ field-smob.c:407:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ In file included from medium.c:76: mu.c: In function ‘get_mu’: mu.c:434:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ mu.c:434:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ mu.c:434:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ mu.c:434:26: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ mu.c:434:16: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 434 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ field-smob.c: At top level: field-smob.c:395:17: warning: ‘cvector3_conj’ defined but not used [-Wunused-function] 395 | static cvector3 cvector3_conj(cvector3 c) | ^~~~~~~~~~~~~ fields.c: In function ‘compute_field_energy_internal’: fields.c:229:50: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ fields.c:229:46: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:229:42: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:229:25: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ fields.c:229:15: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 229 | int i, N, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ fields.c: In function ‘compute_field_energy’: fields.c:317:24: warning: implicit declaration of function ‘strchr’ [-Wimplicit-function-declaration] 317 | if (!curfield || !strchr("dhb", curfield_type)) { | ^~~~~~ fields.c:37:1: note: include ‘’ or provide a declaration of ‘strchr’ 36 | #include "field-smob.h" +++ |+#include 37 | fields.c:317:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 317 | if (!curfield || !strchr("dhb", curfield_type)) { | ^~~~~~ fields.c:317:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘compute_field_squared’: fields.c:358:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 358 | if (!curfield || !strchr("dhbecv", curfield_type)) { | ^~~~~~ fields.c:358:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘compute_field_divergence’: fields.c:379:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 379 | if (!curfield || !strchr("dhbec", curfield_type)) { | ^~~~~~ fields.c:379:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘fix_field_phase’: fields.c:449:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 449 | if (!curfield || !strchr("dhbecv", curfield_type)) { | ^~~~~~ fields.c:449:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘get_val’: fields.c:557:33: warning: unused parameter ‘ny’ [-Wunused-parameter] 557 | int nx, int ny, int nz, int last_dim_size, | ~~~~^~ fields.c:557:49: warning: unused parameter ‘last_dim_size’ [-Wunused-parameter] 557 | int nx, int ny, int nz, int last_dim_size, | ~~~~^~~~~~~~~~~~~ In file included from fields.c:25: fields.c: In function ‘get_energy_point’: fields.c:704:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 704 | CHECK(curfield && strchr("DHBR", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:704:24: note: include ‘’ or provide a declaration of ‘strchr’ 704 | CHECK(curfield && strchr("DHBR", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_bloch_field_point’: fields.c:714:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 714 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:714:24: note: include ‘’ or provide a declaration of ‘strchr’ 714 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_field_point’: fields.c:730:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 730 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:730:24: note: include ‘’ or provide a declaration of ‘strchr’ 730 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_bloch_cscalar_point’: fields.c:755:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 755 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:755:24: note: include ‘’ or provide a declaration of ‘strchr’ 755 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_cscalar_point’: fields.c:765:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 765 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:765:24: note: include ‘’ or provide a declaration of ‘strchr’ 765 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘compute_energy_in_dielectric’: fields.c:877:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 877 | if (!curfield || !strchr("DHBR", curfield_type)) { | ^~~~~~ fields.c:877:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:873:51: warning: variable ‘local_y_start’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~ fields.c:873:47: warning: variable ‘nz’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:873:43: warning: variable ‘nx’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~ fields.c:873:26: warning: variable ‘last_dim_stored’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~~~~~~~~ fields.c:873:16: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 873 | int N, i, last_dim, last_dim_stored, nx, nz, local_y_start; | ^~~~~~~~ fields.c: In function ‘fix_fname’: fields.c:927:26: warning: implicit declaration of function ‘strlen’ [-Wimplicit-function-declaration] 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:927:26: note: include ‘’ or provide a declaration of ‘strlen’ 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:927:26: warning: incompatible implicit declaration of built-in function ‘strlen’ [-Wbuiltin-declaration-mismatch] 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:927:26: note: include ‘’ or provide a declaration of ‘strlen’ 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:929:6: warning: implicit declaration of function ‘strcpy’ [-Wimplicit-function-declaration] 929 | strcpy(s, prefix ? prefix : ""); | ^~~~~~ fields.c:929:6: note: include ‘’ or provide a declaration of ‘strcpy’ fields.c:929:6: warning: incompatible implicit declaration of built-in function ‘strcpy’ [-Wbuiltin-declaration-mismatch] fields.c:929:6: note: include ‘’ or provide a declaration of ‘strcpy’ fields.c:930:6: warning: implicit declaration of function ‘strcat’ [-Wimplicit-function-declaration] 930 | strcat(s, fname ? fname : ""); | ^~~~~~ fields.c:930:6: note: include ‘’ or provide a declaration of ‘strcat’ fields.c:930:6: warning: incompatible implicit declaration of built-in function ‘strcat’ [-Wbuiltin-declaration-mismatch] fields.c:930:6: note: include ‘’ or provide a declaration of ‘strcat’ fields.c: In function ‘output_scalarfield’: fields.c:946:36: warning: unused parameter ‘last_dim_index’ [-Wunused-parameter] 946 | int last_dim_index, | ~~~~^~~~~~~~~~~~~~ fields.c:947:36: warning: unused parameter ‘last_dim_start’ [-Wunused-parameter] 947 | int last_dim_start, int last_dim_size, | ~~~~^~~~~~~~~~~~~~ fields.c:947:56: warning: unused parameter ‘last_dim_size’ [-Wunused-parameter] 947 | int last_dim_start, int last_dim_size, | ~~~~^~~~~~~~~~~~~ fields.c:948:36: warning: unused parameter ‘first_dim_start’ [-Wunused-parameter] 948 | int first_dim_start, int first_dim_size, | ~~~~^~~~~~~~~~~~~~~ fields.c:948:57: warning: unused parameter ‘first_dim_size’ [-Wunused-parameter] 948 | int first_dim_start, int first_dim_size, | ~~~~^~~~~~~~~~~~~~ fields.c:949:36: warning: unused parameter ‘write_start0_special’ [-Wunused-parameter] 949 | int write_start0_special) | ~~~~^~~~~~~~~~~~~~~~~~~~ fields.c: In function ‘output_field_to_file’: fields.c:1100:10: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1100 | if (strchr("Rv", curfield_type)) /* generic scalar/vector field */ | ^~~~~~ fields.c:1100:10: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1103:10: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1103 | if (strchr("dhbecv", curfield_type)) { /* outputting vector field */ | ^~~~~~ fields.c:1103:10: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1112:16: warning: incompatible implicit declaration of built-in function ‘strcat’ [-Wbuiltin-declaration-mismatch] 1112 | strcat(fname, comp_str); | ^~~~~~ fields.c:1112:16: note: include ‘’ or provide a declaration of ‘strcat’ fields.c: In function ‘compute_energy_in_object_list’: fields.c:1317:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1317 | if (!curfield || !strchr("DHBR", curfield_type)) { | ^~~~~~ fields.c:1317:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1322:6: warning: ‘geom_fix_objects0’ is deprecated [-Wdeprecated-declarations] 1322 | geom_fix_objects0(objects); | ^~~~~~~~~~~~~~~~~ In file included from fields.c:33: /usr/include/ctlgeom.h:65:13: note: declared here 65 | extern void geom_fix_objects0(GEOMETRIC_OBJECT_LIST geometry) CTLGEOM_DEPRECATED; | ^~~~~~~~~~~~~~~~~ In file included from fields.c:30: ../src/maxwell/xyz_loop.h:28:28: warning: unused variable ‘n2’ [-Wunused-variable] 28 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ | ^~ fields.c:1337:6: note: in expansion of macro ‘LOOP_XYZ’ 1337 | LOOP_XYZ(mdata) { | ^~~~~~~~ fields.c:1311:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 1311 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1311:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 1311 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ fields.c:1311:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 1311 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1309:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ fields.c:1309:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1309:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1309:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1309:16: warning: unused variable ‘k’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1309:13: warning: unused variable ‘j’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1309:10: warning: unused variable ‘i’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_field_integral’: fields.c:1387:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1387 | if (!curfield || !strchr("dhbeDHBRcv", curfield_type)) { | ^~~~~~ fields.c:1387:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1394:25: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1394 | integrate_energy = strchr("DHBR", curfield_type) != NULL; | ^~~~~~ fields.c:1394:25: note: include ‘’ or provide a declaration of ‘strchr’ ../src/maxwell/xyz_loop.h:28:28: warning: unused variable ‘n2’ [-Wunused-variable] 28 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ | ^~ fields.c:1409:6: note: in expansion of macro ‘LOOP_XYZ’ 1409 | LOOP_XYZ(mdata) { | ^~~~~~~~ fields.c:1379:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 1379 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1379:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 1379 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ fields.c:1379:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 1379 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1377:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ fields.c:1377:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1377:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1377:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1377:16: warning: unused variable ‘k’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:13: warning: unused variable ‘j’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:10: warning: unused variable ‘i’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_energy_integral’: fields.c:1531:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1531 | if (!curfield || !strchr("DHBR", curfield_type)) { | ^~~~~~ fields.c:1531:24: note: include ‘’ or provide a declaration of ‘strchr’ mv -f .deps/mpb_mpi-epsilon_file.Tpo .deps/mpb_mpi-epsilon_file.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-material_grid.o -MD -MP -MF .deps/mpb_mpi-material_grid.Tpo -c -o mpb_mpi-material_grid.o `test -f 'material_grid.c' || echo './'`material_grid.c mu.c: In function ‘mean_mu_func’: mu.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ mu.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ In file included from material_grid.c:27: material_grid.c: In function ‘material_grids_addgradient’: ../src/maxwell/xyz_loop.h:28:28: warning: unused variable ‘n2’ [-Wunused-variable] 28 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ | ^~ material_grid.c:419:6: note: in expansion of macro ‘LOOP_XYZ’ 419 | LOOP_XYZ(mdata) { | ^~~~~~~~ material_grid.c:392:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 392 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ material_grid.c:392:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 392 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ material_grid.c:392:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 392 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ material_grid.c:390:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ material_grid.c:390:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:390:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:390:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ material_grid.c:390:16: warning: unused variable ‘k’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:13: warning: unused variable ‘j’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: In function ‘print_material_grids_deps_du’: material_grid.c:545:16: warning: implicit declaration of function ‘memset’ [-Wimplicit-function-declaration] 545 | memset(v, 0, sizeof(double) * ntot); | ^~~~~~ material_grid.c:30:1: note: include ‘’ or provide a declaration of ‘memset’ 29 | #include "mpb.h" +++ |+#include 30 | material_grid.c:545:16: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 545 | memset(v, 0, sizeof(double) * ntot); | ^~~~~~ material_grid.c:545:16: note: include ‘’ or provide a declaration of ‘memset’ material_grid.c: In function ‘print_material_grids_deps_du_numeric’: material_grid.c:634:14: warning: unused variable ‘foo’ [-Wunused-variable] 634 | double *foo; | ^~~ material_grid.c: In function ‘match_eps_func’: material_grid.c:824:16: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 824 | if (grad) memset(work, 0, sizeof(double) * n); | ^~~~~~ material_grid.c:824:16: note: include ‘’ or provide a declaration of ‘memset’ material_grid.c:818:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 818 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ material_grid.c:816:54: warning: variable ‘last_dim’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~~ material_grid.c:816:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:816:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:816:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ material_grid.c: At top level: material_grid.c:807:15: warning: ‘match_eps_func’ defined but not used [-Wunused-function] 807 | static double match_eps_func(int n, const double *u, double *grad, void *data) | ^~~~~~~~~~~~~~ mv -f .deps/mpb_mpi-field-smob.Tpo .deps/mpb_mpi-field-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-material_grid_opt.o -MD -MP -MF .deps/mpb_mpi-material_grid_opt.Tpo -c -o mpb_mpi-material_grid_opt.o `test -f 'material_grid_opt.c' || echo './'`material_grid_opt.c epsilon.c: In function ‘mean_epsilon_func’: epsilon.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ epsilon.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ material_grid_opt.c: In function ‘mindiff_func’: material_grid_opt.c:59:15: warning: implicit declaration of function ‘memset’ [-Wimplicit-function-declaration] 59 | if (grad) memset(work, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:30:1: note: include ‘’ or provide a declaration of ‘memset’ 29 | #include "mpb.h" +++ |+#include 30 | material_grid_opt.c:59:15: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 59 | if (grad) memset(work, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:59:15: note: include ‘’ or provide a declaration of ‘memset’ material_grid_opt.c: In function ‘material_grids_min_tetm_gap’: material_grid_opt.c:90:43: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 90 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:91:44: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:91:60: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ material_grid_opt.c: In function ‘band_constraint’: material_grid_opt.c:191:16: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 191 | if (grad) memset(work, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:191:16: note: include ‘’ or provide a declaration of ‘memset’ material_grid_opt.c: In function ‘maxgap_func’: material_grid_opt.c:232:11: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 232 | memset(grad, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:232:11: note: include ‘’ or provide a declaration of ‘memset’ material_grid_opt.c: In function ‘material_grids_maxmin_gap’: material_grid_opt.c:258:48: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 258 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:259:49: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:259:65: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ mv -f .deps/mpb_mpi-material_grid_opt.Tpo .deps/mpb_mpi-material_grid_opt.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-matrix-smob.o -MD -MP -MF .deps/mpb_mpi-matrix-smob.Tpo -c -o mpb_mpi-matrix-smob.o `test -f 'matrix-smob.c' || echo './'`matrix-smob.c mv -f .deps/mpb_mpi-medium.Tpo .deps/mpb_mpi-medium.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-mpb.o -MD -MP -MF .deps/mpb_mpi-mpb.Tpo -c -o mpb_mpi-mpb.o `test -f 'mpb.c' || echo './'`mpb.c mv -f .deps/mpb_mpi-fields.Tpo .deps/mpb_mpi-fields.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-main.o -MD -MP -MF .deps/mpb_mpi-main.Tpo -c -o mpb_mpi-main.o `test -f 'main.c' || echo './'`main.c In file included from ctl-io.h:7, from main.c:37: main.c: In function ‘main_entry’: main.c:194:31: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 194 | gh_new_procedure("subplex", (SCM(*)(void))subplex_scm, 7, 0, 0); | ^ main.c:202:44: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 202 | gh_new_procedure("adaptive-integration", (SCM(*)(void))adaptive_integration_scm, 6, 0, 0); | ^ main.c:205:45: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^ mv -f .deps/mpb_mpi-material_grid.Tpo .deps/mpb_mpi-material_grid.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-geom.o -MD -MP -MF .deps/mpb_mpi-geom.Tpo -c -o mpb_mpi-geom.o `test -f 'geom.c' || echo './'`geom.c mv -f .deps/mpb_mpi-matrix-smob.Tpo .deps/mpb_mpi-matrix-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpb_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpb_mpi-ctl-io.o -MD -MP -MF .deps/mpb_mpi-ctl-io.Tpo -c -o mpb_mpi-ctl-io.o `test -f 'ctl-io.c' || echo './'`ctl-io.c mv -f .deps/mpb_mpi-main.Tpo .deps/mpb_mpi-main.Po geom.c: In function ‘overlap_integrand’: geom.c:1156:10: warning: unused variable ‘s’ [-Wunused-variable] 1156 | double s[2]; | ^ geom.c: In function ‘point_in_or_on_prism’: geom.c:2110:10: warning: unused variable ‘height’ [-Wunused-variable] 2110 | double height = prsm->height; | ^~~~~~ geom.c: In function ‘dcmp’: geom.c:2137:17: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c:2137:40: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c: In function ‘normal_to_prism’: geom.c:2357:11: warning: unused variable ‘axisp’ [-Wunused-variable] 2357 | vector3 axisp = vector3_scale(height, zhatp); | ^~~~~ geom.c: In function ‘triangle_normal’: geom.c:2548:10: warning: unused variable ‘nvnorm’ [-Wunused-variable] 2548 | double nvnorm = vector3_norm(nv); | ^~~~~~ ctl-io.c: In function ‘block_equal’: ctl-io.c:639:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 639 | else ; | ^ ctl-io.c: In function ‘cylinder_equal’: ctl-io.c:679:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 679 | else ; | ^ ctl-io.c: In function ‘geometric_object_equal’: ctl-io.c:716:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 716 | else ; | ^ ctl-io.c: In function ‘material_type_equal’: ctl-io.c:776:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 776 | else ; | ^ ctl-io.c: In function ‘lattice_destroy’: ctl-io.c:782:30: warning: unused parameter ‘o’ [-Wunused-parameter] 782 | void lattice_destroy(lattice o) | ~~~~~~~~^ ctl-io.c: In function ‘ellipsoid_destroy’: ctl-io.c:786:34: warning: unused parameter ‘o’ [-Wunused-parameter] 786 | void ellipsoid_destroy(ellipsoid o) | ~~~~~~~~~~^ ctl-io.c: In function ‘sphere_destroy’: ctl-io.c:845:28: warning: unused parameter ‘o’ [-Wunused-parameter] 845 | void sphere_destroy(sphere o) | ~~~~~~~^ ctl-io.c: In function ‘wedge_destroy’: ctl-io.c:849:26: warning: unused parameter ‘o’ [-Wunused-parameter] 849 | void wedge_destroy(wedge o) | ~~~~~~^ ctl-io.c: In function ‘cone_destroy’: ctl-io.c:853:24: warning: unused parameter ‘o’ [-Wunused-parameter] 853 | void cone_destroy(cone o) | ~~~~~^ ctl-io.c: In function ‘material_grid_destroy’: ctl-io.c:907:42: warning: unused parameter ‘o’ [-Wunused-parameter] 907 | void material_grid_destroy(material_grid o) | ~~~~~~~~~~~~~~^ ctl-io.c: In function ‘material_function_destroy’: ctl-io.c:911:50: warning: unused parameter ‘o’ [-Wunused-parameter] 911 | void material_function_destroy(material_function o) | ~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_anisotropic_destroy’: ctl-io.c:915:52: warning: unused parameter ‘o’ [-Wunused-parameter] 915 | void medium_anisotropic_destroy(medium_anisotropic o) | ~~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_destroy’: ctl-io.c:919:28: warning: unused parameter ‘o’ [-Wunused-parameter] 919 | void medium_destroy(medium o) | ~~~~~~~^ mv -f .deps/mpb_mpi-mpb.Tpo .deps/mpb_mpi-mpb.Po mv -f .deps/mpb_mpi-ctl-io.Tpo .deps/mpb_mpi-ctl-io.Po mv -f .deps/mpb_mpi-geom.Tpo .deps/mpb_mpi-geom.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpb_mpi mpb_mpi-medium.o mpb_mpi-epsilon_file.o mpb_mpi-field-smob.o mpb_mpi-fields.o mpb_mpi-material_grid.o mpb_mpi-material_grid_opt.o mpb_mpi-matrix-smob.o mpb_mpi-mpb.o mpb_mpi-main.o mpb_mpi-geom.o mpb_mpi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/libmpb_mpi.la -lctl -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpb_mpi mpb_mpi-medium.o mpb_mpi-epsilon_file.o mpb_mpi-field-smob.o mpb_mpi-fields.o mpb_mpi-material_grid.o mpb_mpi-material_grid_opt.o mpb_mpi-matrix-smob.o mpb_mpi-mpb.o mpb_mpi-main.o mpb_mpi-geom.o mpb_mpi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpb_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lctl -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath epsilon.c: In function 'mean_epsilon_func': epsilon.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ epsilon.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ mu.c: In function 'mean_mu_func': mu.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ mu.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' Making all in examples make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/examples' Making all in utils make[4]: Entering directory '/<>/utils' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/utils' make[4]: Entering directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make install prefix=/<>/debian/build-tmp/mpb-mpi/usr make[2]: Entering directory '/<>' Making install in src make[3]: Entering directory '/<>/src' make install-recursive make[4]: Entering directory '/<>/src' Making install in util make[5]: Entering directory '/<>/src/util' make install-am make[6]: Entering directory '/<>/src/util' make[7]: Entering directory '/<>/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' make[5]: Leaving directory '/<>/src/util' Making install in matrices make[5]: Entering directory '/<>/src/matrices' make[6]: Entering directory '/<>/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrices' make[5]: Leaving directory '/<>/src/matrices' Making install in matrixio make[5]: Entering directory '/<>/src/matrixio' make[6]: Entering directory '/<>/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrixio' make[5]: Leaving directory '/<>/src/matrixio' Making install in maxwell make[5]: Entering directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/maxwell' make[5]: Leaving directory '/<>/src/maxwell' make[5]: Entering directory '/<>/src' make[6]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpb_mpi.la '/<>/debian/build-tmp/mpb-mpi/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpb_mpi.lai /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpb_mpi.la libtool: install: /usr/bin/install -c .libs/libmpb_mpi.a /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpb_mpi.a libtool: install: chmod 644 /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpb_mpi.a libtool: install: ranlib /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpb_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/include' /usr/bin/install -c -m 644 mpb_mpi.h '/<>/debian/build-tmp/mpb-mpi/usr/include' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h util/verbosity.h '/<>/debian/build-tmp/mpb-mpi/usr/include/mpb' make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making install in tests make[3]: Entering directory '/<>/tests' make[4]: Entering directory '/<>/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/tests' make[3]: Leaving directory '/<>/tests' Making install in mpb make[3]: Entering directory '/<>/mpb' make install-am make[4]: Entering directory '/<>/mpb' make[5]: Entering directory '/<>/mpb' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpb_mpi '/<>/debian/build-tmp/mpb-mpi/usr/bin/./mpb-mpi' libtool: install: /usr/bin/install -c mpb_mpi /<>/debian/build-tmp/mpb-mpi/usr/bin/./mpb-mpi /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/<>/debian/build-tmp/mpb-mpi/usr/share/mpb' make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' make[3]: Leaving directory '/<>/mpb' Making install in examples make[3]: Entering directory '/<>/examples' make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/examples' make[3]: Leaving directory '/<>/examples' Making install in utils make[3]: Entering directory '/<>/utils' make[4]: Entering directory '/<>/utils' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' make[4]: Leaving directory '/<>/utils' make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make clean make[2]: Entering directory '/<>' Making clean in src make[3]: Entering directory '/<>/src' Making clean in util make[4]: Entering directory '/<>/src/util' rm -rf .libs _libs test -z "libutil.la" || rm -f libutil.la rm -f ./so_locations rm -f sphere_quad rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/util' Making clean in matrices make[4]: Entering directory '/<>/src/matrices' rm -rf .libs _libs test -z "libmatrices.la" || rm -f libmatrices.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/matrices' Making clean in matrixio make[4]: Entering directory '/<>/src/matrixio' rm -rf .libs _libs test -z "libmatrixio.a" || rm -f libmatrixio.a rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/matrixio' Making clean in maxwell make[4]: Entering directory '/<>/src/maxwell' rm -rf .libs _libs test -z "libmaxwell.la" || rm -f libmaxwell.la rm -f ./so_locations rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src/maxwell' make[4]: Entering directory '/<>/src' test -z "libmpb_mpi.la" || rm -f libmpb_mpi.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making clean in tests make[3]: Entering directory '/<>/tests' rm -rf .libs _libs rm -f blastest.out rm -f malloctest blastest eigs_test maxwell_test normal_vectors rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/tests' Making clean in mpb make[3]: Entering directory '/<>/mpb' rm -f mpb_mpi rm -rf .libs _libs rm -f ctl-io.* main.* geom.* rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/mpb' Making clean in examples make[3]: Entering directory '/<>/examples' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/<>/examples' Making clean in utils make[3]: Entering directory '/<>/utils' rm -rf .libs _libs rm -f *.o rm -f *.lo make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' echo "Step3: mpi version end" Step3: mpi version end # version with inverse symmetry with mpi echo "Step4: mpi inv version start" Step4: mpi inv version start #XXX dh_auto_configure -- --with-mpi --with-inv-symmetry --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode F77=gfortran CC=mpicc SH_JOB=/bin/bash ./configure --with-mpi --with-inv-symmetry --build=x86_64-linux-gnu --cache-file=../config.cache --prefix=/usr --mandir=\${prefix}/share/man --disable-silent-rules --with-libctl=/usr/share/libctl --enable-maintainer-mode configure: loading cache ../config.cache checking whether to enable maintainer-specific portions of Makefiles... yes checking for a BSD-compatible install... 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(cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for perl... (cached) /usr/bin/perl checking for vendor cc to be used instead of gcc... checking for cc... (cached) mpicc checking whether the compiler supports GNU C... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to enable C11 features... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) gcc3 *********************** INVERSION SYM. *********************** checking for sqrt in -lm... (cached) yes checking how to get verbose linking output from gfortran... (cached) -v checking for Fortran 77 libraries of gfortran... (cached) -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... (cached) none checking for Fortran 77 name-mangling scheme... (cached) lower case, underscore, no extra underscore checking for fftw_execute in -lfftw3... (cached) yes checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... (cached) no checking for ATL_xerbla in -latlas... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for dgemm_ in -ldgemm... (cached) no checking for sgemm_ in -lmkl... (cached) no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... (cached) no checking for sgemm_ in -ldxml... (cached) no checking for sgemm_ in -lscs... (cached) no checking for sgemm_ in -lcomplib.sgimath... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... (cached) no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... (cached) no checking for cheev_ in -llapack... (cached) yes checking for mpicc... (cached) mpicc checking for MPI_Init... (cached) yes checking for mpi.h... yes checking for fftw_mpi_execute_dft in -lfftw3_mpi... (cached) yes checking for mpirun... (cached) mpirun checking for deflate in -lz... (cached) yes checking for H5Pcreate in -lhdf5... (cached) yes checking for hdf5.h... (cached) yes checking for H5Pset_mpi... (cached) no checking for H5Pset_fapl_mpio... (cached) yes checking for guile... (cached) yes checking for guile-config... (cached) guile-config checking if linking to guile works... yes checking for libguile.h... (cached) yes checking for guile/gh.h... (cached) no checking for scm_make_smob_type... 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(cached) yes checking for inline... (cached) inline checking for getopt... (cached) yes checking for strncmp... (cached) yes checking whether calling BLAS zdotc works... yes checking for bash... (cached) /bin/bash checking for feenableexcept... (cached) yes checking whether feenableexcept declaration is usable... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Makefile config.status: creating tests/Makefile config.status: creating src/Makefile config.status: creating src/util/Makefile config.status: creating src/matrices/Makefile config.status: creating src/matrixio/Makefile config.status: creating src/maxwell/Makefile config.status: creating mpb/Makefile config.status: creating mpb/mpb.scm config.status: creating mpb/mpb-split-preinstall config.status: creating utils/Makefile config.status: creating config.h config.status: creating src/mpbconf.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build make -j4 make[2]: Entering directory '/<>' make all-recursive make[3]: Entering directory '/<>' Making all in src make[4]: Entering directory '/<>/src' cp -f mpbconf.h mpbi_mpi.h make all-recursive make[5]: Entering directory '/<>/src' Making all in util make[6]: Entering directory '/<>/src/util' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT sphere-quad.o -MD -MP -MF .deps/sphere-quad.Tpo -c -o sphere-quad.o sphere-quad.c mv -f .deps/sphere-quad.Tpo .deps/sphere-quad.Po /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o sphere_quad sphere-quad.o -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../../src/util/sphere_quad) > sphere-quad.h make all-am make[7]: Entering directory '/<>/src/util' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c -o debug_malloc.lo debug_malloc.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c -o mpi_utils.lo mpi_utils.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c -o verbosity.lo verbosity.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT verbosity.lo -MD -MP -MF .deps/verbosity.Tpo -c verbosity.c -o verbosity.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpi_utils.lo -MD -MP -MF .deps/mpi_utils.Tpo -c mpi_utils.c -o mpi_utils.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT debug_malloc.lo -MD -MP -MF .deps/debug_malloc.Tpo -c debug_malloc.c -o debug_malloc.o mv -f .deps/verbosity.Tpo .deps/verbosity.Plo mpi_utils.c: In function ‘mpi_one_printf’: mpi_utils.c:139:10: warning: ignoring return value of ‘vasprintf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 139 | vasprintf(&s, template, ap); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mv -f .deps/debug_malloc.Tpo .deps/debug_malloc.Plo mv -f .deps/mpi_utils.Tpo .deps/mpi_utils.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libutil.la debug_malloc.lo mpi_utils.lo verbosity.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libutil.a debug_malloc.o mpi_utils.o verbosity.o libtool: link: ranlib .libs/libutil.a libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' Making all in matrices make[6]: Entering directory '/<>/src/matrices' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c -o libmatrices_la-blasglue.lo `test -f 'blasglue.c' || echo './'`blasglue.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time 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.deps/libmatrices_la-eigensolver_davidson.Tpo -c -o libmatrices_la-eigensolver_davidson.lo `test -f 'eigensolver_davidson.c' || echo './'`eigensolver_davidson.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c -o libmatrices_la-eigensolver_utils.lo `test -f 'eigensolver_utils.c' || echo './'`eigensolver_utils.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_davidson.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_davidson.Tpo -c eigensolver_davidson.c -o libmatrices_la-eigensolver_davidson.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-blasglue.lo -MD -MP -MF .deps/libmatrices_la-blasglue.Tpo -c blasglue.c -o libmatrices_la-blasglue.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver.lo -MD -MP -MF .deps/libmatrices_la-eigensolver.Tpo -c eigensolver.c -o libmatrices_la-eigensolver.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-eigensolver_utils.lo -MD -MP -MF .deps/libmatrices_la-eigensolver_utils.Tpo -c eigensolver_utils.c -o libmatrices_la-eigensolver_utils.o mv -f .deps/libmatrices_la-eigensolver_utils.Tpo .deps/libmatrices_la-eigensolver_utils.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-evectmatrix.lo -MD -MP -MF .deps/libmatrices_la-evectmatrix.Tpo -c -o libmatrices_la-evectmatrix.lo `test -f 'evectmatrix.c' || echo './'`evectmatrix.c mv -f .deps/libmatrices_la-blasglue.Tpo .deps/libmatrices_la-blasglue.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util 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libmatrices_la-evectmatrix.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-linmin.lo -MD -MP -MF .deps/libmatrices_la-linmin.Tpo -c linmin.c -o libmatrices_la-linmin.o mv -f .deps/libmatrices_la-eigensolver_davidson.Tpo .deps/libmatrices_la-eigensolver_davidson.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat 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-D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c -o libmatrices_la-minpack2-linmin.lo `test -f 'minpack2-linmin.c' || echo './'`minpack2-linmin.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-minpack2-linmin.lo -MD -MP -MF .deps/libmatrices_la-minpack2-linmin.Tpo -c minpack2-linmin.c -o libmatrices_la-minpack2-linmin.o mv -f .deps/libmatrices_la-matrices.Tpo .deps/libmatrices_la-matrices.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c -o libmatrices_la-sqmatrix.lo `test -f 'sqmatrix.c' || echo './'`sqmatrix.c mv -f .deps/libmatrices_la-evectmatrix.Tpo .deps/libmatrices_la-evectmatrix.Plo libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrices_la-sqmatrix.lo -MD -MP -MF .deps/libmatrices_la-sqmatrix.Tpo -c sqmatrix.c -o libmatrices_la-sqmatrix.o mv -f .deps/libmatrices_la-minpack2-linmin.Tpo .deps/libmatrices_la-minpack2-linmin.Plo mv -f .deps/libmatrices_la-sqmatrix.Tpo .deps/libmatrices_la-sqmatrix.Plo mv -f .deps/libmatrices_la-eigensolver.Tpo .deps/libmatrices_la-eigensolver.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmatrices.la libmatrices_la-blasglue.lo libmatrices_la-eigensolver.lo libmatrices_la-eigensolver_davidson.lo libmatrices_la-eigensolver_utils.lo libmatrices_la-evectmatrix.lo libmatrices_la-linmin.lo libmatrices_la-matrices.lo libmatrices_la-minpack2-linmin.lo libmatrices_la-sqmatrix.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmatrices.a libmatrices_la-blasglue.o libmatrices_la-eigensolver.o libmatrices_la-eigensolver_davidson.o libmatrices_la-eigensolver_utils.o libmatrices_la-evectmatrix.o libmatrices_la-linmin.o libmatrices_la-matrices.o libmatrices_la-minpack2-linmin.o libmatrices_la-sqmatrix.o libtool: link: ranlib .libs/libmatrices.a libtool: link: ( cd ".libs" && rm -f "libmatrices.la" && ln -s "../libmatrices.la" "libmatrices.la" ) make[6]: Leaving directory '/<>/src/matrices' Making all in matrixio make[6]: Entering directory '/<>/src/matrixio' mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-evectmatrixio.o -MD -MP -MF .deps/libmatrixio_a-evectmatrixio.Tpo -c -o libmatrixio_a-evectmatrixio.o `test -f 'evectmatrixio.c' || echo './'`evectmatrixio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-fieldio.o -MD -MP -MF .deps/libmatrixio_a-fieldio.Tpo -c -o libmatrixio_a-fieldio.o `test -f 'fieldio.c' || echo './'`fieldio.c mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmatrixio_a-matrixio.o -MD -MP -MF .deps/libmatrixio_a-matrixio.Tpo -c -o libmatrixio_a-matrixio.o `test -f 'matrixio.c' || echo './'`matrixio.c matrixio.c: In function ‘matrixio_open_’: matrixio.c:405:91: warning: statement with no effect [-Wunused-value] 405 | IF_EXCLUSIVE(if (parallel) mpi_begin_critical_section(matrixio_critical_section_tag),0); | ^ matrixio.c:56:32: note: in definition of macro ‘IF_EXCLUSIVE’ 56 | # define IF_EXCLUSIVE(yes,no) no | ^~ matrixio.c: In function ‘matrixio_close’: matrixio.c:432:94: warning: statement with no effect [-Wunused-value] 432 | IF_EXCLUSIVE(if (id.parallel) mpi_end_critical_section(matrixio_critical_section_tag++),0); | ^ matrixio.c:56:32: note: in definition of macro ‘IF_EXCLUSIVE’ 56 | # define IF_EXCLUSIVE(yes,no) no | ^~ In file included from matrixio.c:29: matrixio.c: In function ‘matrixio_open_dataset’: matrixio.c:516:30: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 516 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ matrixio.c: In function ‘matrixio_read_real_data’: matrixio.c:837:35: warning: comparison of integer expressions of different signedness: ‘hsize_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 837 | CHECK(dims_copy[i] == dims[i], | ^~ ./../util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fieldio.c:41:46: warning: argument 8 of type ‘const real *’ {aka ‘const double *’} declared as a pointer [-Warray-parameter=] 41 | const real *kvector, | ~~~~~~~~~~~~^~~~~~~ In file included from fieldio.c:28: matrixio.h:95:52: note: previously declared as an array ‘const real[3]’ {aka ‘const double[3]’} 95 | const real kvector[3], | ~~~~~~~~~~~^~~~~~~~~~ mv -f .deps/libmatrixio_a-evectmatrixio.Tpo .deps/libmatrixio_a-evectmatrixio.Po mv -f .deps/libmatrixio_a-fieldio.Tpo .deps/libmatrixio_a-fieldio.Po mv -f .deps/libmatrixio_a-matrixio.Tpo .deps/libmatrixio_a-matrixio.Po rm -f libmatrixio.a ar cru libmatrixio.a libmatrixio_a-evectmatrixio.o libmatrixio_a-fieldio.o libmatrixio_a-matrixio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmatrixio.a make[6]: Leaving directory '/<>/src/matrixio' Making all in maxwell make[6]: Entering directory '/<>/src/maxwell' /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c -o libmaxwell_la-maxwell.lo `test -f 'maxwell.c' || echo './'`maxwell.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c -o libmaxwell_la-maxwell_constraints.lo `test -f 'maxwell_constraints.c' || echo './'`maxwell_constraints.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c -o libmaxwell_la-maxwell_eps.lo `test -f 'maxwell_eps.c' || echo './'`maxwell_eps.c /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c -o libmaxwell_la-maxwell_op.lo `test -f 'maxwell_op.c' || echo './'`maxwell_op.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell.lo -MD -MP -MF .deps/libmaxwell_la-maxwell.Tpo -c maxwell.c -o libmaxwell_la-maxwell.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_eps.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_eps.Tpo -c maxwell_eps.c -o libmaxwell_la-maxwell_eps.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_constraints.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_constraints.Tpo -c maxwell_constraints.c -o libmaxwell_la-maxwell_constraints.o libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_op.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_op.Tpo -c maxwell_op.c -o libmaxwell_la-maxwell_op.o In file included from maxwell_eps.c:29: maxwell_eps.c: In function ‘set_maxwell_dielectric’: xyz_loop.h:54:28: warning: unused variable ‘n2’ [-Wunused-variable] 54 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ | ^~ maxwell_eps.c:421:6: note: in expansion of macro ‘LOOP_XYZ’ 421 | LOOP_XYZ(md) { | ^~~~~~~~ maxwell_eps.c:404:27: warning: unused variable ‘rank’ [-Wunused-variable] 404 | int n_other, n_last, rank; | ^~~~ maxwell_eps.c:404:19: warning: unused variable ‘n_last’ [-Wunused-variable] 404 | int n_other, n_last, rank; | ^~~~~~ maxwell_eps.c:404:10: warning: unused variable ‘n_other’ [-Wunused-variable] 404 | int n_other, n_last, rank; | ^~~~~~~ maxwell_eps.c:401:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 401 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ maxwell_eps.c:401:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 401 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ maxwell_eps.c:401:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 401 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ maxwell_eps.c:395:16: warning: unused variable ‘k’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:13: warning: unused variable ‘j’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_eps.c:395:10: warning: unused variable ‘i’ [-Wunused-variable] 395 | int i, j, k; | ^ maxwell_op.c: In function ‘project_c2t’: maxwell_op.c:51:54: warning: unused variable ‘az_i’ [-Wunused-variable] 51 | real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); | ^~~~ maxwell_op.c:51:32: warning: unused variable ‘ay_i’ [-Wunused-variable] 51 | real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); | ^~~~ maxwell_op.c:51:10: warning: unused variable ‘ax_i’ [-Wunused-variable] 51 | real ax_i=SCALAR_IM(a[0]), ay_i=SCALAR_IM(a[1]), az_i=SCALAR_IM(a[2]); | ^~~~ maxwell_eps.c: At top level: maxwell_eps.c:181:12: warning: ‘sym_matrix_eq’ defined but not used [-Wunused-function] 181 | static int sym_matrix_eq(symmetric_matrix V1, symmetric_matrix V2, double tol) | ^~~~~~~~~~~~~ mv -f .deps/libmaxwell_la-maxwell.Tpo .deps/libmaxwell_la-maxwell.Plo /bin/bash ../../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c -o libmaxwell_la-maxwell_pre.lo `test -f 'maxwell_pre.c' || echo './'`maxwell_pre.c libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I./../util -I./../matrices -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT libmaxwell_la-maxwell_pre.lo -MD -MP -MF .deps/libmaxwell_la-maxwell_pre.Tpo -c maxwell_pre.c -o libmaxwell_la-maxwell_pre.o mv -f .deps/libmaxwell_la-maxwell_constraints.Tpo .deps/libmaxwell_la-maxwell_constraints.Plo mv -f .deps/libmaxwell_la-maxwell_eps.Tpo .deps/libmaxwell_la-maxwell_eps.Plo mv -f .deps/libmaxwell_la-maxwell_pre.Tpo .deps/libmaxwell_la-maxwell_pre.Plo mv -f .deps/libmaxwell_la-maxwell_op.Tpo .deps/libmaxwell_la-maxwell_op.Plo /bin/bash ../../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmaxwell.la libmaxwell_la-maxwell.lo libmaxwell_la-maxwell_constraints.lo libmaxwell_la-maxwell_eps.lo libmaxwell_la-maxwell_op.lo libmaxwell_la-maxwell_pre.lo -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: ar cr .libs/libmaxwell.a libmaxwell_la-maxwell.o libmaxwell_la-maxwell_constraints.o libmaxwell_la-maxwell_eps.o libmaxwell_la-maxwell_op.o libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmaxwell.a libtool: link: ( cd ".libs" && rm -f "libmaxwell.la" && ln -s "../libmaxwell.la" "libmaxwell.la" ) make[6]: Leaving directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -no-undefined -version-info 5:1:4 -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o libmpbi_mpi.la -rpath /usr/lib util/libutil.la matrices/libmatrices.la maxwell/libmaxwell.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: (cd .libs/libmpbi_mpi.lax/libutil.a && ar x "/<>/src/util/.libs/libutil.a") libtool: link: (cd .libs/libmpbi_mpi.lax/libmatrices.a && ar x "/<>/src/matrices/.libs/libmatrices.a") libtool: link: (cd .libs/libmpbi_mpi.lax/libmaxwell.a && ar x "/<>/src/maxwell/.libs/libmaxwell.a") libtool: link: ar cr .libs/libmpbi_mpi.a .libs/libmpbi_mpi.lax/libutil.a/debug_malloc.o .libs/libmpbi_mpi.lax/libutil.a/mpi_utils.o .libs/libmpbi_mpi.lax/libutil.a/verbosity.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-blasglue.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-eigensolver.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-eigensolver_davidson.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-eigensolver_utils.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-evectmatrix.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-linmin.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-matrices.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-minpack2-linmin.o .libs/libmpbi_mpi.lax/libmatrices.a/libmatrices_la-sqmatrix.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_constraints.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_eps.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_op.o .libs/libmpbi_mpi.lax/libmaxwell.a/libmaxwell_la-maxwell_pre.o libtool: link: ranlib .libs/libmpbi_mpi.a libtool: link: rm -fr .libs/libmpbi_mpi.lax libtool: link: ( cd ".libs" && rm -f "libmpbi_mpi.la" && ln -s "../libmpbi_mpi.la" "libmpbi_mpi.la" ) make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' Making all in tests make[4]: Entering directory '/<>/tests' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT malloctest.o -MD -MP -MF .deps/malloctest.Tpo -c -o malloctest.o malloctest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT blastest.o -MD -MP -MF .deps/blastest.Tpo -c -o blastest.o blastest.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT eigs_test.o -MD -MP -MF .deps/eigs_test.Tpo -c -o eigs_test.o eigs_test.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT maxwell_test.o -MD -MP -MF .deps/maxwell_test.Tpo -c -o maxwell_test.o maxwell_test.c eigs_test.c: In function ‘Aop’: eigs_test.c:293:51: warning: unused parameter ‘data’ [-Wunused-parameter] 293 | void Aop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:294:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:294:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 294 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Bop’: eigs_test.c:303:51: warning: unused parameter ‘data’ [-Wunused-parameter] 303 | void Bop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:304:14: warning: unused parameter ‘is_current_eigenvector’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~^~~~~~~~~~~~~~~~~~~~~~ eigs_test.c:304:50: warning: unused parameter ‘Work’ [-Wunused-parameter] 304 | int is_current_eigenvector, evectmatrix Work) | ~~~~~~~~~~~~^~~~ eigs_test.c: In function ‘Ainvop’: eigs_test.c:313:54: warning: unused parameter ‘data’ [-Wunused-parameter] 313 | void Ainvop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:314:25: warning: unused parameter ‘Y’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:314:34: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c:314:54: warning: unused parameter ‘YtY’ [-Wunused-parameter] 314 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~^~~ eigs_test.c: In function ‘Cop_old’: eigs_test.c:324:55: warning: unused parameter ‘data’ [-Wunused-parameter] 324 | void Cop_old(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:325:22: warning: unused parameter ‘Y’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ eigs_test.c:325:31: warning: unused parameter ‘eigenvals’ [-Wunused-parameter] 325 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~^~~~~~~~~ eigs_test.c: In function ‘Cop’: eigs_test.c:349:51: warning: unused parameter ‘data’ [-Wunused-parameter] 349 | void Cop(evectmatrix Xin, evectmatrix Xout, void *data, | ~~~~~~^~~~ eigs_test.c:350:23: warning: unused parameter ‘Y’ [-Wunused-parameter] 350 | evectmatrix Y, real *eigenvals, sqmatrix YtY) | ~~~~~~~~~~~~^ mv -f .deps/malloctest.Tpo .deps/malloctest.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I../src/util -I../src/matrices -I../src/maxwell -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT normal_vectors-normal_vectors.o -MD -MP -MF .deps/normal_vectors-normal_vectors.Tpo -c -o normal_vectors-normal_vectors.o `test -f 'normal_vectors.c' || echo './'`normal_vectors.c mv -f .deps/blastest.Tpo .deps/blastest.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o malloctest malloctest.o ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath mv -f .deps/normal_vectors-normal_vectors.Tpo .deps/normal_vectors-normal_vectors.Po mv -f .deps/maxwell_test.Tpo .deps/maxwell_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath mv -f .deps/eigs_test.Tpo .deps/eigs_test.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/libmpbi_mpi.la -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o normal_vectors normal_vectors-normal_vectors.o -lctlgeom ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o blastest blastest.o ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o maxwell_test maxwell_test.o ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o eigs_test eigs_test.o ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/<>/tests' Making all in mpb make[4]: Entering directory '/<>/mpb' cp -f /usr/share/libctl/base/main.c main.c cp -f /usr/share/libctl/utils/geom.c geom.c gen-ctl-io --header -o ctl-io.h mpb.scm /usr/share/libctl gen-ctl-io --code -o ctl-io.c mpb.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; WARNING: compilation of /usr/share/libctl/base/include.scm failed: ;;; failed to create path for auto-compiled file "/usr/share/libctl/base/include.scm" make all-am make[5]: Entering directory '/<>/mpb' mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-medium.o -MD -MP -MF .deps/mpbi_mpi-medium.Tpo -c -o mpbi_mpi-medium.o `test -f 'medium.c' || echo './'`medium.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-epsilon_file.o -MD -MP -MF .deps/mpbi_mpi-epsilon_file.Tpo -c -o mpbi_mpi-epsilon_file.o `test -f 'epsilon_file.c' || echo './'`epsilon_file.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-field-smob.o -MD -MP -MF .deps/mpbi_mpi-field-smob.Tpo -c -o mpbi_mpi-field-smob.o `test -f 'field-smob.c' || echo './'`field-smob.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-fields.o -MD -MP -MF .deps/mpbi_mpi-fields.Tpo -c -o mpbi_mpi-fields.o `test -f 'fields.c' || echo './'`fields.c field-smob.c: In function ‘update_curfield_smob’: field-smob.c:142:10: warning: implicit declaration of function ‘strchr’ [-Wimplicit-function-declaration] 142 | if (strchr("dhbecv", curfield_type)) { /* complex vector field */ | ^~~~~~ field-smob.c:30:1: note: include ‘’ or provide a declaration of ‘strchr’ 29 | #include "mpb.h" +++ |+#include 30 | field-smob.c:142:10: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 142 | if (strchr("dhbecv", curfield_type)) { /* complex vector field */ | ^~~~~~ field-smob.c:142:10: note: include ‘’ or provide a declaration of ‘strchr’ field-smob.c: In function ‘cur_fieldp’: field-smob.c:176:22: warning: implicit declaration of function ‘strcmp’ [-Wimplicit-function-declaration] 176 | int ret = !strcmp(s, "cur-field"); | ^~~~~~ field-smob.c:176:22: note: include ‘’ or provide a declaration of ‘strcmp’ fields.c: In function ‘compute_field_energy’: field-smob.c: In function ‘integrate_fieldL’: fields.c:317:24: warning: implicit declaration of function ‘strchr’ [-Wimplicit-function-declaration] 317 | if (!curfield || !strchr("dhb", curfield_type)) { | ^~~~~~ fields.c:37:1: note: include ‘’ or provide a declaration of ‘strchr’ 36 | #include "field-smob.h" +++ |+#include 37 | fields.c:317:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 317 | if (!curfield || !strchr("dhb", curfield_type)) { | ^~~~~~ fields.c:317:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘compute_field_squared’: fields.c:358:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 358 | if (!curfield || !strchr("dhbecv", curfield_type)) { | ^~~~~~ fields.c:358:24: note: include ‘’ or provide a declaration of ‘strchr’ field-smob.c:407:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c: In function ‘compute_field_divergence’: fields.c:379:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 379 | if (!curfield || !strchr("dhbec", curfield_type)) { | ^~~~~~ field-smob.c:407:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:379:24: note: include ‘’ or provide a declaration of ‘strchr’ field-smob.c:407:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 407 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c: In function ‘fix_field_phase’: fields.c:449:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 449 | if (!curfield || !strchr("dhbecv", curfield_type)) { | ^~~~~~ fields.c:449:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:446:13: warning: unused variable ‘theta’ [-Wunused-variable] 446 | double theta; | ^~~~~ fields.c:444:31: warning: unused variable ‘sq_sum’ [-Wunused-variable] 444 | real sq_sum2[2] = {0,0}, sq_sum[2], maxabs = 0.0; | ^~~~~~ fields.c:444:11: warning: unused variable ‘sq_sum2’ [-Wunused-variable] 444 | real sq_sum2[2] = {0,0}, sq_sum[2], maxabs = 0.0; | ^~~~~~~ In file included from fields.c:25: fields.c: In function ‘get_energy_point’: fields.c:704:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 704 | CHECK(curfield && strchr("DHBR", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:704:24: note: include ‘’ or provide a declaration of ‘strchr’ 704 | CHECK(curfield && strchr("DHBR", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_bloch_field_point’: fields.c:714:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 714 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:714:24: note: include ‘’ or provide a declaration of ‘strchr’ 714 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_field_point’: fields.c:730:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 730 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:730:24: note: include ‘’ or provide a declaration of ‘strchr’ 730 | CHECK(curfield && strchr("dhbecv", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_bloch_cscalar_point’: fields.c:755:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 755 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:755:24: note: include ‘’ or provide a declaration of ‘strchr’ 755 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘get_cscalar_point’: fields.c:765:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 765 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c:765:24: note: include ‘’ or provide a declaration of ‘strchr’ 765 | CHECK(curfield && strchr("C", curfield_type), | ^~~~~~ ../src/util/check.h:37:12: note: in definition of macro ‘CHECK’ 37 | if (!(condition)) { \ | ^~~~~~~~~ fields.c: In function ‘compute_energy_in_dielectric’: fields.c:877:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 877 | if (!curfield || !strchr("DHBR", curfield_type)) { | ^~~~~~ fields.c:877:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c: In function ‘fix_fname’: fields.c:927:26: warning: implicit declaration of function ‘strlen’ [-Wimplicit-function-declaration] 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:927:26: note: include ‘’ or provide a declaration of ‘strlen’ 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:927:26: warning: incompatible implicit declaration of built-in function ‘strlen’ [-Wbuiltin-declaration-mismatch] 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:927:26: note: include ‘’ or provide a declaration of ‘strlen’ 927 | (fname ? strlen(fname) : 0) + | ^~~~~~ ../src/util/check.h:61:33: note: in definition of macro ‘CHK_MALLOC’ 61 | size_t CHK_MALLOC_n_tmp = (n); \ | ^ fields.c:929:6: warning: implicit declaration of function ‘strcpy’ [-Wimplicit-function-declaration] 929 | strcpy(s, prefix ? prefix : ""); | ^~~~~~ fields.c:929:6: note: include ‘’ or provide a declaration of ‘strcpy’ fields.c:929:6: warning: incompatible implicit declaration of built-in function ‘strcpy’ [-Wbuiltin-declaration-mismatch] fields.c:929:6: note: include ‘’ or provide a declaration of ‘strcpy’ fields.c:930:6: warning: implicit declaration of function ‘strcat’ [-Wimplicit-function-declaration] 930 | strcat(s, fname ? fname : ""); | ^~~~~~ fields.c:930:6: note: include ‘’ or provide a declaration of ‘strcat’ fields.c:930:6: warning: incompatible implicit declaration of built-in function ‘strcat’ [-Wbuiltin-declaration-mismatch] fields.c:930:6: note: include ‘’ or provide a declaration of ‘strcat’ fields.c: In function ‘output_field_to_file’: fields.c:1100:10: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1100 | if (strchr("Rv", curfield_type)) /* generic scalar/vector field */ | ^~~~~~ fields.c:1100:10: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1103:10: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1103 | if (strchr("dhbecv", curfield_type)) { /* outputting vector field */ | ^~~~~~ fields.c:1103:10: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1112:16: warning: incompatible implicit declaration of built-in function ‘strcat’ [-Wbuiltin-declaration-mismatch] 1112 | strcat(fname, comp_str); | ^~~~~~ fields.c:1112:16: note: include ‘’ or provide a declaration of ‘strcat’ fields.c: In function ‘compute_energy_in_object_list’: fields.c:1317:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1317 | if (!curfield || !strchr("DHBR", curfield_type)) { | ^~~~~~ fields.c:1317:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1322:6: warning: ‘geom_fix_objects0’ is deprecated [-Wdeprecated-declarations] 1322 | geom_fix_objects0(objects); | ^~~~~~~~~~~~~~~~~ In file included from fields.c:33: /usr/include/ctlgeom.h:65:13: note: declared here 65 | extern void geom_fix_objects0(GEOMETRIC_OBJECT_LIST geometry) CTLGEOM_DEPRECATED; | ^~~~~~~~~~~~~~~~~ In file included from fields.c:30: ../src/maxwell/xyz_loop.h:54:28: warning: unused variable ‘n2’ [-Wunused-variable] 54 | int n1 = md->nx, n2 = md->ny, n3 = md->nz, i1, i2_, i3; \ | ^~ fields.c:1337:6: note: in expansion of macro ‘LOOP_XYZ’ 1337 | LOOP_XYZ(mdata) { | ^~~~~~~~ fields.c:1311:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 1311 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1311:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 1311 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ fields.c:1311:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 1311 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1309:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1309:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1309:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1309:10: warning: unused variable ‘i’ [-Wunused-variable] 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_field_integral’: fields.c:1387:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1387 | if (!curfield || !strchr("dhbeDHBRcv", curfield_type)) { | ^~~~~~ fields.c:1387:24: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1394:25: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1394 | integrate_energy = strchr("DHBR", curfield_type) != NULL; | ^~~~~~ fields.c:1394:25: note: include ‘’ or provide a declaration of ‘strchr’ fields.c:1379:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 1379 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1379:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 1379 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ fields.c:1379:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 1379 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ fields.c:1377:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ fields.c:1377:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ fields.c:1377:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ fields.c:1377:10: warning: unused variable ‘i’ [-Wunused-variable] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c: In function ‘compute_energy_integral’: fields.c:1531:24: warning: incompatible implicit declaration of built-in function ‘strchr’ [-Wbuiltin-declaration-mismatch] 1531 | if (!curfield || !strchr("DHBR", curfield_type)) { | ^~~~~~ fields.c:1531:24: note: include ‘’ or provide a declaration of ‘strchr’ mv -f .deps/mpbi_mpi-epsilon_file.Tpo .deps/mpbi_mpi-epsilon_file.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-material_grid.o -MD -MP -MF .deps/mpbi_mpi-material_grid.Tpo -c -o mpbi_mpi-material_grid.o `test -f 'material_grid.c' || echo './'`material_grid.c In file included from medium.c:76: mu.c: In function ‘mean_mu_func’: mu.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ mu.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ material_grid.c: In function ‘material_grids_addgradient’: material_grid.c:392:35: warning: unused variable ‘local_n3’ [-Wunused-variable] 392 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ material_grid.c:392:20: warning: unused variable ‘local_y_start’ [-Wunused-variable] 392 | int local_n2, local_y_start, local_n3; | ^~~~~~~~~~~~~ material_grid.c:392:10: warning: unused variable ‘local_n2’ [-Wunused-variable] 392 | int local_n2, local_y_start, local_n3; | ^~~~~~~~ material_grid.c:390:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:390:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:390:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ material_grid.c:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: In function ‘print_material_grids_deps_du’: material_grid.c:545:16: warning: implicit declaration of function ‘memset’ [-Wimplicit-function-declaration] 545 | memset(v, 0, sizeof(double) * ntot); | ^~~~~~ material_grid.c:30:1: note: include ‘’ or provide a declaration of ‘memset’ 29 | #include "mpb.h" +++ |+#include 30 | material_grid.c:545:16: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 545 | memset(v, 0, sizeof(double) * ntot); | ^~~~~~ material_grid.c:545:16: note: include ‘’ or provide a declaration of ‘memset’ material_grid.c: In function ‘print_material_grids_deps_du_numeric’: material_grid.c:634:14: warning: unused variable ‘foo’ [-Wunused-variable] 634 | double *foo; | ^~~ material_grid.c: In function ‘match_eps_func’: material_grid.c:824:16: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 824 | if (grad) memset(work, 0, sizeof(double) * n); | ^~~~~~ material_grid.c:824:16: note: include ‘’ or provide a declaration of ‘memset’ material_grid.c:816:48: warning: variable ‘rank’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~ material_grid.c:816:40: warning: variable ‘n_last’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~ material_grid.c:816:31: warning: variable ‘n_other’ set but not used [-Wunused-but-set-variable] 816 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^~~~~~~ material_grid.c: At top level: material_grid.c:807:15: warning: ‘match_eps_func’ defined but not used [-Wunused-function] 807 | static double match_eps_func(int n, const double *u, double *grad, void *data) | ^~~~~~~~~~~~~~ In file included from medium.c:75: epsilon.c: In function ‘mean_epsilon_func’: epsilon.c:271:20: warning: ‘shiftby1’ may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ~~~~~~~~~^~~~~~~~~~ epsilon.c:195:14: note: ‘shiftby1’ declared here 195 | vector3 shiftby1, shiftby2, normal; | ^~~~~~~~ mv -f .deps/mpbi_mpi-field-smob.Tpo .deps/mpbi_mpi-field-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-material_grid_opt.o -MD -MP -MF .deps/mpbi_mpi-material_grid_opt.Tpo -c -o mpbi_mpi-material_grid_opt.o `test -f 'material_grid_opt.c' || echo './'`material_grid_opt.c material_grid.c: In function ‘material_grids_addgradient’: material_grid.c:390:13: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:16: warning: ‘k’ may be used uninitialized [-Wmaybe-uninitialized] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid_opt.c: In function ‘mindiff_func’: material_grid_opt.c:59:15: warning: implicit declaration of function ‘memset’ [-Wimplicit-function-declaration] 59 | if (grad) memset(work, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:30:1: note: include ‘’ or provide a declaration of ‘memset’ 29 | #include "mpb.h" +++ |+#include 30 | material_grid_opt.c:59:15: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 59 | if (grad) memset(work, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:59:15: note: include ‘’ or provide a declaration of ‘memset’ material_grid_opt.c: In function ‘material_grids_min_tetm_gap’: material_grid_opt.c:90:43: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 90 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:91:44: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:91:60: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 91 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ material_grid_opt.c: In function ‘band_constraint’: material_grid_opt.c:191:16: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 191 | if (grad) memset(work, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:191:16: note: include ‘’ or provide a declaration of ‘memset’ material_grid_opt.c: In function ‘maxgap_func’: material_grid_opt.c:232:11: warning: incompatible implicit declaration of built-in function ‘memset’ [-Wbuiltin-declaration-mismatch] 232 | memset(grad, 0, sizeof(double) * (n-2)); | ^~~~~~ material_grid_opt.c:232:11: note: include ‘’ or provide a declaration of ‘memset’ material_grid_opt.c: In function ‘material_grids_maxmin_gap’: material_grid_opt.c:258:48: warning: unused parameter ‘func_tol’ [-Wunused-parameter] 258 | number func_tol, number eps_tol, | ~~~~~~~^~~~~~~~ material_grid_opt.c:259:49: warning: unused parameter ‘maxeval’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~~^~~~~~~ material_grid_opt.c:259:65: warning: unused parameter ‘maxtime’ [-Wunused-parameter] 259 | integer maxeval, number maxtime) | ~~~~~~~^~~~~~~ mv -f .deps/mpbi_mpi-medium.Tpo .deps/mpbi_mpi-medium.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-matrix-smob.o -MD -MP -MF .deps/mpbi_mpi-matrix-smob.Tpo -c -o mpbi_mpi-matrix-smob.o `test -f 'matrix-smob.c' || echo './'`matrix-smob.c fields.c: In function ‘compute_energy_in_object_list’: fields.c:1352:47: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 1352 | last_index = j + local_y_start; | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ fields.c:1309:13: note: ‘j’ was declared here 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1358:55: warning: ‘k’ may be used uninitialized [-Wmaybe-uninitialized] 1358 | if (last_index != 0 && 2*last_index != last_dim) | ~^~~~~~~~~~~ fields.c:1309:16: note: ‘k’ was declared here 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ mv -f .deps/mpbi_mpi-material_grid_opt.Tpo .deps/mpbi_mpi-material_grid_opt.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-mpb.o -MD -MP -MF .deps/mpbi_mpi-mpb.Tpo -c -o mpbi_mpi-mpb.o `test -f 'mpb.c' || echo './'`mpb.c fields.c: In function ‘compute_field_integral’: fields.c:1377:13: warning: ‘j’ may be used uninitialized [-Wmaybe-uninitialized] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:16: warning: ‘k’ may be used uninitialized [-Wmaybe-uninitialized] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ mv -f .deps/mpbi_mpi-fields.Tpo .deps/mpbi_mpi-fields.Po mv -f .deps/mpbi_mpi-material_grid.Tpo .deps/mpbi_mpi-material_grid.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-main.o -MD -MP -MF .deps/mpbi_mpi-main.Tpo -c -o mpbi_mpi-main.o `test -f 'main.c' || echo './'`main.c mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-geom.o -MD -MP -MF .deps/mpbi_mpi-geom.Tpo -c -o mpbi_mpi-geom.o `test -f 'geom.c' || echo './'`geom.c In file included from ctl-io.h:7, from main.c:37: main.c: In function ‘main_entry’: main.c:194:31: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 194 | gh_new_procedure("subplex", (SCM(*)(void))subplex_scm, 7, 0, 0); | ^ main.c:202:44: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 202 | gh_new_procedure("adaptive-integration", (SCM(*)(void))adaptive_integration_scm, 6, 0, 0); | ^ main.c:205:45: warning: cast between incompatible function types from ‘struct scm_unused_struct * (*)(struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *, struct scm_unused_struct *)’ to ‘struct scm_unused_struct * (*)(void)’ [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^ mv -f .deps/mpbi_mpi-matrix-smob.Tpo .deps/mpbi_mpi-matrix-smob.Po mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include/guile/3.0 -I../src/util -I../src/matrices -I../src/matrixio -I../src/maxwell -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/mpb/mpb.scm'"' -DVERSION_STRING='"'"mpbi_mpi 1.11.1, Copyright (C) 1999-2012, MIT"'"' -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/openmpi -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -MT mpbi_mpi-ctl-io.o -MD -MP -MF .deps/mpbi_mpi-ctl-io.Tpo -c -o mpbi_mpi-ctl-io.o `test -f 'ctl-io.c' || echo './'`ctl-io.c geom.c: In function ‘overlap_integrand’: geom.c:1156:10: warning: unused variable ‘s’ [-Wunused-variable] 1156 | double s[2]; | ^ geom.c: In function ‘point_in_or_on_prism’: geom.c:2110:10: warning: unused variable ‘height’ [-Wunused-variable] 2110 | double height = prsm->height; | ^~~~~~ geom.c: In function ‘dcmp’: geom.c:2137:17: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c:2137:40: warning: cast discards ‘const’ qualifier from pointer target type [-Wcast-qual] 2137 | double d1 = *((double *)pd1), d2 = *((double *)pd2); | ^ geom.c: In function ‘normal_to_prism’: geom.c:2357:11: warning: unused variable ‘axisp’ [-Wunused-variable] 2357 | vector3 axisp = vector3_scale(height, zhatp); | ^~~~~ geom.c: In function ‘triangle_normal’: geom.c:2548:10: warning: unused variable ‘nvnorm’ [-Wunused-variable] 2548 | double nvnorm = vector3_norm(nv); | ^~~~~~ ctl-io.c: In function ‘block_equal’: ctl-io.c:639:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 639 | else ; | ^ ctl-io.c: In function ‘cylinder_equal’: ctl-io.c:679:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 679 | else ; | ^ ctl-io.c: In function ‘geometric_object_equal’: ctl-io.c:716:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 716 | else ; | ^ ctl-io.c: In function ‘material_type_equal’: ctl-io.c:776:6: warning: suggest braces around empty body in an ‘else’ statement [-Wempty-body] 776 | else ; | ^ ctl-io.c: In function ‘lattice_destroy’: ctl-io.c:782:30: warning: unused parameter ‘o’ [-Wunused-parameter] 782 | void lattice_destroy(lattice o) | ~~~~~~~~^ ctl-io.c: In function ‘ellipsoid_destroy’: ctl-io.c:786:34: warning: unused parameter ‘o’ [-Wunused-parameter] 786 | void ellipsoid_destroy(ellipsoid o) | ~~~~~~~~~~^ ctl-io.c: In function ‘sphere_destroy’: ctl-io.c:845:28: warning: unused parameter ‘o’ [-Wunused-parameter] 845 | void sphere_destroy(sphere o) | ~~~~~~~^ ctl-io.c: In function ‘wedge_destroy’: ctl-io.c:849:26: warning: unused parameter ‘o’ [-Wunused-parameter] 849 | void wedge_destroy(wedge o) | ~~~~~~^ ctl-io.c: In function ‘cone_destroy’: ctl-io.c:853:24: warning: unused parameter ‘o’ [-Wunused-parameter] 853 | void cone_destroy(cone o) | ~~~~~^ ctl-io.c: In function ‘material_grid_destroy’: ctl-io.c:907:42: warning: unused parameter ‘o’ [-Wunused-parameter] 907 | void material_grid_destroy(material_grid o) | ~~~~~~~~~~~~~~^ ctl-io.c: In function ‘material_function_destroy’: ctl-io.c:911:50: warning: unused parameter ‘o’ [-Wunused-parameter] 911 | void material_function_destroy(material_function o) | ~~~~~~~~~~~~~~~~~~^ mv -f .deps/mpbi_mpi-main.Tpo .deps/mpbi_mpi-main.Po ctl-io.c: In function ‘medium_anisotropic_destroy’: ctl-io.c:915:52: warning: unused parameter ‘o’ [-Wunused-parameter] 915 | void medium_anisotropic_destroy(medium_anisotropic o) | ~~~~~~~~~~~~~~~~~~~^ ctl-io.c: In function ‘medium_destroy’: ctl-io.c:919:28: warning: unused parameter ‘o’ [-Wunused-parameter] 919 | void medium_destroy(medium o) | ~~~~~~~^ mv -f .deps/mpbi_mpi-mpb.Tpo .deps/mpbi_mpi-mpb.Po mv -f .deps/mpbi_mpi-ctl-io.Tpo .deps/mpbi_mpi-ctl-io.Po mv -f .deps/mpbi_mpi-geom.Tpo .deps/mpbi_mpi-geom.Po /bin/bash ../libtool --tag=CC --mode=link mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpbi_mpi mpbi_mpi-medium.o mpbi_mpi-epsilon_file.o mpbi_mpi-field-smob.o mpbi_mpi-fields.o mpbi_mpi-material_grid.o mpbi_mpi-material_grid_opt.o mpbi_mpi-matrix-smob.o mpbi_mpi-mpb.o mpbi_mpi-main.o mpbi_mpi-geom.o mpbi_mpi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/libmpbi_mpi.la -lctl -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lgfortran -lm -lquadmath libtool: link: mpicc -g -O2 -ffile-prefix-map=/<>=. -fdebug-prefix-map=/<>=/usr/src/mpb-1.11.1-5 -flto=auto -ffat-lto-objects -flto=auto -ffat-lto-objects -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -o mpbi_mpi mpbi_mpi-medium.o mpbi_mpi-epsilon_file.o mpbi_mpi-field-smob.o mpbi_mpi-fields.o mpbi_mpi-material_grid.o mpbi_mpi-material_grid_opt.o mpbi_mpi-matrix-smob.o mpbi_mpi-mpb.o mpbi_mpi-main.o mpbi_mpi-geom.o mpbi_mpi-ctl-io.o ../src/matrixio/libmatrixio.a ../src/.libs/libmpbi_mpi.a -L/usr/lib/gcc/x86_64-linux-gnu/12 -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/12/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lctl -lguile-3.0 -lgc -lpthread -ldl -lhdf5 -lz -lfftw3_mpi -llapack -lblas -lfftw3 -lgfortran -lm -lquadmath epsilon.c: In function 'mean_epsilon_func': epsilon.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ epsilon.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ mu.c: In function 'mean_mu_func': mu.c:271:20: warning: 'shiftby1' may be used uninitialized [-Wmaybe-uninitialized] 271 | shiftby2 = shiftby1; | ^ mu.c:195:14: note: 'shiftby1' declared here 195 | vector3 shiftby1, shiftby2, normal; | ^ fields.c: In function 'compute_field_integral': fields.c:1377:13: warning: 'j' may be used uninitialized [-Wmaybe-uninitialized] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ fields.c:1377:16: warning: 'k' may be used uninitialized [-Wmaybe-uninitialized] 1377 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c: In function 'material_grids_addgradient': material_grid.c:390:13: warning: 'j' may be used uninitialized [-Wmaybe-uninitialized] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ material_grid.c:390:16: warning: 'k' may be used uninitialized [-Wmaybe-uninitialized] 390 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ In function 'compute_energy_in_object_list', inlined from 'compute_energy_in_object_list_aux' at ctl-io.c:2249:16: fields.c:1352:47: warning: 'j' may be used uninitialized [-Wmaybe-uninitialized] 1352 | last_index = j + local_y_start; | ^ fields.c: In function 'compute_energy_in_object_list_aux': fields.c:1309:13: note: 'j' was declared here 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ In function 'compute_energy_in_object_list', inlined from 'compute_energy_in_object_list_aux' at ctl-io.c:2249:16: fields.c:1358:55: warning: 'k' may be used uninitialized [-Wmaybe-uninitialized] 1358 | if (last_index != 0 && 2*last_index != last_dim) | ^ fields.c: In function 'compute_energy_in_object_list_aux': fields.c:1309:16: note: 'k' was declared here 1309 | int i, j, k, n1, n2, n3, n_other, n_last, rank, last_dim; | ^ make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' Making all in examples make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/examples' Making all in utils make[4]: Entering directory '/<>/utils' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/utils' make[4]: Entering directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' echo "Step4: mpi inv version end" Step4: mpi inv version end make install prefix=/<>/debian/build-tmp/mpb-mpi/usr make[2]: Entering directory '/<>' Making install in src make[3]: Entering directory '/<>/src' make install-recursive make[4]: Entering directory '/<>/src' Making install in util make[5]: Entering directory '/<>/src/util' make install-am make[6]: Entering directory '/<>/src/util' make[7]: Entering directory '/<>/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' make[5]: Leaving directory '/<>/src/util' Making install in matrices make[5]: Entering directory '/<>/src/matrices' make[6]: Entering directory '/<>/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrices' make[5]: Leaving directory '/<>/src/matrices' Making install in matrixio make[5]: Entering directory '/<>/src/matrixio' make[6]: Entering directory '/<>/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrixio' make[5]: Leaving directory '/<>/src/matrixio' Making install in maxwell make[5]: Entering directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/maxwell' make[5]: Leaving directory '/<>/src/maxwell' make[5]: Entering directory '/<>/src' make[6]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpbi_mpi.la '/<>/debian/build-tmp/mpb-mpi/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpbi_mpi.lai /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.la libtool: install: /usr/bin/install -c .libs/libmpbi_mpi.a /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.a libtool: install: chmod 644 /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.a libtool: install: ranlib /<>/debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/include' /usr/bin/install -c -m 644 mpbi_mpi.h '/<>/debian/build-tmp/mpb-mpi/usr/include' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h util/verbosity.h '/<>/debian/build-tmp/mpb-mpi/usr/include/mpb' make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making install in tests make[3]: Entering directory '/<>/tests' make[4]: Entering directory '/<>/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/tests' make[3]: Leaving directory '/<>/tests' Making install in mpb make[3]: Entering directory '/<>/mpb' make install-am make[4]: Entering directory '/<>/mpb' make[5]: Entering directory '/<>/mpb' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpbi_mpi '/<>/debian/build-tmp/mpb-mpi/usr/bin/./mpbi-mpi' libtool: install: /usr/bin/install -c mpbi_mpi /<>/debian/build-tmp/mpb-mpi/usr/bin/./mpbi-mpi /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/<>/debian/build-tmp/mpb-mpi/usr/share/mpb' make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' make[3]: Leaving directory '/<>/mpb' Making install in examples make[3]: Entering directory '/<>/examples' make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/examples' make[3]: Leaving directory '/<>/examples' Making install in utils make[3]: Entering directory '/<>/utils' make[4]: Entering directory '/<>/utils' /usr/bin/mkdir -p '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/<>/debian/build-tmp/mpb-mpi/usr/share/man/man1' make[4]: Leaving directory '/<>/utils' make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' #make clean <- still needed in dh_auto_install # clear depdenncy_libs in *.la sed -i "/dependency_libs/ s/'.*'/''/" `find /<>/debian/build-tmp/* -name '*.la'` # create mpbi-data.1 cp /<>/debian/build-tmp/mpb/usr/share/man/man1/mpb-data.1 /<>/debian/build-tmp/mpb/usr/share/man/man1/mpbi-data.1 make[1]: Leaving directory '/<>' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' # tests are done during build, so nothing to do here make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/<>' # last build is for inv + mpi dh_auto_install make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/<>' Making install in src make[3]: Entering directory '/<>/src' make install-recursive make[4]: Entering directory '/<>/src' Making install in util make[5]: Entering directory '/<>/src/util' make install-am make[6]: Entering directory '/<>/src/util' make[7]: Entering directory '/<>/src/util' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/<>/src/util' make[6]: Leaving directory '/<>/src/util' make[5]: Leaving directory '/<>/src/util' Making install in matrices make[5]: Entering directory '/<>/src/matrices' make[6]: Entering directory '/<>/src/matrices' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrices' make[5]: Leaving directory '/<>/src/matrices' Making install in matrixio make[5]: Entering directory '/<>/src/matrixio' make[6]: Entering directory '/<>/src/matrixio' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/matrixio' make[5]: Leaving directory '/<>/src/matrixio' Making install in maxwell make[5]: Entering directory '/<>/src/maxwell' make[6]: Entering directory '/<>/src/maxwell' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/<>/src/maxwell' make[5]: Leaving directory '/<>/src/maxwell' make[5]: Entering directory '/<>/src' make[6]: Entering directory '/<>/src' /usr/bin/mkdir -p '/<>/debian/tmp/usr/lib' /bin/bash ../libtool --mode=install /usr/bin/install -c libmpbi_mpi.la '/<>/debian/tmp/usr/lib' libtool: install: /usr/bin/install -c .libs/libmpbi_mpi.lai /<>/debian/tmp/usr/lib/libmpbi_mpi.la libtool: install: /usr/bin/install -c .libs/libmpbi_mpi.a /<>/debian/tmp/usr/lib/libmpbi_mpi.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/libmpbi_mpi.a libtool: install: ranlib /<>/debian/tmp/usr/lib/libmpbi_mpi.a libtool: warning: remember to run 'libtool --finish /usr/lib' /usr/bin/mkdir -p '/<>/debian/tmp/usr/include' /usr/bin/install -c -m 644 mpbi_mpi.h '/<>/debian/tmp/usr/include' /usr/bin/mkdir -p '/<>/debian/tmp/usr/include/mpb' /usr/bin/install -c -m 644 matrices/eigensolver.h matrices/matrices.h matrices/scalar.h maxwell/maxwell.h util/verbosity.h '/<>/debian/tmp/usr/include/mpb' make[6]: Leaving directory '/<>/src' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making install in tests make[3]: Entering directory '/<>/tests' make[4]: Entering directory '/<>/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/tests' make[3]: Leaving directory '/<>/tests' Making install in mpb make[3]: Entering directory '/<>/mpb' make install-am make[4]: Entering directory '/<>/mpb' make[5]: Entering directory '/<>/mpb' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c mpbi_mpi '/<>/debian/tmp/usr/bin/./mpbi-mpi' libtool: install: /usr/bin/install -c mpbi_mpi /<>/debian/tmp/usr/bin/./mpbi-mpi /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-split.1 mpb.1 '/<>/debian/tmp/usr/share/man/man1' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/mpb' /usr/bin/install -c -m 644 mpb.scm '/<>/debian/tmp/usr/share/mpb' make[5]: Leaving directory '/<>/mpb' make[4]: Leaving directory '/<>/mpb' make[3]: Leaving directory '/<>/mpb' Making install in examples make[3]: Entering directory '/<>/examples' make[4]: Entering directory '/<>/examples' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/examples' make[3]: Leaving directory '/<>/examples' Making install in utils make[3]: Entering directory '/<>/utils' make[4]: Entering directory '/<>/utils' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 mpb-data.1 '/<>/debian/tmp/usr/share/man/man1' make[4]: Leaving directory '/<>/utils' make[3]: Leaving directory '/<>/utils' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' rm -f config.cache ../config.cache make[1]: Leaving directory '/<>' dh_install debian/rules override_dh_installdocs make[1]: Entering directory '/<>' dh_installdocs rm -rf debian/mpb-doc/usr/share/doc/mpb-doc/html/mpb-mkdocs-theme/license make[1]: Leaving directory '/<>' dh_installchangelogs debian/rules override_dh_installexamples make[1]: Entering directory '/<>' dh_installexamples rm -f debian/mpb-doc/usr/share/doc/mpb*/examples/Makefile rm -f debian/mpb-doc/usr/share/doc/mpb*/examples/Makefile.gz make[1]: Leaving directory '/<>' dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_missing: warning: usr/bin/mpbi-mpi exists in debian/tmp but is not installed to anywhere (related file: "debian/build-tmp/mpb-mpi/usr/bin/mpbi-mpi") dh_missing: warning: usr/include/mpb/eigensolver.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/mpb/matrices.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/mpb/maxwell.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/mpb/scalar.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/mpb/verbosity.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/include/mpbi_mpi.h exists in debian/tmp but is not installed to anywhere (related file: "debian/build-tmp/mpb-mpi/usr/include/mpbi_mpi.h") dh_missing: warning: usr/lib/libmpbi_mpi.a exists in debian/tmp but is not installed to anywhere (related file: "debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.a") dh_missing: warning: usr/lib/libmpbi_mpi.la exists in debian/tmp but is not installed to anywhere (related file: "debian/build-tmp/mpb-mpi/usr/lib/libmpbi_mpi.la") dh_missing: warning: usr/share/man/man1/mpb-data.1 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/man/man1/mpb-split.1 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/man/man1/mpb.1 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/mpb/mpb.scm exists in debian/tmp but is not installed to anywhere (related file: "debian/build-tmp/mpb/usr/share/mpb/mpb.scm") While detecting missing files, dh_missing noted some files with a similar name to those that were missing. This warning /might/ be resolved by replacing references to the missing files with the similarly named ones that dh_missing found - assuming the content is identical. As an example, you might want to replace: * debian/build-tmp/mpb-mpi/usr/bin/mpbi-mpi with: * usr/bin/mpbi-mpi in a file in debian/ or as argument to one of the dh_* tools called from debian/rules. (Note it is possible the paths are not used verbatim but instead directories containing or globs matching them are used instead) Alternatively, add the missing file to debian/not-installed if it cannot and should not be used. The following debhelper tools have reported what they installed (with files per package) * dh_install: mpb (11), mpb-dev (5), mpb-doc (4), mpb-mpi (6), mpb-scm (1) * dh_installdocs: mpb (2), mpb-dev (0), mpb-doc (0), mpb-mpi (0), mpb-scm (0) * dh_installexamples: mpb (0), mpb-dev (0), mpb-doc (17), mpb-mpi (0), mpb-scm (0) * dh_installman: mpb (1), mpb-dev (0), mpb-doc (0), mpb-mpi (1), mpb-scm (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. dh_dwz dh_strip debugedit: debian/mpb/usr/bin/mpb: Unknown DWARF DW_FORM_0x1f20 7d0d8e0dd17f046eb13bda5e4614be2e01d710d7 debugedit: debian/mpb/usr/bin/mpbi-data: Unknown DWARF DW_FORM_0x1f20 7567868b5e23995b0aeff7d5b900c730c61c063e debugedit: debian/mpb/usr/bin/mpb-data: Unknown DWARF DW_FORM_0x1f20 7567868b5e23995b0aeff7d5b900c730c61c063e debugedit: debian/mpb/usr/bin/mpbi: Unknown DWARF DW_FORM_0x1f20 1d92b940f9bff6bb71392ae9669dd975bb205154 debugedit: debian/mpb-mpi/usr/bin/mpb-mpi: Unknown DWARF DW_FORM_0x1f20 dc1cae708c52864fe13691908940fbe5c4a0da22 debugedit: debian/mpb-mpi/usr/bin/mpbi-mpi: Unknown DWARF DW_FORM_0x1f20 0179bbf94f873868c52ee080c3634c035252d309 dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb INFO: pkgstriptranslations version 149 INFO: pkgstriptranslations version 149 INFO: pkgstriptranslations version 149 INFO: pkgstriptranslations version 149 pkgstriptranslations: processing mpb (in debian/mpb); do_strip: , oemstrip: pkgstriptranslations: processing mpb-doc (in debian/mpb-doc); do_strip: , oemstrip: pkgstriptranslations: processing mpb-mpi (in debian/mpb-mpi); do_strip: , oemstrip: pkgstriptranslations: processing mpb-scm (in debian/mpb-scm); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/mpb/DEBIAN/control, package mpb, directory debian/mpb Skipping arch: any to arch: all dependency to mpb-scm pkgstripfiles: processing control file: debian/mpb-doc/DEBIAN/control, package mpb-doc, directory debian/mpb-doc pkgstripfiles: Running PNG optimization (using 4 cpus) for package mpb ... pkgstripfiles: No PNG files. INFO: pkgstripfiles: waiting for lock (mpb-doc) ... dpkg-deb: building package 'mpb' in '../mpb_1.11.1-5_amd64.deb'. pkgstripfiles: processing control file: debian/mpb-scm/DEBIAN/control, package mpb-scm, directory debian/mpb-scm INFO: pkgstripfiles: waiting for lock (mpb-scm) ... pkgstripfiles: processing control file: debian/mpb-mpi/DEBIAN/control, package mpb-mpi, directory debian/mpb-mpi Skipping arch: any to arch: all dependency to mpb-scm pkgstripfiles: Running PNG optimization (using 4 cpus) for package mpb-mpi ... pkgstripfiles: No PNG files. dpkg-deb: building package 'mpb-mpi' in '../mpb-mpi_1.11.1-5_amd64.deb'. INFO: pkgstriptranslations version 149 INFO: pkgstriptranslations version 149 pkgstriptranslations: processing mpb-dbgsym (in debian/.debhelper/mpb/dbgsym-root); do_strip: , oemstrip: pkgstriptranslations: processing mpb-mpi-dbgsym (in debian/.debhelper/mpb-mpi/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/mpb/dbgsym-root/DEBIAN/control, package mpb-dbgsym, directory debian/.debhelper/mpb/dbgsym-root dpkg-deb: building package 'mpb-dbgsym' in 'debian/.debhelper/scratch-space/build-mpb/mpb-dbgsym_1.11.1-5_amd64.deb'. pkgstripfiles: processing control file: debian/.debhelper/mpb-mpi/dbgsym-root/DEBIAN/control, package mpb-mpi-dbgsym, directory debian/.debhelper/mpb-mpi/dbgsym-root dpkg-deb: building package 'mpb-mpi-dbgsym' in 'debian/.debhelper/scratch-space/build-mpb-mpi/mpb-mpi-dbgsym_1.11.1-5_amd64.deb'. Renaming mpb-dbgsym_1.11.1-5_amd64.deb to mpb-dbgsym_1.11.1-5_amd64.ddeb Renaming mpb-mpi-dbgsym_1.11.1-5_amd64.deb to mpb-mpi-dbgsym_1.11.1-5_amd64.ddeb pkgstripfiles: Disabled PNG optimization for -doc package mpb-doc (to save build time) dpkg-deb: building package 'mpb-doc' in '../mpb-doc_1.11.1-5_all.deb'. INFO: pkgstripfiles: waiting for lock (mpb-scm) ... INFO: pkgstriptranslations version 149 pkgstriptranslations: processing mpb-dev (in debian/mpb-dev); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/mpb-dev/DEBIAN/control, package mpb-dev, directory debian/mpb-dev pkgstripfiles: Running PNG optimization (using 4 cpus) for package mpb-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'mpb-dev' in '../mpb-dev_1.11.1-5_amd64.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package mpb-scm ... pkgstripfiles: No PNG files. dpkg-deb: building package 'mpb-scm' in '../mpb-scm_1.11.1-5_all.deb'. dpkg-genbuildinfo --build=binary -O../mpb_1.11.1-5_amd64.buildinfo dpkg-genchanges --build=binary -mLaunchpad Build Daemon -O../mpb_1.11.1-5_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-12-15T05:24:20Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ mpb_1.11.1-5_amd64.changes: --------------------------- Format: 1.8 Date: Wed, 14 Dec 2022 22:17:01 +0100 Source: mpb Binary: mpb mpb-dev mpb-doc mpb-mpi mpb-scm Built-For-Profiles: noudeb Architecture: amd64 all Version: 1.11.1-5 Distribution: lunar-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Thorsten Alteholz Description: mpb - MIT Photonic-Bands mpb-dev - MIT Photonic-Bands development files mpb-doc - MIT Photonic-Bands documentation mpb-mpi - MIT Photonic-Bands, parallel (mpich) version mpb-scm - MIT Photonic-Bands initialisation files Changes: mpb (1.11.1-5) unstable; urgency=medium . * debian/control: bump Standards Version to 4.6.1 (no changes) * debian/watch: update github watch file Checksums-Sha1: 18213770e9ace40355c13f3cdc681aee3744e1c8 591964 mpb-dbgsym_1.11.1-5_amd64.ddeb 24c9875a5528dffd0e424e0a0cf41d9ad67ddfaa 8082 mpb-dev_1.11.1-5_amd64.deb af0c03072b5b7c354e91377d51363bc99cc49244 1125030 mpb-doc_1.11.1-5_all.deb 4205b8ef09afe7641cd815d029a99429f76f03d5 573062 mpb-mpi-dbgsym_1.11.1-5_amd64.ddeb 19f2d23450e72d9705f82a3aaa8f37f374fc8af5 247484 mpb-mpi_1.11.1-5_amd64.deb 8b86bceed726710c199f10f659474b37b9358205 12052 mpb-scm_1.11.1-5_all.deb b044449823d9f0b065eb2a247a1c4594f9191e71 11176 mpb_1.11.1-5_amd64.buildinfo babc69fb9fc0ccee55d680bbc0770685a62b3dc1 270182 mpb_1.11.1-5_amd64.deb Checksums-Sha256: 9089c7b776f3ee735e9caab1fd9f61c7517b83577c95fe5dce30e6c3f046a641 591964 mpb-dbgsym_1.11.1-5_amd64.ddeb e9ca12f6e0799c0175a6e027fbcc8621523194d4ce2aacd8b30efc7c754277e5 8082 mpb-dev_1.11.1-5_amd64.deb 5e887ffdbbdcee4a8f80421c57363b25149570673d9523619573c6ded476db51 1125030 mpb-doc_1.11.1-5_all.deb 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mpb-scm_1.11.1-5_all.deb cf5dec213586318e31f3c9250c9662bb 11176 science optional mpb_1.11.1-5_amd64.buildinfo f4665abe31c57e2b2b1d2331e2079236 270182 science optional mpb_1.11.1-5_amd64.deb /<>/mpb_1.11.1-5_amd64.changes.new could not be renamed to /<>/mpb_1.11.1-5_amd64.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: mpb Binary: mpb mpb-dbgsym mpb-dev mpb-doc mpb-mpi mpb-mpi-dbgsym mpb-scm Architecture: all amd64 Version: 1.11.1-5 Checksums-Md5: 12880973eb6b1201ab51fbaf4a6bb199 591964 mpb-dbgsym_1.11.1-5_amd64.ddeb 5184fcaea61d19594e89b3d487f24d28 8082 mpb-dev_1.11.1-5_amd64.deb 5c97a7513b985529ed9d95f2df410772 1125030 mpb-doc_1.11.1-5_all.deb e2785160ef0dd7779c79313df53c0c56 573062 mpb-mpi-dbgsym_1.11.1-5_amd64.ddeb d2482a999a1e959c09cb5ce98b260397 247484 mpb-mpi_1.11.1-5_amd64.deb 2799bec0ab92022daf23d395e0fa325a 12052 mpb-scm_1.11.1-5_all.deb f4665abe31c57e2b2b1d2331e2079236 270182 mpb_1.11.1-5_amd64.deb Checksums-Sha1: 18213770e9ace40355c13f3cdc681aee3744e1c8 591964 mpb-dbgsym_1.11.1-5_amd64.ddeb 24c9875a5528dffd0e424e0a0cf41d9ad67ddfaa 8082 mpb-dev_1.11.1-5_amd64.deb af0c03072b5b7c354e91377d51363bc99cc49244 1125030 mpb-doc_1.11.1-5_all.deb 4205b8ef09afe7641cd815d029a99429f76f03d5 573062 mpb-mpi-dbgsym_1.11.1-5_amd64.ddeb 19f2d23450e72d9705f82a3aaa8f37f374fc8af5 247484 mpb-mpi_1.11.1-5_amd64.deb 8b86bceed726710c199f10f659474b37b9358205 12052 mpb-scm_1.11.1-5_all.deb babc69fb9fc0ccee55d680bbc0770685a62b3dc1 270182 mpb_1.11.1-5_amd64.deb Checksums-Sha256: 9089c7b776f3ee735e9caab1fd9f61c7517b83577c95fe5dce30e6c3f046a641 591964 mpb-dbgsym_1.11.1-5_amd64.ddeb e9ca12f6e0799c0175a6e027fbcc8621523194d4ce2aacd8b30efc7c754277e5 8082 mpb-dev_1.11.1-5_amd64.deb 5e887ffdbbdcee4a8f80421c57363b25149570673d9523619573c6ded476db51 1125030 mpb-doc_1.11.1-5_all.deb 0a38c71dcaade981a3139a892e01c2a84c1835b6a66476c5bd8bc015ce6fd41c 573062 mpb-mpi-dbgsym_1.11.1-5_amd64.ddeb e824212c2c4b9ecdd71c02fb7130377d7faa714eecc467ba10ddd24e5256f5fc 247484 mpb-mpi_1.11.1-5_amd64.deb 5e9b10ebc4ed5b6cc54e3270d39c761d3d8e94dc076c3504b26651f0e28568cd 12052 mpb-scm_1.11.1-5_all.deb f9407524b20715eb2c64b84e38c841edc8b1976e45b7da3f0305cdf84aa481b6 270182 mpb_1.11.1-5_amd64.deb Build-Origin: Ubuntu Build-Architecture: amd64 Build-Date: Thu, 15 Dec 2022 05:24:19 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: adduser (= 3.129ubuntu1), autoconf (= 2.71-2), automake (= 1:1.16.5-1.3), autopoint (= 0.21-10), autotools-dev (= 20220109.1), base-files (= 12.3ubuntu1), base-passwd (= 3.6.1), bash (= 5.2-1ubuntu2), binutils (= 2.39.50.20221211-0ubuntu1), binutils-common (= 2.39.50.20221211-0ubuntu1), binutils-x86-64-linux-gnu (= 2.39.50.20221211-0ubuntu1), bsdextrautils (= 2.38.1-4ubuntu1), bsdutils (= 1:2.38.1-4ubuntu1), build-essential (= 12.9ubuntu3), bzip2 (= 1.0.8-5build1), coreutils (= 9.1-1ubuntu1), cpp (= 4:12.2.0-1ubuntu1), cpp-12 (= 12.2.0-10ubuntu1), dash (= 0.5.11+git20210903+057cd650a4ed-9ubuntu1), debconf (= 1.5.80), debhelper (= 13.10.1ubuntu1), debianutils (= 5.7-0.4), debugedit (= 1:5.0-5), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.0-2), diffstat (= 1.64-1build2), diffutils (= 1:3.8-1), dpkg (= 1.21.12ubuntu2), dpkg-dev (= 1.21.12ubuntu2), dwz (= 0.14+20220924-2), ed (= 1.18-1), file (= 1:5.41-4), findutils (= 4.9.0-3ubuntu1), g++ (= 4:12.2.0-1ubuntu1), g++-12 (= 12.2.0-10ubuntu1), gcc (= 4:12.2.0-1ubuntu1), gcc-12 (= 12.2.0-10ubuntu1), gcc-12-base (= 12.2.0-10ubuntu1), gettext (= 0.21-10), gettext-base (= 0.21-10), gfortran (= 4:12.2.0-1ubuntu1), gfortran-12 (= 12.2.0-10ubuntu1), grep (= 3.8-3), groff-base (= 1.22.4-9), guile-3.0 (= 3.0.8-2), guile-3.0-dev (= 3.0.8-2), guile-3.0-libs (= 3.0.8-2), gzip (= 1.12-1ubuntu1), hostname (= 3.23ubuntu2), ibverbs-providers (= 43.0-1), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-2), libaec-dev (= 1.0.6-1), libaec0 (= 1.0.6-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 12.2.0-10ubuntu1), libatomic1 (= 12.2.0-10ubuntu1), libattr1 (= 1:2.5.1-3), libaudit-common (= 1:3.0.7-1ubuntu2), libaudit1 (= 1:3.0.7-1ubuntu2), libbinutils (= 2.39.50.20221211-0ubuntu1), libblas-dev (= 3.11.0-2), libblas3 (= 3.11.0-2), libblkid1 (= 2.38.1-4ubuntu1), libbrotli1 (= 1.0.9-2build7), libbsd0 (= 0.11.7-1), libbz2-1.0 (= 1.0.8-5build1), libc-bin (= 2.36-0ubuntu4), libc-dev-bin (= 2.36-0ubuntu4), libc6 (= 2.36-0ubuntu4), libc6-dev (= 2.36-0ubuntu4), libcap-ng0 (= 0.8.3-1build1), libcap2 (= 1:2.66-1ubuntu1), libcbor0.8 (= 0.8.0-2ubuntu1), libcc1-0 (= 12.2.0-10ubuntu1), libcom-err2 (= 1.46.6~rc1-1ubuntu1), libcrypt-dev (= 1:4.4.33-1), libcrypt1 (= 1:4.4.33-1), libctf-nobfd0 (= 2.39.50.20221211-0ubuntu1), libctf0 (= 2.39.50.20221211-0ubuntu1), libctl-dev (= 4.5.1-2), libctl7 (= 4.5.1-2), libcurl4 (= 7.86.0-2), libcurl4-openssl-dev (= 7.86.0-2), libdb5.3 (= 5.3.28+dfsg1-0.10), libdebconfclient0 (= 0.264ubuntu1), libdebhelper-perl (= 13.10.1ubuntu1), libdpkg-perl (= 1.21.12ubuntu2), libdw1 (= 0.188-1), libedit2 (= 3.1-20221030-2), libelf1 (= 0.188-1), libevent-2.1-7a (= 2.1.12-stable-5ubuntu1), libevent-core-2.1-7a (= 2.1.12-stable-5ubuntu1), libevent-dev (= 2.1.12-stable-5ubuntu1), libevent-extra-2.1-7 (= 2.1.12-stable-5ubuntu1), libevent-openssl-2.1-7 (= 2.1.12-stable-5ubuntu1), libevent-pthreads-2.1-7 (= 2.1.12-stable-5ubuntu1), libfabric1 (= 1.11.0-3), libffi8 (= 3.4.4-1), libfftw3-bin (= 3.3.8-2ubuntu8), libfftw3-dev (= 3.3.8-2ubuntu8), libfftw3-double3 (= 3.3.8-2ubuntu8), libfftw3-long3 (= 3.3.8-2ubuntu8), libfftw3-mpi-dev (= 3.3.8-2ubuntu8), libfftw3-mpi3 (= 3.3.8-2ubuntu8), libfftw3-quad3 (= 3.3.8-2ubuntu8), libfftw3-single3 (= 3.3.8-2ubuntu8), libfido2-1 (= 1.12.0-2), libfile-stripnondeterminism-perl (= 1.13.0-2), libgc-dev (= 1:8.2.2-3), libgc1 (= 1:8.2.2-3), libgcc-12-dev (= 12.2.0-10ubuntu1), libgcc-s1 (= 12.2.0-10ubuntu1), libgcrypt20 (= 1.10.1-2ubuntu1), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgfortran-12-dev (= 12.2.0-10ubuntu1), libgfortran5 (= 12.2.0-10ubuntu1), libgmp-dev (= 2:6.2.1+dfsg1-1.1ubuntu1), libgmp10 (= 2:6.2.1+dfsg1-1.1ubuntu1), libgmpxx4ldbl (= 2:6.2.1+dfsg1-1.1ubuntu1), libgnutls30 (= 3.7.7-2ubuntu2), libgomp1 (= 12.2.0-10ubuntu1), libgpg-error0 (= 1.46-1), libgprofng0 (= 2.39.50.20221211-0ubuntu1), libgssapi-krb5-2 (= 1.20.1-1), libhdf5-mpi-dev (= 1.10.8+repack-1ubuntu1), libhdf5-openmpi-103-1 (= 1.10.8+repack-1ubuntu1), libhdf5-openmpi-cpp-103-1 (= 1.10.8+repack-1ubuntu1), libhdf5-openmpi-dev (= 1.10.8+repack-1ubuntu1), libhdf5-openmpi-fortran-102 (= 1.10.8+repack-1ubuntu1), libhdf5-openmpi-hl-100 (= 1.10.8+repack-1ubuntu1), libhdf5-openmpi-hl-cpp-100 (= 1.10.8+repack-1ubuntu1), libhdf5-openmpi-hl-fortran-100 (= 1.10.8+repack-1ubuntu1), libhogweed6 (= 3.8.1-2), libhwloc-dev (= 2.9.0-1), libhwloc-plugins (= 2.9.0-1), libhwloc15 (= 2.9.0-1), libibverbs-dev (= 43.0-1), libibverbs1 (= 43.0-1), libicu71 (= 71.1-3ubuntu1), libidn2-0 (= 2.3.3-1build1), libisl23 (= 0.25-1), libitm1 (= 12.2.0-10ubuntu1), libjansson4 (= 2.14-2), libjpeg-dev (= 8c-2ubuntu10), libjpeg-turbo8 (= 2.1.2-0ubuntu1), libjpeg-turbo8-dev (= 2.1.2-0ubuntu1), libjpeg8 (= 8c-2ubuntu10), libjpeg8-dev (= 8c-2ubuntu10), libjs-jquery (= 3.6.1+dfsg+~3.5.14-1), libjs-jquery-ui (= 1.13.2+dfsg-1), libk5crypto3 (= 1.20.1-1), libkeyutils1 (= 1.6.3-1), libkrb5-3 (= 1.20.1-1), libkrb5support0 (= 1.20.1-1), liblapack-dev (= 3.11.0-2), liblapack3 (= 3.11.0-2), libldap-2.5-0 (= 2.5.13+dfsg-1ubuntu1), liblsan0 (= 12.2.0-10ubuntu1), libltdl-dev (= 2.4.7-5), libltdl7 (= 2.4.7-5), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.2.10-0.0), libmagic-mgc (= 1:5.41-4), libmagic1 (= 1:5.41-4), libmd0 (= 1.0.4-2), libmount1 (= 2.38.1-4ubuntu1), libmpc3 (= 1.2.1-2build1), libmpfr6 (= 4.1.0-3build3), libmunge2 (= 0.5.14-6), libncurses-dev (= 6.3+20220423-2), libncurses5-dev (= 6.3+20220423-2), libncurses6 (= 6.3+20220423-2), libncursesw6 (= 6.3+20220423-2), libnettle8 (= 3.8.1-2), libnghttp2-14 (= 1.51.0-1), libnl-3-200 (= 3.7.0-0.2), libnl-3-dev (= 3.7.0-0.2), libnl-route-3-200 (= 3.7.0-0.2), libnl-route-3-dev (= 3.7.0-0.2), libnsl-dev (= 1.3.0-2build2), libnsl2 (= 1.3.0-2build2), libnuma-dev (= 2.0.15-1), libnuma1 (= 2.0.15-1), libopenmpi-dev (= 4.1.4-3ubuntu1), libopenmpi3 (= 4.1.4-3ubuntu1), libp11-kit0 (= 0.24.1-1ubuntu2), libpam-modules (= 1.5.2-5ubuntu1), libpam-modules-bin (= 1.5.2-5ubuntu1), libpam-runtime (= 1.5.2-5ubuntu1), libpam0g (= 1.5.2-5ubuntu1), libpciaccess0 (= 0.17-2), libpcre2-8-0 (= 10.40-1ubuntu1), libperl5.36 (= 5.36.0-6), libpipeline1 (= 1.5.7-1), libpkgconf3 (= 1.8.0-11), libpmix-dev (= 4.2.2-1), libpmix2 (= 4.2.2-1), libpsl5 (= 0.21.0-1.2build2), libpsm-infinipath1 (= 3.3+20.604758e7-6.2), libpsm2-2 (= 11.2.185-2), libquadmath0 (= 12.2.0-10ubuntu1), librdmacm1 (= 43.0-1), 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libx11-data (= 2:1.8.1-2), libxau6 (= 1:1.0.9-1build5), libxcb1 (= 1.15-1), libxdmcp6 (= 1:1.1.3-0ubuntu5), libxext6 (= 2:1.3.4-1build1), libxml2 (= 2.9.14+dfsg-1.1), libxnvctrl0 (= 510.47.03-0ubuntu1), libzstd1 (= 1.5.2+dfsg-1), linux-libc-dev (= 5.19.0-23.24), login (= 1:4.13+dfsg1-1ubuntu1), lto-disabled-list (= 36), m4 (= 1.4.19-1), make (= 4.3-4.1build1), man-db (= 2.11.1-1), mawk (= 1.3.4.20200120-3.1), mpi-default-dev (= 1.14), ncurses-base (= 6.3+20220423-2), ncurses-bin (= 6.3+20220423-2), ocl-icd-libopencl1 (= 2.3.1-1), openmpi-bin (= 4.1.4-3ubuntu1), openmpi-common (= 4.1.4-3ubuntu1), openssh-client (= 1:9.0p1-1ubuntu8), passwd (= 1:4.13+dfsg1-1ubuntu1), patch (= 2.7.6-7build2), perl (= 5.36.0-6), perl-base (= 5.36.0-6), perl-modules-5.36 (= 5.36.0-6), pkg-config (= 1.8.0-11), pkgconf (= 1.8.0-11), pkgconf-bin (= 1.8.0-11), po-debconf (= 1.0.21+nmu1), quilt (= 0.66-2.2), readline-common (= 8.2-1.2), rpcsvc-proto (= 1.4.2-0ubuntu6), sed (= 4.8-1ubuntu2), sensible-utils (= 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optional Homepage: https://mpb.readthedocs.io Description: MIT Photonic-Bands development files The MIT Photonic-Bands package is a free program for computing the band structures (dispersion relations) and electromagnetic modes of periodic dielectric structures, on both serial and parallel computers. It was developed by Steven G. Johnson at MIT in the Joannopoulos Ab Initio Physics group, and designed to study photonic crystal structures. . 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It was developed by Steven G. Johnson at MIT in the Joannopoulos Ab Initio Physics group, and designed to study photonic crystal structures. . 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drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 77 2022-12-14 21:17 ./usr/share/lintian/overrides/mpb-doc mpb-mpi_1.11.1-5_amd64.deb -------------------------- new Debian package, version 2.0. size 247484 bytes: control archive=1090 bytes. 1142 bytes, 23 lines control 533 bytes, 9 lines md5sums Package: mpb-mpi Source: mpb Version: 1.11.1-5 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Thorsten Alteholz Installed-Size: 958 Depends: guile-3.0-libs, libblas3 | libblas.so.3, libc6 (>= 2.34), libctl7 (>= 4.3.0), libfftw3-double3 (>= 3.3.5), libfftw3-mpi3, libhdf5-openmpi-103-1 (>= 1.8.14), liblapack3 | liblapack.so.3, libopenmpi3 (>= 4.1.4), mpi-default-bin, mpb-scm Recommends: h5utils Suggests: mpb-doc Section: science Priority: optional Homepage: https://mpb.readthedocs.io Description: MIT Photonic-Bands, parallel (mpich) version The MIT Photonic-Bands package is a free program for computing the band structures (dispersion relations) and electromagnetic modes of periodic dielectric structures, on both serial and parallel computers. It was developed by Steven G. Johnson at MIT in the Joannopoulos Ab Initio Physics group, and designed to study photonic crystal structures. . This package contains a parallel version of MPB, using the mpich implementation of the MPI protocol. It allows for calculations on clusters of computers. drwxr-xr-x root/root 0 2022-12-14 21:17 ./ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/bin/ -rwxr-xr-x root/root 301448 2022-12-14 21:17 ./usr/bin/mpb-mpi -rwxr-xr-x root/root 317832 2022-12-14 21:17 ./usr/bin/mpbi-mpi drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/lib/ -rw-r--r-- root/root 168406 2022-12-14 21:17 ./usr/lib/libmpb_mpi.a -rw-r--r-- root/root 882 2022-12-14 21:17 ./usr/lib/libmpb_mpi.la -rw-r--r-- root/root 174022 2022-12-14 21:17 ./usr/lib/libmpbi_mpi.a -rw-r--r-- root/root 885 2022-12-14 21:17 ./usr/lib/libmpbi_mpi.la drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/doc/mpb-mpi/ -rw-r--r-- root/root 720 2022-12-14 21:17 ./usr/share/doc/mpb-mpi/changelog.Debian.gz -rw-r--r-- root/root 1325 2022-12-14 21:17 ./usr/share/doc/mpb-mpi/copyright drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/man/ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/man/man1/ -rw-r--r-- root/root 881 2022-12-14 21:17 ./usr/share/man/man1/mpb-mpi.1.gz lrwxrwxrwx root/root 0 2022-12-14 21:17 ./usr/share/man/man1/mpbi-mpi.1.gz -> mpb-mpi.1.gz mpb-scm_1.11.1-5_all.deb ------------------------ new Debian package, version 2.0. size 12052 bytes: control archive=705 bytes. 751 bytes, 18 lines control 198 bytes, 3 lines md5sums Package: mpb-scm Source: mpb Version: 1.11.1-5 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Thorsten Alteholz Installed-Size: 48 Section: science Priority: optional Homepage: https://mpb.readthedocs.io Description: MIT Photonic-Bands initialisation files The MIT Photonic-Bands package is a free program for computing the band structures (dispersion relations) and electromagnetic modes of periodic dielectric structures, on both serial and parallel computers. It was developed by Steven G. Johnson at MIT in the Joannopoulos Ab Initio Physics group, and designed to study photonic crystal structures. . This package contains files for initialisation of MPB. drwxr-xr-x root/root 0 2022-12-14 21:17 ./ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/doc/mpb-scm/ -rw-r--r-- root/root 720 2022-12-14 21:17 ./usr/share/doc/mpb-scm/changelog.Debian.gz -rw-r--r-- root/root 1325 2022-12-14 21:17 ./usr/share/doc/mpb-scm/copyright drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/mpb/ -rw-r--r-- root/root 38540 2022-12-14 21:17 ./usr/share/mpb/mpb.scm mpb_1.11.1-5_amd64.deb ---------------------- new Debian package, version 2.0. size 270182 bytes: control archive=1194 bytes. 885 bytes, 18 lines control 1091 bytes, 19 lines md5sums Package: mpb Version: 1.11.1-5 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Thorsten Alteholz Installed-Size: 1040 Depends: guile-3.0-libs, libblas3 | libblas.so.3, libc6 (>= 2.34), libctl7 (>= 4.3.0), libfftw3-double3 (>= 3.3.5), libhdf5-openmpi-103-1 (>= 1.8.14), liblapack3 | liblapack.so.3, mpb-scm Recommends: h5utils Suggests: mpb-doc Section: science Priority: optional Homepage: https://mpb.readthedocs.io Description: MIT Photonic-Bands The MIT Photonic-Bands package is a free program for computing the band structures (dispersion relations) and electromagnetic modes of periodic dielectric structures, on both serial and parallel computers. It was developed by Steven G. Johnson at MIT in the Joannopoulos Ab Initio Physics group, and designed to study photonic crystal structures. drwxr-xr-x root/root 0 2022-12-14 21:17 ./ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/bin/ -rwxr-xr-x root/root 297272 2022-12-14 21:17 ./usr/bin/mpb -rwxr-xr-x root/root 43320 2022-12-14 21:17 ./usr/bin/mpb-data -rwxr-xr-x root/root 1073 2022-12-14 21:17 ./usr/bin/mpb-split -rwxr-xr-x root/root 305464 2022-12-14 21:17 ./usr/bin/mpbi -rwxr-xr-x root/root 43320 2022-12-14 21:17 ./usr/bin/mpbi-data -rwxr-xr-x root/root 1075 2022-12-14 21:17 ./usr/bin/mpbi-split drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/lib/ -rw-r--r-- root/root 162806 2022-12-14 21:17 ./usr/lib/libmpb.a -rw-r--r-- root/root 870 2022-12-14 21:17 ./usr/lib/libmpb.la -rw-r--r-- root/root 168246 2022-12-14 21:17 ./usr/lib/libmpbi.a -rw-r--r-- root/root 873 2022-12-14 21:17 ./usr/lib/libmpbi.la drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/doc/mpb/ -rw-r--r-- root/root 8106 2020-10-23 18:44 ./usr/share/doc/mpb/NEWS.md.gz -rw-r--r-- root/root 361 2020-10-23 18:44 ./usr/share/doc/mpb/TODO -rw-r--r-- root/root 717 2022-12-14 21:17 ./usr/share/doc/mpb/changelog.Debian.gz -rw-r--r-- root/root 1325 2022-12-14 21:17 ./usr/share/doc/mpb/copyright drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/man/ drwxr-xr-x root/root 0 2022-12-14 21:17 ./usr/share/man/man1/ -rw-r--r-- root/root 2595 2022-12-14 21:17 ./usr/share/man/man1/mpb-data.1.gz -rw-r--r-- root/root 1658 2022-12-14 21:17 ./usr/share/man/man1/mpb-split.1.gz -rw-r--r-- root/root 1768 2022-12-14 21:17 ./usr/share/man/man1/mpb.1.gz -rw-r--r-- root/root 2595 2022-12-14 21:17 ./usr/share/man/man1/mpbi-data.1.gz lrwxrwxrwx root/root 0 2022-12-14 21:17 ./usr/share/man/man1/mpbi-split.1.gz -> mpbi.1.gz -rw-r--r-- root/root 873 2022-12-14 21:17 ./usr/share/man/man1/mpbi.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: binary Build-Space: 40716 Build-Time: 71 Distribution: lunar-proposed Host Architecture: amd64 Install-Time: 10 Job: mpb_1.11.1-5.dsc Machine Architecture: amd64 Package: mpb Package-Time: 82 Source-Version: 1.11.1-5 Space: 40716 Status: successful Version: 1.11.1-5 -------------------------------------------------------------------------------- Finished at 2022-12-15T05:24:20Z Build needed 00:01:22, 40716k disk space Adding user buildd to group lxd RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=lunar --arch=amd64 PACKAGEBUILD-24939790 Scanning for processes to kill in build PACKAGEBUILD-24939790