https://launchpad.net/ubuntu/+source/mrtrix3/3.0~rc3+git135-g2b8e7d0c2-3/+build/16312507 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lcy01-amd64-010 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:40:15 UTC 2018 x86_64 Buildd toolchain package versions: launchpad-buildd_165 python-lpbuildd_165 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 23 Jan 11:12:50 ntpdate[1803]: adjust time server 10.211.37.1 offset -0.000340 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16312507 /home/buildd/filecache-default/020b0022f770b890c357907d03d82568c584d50e Creating target for build PACKAGEBUILD-16312507 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16312507 Starting target for build PACKAGEBUILD-16312507 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16312507 'deb http://ftpmaster.internal/ubuntu disco main universe' 'deb http://ftpmaster.internal/ubuntu disco-security main universe' 'deb http://ftpmaster.internal/ubuntu disco-updates main universe' 'deb http://ftpmaster.internal/ubuntu disco-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-16312507 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16312507 Updating target for build PACKAGEBUILD-16312507 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 Packages [1010 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [512 kB] Get:7 http://ftpmaster.internal/ubuntu disco/universe amd64 Packages [9018 kB] Get:8 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5215 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 Packages [148 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [61.5 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 Packages [535 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [290 kB] Fetched 17.3 MB in 3s (5900 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libreadline7 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: libreadline8 The following packages will be upgraded: apt bash binutils binutils-common binutils-x86-64-linux-gnu bsdutils coreutils cpp-8 dash debconf debianutils dpkg dpkg-dev e2fslibs e2fsprogs fdisk findutils g++-8 gcc-8 gcc-8-base gpg gpg-agent gpgconf gpgv grep gzip init init-system-helpers libapt-pkg5.0 libargon2-1 libasan5 libassuan0 libatomic1 libbinutils libblkid1 libcap-ng0 libcc1-0 libcom-err2 libcomerr2 libdpkg-perl libext2fs2 libfdisk1 libgcc-8-dev libgcc1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libitm1 libjson-c3 liblsan0 liblz4-1 libmount1 libmpfr6 libmpx2 libpng16-16 libquadmath0 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libss2 libstdc++-8-dev libstdc++6 libsystemd0 libtsan0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev mount readline-common sed systemd systemd-sysv tar tzdata 79 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 48.4 MB of archives. After this operation, 2172 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main amd64 debianutils amd64 4.8.6.1 [85.5 kB] Get:2 http://ftpmaster.internal/ubuntu disco/main amd64 bash amd64 5.0-1ubuntu1 [643 kB] Get:3 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 bsdutils amd64 1:2.33.1-0.1ubuntu1 [63.6 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 coreutils amd64 8.30-1ubuntu1 [1243 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 tar amd64 1.30+dfsg-4 [242 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main amd64 dpkg amd64 1.19.2ubuntu2 [1101 kB] Get:7 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 debconf all 1.5.70 [122 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main amd64 dash amd64 0.5.10.2-4ubuntu1 [85.8 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main amd64 findutils amd64 4.6.0+git+20190105-2 [329 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main amd64 grep amd64 3.3-1 [149 kB] Get:11 http://ftpmaster.internal/ubuntu disco/main amd64 gzip amd64 1.9-3 [93.8 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main amd64 sed amd64 4.7-1 [190 kB] Get:13 http://ftpmaster.internal/ubuntu disco/main amd64 init-system-helpers all 1.56+nmu1 [38.2 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main amd64 libgnutls30 amd64 3.6.5-2ubuntu1 [759 kB] Get:15 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libubsan1 amd64 8.2.0-14ubuntu1 [121 kB] Get:16 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libtsan0 amd64 8.2.0-14ubuntu1 [288 kB] Get:17 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gcc-8-base amd64 8.2.0-14ubuntu1 [18.6 kB] Get:18 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgcc1 amd64 1:8.2.0-14ubuntu1 [40.8 kB] Get:19 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgomp1 amd64 8.2.0-14ubuntu1 [76.4 kB] Get:20 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libitm1 amd64 8.2.0-14ubuntu1 [28.1 kB] Get:21 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libatomic1 amd64 8.2.0-14ubuntu1 [9056 B] Get:22 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libasan5 amd64 8.2.0-14ubuntu1 [364 kB] Get:23 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 liblsan0 amd64 8.2.0-14ubuntu1 [132 kB] Get:24 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libmpx2 amd64 8.2.0-14ubuntu1 [11.7 kB] Get:25 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libquadmath0 amd64 8.2.0-14ubuntu1 [134 kB] Get:26 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 cpp-8 amd64 8.2.0-14ubuntu1 [7225 kB] Get:27 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libcc1-0 amd64 8.2.0-14ubuntu1 [39.4 kB] Get:28 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 g++-8 amd64 8.2.0-14ubuntu1 [8116 kB] Get:29 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gcc-8 amd64 8.2.0-14ubuntu1 [8008 kB] Get:30 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgcc-8-dev amd64 8.2.0-14ubuntu1 [2303 kB] Get:31 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libstdc++-8-dev amd64 8.2.0-14ubuntu1 [1539 kB] Get:32 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libstdc++6 amd64 8.2.0-14ubuntu1 [398 kB] Get:33 http://ftpmaster.internal/ubuntu disco/main amd64 libmpfr6 amd64 4.0.2~rc1-1 [240 kB] Get:34 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libbinutils amd64 2.31.1-11ubuntu1 [484 kB] Get:35 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 binutils-common amd64 2.31.1-11ubuntu1 [194 kB] Get:36 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 binutils amd64 2.31.1-11ubuntu1 [3396 B] Get:37 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 binutils-x86-64-linux-gnu amd64 2.31.1-11ubuntu1 [1829 kB] Get:38 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 liblz4-1 amd64 1.8.3-1ubuntu1 [71.7 kB] Get:39 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libudev1 amd64 240-4ubuntu1 [71.0 kB] Get:40 http://ftpmaster.internal/ubuntu disco/main amd64 libzstd1 amd64 1.3.8+dfsg-3 [226 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main amd64 libapt-pkg5.0 amd64 1.8.0~alpha3.1 [817 kB] Get:42 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgpg-error0 amd64 1.33-3 [57.4 kB] Get:43 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpgv amd64 2.2.12-1ubuntu2 [198 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main amd64 apt amd64 1.8.0~alpha3.1 [1164 kB] Get:45 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 systemd-sysv amd64 240-4ubuntu1 [9376 B] Get:46 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libuuid1 amd64 2.33.1-0.1ubuntu1 [20.9 kB] Get:47 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libblkid1 amd64 2.33.1-0.1ubuntu1 [133 kB] Get:48 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libmount1 amd64 2.33.1-0.1ubuntu1 [146 kB] Get:49 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsmartcols1 amd64 2.33.1-0.1ubuntu1 [92.2 kB] Get:50 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 mount amd64 2.33.1-0.1ubuntu1 [113 kB] Get:51 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 systemd amd64 240-4ubuntu1 [3327 kB] Get:52 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsystemd0 amd64 240-4ubuntu1 [250 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main amd64 libext2fs2 amd64 1.44.5-1 [159 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main amd64 e2fsprogs amd64 1.44.5-1 [514 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main amd64 init amd64 1.56+nmu1 [6080 B] Get:56 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libfdisk1 amd64 2.33.1-0.1ubuntu1 [173 kB] Get:57 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 fdisk amd64 2.33.1-0.1ubuntu1 [118 kB] Get:58 http://ftpmaster.internal/ubuntu disco/main amd64 libcap-ng0 amd64 0.7.9-2 [11.0 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage-common all 2.8-2 [7016 B] Get:60 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage1 amd64 2.8-2 [85.2 kB] Get:61 http://ftpmaster.internal/ubuntu disco/main amd64 libcom-err2 amd64 1.44.5-1 [9372 B] Get:62 http://ftpmaster.internal/ubuntu disco/main amd64 libss2 amd64 1.44.5-1 [11.1 kB] Get:63 http://ftpmaster.internal/ubuntu disco/main amd64 libargon2-1 amd64 0~20171227-0.2 [19.2 kB] Get:64 http://ftpmaster.internal/ubuntu disco/main amd64 libjson-c3 amd64 0.12.1+ds-2 [22.2 kB] Get:65 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 readline-common all 8.0-1 [53.4 kB] Get:66 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libreadline8 amd64 8.0-1 [130 kB] Get:67 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsqlite3-0 amd64 3.26.0+fossilbc891ac6b-1build1 [530 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main amd64 tzdata all 2018i-1 [189 kB] Get:69 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgdbm6 amd64 1.18.1-2build1 [27.6 kB] Get:70 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpng16-16 amd64 1.6.36-3 [179 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main amd64 dpkg-dev all 1.19.2ubuntu2 [549 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main amd64 libdpkg-perl all 1.19.2ubuntu2 [227 kB] Get:73 http://ftpmaster.internal/ubuntu disco/main amd64 e2fslibs amd64 1.44.5-1 [2704 B] Get:74 http://ftpmaster.internal/ubuntu disco/main amd64 libassuan0 amd64 2.5.2-1 [35.1 kB] Get:75 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpg amd64 2.2.12-1ubuntu2 [475 kB] Get:76 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpgconf amd64 2.2.12-1ubuntu2 [123 kB] Get:77 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gpg-agent amd64 2.2.12-1ubuntu2 [230 kB] Get:78 http://ftpmaster.internal/ubuntu disco/main amd64 libcomerr2 amd64 1.44.5-1 [2700 B] Get:79 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgdbm-compat4 amd64 1.18.1-2build1 [6168 B] Get:80 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 linux-libc-dev amd64 4.19.0-11.12 [1065 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 48.4 MB in 2s (19.8 MB/s) (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../debianutils_4.8.6.1_amd64.deb ... Unpacking debianutils (4.8.6.1) over (4.8.6) ... Setting up debianutils (4.8.6.1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../bash_5.0-1ubuntu1_amd64.deb ... Unpacking bash (5.0-1ubuntu1) over (4.4.18-2ubuntu3) ... Setting up bash (5.0-1ubuntu1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.33.1-0.1ubuntu1_amd64.deb ... Unpacking bsdutils (1:2.33.1-0.1ubuntu1) over (1:2.32-0.1ubuntu2) ... Setting up bsdutils (1:2.33.1-0.1ubuntu1) ... (Reading database ... 12665 files and directories currently installed.) Preparing to unpack .../coreutils_8.30-1ubuntu1_amd64.deb ... Unpacking coreutils (8.30-1ubuntu1) over (8.28-1ubuntu2) ... Setting up coreutils (8.30-1ubuntu1) ... 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Setting up libbinutils:amd64 (2.31.1-11ubuntu1) ... Setting up gpgconf (2.2.12-1ubuntu2) ... Setting up gpg-agent (2.2.12-1ubuntu2) ... Setting up libgcc-8-dev:amd64 (8.2.0-14ubuntu1) ... Setting up gpg (2.2.12-1ubuntu2) ... Setting up binutils-x86-64-linux-gnu (2.31.1-11ubuntu1) ... Setting up libstdc++-8-dev:amd64 (8.2.0-14ubuntu1) ... Setting up binutils (2.31.1-11ubuntu1) ... Setting up gcc-8 (8.2.0-14ubuntu1) ... Setting up g++-8 (8.2.0-14ubuntu1) ... Setting up dpkg-dev (1.19.2ubuntu2) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-16312507 amd64 disco-proposed -c chroot:build-PACKAGEBUILD-16312507 --arch=amd64 --dist=disco-proposed --nolog -A 'mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3.dsc' Initiating build PACKAGEBUILD-16312507 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-141-generic #167-Ubuntu SMP Wed Dec 5 10:40:15 UTC 2018 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lcy01-amd64-010.buildd +==============================================================================+ | mrtrix3 3.0~rc3+git135-g2b8e7d0c2-3 (amd64) 23 Jan 2019 11:13 | +==============================================================================+ Package: mrtrix3 Version: 3.0~rc3+git135-g2b8e7d0c2-3 Source Version: 3.0~rc3+git135-g2b8e7d0c2-3 Distribution: disco-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/mrtrix3-FxaeIL/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' with '<>' I: NOTICE: Log filtering will replace 'build/mrtrix3-FxaeIL' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-16312507/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-57cZIE/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-57cZIE/apt_archive ./ InRelease Get:2 copy:/<>/resolver-57cZIE/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-57cZIE/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-57cZIE/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-57cZIE/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (268 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 1 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-57cZIE/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12700 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 9~), liboctave-dev, libgsl-dev | libgsl0-dev, libeigen3-dev, libqt4-opengl-dev, python, pkg-config, libgtkmm-2.4-dev, libgtkglext1-dev, imagemagick, matlab-support-dev, bc Filtered Build-Depends: debhelper (>= 9~), liboctave-dev, libgsl-dev | libgsl0-dev, libeigen3-dev, libqt4-opengl-dev, python, pkg-config, libgtkmm-2.4-dev, libgtkglext1-dev, imagemagick, matlab-support-dev, bc dpkg-deb: building package 'sbuild-build-depends-mrtrix3-dummy' in '/<>/resolver-cefWUX/apt_archive/sbuild-build-depends-mrtrix3-dummy.deb'. Ign:1 copy:/<>/resolver-cefWUX/apt_archive ./ InRelease Get:2 copy:/<>/resolver-cefWUX/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-cefWUX/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-cefWUX/apt_archive ./ Sources [300 B] Get:5 copy:/<>/resolver-cefWUX/apt_archive ./ Packages [623 B] Fetched 3042 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install mrtrix3 build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following additional packages will be installed: adwaita-icon-theme autoconf automake autopoint autotools-dev bc bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-8 gir1.2-atk-1.0 gir1.2-freedesktop gir1.2-gdkpixbuf-2.0 gir1.2-glib-2.0 gir1.2-gtk-2.0 gir1.2-harfbuzz-0.0 gir1.2-pango-1.0 groff-base gtk-update-icon-cache hdf5-helpers hicolor-icon-theme humanity-icon-theme icu-devtools imagemagick imagemagick-6-common imagemagick-6.q16 intltool-debian libaec-dev libaec0 libamd2 libarchive-zip-perl libarpack2 libasn1-8-heimdal libasound2 libasound2-data libatk1.0-0 libatk1.0-data libatk1.0-dev libatkmm-1.6-1v5 libatkmm-1.6-dev libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libblas-dev libblas3 libbsd0 libcairo-gobject2 libcairo-script-interpreter2 libcairo2 libcairo2-dev libcairomm-1.0-1v5 libcairomm-1.0-dev libcamd2 libccolamd2 libcholmod3 libcolamd2 libcroco3 libcups2 libcurl3-gnutls libcxsparse3 libdatrie1 libdbus-1-3 libdouble-conversion1 libdrm-amdgpu1 libdrm-common libdrm-dev libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl-mesa0 libegl1 libeigen3-dev libelf1 libevdev2 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libflac8 libfltk-gl1.3 libfltk1.3 libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libfribidi-dev libfribidi0 libgbm1 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-bin libgdk-pixbuf2.0-common libgdk-pixbuf2.0-dev libgfortran-8-dev libgfortran5 libgirepository-1.0-1 libgl1 libgl1-mesa-dev libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libgles1 libgles2 libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libglibmm-2.4-1v5 libglibmm-2.4-dev libglpk40 libglu1-mesa libglu1-mesa-dev libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0 libglx0 libgraphicsmagick++-q16-12 libgraphicsmagick-q16-3 libgraphite2-3 libgraphite2-dev libgsl-dev libgsl23 libgslcblas0 libgssapi-krb5-2 libgssapi3-heimdal libgtk2.0-0 libgtk2.0-common libgtk2.0-dev libgtkglext1 libgtkglext1-dev libgtkmm-2.4-1v5 libgtkmm-2.4-dev libgudev-1.0-0 libharfbuzz-dev libharfbuzz-gobject0 libharfbuzz-icu0 libharfbuzz0b libhcrypto4-heimdal libhdf5-103 libhdf5-cpp-103 libhdf5-dev libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice-dev libice6 libicu-dev libicu63 libinput-bin libinput10 libjack-jackd2-0 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2 libldap-common libllvm7 liblqr-1-0 libltdl7 liblzo2-2 libmagic-mgc libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmetis5 libmng2 libmpdec2 libmtdev1 libncurses-dev libnghttp2-14 liboctave-dev liboctave6 libogg0 libopengl0 libpango-1.0-0 libpango1.0-dev libpangocairo-1.0-0 libpangoft2-1.0-0 libpangomm-1.4-1v5 libpangomm-1.4-dev libpangox-1.0-0 libpangox-1.0-dev libpangoxft-1.0-0 libpciaccess0 libpcre16-3 libpcre2-16-0 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpixman-1-dev libpng-dev libportaudio2 libpsl5 libpthread-stubs0-dev libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libqhull7 libqrupdate1 libqscintilla2-qt5-13 libqscintilla2-qt5-l10n libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-opengl libqt4-opengl-dev libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqt5core5a libqt5dbus5 libqt5gui5 libqt5help5 libqt5network5 libqt5printsupport5 libqt5sql5 libqt5widgets5 libqtcore4 libqtdbus4 libqtgui4 libreadline-dev libroken18-heimdal librsvg2-2 librsvg2-common librtmp1 libsamplerate0 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigc++-2.0-0v5 libsigc++-2.0-dev libsigsegv2 libsm-dev libsm6 libsndfile1 libsuitesparseconfig5 libsz2 libtext-unidecode-perl libthai-data libthai0 libtiff5 libtool libuchardet0 libumfpack5 libvorbis0a libvorbisenc2 libwacom-common libwacom2 libwayland-client0 libwayland-server0 libwebp6 libwebpmux3 libwind0-heimdal libwmf0.2-7 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render-util0 libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0 libxcb-shm0-dev libxcb-sync-dev libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb-xinerama0 libxcb-xkb1 libxcb1 libxcb1-dev libxcomposite-dev libxcomposite1 libxcursor-dev libxcursor1 libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev libxft2 libxi-dev libxi6 libxinerama-dev libxinerama1 libxkbcommon-x11-0 libxkbcommon0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml2 libxml2-utils libxmu-dev libxmu-headers libxmu6 libxrandr-dev libxrandr2 libxrender-dev libxrender1 libxshmfence-dev libxshmfence1 libxt-dev libxt6 libxxf86vm-dev libxxf86vm1 m4 man-db matlab-support-dev mesa-common-dev mime-support octave octave-common pango1.0-tools pkg-config po-debconf python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal python3.7 python3.7-minimal qdbus qt4-linguist-tools qt4-qmake qtchooser qtcore4-l10n shared-mime-info tex-common texinfo ubuntu-mono ucf uuid-dev x11-common x11proto-composite-dev x11proto-core-dev x11proto-damage-dev x11proto-dev x11proto-fixes-dev x11proto-input-dev x11proto-randr-dev x11proto-xext-dev x11proto-xf86vidmode-dev x11proto-xinerama-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-8-multilib gfortran-8-doc libgfortran5-dbg libcoarrays-dev groff imagemagick-doc autotrace cups-bsd | lpr | lprng curl enscript ffmpeg gimp gnuplot grads graphviz hp2xx html2ps libwmf-bin mplayer povray radiance sane-utils texlive-base-bin transfig ufraw-batch xdg-utils libasound2-plugins alsa-utils libatkmm-1.6-doc nas liblapack-doc libcairo2-doc libcairomm-1.0-doc cups-common libeigen3-doc libmpfrc++-dev libfftw3-doc libglib2.0-doc libglibmm-2.4-doc libgtkmm-3.0-dev libiodbc2-dev default-libmysqlclient-dev graphicsmagick-dbg libgraphite2-utils gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html krb5-doc krb5-user gvfs libgtk2.0-doc libgtkmm-2.4-doc libhdf5-doc libice-doc icu-doc jackd2 liblcms2-utils libmagickcore-6.q16-6-extra ncurses-doc libpango1.0-doc pciutils libqscintilla2-doc libqt4-declarative-folderlistmodel libqt4-declarative-gestures libqt4-declarative-particles libqt4-declarative-shaders qt4-qmlviewer firebird-dev libmysqlclient-dev libpq-dev libsqlite0-dev libsqlite3-dev qt4-dev-tools qt4-doc unixodbc-dev qt5-image-formats-plugins qtwayland5 libicu55 qt4-qtconfig readline-doc librsvg2-bin lm-sensors libsigc++-2.0-doc libsm-doc libtool-doc gcj-jdk libwmf0.2-7-gtk libx11-doc libxcb-doc libxext-doc libxt-doc m4-doc apparmor less www-browser libmail-box-perl python-doc python-tk python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python3.7-venv python3.7-doc texlive-base texlive-latex-base texlive-generic-recommended texinfo-doc-nonfree texlive-fonts-recommended Recommended packages: curl | wget | lynx libmagickcore-6.q16-6-extra ghostscript netpbm dbus libarchive-cpio-perl freetype2-doc xdg-user-dirs gsfonts libgail-common libgtk2.0-bin krb5-locales libpng-tools publicsuffix libqt4-sql-mysql | libqt4-sql-odbc | libqt4-sql-psql | libqt4-sql-sqlite qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme libqt5sql5-sqlite | libqt5sql5-mysql | libqt5sql5-odbc | libqt5sql5-psql | libqt5sql5-tds | libqt5sql5-ibase qt-at-spi libsasl2-modules libltdl-dev libwacom-bin libwww-perl libxml-sax-expat-perl gnuplot-qt | gnuplot-x11 | gnuplot-nox libopenblas-base | libatlas3-base pstoedit epstool default-jre-headless octave-doc fonts-freefont-otf libmail-sendmail-perl The following NEW packages will be installed: adwaita-icon-theme autoconf automake autopoint autotools-dev bc bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-8 gir1.2-atk-1.0 gir1.2-freedesktop gir1.2-gdkpixbuf-2.0 gir1.2-glib-2.0 gir1.2-gtk-2.0 gir1.2-harfbuzz-0.0 gir1.2-pango-1.0 groff-base gtk-update-icon-cache hdf5-helpers hicolor-icon-theme humanity-icon-theme icu-devtools imagemagick imagemagick-6-common imagemagick-6.q16 intltool-debian libaec-dev libaec0 libamd2 libarchive-zip-perl libarpack2 libasn1-8-heimdal libasound2 libasound2-data libatk1.0-0 libatk1.0-data libatk1.0-dev libatkmm-1.6-1v5 libatkmm-1.6-dev libaudio2 libavahi-client3 libavahi-common-data libavahi-common3 libblas-dev libblas3 libbsd0 libcairo-gobject2 libcairo-script-interpreter2 libcairo2 libcairo2-dev libcairomm-1.0-1v5 libcairomm-1.0-dev libcamd2 libccolamd2 libcholmod3 libcolamd2 libcroco3 libcups2 libcurl3-gnutls libcxsparse3 libdatrie1 libdbus-1-3 libdouble-conversion1 libdrm-amdgpu1 libdrm-common libdrm-dev libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libegl-mesa0 libegl1 libeigen3-dev libelf1 libevdev2 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libflac8 libfltk-gl1.3 libfltk1.3 libfontconfig1 libfontconfig1-dev libfreetype6 libfreetype6-dev libfribidi-dev libfribidi0 libgbm1 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-bin libgdk-pixbuf2.0-common libgdk-pixbuf2.0-dev libgfortran-8-dev libgfortran5 libgirepository-1.0-1 libgl1 libgl1-mesa-dev libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libgles1 libgles2 libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libglibmm-2.4-1v5 libglibmm-2.4-dev libglpk40 libglu1-mesa libglu1-mesa-dev libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0 libglx0 libgraphicsmagick++-q16-12 libgraphicsmagick-q16-3 libgraphite2-3 libgraphite2-dev libgsl-dev libgsl23 libgslcblas0 libgssapi-krb5-2 libgssapi3-heimdal libgtk2.0-0 libgtk2.0-common libgtk2.0-dev libgtkglext1 libgtkglext1-dev libgtkmm-2.4-1v5 libgtkmm-2.4-dev libgudev-1.0-0 libharfbuzz-dev libharfbuzz-gobject0 libharfbuzz-icu0 libharfbuzz0b libhcrypto4-heimdal libhdf5-103 libhdf5-cpp-103 libhdf5-dev libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice-dev libice6 libicu-dev libicu63 libinput-bin libinput10 libjack-jackd2-0 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2 libldap-common libllvm7 liblqr-1-0 libltdl7 liblzo2-2 libmagic-mgc libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmetis5 libmng2 libmpdec2 libmtdev1 libncurses-dev libnghttp2-14 liboctave-dev liboctave6 libogg0 libopengl0 libpango-1.0-0 libpango1.0-dev libpangocairo-1.0-0 libpangoft2-1.0-0 libpangomm-1.4-1v5 libpangomm-1.4-dev libpangox-1.0-0 libpangox-1.0-dev libpangoxft-1.0-0 libpciaccess0 libpcre16-3 libpcre2-16-0 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpixman-1-dev libpng-dev libportaudio2 libpsl5 libpthread-stubs0-dev libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libqhull7 libqrupdate1 libqscintilla2-qt5-13 libqscintilla2-qt5-l10n libqt4-dbus libqt4-declarative libqt4-designer libqt4-dev libqt4-dev-bin libqt4-help libqt4-network libqt4-opengl libqt4-opengl-dev libqt4-qt3support libqt4-script libqt4-scripttools libqt4-sql libqt4-svg libqt4-test libqt4-xml libqt4-xmlpatterns libqt5core5a libqt5dbus5 libqt5gui5 libqt5help5 libqt5network5 libqt5printsupport5 libqt5sql5 libqt5widgets5 libqtcore4 libqtdbus4 libqtgui4 libreadline-dev libroken18-heimdal librsvg2-2 librsvg2-common librtmp1 libsamplerate0 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigc++-2.0-0v5 libsigc++-2.0-dev libsigsegv2 libsm-dev libsm6 libsndfile1 libsuitesparseconfig5 libsz2 libtext-unidecode-perl libthai-data libthai0 libtiff5 libtool libuchardet0 libumfpack5 libvorbis0a libvorbisenc2 libwacom-common libwacom2 libwayland-client0 libwayland-server0 libwebp6 libwebpmux3 libwind0-heimdal libwmf0.2-7 libx11-6 libx11-data libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render-util0 libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev libxcb-shm0 libxcb-shm0-dev libxcb-sync-dev libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xfixes0-dev libxcb-xinerama0 libxcb-xkb1 libxcb1 libxcb1-dev libxcomposite-dev libxcomposite1 libxcursor-dev libxcursor1 libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev libxft2 libxi-dev libxi6 libxinerama-dev libxinerama1 libxkbcommon-x11-0 libxkbcommon0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml2 libxml2-utils libxmu-dev libxmu-headers libxmu6 libxrandr-dev libxrandr2 libxrender-dev libxrender1 libxshmfence-dev libxshmfence1 libxt-dev libxt6 libxxf86vm-dev libxxf86vm1 m4 man-db matlab-support-dev mesa-common-dev mime-support octave octave-common pango1.0-tools pkg-config po-debconf python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal python3.7 python3.7-minimal qdbus qt4-linguist-tools qt4-qmake qtchooser qtcore4-l10n sbuild-build-depends-mrtrix3-dummy shared-mime-info tex-common texinfo ubuntu-mono ucf uuid-dev x11-common x11proto-composite-dev x11proto-core-dev x11proto-damage-dev x11proto-dev x11proto-fixes-dev x11proto-input-dev x11proto-randr-dev x11proto-xext-dev x11proto-xf86vidmode-dev x11proto-xinerama-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 423 newly installed, 0 to remove and 1 not upgraded. Need to get 168 MB of archives. After this operation, 887 MB of additional disk space will be used. 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libpython3-stdlib amd64 3.7.2-1 [7024 B] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3 amd64 3.7.2-1 [47.2 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main amd64 libxau6 amd64 1:1.0.8-1 [8376 B] Get:13 http://ftpmaster.internal/ubuntu disco/main amd64 libbsd0 amd64 0.9.1-1 [44.6 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main amd64 libxdmcp6 amd64 1:1.1.2-3 [10.7 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb1 amd64 1.13.1-2 [45.2 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main amd64 libx11-data all 2:1.6.7-1 [113 kB] Get:17 http://ftpmaster.internal/ubuntu disco/main amd64 libx11-6 amd64 2:1.6.7-1 [572 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main amd64 libxext6 amd64 2:1.3.3-1 [29.4 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main amd64 bsdmainutils amd64 11.1.2ubuntu2 [181 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:21 http://ftpmaster.internal/ubuntu disco/main amd64 groff-base amd64 1.22.4-2 [862 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main amd64 libpipeline1 amd64 1.5.0-2 [25.7 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main amd64 man-db amd64 2.8.5-1 [1102 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-double3 amd64 3.3.8-2 [727 kB] Get:25 http://ftpmaster.internal/ubuntu disco/main amd64 libfreetype6 amd64 2.9.1-3 [335 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main amd64 ucf all 3.0038+nmu1 [51.6 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main amd64 fonts-dejavu-core all 2.37-1 [1041 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main amd64 fontconfig-config all 2.13.0-5ubuntu3 [28.4 kB] Get:29 http://ftpmaster.internal/ubuntu disco/main amd64 libfontconfig1 amd64 2.13.0-5ubuntu3 [112 kB] Get:30 http://ftpmaster.internal/ubuntu disco/main amd64 libjbig0 amd64 2.1-3.1build1 [26.7 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main amd64 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http://ftpmaster.internal/ubuntu disco/main amd64 fontconfig amd64 2.13.0-5ubuntu3 [170 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main amd64 libfribidi0 amd64 1.0.5-3.1 [26.2 kB] Get:63 http://ftpmaster.internal/ubuntu disco/main amd64 libthai-data all 0.1.28-1 [134 kB] Get:64 http://ftpmaster.internal/ubuntu disco/main amd64 libdatrie1 amd64 0.2.12-1 [18.3 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main amd64 libthai0 amd64 0.1.28-1 [18.0 kB] Get:66 http://ftpmaster.internal/ubuntu disco/main amd64 libpango-1.0-0 amd64 1.42.4-6 [155 kB] Get:67 http://ftpmaster.internal/ubuntu disco/universe amd64 libpangox-1.0-0 amd64 0.0.2-5 [41.7 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-keysyms1 amd64 0.4.0-1 [8406 B] Get:69 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-render0 amd64 1.13.1-2 [14.8 kB] Get:70 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-render-util0 amd64 0.3.9-1 [9638 B] Get:71 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libmagic-mgc amd64 1:5.35-2 [200 kB] Get:72 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libmagic1 amd64 1:5.35-2 [73.4 kB] Get:73 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 file amd64 1:5.35-2 [22.9 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main amd64 libgirepository-1.0-1 amd64 1.58.3-2 [82.4 kB] Get:75 http://ftpmaster.internal/ubuntu disco/main amd64 gir1.2-glib-2.0 amd64 1.58.3-2 [132 kB] Get:76 http://ftpmaster.internal/ubuntu disco/main amd64 libdbus-1-3 amd64 1.12.10-1ubuntu2 [177 kB] Get:77 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libelf1 amd64 0.175-2 [44.2 kB] Get:78 http://ftpmaster.internal/ubuntu disco/main amd64 libglib2.0-data all 2.58.1-2 [5476 B] Get:79 http://ftpmaster.internal/ubuntu disco/main amd64 shared-mime-info amd64 1.10-1 [428 kB] Get:80 http://ftpmaster.internal/ubuntu disco/main amd64 xkb-data all 2.23.1-1ubuntu1.18.10.1 [325 kB] Get:81 http://ftpmaster.internal/ubuntu disco/main amd64 gettext-base amd64 0.19.8.1-9 [50.1 kB] Get:82 http://ftpmaster.internal/ubuntu disco/main amd64 libdrm-common all 2.4.95-1 [5000 B] Get:83 http://ftpmaster.internal/ubuntu disco/main amd64 libdrm2 amd64 2.4.95-1 [30.6 kB] Get:84 http://ftpmaster.internal/ubuntu disco/main amd64 libedit2 amd64 3.1-20181209-1 [85.9 kB] Get:85 http://ftpmaster.internal/ubuntu disco/main amd64 libkrb5support0 amd64 1.17-1 [33.3 kB] Get:86 http://ftpmaster.internal/ubuntu disco/main amd64 libk5crypto3 amd64 1.17-1 [85.8 kB] Get:87 http://ftpmaster.internal/ubuntu disco/main amd64 libkeyutils1 amd64 1.5.9-9.3 [9640 B] Get:88 http://ftpmaster.internal/ubuntu disco/main amd64 libkrb5-3 amd64 1.17-1 [329 kB] Get:89 http://ftpmaster.internal/ubuntu disco/main amd64 libgssapi-krb5-2 amd64 1.17-1 [123 kB] Get:90 http://ftpmaster.internal/ubuntu disco/main amd64 libpsl5 amd64 0.20.2-2 [50.0 kB] Get:91 http://ftpmaster.internal/ubuntu disco/main amd64 hicolor-icon-theme all 0.17-2 [9976 B] Get:92 http://ftpmaster.internal/ubuntu disco/main amd64 libgdk-pixbuf2.0-common all 2.38.0+dfsg-7 [6080 B] Get:93 http://ftpmaster.internal/ubuntu disco/main amd64 libgdk-pixbuf2.0-0 amd64 2.38.0+dfsg-7 [170 kB] Get:94 http://ftpmaster.internal/ubuntu disco/main amd64 gtk-update-icon-cache amd64 3.24.4-1ubuntu1 [27.0 kB] Get:95 http://ftpmaster.internal/ubuntu disco/main amd64 libpixman-1-0 amd64 0.36.0-1 [229 kB] Get:96 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-shm0 amd64 1.13.1-2 [5548 B] Get:97 http://ftpmaster.internal/ubuntu disco/main amd64 libxrender1 amd64 1:0.9.10-1 [18.7 kB] Get:98 http://ftpmaster.internal/ubuntu disco/main amd64 libcairo2 amd64 1.16.0-2 [585 kB] Get:99 http://ftpmaster.internal/ubuntu disco/main amd64 libcroco3 amd64 0.6.12-3 [81.4 kB] Get:100 http://ftpmaster.internal/ubuntu disco/main amd64 libgraphite2-3 amd64 1.3.13-7 [73.2 kB] Get:101 http://ftpmaster.internal/ubuntu disco/main amd64 libharfbuzz0b amd64 2.3.0-1 [365 kB] Get:102 http://ftpmaster.internal/ubuntu disco/main amd64 libpangoft2-1.0-0 amd64 1.42.4-6 [35.6 kB] Get:103 http://ftpmaster.internal/ubuntu disco/main amd64 libpangocairo-1.0-0 amd64 1.42.4-6 [23.2 kB] Get:104 http://ftpmaster.internal/ubuntu disco/main amd64 librsvg2-2 amd64 2.44.10-1 [1245 kB] Get:105 http://ftpmaster.internal/ubuntu disco/main amd64 librsvg2-common amd64 2.44.10-1 [9112 B] Get:106 http://ftpmaster.internal/ubuntu disco/main amd64 humanity-icon-theme all 0.6.15 [1250 kB] Get:107 http://ftpmaster.internal/ubuntu disco/main amd64 ubuntu-mono all 16.10+18.10.20181005-0ubuntu1 [149 kB] Get:108 http://ftpmaster.internal/ubuntu disco/main amd64 adwaita-icon-theme all 3.30.0-0ubuntu1 [3253 kB] Get:109 http://ftpmaster.internal/ubuntu disco/main amd64 libsigsegv2 amd64 2.12-2 [13.9 kB] Get:110 http://ftpmaster.internal/ubuntu disco/main amd64 m4 amd64 1.4.18-2 [199 kB] Get:111 http://ftpmaster.internal/ubuntu disco/main amd64 autoconf all 2.69-11 [322 kB] Get:112 http://ftpmaster.internal/ubuntu disco/main amd64 autotools-dev all 20180224.1 [39.6 kB] Get:113 http://ftpmaster.internal/ubuntu disco/main amd64 automake all 1:1.16.1-4 [522 kB] Get:114 http://ftpmaster.internal/ubuntu disco/main amd64 autopoint all 0.19.8.1-9 [412 kB] Get:115 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 bc amd64 1.07.1-2build1 [86.3 kB] Get:116 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libtool all 2.4.6-8 [195 kB] Get:117 http://ftpmaster.internal/ubuntu disco/main amd64 dh-autoreconf all 19 [16.1 kB] Get:118 http://ftpmaster.internal/ubuntu disco/main amd64 libarchive-zip-perl all 1.64-1 [84.9 kB] Get:119 http://ftpmaster.internal/ubuntu disco/main amd64 libfile-stripnondeterminism-perl all 1.1.0-1 [13.6 kB] Get:120 http://ftpmaster.internal/ubuntu disco/main amd64 dh-strip-nondeterminism all 1.1.0-1 [5100 B] Get:121 http://ftpmaster.internal/ubuntu disco/main amd64 dwz amd64 0.12-3 [78.1 kB] Get:122 http://ftpmaster.internal/ubuntu disco/main amd64 gettext amd64 0.19.8.1-9 [896 kB] Get:123 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:124 http://ftpmaster.internal/ubuntu disco/main amd64 po-debconf all 1.0.21 [233 kB] Get:125 http://ftpmaster.internal/ubuntu disco/main amd64 debhelper all 12ubuntu1 [887 kB] Get:126 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgfortran5 amd64 8.2.0-14ubuntu1 [587 kB] Get:127 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libgfortran-8-dev amd64 8.2.0-14ubuntu1 [621 kB] Get:128 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 gfortran-8 amd64 8.2.0-14ubuntu1 [7646 kB] Get:129 http://ftpmaster.internal/ubuntu disco/main amd64 gfortran amd64 4:8.2.0-2ubuntu2 [1368 B] Get:130 http://ftpmaster.internal/ubuntu disco/main amd64 libatk1.0-data all 2.30.0-2 [3032 B] Get:131 http://ftpmaster.internal/ubuntu disco/main amd64 libatk1.0-0 amd64 2.30.0-2 [44.5 kB] Get:132 http://ftpmaster.internal/ubuntu disco/main amd64 gir1.2-atk-1.0 amd64 2.30.0-2 [18.0 kB] Get:133 http://ftpmaster.internal/ubuntu disco/main amd64 gir1.2-freedesktop amd64 1.58.3-2 [9080 B] Get:134 http://ftpmaster.internal/ubuntu disco/main amd64 gir1.2-gdkpixbuf-2.0 amd64 2.38.0+dfsg-7 [8240 B] Get:135 http://ftpmaster.internal/ubuntu disco/main amd64 libgtk2.0-common all 2.24.32-3ubuntu1 [125 kB] Get:136 http://ftpmaster.internal/ubuntu disco/main amd64 libxft2 amd64 2.3.2-2 [38.5 kB] Get:137 http://ftpmaster.internal/ubuntu disco/main amd64 libpangoxft-1.0-0 amd64 1.42.4-6 [17.4 kB] Get:138 http://ftpmaster.internal/ubuntu disco/main amd64 gir1.2-pango-1.0 amd64 1.42.4-6 [23.0 kB] Get:139 http://ftpmaster.internal/ubuntu disco/main amd64 libavahi-common-data amd64 0.7-4ubuntu4 [21.4 kB] Get:140 http://ftpmaster.internal/ubuntu disco/main amd64 libavahi-common3 amd64 0.7-4ubuntu4 [21.5 kB] Get:141 http://ftpmaster.internal/ubuntu disco/main amd64 libavahi-client3 amd64 0.7-4ubuntu4 [25.2 kB] Get:142 http://ftpmaster.internal/ubuntu disco/main amd64 libcups2 amd64 2.2.10-3 [212 kB] Get:143 http://ftpmaster.internal/ubuntu disco/main amd64 libxcomposite1 amd64 1:0.4.4-2 [6988 B] Get:144 http://ftpmaster.internal/ubuntu disco/main amd64 libxfixes3 amd64 1:5.0.3-1 [10.8 kB] Get:145 http://ftpmaster.internal/ubuntu disco/main amd64 libxcursor1 amd64 1:1.1.15-2 [19.8 kB] Get:146 http://ftpmaster.internal/ubuntu disco/main amd64 libxdamage1 amd64 1:1.1.4-3 [6934 B] Get:147 http://ftpmaster.internal/ubuntu disco/main amd64 libxi6 amd64 2:1.7.9-1 [29.2 kB] Get:148 http://ftpmaster.internal/ubuntu disco/main amd64 libxinerama1 amd64 2:1.1.4-1 [7080 B] Get:149 http://ftpmaster.internal/ubuntu disco/main amd64 libxrandr2 amd64 2:1.5.1-1 [18.1 kB] Get:150 http://ftpmaster.internal/ubuntu disco/main amd64 libgtk2.0-0 amd64 2.24.32-3ubuntu1 [1777 kB] Get:151 http://ftpmaster.internal/ubuntu disco/universe amd64 gir1.2-gtk-2.0 amd64 2.24.32-3ubuntu1 [173 kB] Get:152 http://ftpmaster.internal/ubuntu disco/main amd64 gir1.2-harfbuzz-0.0 amd64 2.3.0-1 [25.1 kB] Get:153 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 hdf5-helpers amd64 1.10.4+repack-9 [13.9 kB] Get:154 http://ftpmaster.internal/ubuntu disco/main amd64 icu-devtools amd64 63.1-5 [183 kB] Get:155 http://ftpmaster.internal/ubuntu disco/universe amd64 imagemagick-6.q16 amd64 8:6.9.10.14+dfsg-7ubuntu2 [427 kB] Get:156 http://ftpmaster.internal/ubuntu disco/universe amd64 imagemagick amd64 8:6.9.10.14+dfsg-7ubuntu2 [14.4 kB] Get:157 http://ftpmaster.internal/ubuntu disco/universe amd64 libaec0 amd64 1.0.2-1 [19.1 kB] Get:158 http://ftpmaster.internal/ubuntu disco/main amd64 libsuitesparseconfig5 amd64 1:5.4.0+dfsg-1 [9212 B] Get:159 http://ftpmaster.internal/ubuntu disco/main amd64 libamd2 amd64 1:5.4.0+dfsg-1 [19.4 kB] Get:160 http://ftpmaster.internal/ubuntu disco/main amd64 libblas3 amd64 3.8.0-2 [138 kB] Get:161 http://ftpmaster.internal/ubuntu disco/main amd64 liblapack3 amd64 3.8.0-2 [2099 kB] Get:162 http://ftpmaster.internal/ubuntu disco/universe amd64 libarpack2 amd64 3.7.0-1 [90.1 kB] Get:163 http://ftpmaster.internal/ubuntu disco/main amd64 libroken18-heimdal amd64 7.5.0+dfsg-2.1 [41.4 kB] Get:164 http://ftpmaster.internal/ubuntu disco/main amd64 libasn1-8-heimdal amd64 7.5.0+dfsg-2.1 [182 kB] Get:165 http://ftpmaster.internal/ubuntu disco/main amd64 libasound2-data all 1.1.7-2ubuntu0.1 [38.7 kB] Get:166 http://ftpmaster.internal/ubuntu disco/main amd64 libasound2 amd64 1.1.7-2ubuntu0.1 [340 kB] Get:167 http://ftpmaster.internal/ubuntu disco/main amd64 pkg-config amd64 0.29.1-0ubuntu2 [45.0 kB] Get:168 http://ftpmaster.internal/ubuntu disco/main amd64 libglib2.0-bin amd64 2.58.1-2 [71.5 kB] Get:169 http://ftpmaster.internal/ubuntu disco/main amd64 python3-lib2to3 all 3.7.2-3 [74.3 kB] Get:170 http://ftpmaster.internal/ubuntu disco/main amd64 python3-distutils all 3.7.2-3 [139 kB] Get:171 http://ftpmaster.internal/ubuntu disco/main amd64 libglib2.0-dev-bin amd64 2.58.1-2 [104 kB] Get:172 http://ftpmaster.internal/ubuntu disco/main amd64 libpcre16-3 amd64 2:8.39-11 [149 kB] Get:173 http://ftpmaster.internal/ubuntu disco/main amd64 libpcre32-3 amd64 2:8.39-11 [140 kB] Get:174 http://ftpmaster.internal/ubuntu disco/main amd64 libpcrecpp0v5 amd64 2:8.39-11 [15.7 kB] Get:175 http://ftpmaster.internal/ubuntu disco/main amd64 libpcre3-dev amd64 2:8.39-11 [540 kB] Get:176 http://ftpmaster.internal/ubuntu disco/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-0ubuntu2 [176 kB] Get:177 http://ftpmaster.internal/ubuntu disco/main amd64 libglib2.0-dev amd64 2.58.1-2 [1394 kB] Get:178 http://ftpmaster.internal/ubuntu disco/main amd64 libatk1.0-dev amd64 2.30.0-2 [80.9 kB] Get:179 http://ftpmaster.internal/ubuntu disco/main amd64 libsigc++-2.0-0v5 amd64 2.10.1-2 [11.7 kB] Get:180 http://ftpmaster.internal/ubuntu disco/main amd64 libglibmm-2.4-1v5 amd64 2.58.0-2 [541 kB] Get:181 http://ftpmaster.internal/ubuntu disco/main amd64 libatkmm-1.6-1v5 amd64 2.28.0-2 [66.1 kB] Get:182 http://ftpmaster.internal/ubuntu disco/main amd64 libsigc++-2.0-dev amd64 2.10.1-2 [64.8 kB] Get:183 http://ftpmaster.internal/ubuntu disco/main amd64 libglibmm-2.4-dev amd64 2.58.0-2 [429 kB] Get:184 http://ftpmaster.internal/ubuntu disco/main amd64 libatkmm-1.6-dev amd64 2.28.0-2 [33.1 kB] Get:185 http://ftpmaster.internal/ubuntu disco/main amd64 libxt6 amd64 1:1.1.5-1 [160 kB] Get:186 http://ftpmaster.internal/ubuntu disco/universe amd64 libaudio2 amd64 1.9.4-6 [50.3 kB] Get:187 http://ftpmaster.internal/ubuntu disco/main amd64 libblas-dev amd64 3.8.0-2 [141 kB] Get:188 http://ftpmaster.internal/ubuntu disco/main amd64 libcairo-gobject2 amd64 1.16.0-2 [17.2 kB] Get:189 http://ftpmaster.internal/ubuntu disco/main amd64 liblzo2-2 amd64 2.10-0.1 [49.9 kB] Get:190 http://ftpmaster.internal/ubuntu disco/main amd64 libcairo-script-interpreter2 amd64 1.16.0-2 [53.6 kB] Get:191 http://ftpmaster.internal/ubuntu disco/main amd64 libexpat1-dev amd64 2.2.6-1 [134 kB] Get:192 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpng-dev amd64 1.6.36-3 [182 kB] Get:193 http://ftpmaster.internal/ubuntu disco/main amd64 libfreetype6-dev amd64 2.9.1-3 [497 kB] Get:194 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 uuid-dev amd64 2.33.1-0.1ubuntu1 [33.6 kB] Get:195 http://ftpmaster.internal/ubuntu disco/main amd64 libfontconfig1-dev amd64 2.13.0-5ubuntu3 [709 kB] Get:196 http://ftpmaster.internal/ubuntu disco/main amd64 xorg-sgml-doctools all 1:1.11-1 [12.9 kB] Get:197 http://ftpmaster.internal/ubuntu disco/main amd64 x11proto-dev all 2018.4-4 [251 kB] Get:198 http://ftpmaster.internal/ubuntu disco/main amd64 x11proto-core-dev all 2018.4-4 [2620 B] Get:199 http://ftpmaster.internal/ubuntu disco/main amd64 libxau-dev amd64 1:1.0.8-1 [11.1 kB] Get:200 http://ftpmaster.internal/ubuntu disco/main amd64 libxdmcp-dev amd64 1:1.1.2-3 [25.1 kB] Get:201 http://ftpmaster.internal/ubuntu disco/main amd64 x11proto-input-dev all 2018.4-4 [2620 B] Get:202 http://ftpmaster.internal/ubuntu disco/main amd64 xtrans-dev all 1.3.5-1 [70.5 kB] Get:203 http://ftpmaster.internal/ubuntu disco/main amd64 libpthread-stubs0-dev amd64 0.3-4 [4068 B] Get:204 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb1-dev amd64 1.13.1-2 [79.9 kB] Get:205 http://ftpmaster.internal/ubuntu disco/main amd64 libx11-dev amd64 2:1.6.7-1 [644 kB] Get:206 http://ftpmaster.internal/ubuntu disco/main amd64 libxrender-dev amd64 1:0.9.10-1 [24.9 kB] Get:207 http://ftpmaster.internal/ubuntu disco/main amd64 x11proto-xext-dev all 2018.4-4 [2620 B] Get:208 http://ftpmaster.internal/ubuntu disco/main amd64 libxext-dev amd64 2:1.3.3-1 [82.1 kB] Get:209 http://ftpmaster.internal/ubuntu disco/main amd64 libice-dev amd64 2:1.0.9-2 [46.8 kB] Get:210 http://ftpmaster.internal/ubuntu disco/main amd64 libsm-dev amd64 2:1.2.2-1 [16.2 kB] Get:211 http://ftpmaster.internal/ubuntu disco/main amd64 libpixman-1-dev amd64 0.36.0-1 [245 kB] Get:212 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-render0-dev amd64 1.13.1-2 [18.4 kB] Get:213 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-shm0-dev amd64 1.13.1-2 [6656 B] Get:214 http://ftpmaster.internal/ubuntu disco/main amd64 libcairo2-dev amd64 1.16.0-2 [628 kB] Get:215 http://ftpmaster.internal/ubuntu disco/main amd64 libcairomm-1.0-1v5 amd64 1.12.2-4 [38.5 kB] Get:216 http://ftpmaster.internal/ubuntu disco/main amd64 libcairomm-1.0-dev amd64 1.12.2-4 [586 kB] Get:217 http://ftpmaster.internal/ubuntu disco/main amd64 libcamd2 amd64 1:5.4.0+dfsg-1 [20.9 kB] Get:218 http://ftpmaster.internal/ubuntu disco/main amd64 libccolamd2 amd64 1:5.4.0+dfsg-1 [22.4 kB] Get:219 http://ftpmaster.internal/ubuntu disco/main amd64 libcolamd2 amd64 1:5.4.0+dfsg-1 [16.4 kB] Get:220 http://ftpmaster.internal/ubuntu disco/main amd64 libmetis5 amd64 5.1.0.dfsg-5 [169 kB] Get:221 http://ftpmaster.internal/ubuntu disco/main amd64 libcholmod3 amd64 1:5.4.0+dfsg-1 [308 kB] Get:222 http://ftpmaster.internal/ubuntu disco/main amd64 libheimbase1-heimdal amd64 7.5.0+dfsg-2.1 [29.4 kB] Get:223 http://ftpmaster.internal/ubuntu disco/main amd64 libhcrypto4-heimdal amd64 7.5.0+dfsg-2.1 [86.7 kB] Get:224 http://ftpmaster.internal/ubuntu disco/main amd64 libwind0-heimdal amd64 7.5.0+dfsg-2.1 [47.8 kB] Get:225 http://ftpmaster.internal/ubuntu disco/main amd64 libhx509-5-heimdal amd64 7.5.0+dfsg-2.1 [107 kB] Get:226 http://ftpmaster.internal/ubuntu disco/main amd64 libkrb5-26-heimdal amd64 7.5.0+dfsg-2.1 [206 kB] Get:227 http://ftpmaster.internal/ubuntu disco/main amd64 libheimntlm0-heimdal amd64 7.5.0+dfsg-2.1 [14.8 kB] Get:228 http://ftpmaster.internal/ubuntu disco/main amd64 libgssapi3-heimdal amd64 7.5.0+dfsg-2.1 [96.4 kB] Get:229 http://ftpmaster.internal/ubuntu disco/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-1 [14.9 kB] Get:230 http://ftpmaster.internal/ubuntu disco/main amd64 libsasl2-2 amd64 2.1.27+dfsg-1 [49.4 kB] Get:231 http://ftpmaster.internal/ubuntu disco/main amd64 libldap-common all 2.4.47+dfsg-2ubuntu1 [16.2 kB] Get:232 http://ftpmaster.internal/ubuntu disco/main amd64 libldap-2.4-2 amd64 2.4.47+dfsg-2ubuntu1 [154 kB] Get:233 http://ftpmaster.internal/ubuntu disco/main amd64 libnghttp2-14 amd64 1.35.1-1 [78.9 kB] Get:234 http://ftpmaster.internal/ubuntu disco/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2 [54.5 kB] Get:235 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libcurl3-gnutls amd64 7.63.0-1 [221 kB] Get:236 http://ftpmaster.internal/ubuntu disco/main amd64 libcxsparse3 amd64 1:5.4.0+dfsg-1 [62.0 kB] Get:237 http://ftpmaster.internal/ubuntu disco/main amd64 libdrm-amdgpu1 amd64 2.4.95-1 [17.4 kB] Get:238 http://ftpmaster.internal/ubuntu disco/main amd64 libpciaccess0 amd64 0.14-1 [17.9 kB] Get:239 http://ftpmaster.internal/ubuntu disco/main amd64 libdrm-intel1 amd64 2.4.95-1 [60.0 kB] Get:240 http://ftpmaster.internal/ubuntu disco/main amd64 libdrm-radeon1 amd64 2.4.95-1 [21.4 kB] Get:241 http://ftpmaster.internal/ubuntu disco/main amd64 libdrm-nouveau2 amd64 2.4.95-1 [16.5 kB] Get:242 http://ftpmaster.internal/ubuntu disco/main amd64 libdrm-dev amd64 2.4.95-1 [121 kB] Get:243 http://ftpmaster.internal/ubuntu disco/main amd64 libwayland-server0 amd64 1.16.0-1ubuntu2 [29.5 kB] Get:244 http://ftpmaster.internal/ubuntu disco/main amd64 libgbm1 amd64 18.3.2-1ubuntu1 [27.9 kB] Get:245 http://ftpmaster.internal/ubuntu disco/main amd64 libglapi-mesa amd64 18.3.2-1ubuntu1 [26.1 kB] Get:246 http://ftpmaster.internal/ubuntu disco/main amd64 libwayland-client0 amd64 1.16.0-1ubuntu2 [23.6 kB] Get:247 http://ftpmaster.internal/ubuntu disco/main amd64 libx11-xcb1 amd64 2:1.6.7-1 [9204 B] Get:248 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-dri2-0 amd64 1.13.1-2 [6892 B] Get:249 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-dri3-0 amd64 1.13.1-2 [6488 B] Get:250 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-present0 amd64 1.13.1-2 [5544 B] Get:251 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-sync1 amd64 1.13.1-2 [8832 B] Get:252 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-xfixes0 amd64 1.13.1-2 [9256 B] Get:253 http://ftpmaster.internal/ubuntu disco/main amd64 libxshmfence1 amd64 1.3-1 [5028 B] Get:254 http://ftpmaster.internal/ubuntu disco/main amd64 libegl-mesa0 amd64 18.3.2-1ubuntu1 [97.3 kB] Get:255 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-long3 amd64 3.3.8-2 [312 kB] Get:256 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-quad3 amd64 3.3.8-2 [552 kB] Get:257 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-single3 amd64 3.3.8-2 [757 kB] Get:258 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-bin amd64 3.3.8-2 [32.2 kB] Get:259 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-dev amd64 3.3.8-2 [2087 kB] Get:260 http://ftpmaster.internal/ubuntu disco/main amd64 libflac8 amd64 1.3.2-3 [213 kB] Get:261 http://ftpmaster.internal/ubuntu disco/universe amd64 libfltk1.3 amd64 1.3.4-7 [520 kB] Get:262 http://ftpmaster.internal/ubuntu disco/main amd64 libglvnd0 amd64 1.1.0-1 [47.6 kB] Get:263 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-glx0 amd64 1.13.1-2 [21.9 kB] Get:264 http://ftpmaster.internal/ubuntu disco/main amd64 libllvm7 amd64 1:7.0.1-4 [13.0 MB] Get:265 http://ftpmaster.internal/ubuntu disco/main amd64 libsensors-config all 1:3.5.0-3ubuntu1 [6168 B] Get:266 http://ftpmaster.internal/ubuntu disco/main amd64 libsensors5 amd64 1:3.5.0-3ubuntu1 [27.1 kB] Get:267 http://ftpmaster.internal/ubuntu disco/main amd64 libgl1-mesa-dri amd64 18.3.2-1ubuntu1 [7314 kB] Get:268 http://ftpmaster.internal/ubuntu disco/main amd64 libglx-mesa0 amd64 18.3.2-1ubuntu1 [141 kB] Get:269 http://ftpmaster.internal/ubuntu disco/main amd64 libglx0 amd64 1.1.0-1 [28.2 kB] Get:270 http://ftpmaster.internal/ubuntu disco/main amd64 libgl1 amd64 1.1.0-1 [88.7 kB] Get:271 http://ftpmaster.internal/ubuntu disco/universe amd64 libfltk-gl1.3 amd64 1.3.4-7 [37.6 kB] Get:272 http://ftpmaster.internal/ubuntu disco/main amd64 libfribidi-dev amd64 1.0.5-3.1 [62.1 kB] Get:273 http://ftpmaster.internal/ubuntu disco/main amd64 libgdk-pixbuf2.0-bin amd64 2.38.0+dfsg-7 [13.9 kB] Get:274 http://ftpmaster.internal/ubuntu disco/main amd64 libgdk-pixbuf2.0-dev amd64 2.38.0+dfsg-7 [39.2 kB] Get:275 http://ftpmaster.internal/ubuntu disco/universe amd64 libgl2ps1.4 amd64 1.4.0+dfsg1-2 [38.2 kB] Get:276 http://ftpmaster.internal/ubuntu disco/main amd64 libgles1 amd64 1.1.0-1 [12.1 kB] Get:277 http://ftpmaster.internal/ubuntu disco/universe amd64 libglpk40 amd64 4.65-2 [378 kB] Get:278 http://ftpmaster.internal/ubuntu disco/main amd64 libglu1-mesa amd64 9.0.0-2.1build1 [168 kB] Get:279 http://ftpmaster.internal/ubuntu disco/main amd64 mesa-common-dev amd64 18.3.2-1ubuntu1 [566 kB] Get:280 http://ftpmaster.internal/ubuntu disco/main amd64 libglvnd-core-dev amd64 1.1.0-1 [12.6 kB] Get:281 http://ftpmaster.internal/ubuntu disco/main amd64 libegl1 amd64 1.1.0-1 [31.8 kB] Get:282 http://ftpmaster.internal/ubuntu disco/main amd64 libgles2 amd64 1.1.0-1 [17.3 kB] Get:283 http://ftpmaster.internal/ubuntu disco/main amd64 libopengl0 amd64 1.1.0-1 [31.6 kB] Get:284 http://ftpmaster.internal/ubuntu disco/main amd64 libglvnd-dev amd64 1.1.0-1 [3388 B] Get:285 http://ftpmaster.internal/ubuntu disco/main amd64 libx11-xcb-dev amd64 2:1.6.7-1 [9764 B] Get:286 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-dri3-dev amd64 1.13.1-2 [7352 B] Get:287 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-randr0 amd64 1.13.1-2 [16.3 kB] Get:288 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-randr0-dev amd64 1.13.1-2 [20.4 kB] Get:289 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-shape0 amd64 1.13.1-2 [5908 B] Get:290 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-shape0-dev amd64 1.13.1-2 [7136 B] Get:291 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-xfixes0-dev amd64 1.13.1-2 [11.6 kB] Get:292 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-sync-dev amd64 1.13.1-2 [10.6 kB] Get:293 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-present-dev amd64 1.13.1-2 [6972 B] Get:294 http://ftpmaster.internal/ubuntu disco/main amd64 libxshmfence-dev amd64 1.3-1 [3692 B] Get:295 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-dri2-0-dev amd64 1.13.1-2 [8460 B] Get:296 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-glx0-dev amd64 1.13.1-2 [27.9 kB] Get:297 http://ftpmaster.internal/ubuntu disco/main amd64 x11proto-fixes-dev all 1:2018.4-4 [2620 B] Get:298 http://ftpmaster.internal/ubuntu disco/main amd64 libxfixes-dev amd64 1:5.0.3-1 [11.0 kB] Get:299 http://ftpmaster.internal/ubuntu disco/main amd64 x11proto-damage-dev all 1:2018.4-4 [2620 B] Get:300 http://ftpmaster.internal/ubuntu disco/main amd64 libxdamage-dev amd64 1:1.1.4-3 [5028 B] Get:301 http://ftpmaster.internal/ubuntu disco/main amd64 x11proto-xf86vidmode-dev all 2018.4-4 [2632 B] Get:302 http://ftpmaster.internal/ubuntu disco/main amd64 libxxf86vm-dev amd64 1:1.1.4-1 [13.3 kB] Get:303 http://ftpmaster.internal/ubuntu disco/main amd64 libgl1-mesa-dev amd64 18.3.2-1ubuntu1 [6040 B] Get:304 http://ftpmaster.internal/ubuntu disco/main amd64 libglu1-mesa-dev amd64 9.0.0-2.1build1 [206 kB] Get:305 http://ftpmaster.internal/ubuntu disco/main amd64 libwebpmux3 amd64 0.6.1-2 [19.6 kB] Get:306 http://ftpmaster.internal/ubuntu disco/main amd64 libwmf0.2-7 amd64 0.2.8.4-14 [149 kB] Get:307 http://ftpmaster.internal/ubuntu disco/universe amd64 libgraphicsmagick-q16-3 amd64 1.4~hg15873-1 [1150 kB] Get:308 http://ftpmaster.internal/ubuntu disco/universe amd64 libgraphicsmagick++-q16-12 amd64 1.4~hg15873-1 [101 kB] Get:309 http://ftpmaster.internal/ubuntu disco/main amd64 libgraphite2-dev amd64 1.3.13-7 [14.7 kB] Get:310 http://ftpmaster.internal/ubuntu disco/universe amd64 libgslcblas0 amd64 2.5+dfsg-6 [84.1 kB] Get:311 http://ftpmaster.internal/ubuntu disco/universe amd64 libgsl23 amd64 2.5+dfsg-6 [854 kB] Get:312 http://ftpmaster.internal/ubuntu disco/universe amd64 libgsl-dev amd64 2.5+dfsg-6 [1064 kB] Get:313 http://ftpmaster.internal/ubuntu disco/main amd64 libharfbuzz-icu0 amd64 2.3.0-1 [5460 B] Get:314 http://ftpmaster.internal/ubuntu disco/main amd64 libharfbuzz-gobject0 amd64 2.3.0-1 [19.4 kB] Get:315 http://ftpmaster.internal/ubuntu disco/main amd64 libicu-dev amd64 63.1-5 [9178 kB] Get:316 http://ftpmaster.internal/ubuntu disco/main amd64 libharfbuzz-dev amd64 2.3.0-1 [485 kB] Get:317 http://ftpmaster.internal/ubuntu disco/main amd64 libxft-dev amd64 2.3.2-2 [48.6 kB] Get:318 http://ftpmaster.internal/ubuntu disco/main amd64 pango1.0-tools amd64 1.42.4-6 [23.7 kB] Get:319 http://ftpmaster.internal/ubuntu disco/main amd64 libpango1.0-dev amd64 1.42.4-6 [106 kB] Get:320 http://ftpmaster.internal/ubuntu disco/main amd64 x11proto-xinerama-dev all 2018.4-4 [2628 B] Get:321 http://ftpmaster.internal/ubuntu disco/main amd64 libxinerama-dev amd64 2:1.1.4-1 [7888 B] Get:322 http://ftpmaster.internal/ubuntu disco/main amd64 libxi-dev amd64 2:1.7.9-1 [186 kB] Get:323 http://ftpmaster.internal/ubuntu disco/main amd64 x11proto-randr-dev all 2018.4-4 [2620 B] Get:324 http://ftpmaster.internal/ubuntu disco/main amd64 libxrandr-dev amd64 2:1.5.1-1 [24.0 kB] Get:325 http://ftpmaster.internal/ubuntu disco/main amd64 libxcursor-dev amd64 1:1.1.15-2 [26.3 kB] Get:326 http://ftpmaster.internal/ubuntu disco/main amd64 x11proto-composite-dev all 1:2018.4-4 [2620 B] Get:327 http://ftpmaster.internal/ubuntu disco/main amd64 libxcomposite-dev amd64 1:0.4.4-2 [9136 B] Get:328 http://ftpmaster.internal/ubuntu disco/main amd64 libxml2-utils amd64 2.9.4+dfsg1-7ubuntu3 [36.2 kB] Get:329 http://ftpmaster.internal/ubuntu disco/universe amd64 libgtk2.0-dev amd64 2.24.32-3ubuntu1 [2652 kB] Get:330 http://ftpmaster.internal/ubuntu disco/main amd64 libxmu6 amd64 2:1.1.2-2 [46.0 kB] Get:331 http://ftpmaster.internal/ubuntu disco/universe amd64 libgtkglext1 amd64 1.2.0-9 [74.0 kB] Get:332 http://ftpmaster.internal/ubuntu disco/universe amd64 libpangox-1.0-dev amd64 0.0.2-5 [41.7 kB] Get:333 http://ftpmaster.internal/ubuntu disco/main amd64 libxt-dev amd64 1:1.1.5-1 [395 kB] Get:334 http://ftpmaster.internal/ubuntu disco/main amd64 libxmu-headers all 2:1.1.2-2 [54.3 kB] Get:335 http://ftpmaster.internal/ubuntu disco/main amd64 libxmu-dev amd64 2:1.1.2-2 [49.0 kB] Get:336 http://ftpmaster.internal/ubuntu disco/universe amd64 libgtkglext1-dev amd64 1.2.0-9 [360 kB] Get:337 http://ftpmaster.internal/ubuntu disco/main amd64 libpangomm-1.4-1v5 amd64 2.42.0-2 [44.0 kB] Get:338 http://ftpmaster.internal/ubuntu disco/main amd64 libgtkmm-2.4-1v5 amd64 1:2.24.5-2 [666 kB] Get:339 http://ftpmaster.internal/ubuntu disco/main amd64 libpangomm-1.4-dev amd64 2.42.0-2 [49.7 kB] Get:340 http://ftpmaster.internal/ubuntu disco/universe amd64 libgtkmm-2.4-dev amd64 1:2.24.5-2 [493 kB] Get:341 http://ftpmaster.internal/ubuntu disco/main amd64 libgudev-1.0-0 amd64 1:232-2 [13.6 kB] Get:342 http://ftpmaster.internal/ubuntu disco/universe amd64 libsz2 amd64 1.0.2-1 [5152 B] Get:343 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libhdf5-103 amd64 1.10.4+repack-9 [1294 kB] Get:344 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-9 [122 kB] Get:345 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg-turbo8-dev amd64 2.0.1-0ubuntu1 [238 kB] Get:346 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg8-dev amd64 8c-2ubuntu8 [1552 B] Get:347 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg-dev amd64 8c-2ubuntu8 [1546 B] Get:348 http://ftpmaster.internal/ubuntu disco/universe amd64 libaec-dev amd64 1.0.2-1 [16.9 kB] Get:349 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libhdf5-dev amd64 1.10.4+repack-9 [2571 kB] Get:350 http://ftpmaster.internal/ubuntu disco/main amd64 libevdev2 amd64 1.6.0+dfsg-1 [29.1 kB] Get:351 http://ftpmaster.internal/ubuntu disco/main amd64 libwacom-common all 0.31-1 [38.1 kB] Get:352 http://ftpmaster.internal/ubuntu disco/main amd64 libwacom2 amd64 0.31-1 [18.0 kB] Get:353 http://ftpmaster.internal/ubuntu disco/main amd64 libinput-bin amd64 1.12.4-1 [13.5 kB] Get:354 http://ftpmaster.internal/ubuntu disco/main amd64 libmtdev1 amd64 1.1.5-1ubuntu3 [13.8 kB] Get:355 http://ftpmaster.internal/ubuntu disco/main amd64 libinput10 amd64 1.12.4-1 [102 kB] Get:356 http://ftpmaster.internal/ubuntu disco/main amd64 libsamplerate0 amd64 0.1.9-2 [939 kB] Get:357 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libjack-jackd2-0 amd64 1.9.12~dfsg-2build1 [265 kB] Get:358 http://ftpmaster.internal/ubuntu disco/main amd64 liblapack-dev amd64 3.8.0-2 [2127 kB] Get:359 http://ftpmaster.internal/ubuntu disco/main amd64 libncurses-dev amd64 6.1+20180210-4ubuntu1 [333 kB] Get:360 http://ftpmaster.internal/ubuntu disco/universe amd64 libqrupdate1 amd64 1.1.2-3 [36.2 kB] Get:361 http://ftpmaster.internal/ubuntu disco/main amd64 libumfpack5 amd64 1:5.4.0+dfsg-1 [228 kB] Get:362 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 liboctave6 amd64 4.4.1-4build1 [7043 kB] Get:363 http://ftpmaster.internal/ubuntu disco/universe amd64 libpcre2-16-0 amd64 10.32-3 [169 kB] Get:364 http://ftpmaster.internal/ubuntu disco/universe amd64 libportaudio2 amd64 19.6.0-1 [64.6 kB] Get:365 http://ftpmaster.internal/ubuntu disco/universe amd64 libqhull7 amd64 2015.2-4 [152 kB] Get:366 http://ftpmaster.internal/ubuntu disco/universe amd64 libqscintilla2-qt5-l10n all 2.10.4+dfsg-1build2 [39.9 kB] Get:367 http://ftpmaster.internal/ubuntu disco/universe amd64 libdouble-conversion1 amd64 3.1.0-2 [37.9 kB] Get:368 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt5core5a amd64 5.11.3+dfsg-2ubuntu1 [1917 kB] Get:369 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt5dbus5 amd64 5.11.3+dfsg-2ubuntu1 [200 kB] Get:370 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt5network5 amd64 5.11.3+dfsg-2ubuntu1 [650 kB] Get:371 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [10.8 kB] Get:372 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-util1 amd64 0.4.0-0ubuntu3 [11.2 kB] Get:373 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-image0 amd64 0.4.0-1build1 [12.3 kB] Get:374 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-xinerama0 amd64 1.13.1-2 [5240 B] Get:375 http://ftpmaster.internal/ubuntu disco/main amd64 libxcb-xkb1 amd64 1.13.1-2 [29.0 kB] Get:376 http://ftpmaster.internal/ubuntu disco/main amd64 libxkbcommon0 amd64 0.8.2-1 [97.8 kB] Get:377 http://ftpmaster.internal/ubuntu disco/main amd64 libxkbcommon-x11-0 amd64 0.8.2-1 [13.5 kB] Get:378 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt5gui5 amd64 5.11.3+dfsg-2ubuntu1 [2813 kB] Get:379 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt5widgets5 amd64 5.11.3+dfsg-2ubuntu1 [2235 kB] Get:380 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt5printsupport5 amd64 5.11.3+dfsg-2ubuntu1 [189 kB] Get:381 http://ftpmaster.internal/ubuntu disco/universe amd64 libqscintilla2-qt5-13 amd64 2.10.4+dfsg-1build2 [1038 kB] Get:382 http://ftpmaster.internal/ubuntu disco/universe amd64 qtcore4-l10n all 4:4.8.7+dfsg-7ubuntu1 [617 kB] Get:383 http://ftpmaster.internal/ubuntu disco/universe amd64 libqtcore4 amd64 4:4.8.7+dfsg-7ubuntu1 [1552 kB] Get:384 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-xml amd64 4:4.8.7+dfsg-7ubuntu1 [96.1 kB] Get:385 http://ftpmaster.internal/ubuntu disco/universe amd64 libqtdbus4 amd64 4:4.8.7+dfsg-7ubuntu1 [186 kB] Get:386 http://ftpmaster.internal/ubuntu disco/universe amd64 qtchooser amd64 66-1 [24.8 kB] Get:387 http://ftpmaster.internal/ubuntu disco/universe amd64 qdbus amd64 4:4.8.7+dfsg-7ubuntu1 [30.0 kB] Get:388 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-dbus amd64 4:4.8.7+dfsg-7ubuntu1 [6440 B] Get:389 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-network amd64 4:4.8.7+dfsg-7ubuntu1 [562 kB] Get:390 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-script amd64 4:4.8.7+dfsg-7ubuntu1 [815 kB] Get:391 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-sql amd64 4:4.8.7+dfsg-7ubuntu1 [98.5 kB] Get:392 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-xmlpatterns amd64 4:4.8.7+dfsg-7ubuntu1 [1091 kB] Get:393 http://ftpmaster.internal/ubuntu disco/universe amd64 libqtgui4 amd64 4:4.8.7+dfsg-7ubuntu1 [4115 kB] Get:394 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-declarative amd64 4:4.8.7+dfsg-7ubuntu1 [1089 kB] Get:395 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-designer amd64 4:4.8.7+dfsg-7ubuntu1 [3629 kB] Get:396 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-qt3support amd64 4:4.8.7+dfsg-7ubuntu1 [1049 kB] Get:397 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-dev-bin amd64 4:4.8.7+dfsg-7ubuntu1 [1706 kB] Get:398 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-help amd64 4:4.8.7+dfsg-7ubuntu1 [207 kB] Get:399 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-scripttools amd64 4:4.8.7+dfsg-7ubuntu1 [225 kB] Get:400 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-svg amd64 4:4.8.7+dfsg-7ubuntu1 [138 kB] Get:401 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-test amd64 4:4.8.7+dfsg-7ubuntu1 [61.2 kB] Get:402 http://ftpmaster.internal/ubuntu disco/universe amd64 qt4-linguist-tools amd64 4:4.8.7+dfsg-7ubuntu1 [879 kB] Get:403 http://ftpmaster.internal/ubuntu disco/universe amd64 qt4-qmake amd64 4:4.8.7+dfsg-7ubuntu1 [1366 kB] Get:404 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-dev amd64 4:4.8.7+dfsg-7ubuntu1 [853 kB] Get:405 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-opengl amd64 4:4.8.7+dfsg-7ubuntu1 [301 kB] Get:406 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt4-opengl-dev amd64 4:4.8.7+dfsg-7ubuntu1 [22.8 kB] Get:407 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt5sql5 amd64 5.11.3+dfsg-2ubuntu1 [117 kB] Get:408 http://ftpmaster.internal/ubuntu disco/universe amd64 libqt5help5 amd64 5.11.3-4 [142 kB] Get:409 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libreadline-dev amd64 8.0-1 [140 kB] Get:410 http://ftpmaster.internal/ubuntu disco/main amd64 libvorbis0a amd64 1.3.6-1 [86.0 kB] Get:411 http://ftpmaster.internal/ubuntu disco/main amd64 libvorbisenc2 amd64 1.3.6-1 [70.6 kB] Get:412 http://ftpmaster.internal/ubuntu disco/main amd64 libsndfile1 amd64 1.0.28-4 [169 kB] Get:413 http://ftpmaster.internal/ubuntu disco/universe amd64 libtext-unidecode-perl all 1.30-1 [99.0 kB] Get:414 http://ftpmaster.internal/ubuntu disco/main amd64 libxml-namespacesupport-perl all 1.12-1 [13.2 kB] Get:415 http://ftpmaster.internal/ubuntu disco/main amd64 libxml-sax-base-perl all 1.09-1 [18.8 kB] Get:416 http://ftpmaster.internal/ubuntu disco/main amd64 libxml-sax-perl all 1.00+dfsg-1.1~build1 [56.1 kB] Get:417 http://ftpmaster.internal/ubuntu disco/main amd64 libxml-libxml-perl amd64 2.0132+dfsg-2build1 [319 kB] Get:418 http://ftpmaster.internal/ubuntu disco/universe amd64 matlab-support-dev all 0.0.21 [6258 B] Get:419 http://ftpmaster.internal/ubuntu disco/universe amd64 texinfo amd64 6.5.0.dfsg.1-4build1 [848 kB] Get:420 http://ftpmaster.internal/ubuntu disco/universe amd64 libeigen3-dev all 3.3.7-1 [814 kB] Get:421 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 octave-common all 4.4.1-4build1 [4034 kB] Get:422 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 octave amd64 4.4.1-4build1 [1759 kB] Get:423 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 liboctave-dev amd64 4.4.1-4build1 [458 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 168 MB in 4s (41.9 MB/s) Selecting previously unselected package libpython3.7-minimal:amd64. 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Setting up imagemagick-6-common (8:6.9.10.14+dfsg-7ubuntu2) ... Setting up libglvnd0:amd64 (1.1.0-1) ... Setting up libsensors-config (1:3.5.0-3ubuntu1) ... Setting up libopengl0:amd64 (1.1.0-1) ... Setting up libcxsparse3:amd64 (1:5.4.0+dfsg-1) ... Setting up libgles1:amd64 (1.1.0-1) ... Setting up libaec0:amd64 (1.0.2-1) ... Setting up libgtk2.0-common (2.24.32-3ubuntu1) ... Setting up libqhull7:amd64 (2015.2-4) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libwacom-common (0.31-1) ... Setting up libnghttp2-14:amd64 (1.35.1-1) ... Setting up libdouble-conversion1:amd64 (3.1.0-2) ... Setting up mime-support (3.60ubuntu1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up libicu63:amd64 (63.1-5) ... Setting up libevdev2:amd64 (1.6.0+dfsg-1) ... Setting up liblcms2-2:amd64 (2.9-3) ... Setting up libjbig0:amd64 (2.1-3.1build1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libldap-common (2.4.47+dfsg-2ubuntu1) ... 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Setting up python3.7 (3.7.2-1build1) ... Setting up autoconf (2.69-11) ... Setting up libthai0:amd64 (0.1.28-1) ... Setting up libqt4-sql:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up libicu-dev (63.1-5) ... Setting up libhdf5-103:amd64 (1.10.4+repack-9) ... Setting up file (1:5.35-2) ... Setting up libmng2:amd64 (2.0.2-0ubuntu3) ... Setting up libinput-bin (1.12.4-1) ... Setting up libhx509-5-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libdrm2:amd64 (2.4.95-1) ... Setting up libqrupdate1:amd64 (1.1.2-3) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libamd2:amd64 (1:5.4.0+dfsg-1) ... Setting up libdrm-intel1:amd64 (2.4.95-1) ... Setting up libxdmcp-dev:amd64 (1:1.1.2-3) ... Setting up libjpeg8-dev:amd64 (8c-2ubuntu8) ... Setting up gir1.2-harfbuzz-0.0:amd64 (2.3.0-1) ... Setting up libjpeg-dev:amd64 (8c-2ubuntu8) ... Setting up libfribidi-dev:amd64 (1.0.5-3.1) ... Setting up libwebpmux3:amd64 (0.6.1-2) ... Setting up libfftw3-dev:amd64 (3.3.8-2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libqt5sql5:amd64 (5.11.3+dfsg-2ubuntu1) ... Setting up libreadline-dev:amd64 (8.0-1) ... Setting up libjack-jackd2-0:amd64 (1.9.12~dfsg-2build1) ... Setting up libice6:amd64 (2:1.0.9-2) ... Setting up libarpack2:amd64 (3.7.0-1) ... Setting up man-db (2.8.5-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libpython2-stdlib:amd64 (2.7.15-4) ... Setting up libkrb5-3:amd64 (1.17-1) ... Setting up libavahi-common3:amd64 (0.7-4ubuntu4) ... Setting up libdrm-radeon1:amd64 (2.4.95-1) ... Setting up libglibmm-2.4-1v5:amd64 (2.58.0-2) ... Setting up libxml-libxml-perl (2.0132+dfsg-2build1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libkrb5-26-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libpng-dev:amd64 (1.6.36-3) ... Setting up libvorbisenc2:amd64 (1.3.6-1) ... Setting up libdrm-nouveau2:amd64 (2.4.95-1) ... Setting up libgfortran-8-dev:amd64 (8.2.0-14ubuntu1) ... Setting up libqtdbus4:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up libxcb1:amd64 (1.13.1-2) ... Setting up libharfbuzz-gobject0:amd64 (2.3.0-1) ... Setting up libheimntlm0-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libatkmm-1.6-1v5:amd64 (2.28.0-2) ... Setting up libxcb-xkb1:amd64 (1.13.1-2) ... Setting up liblapack-dev:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libtool (2.4.6-8) ... Setting up libxcb-xinerama0:amd64 (1.13.1-2) ... Setting up libpython3-stdlib:amd64 (3.7.2-1) ... Setting up libxcb-present0:amd64 (1.13.1-2) ... Setting up libfontconfig1:amd64 (2.13.0-5ubuntu3) ... Setting up libxcb-dri2-0:amd64 (1.13.1-2) ... Setting up libsm6:amd64 (2:1.2.2-1) ... Setting up libxcb-dri3-0:amd64 (1.13.1-2) ... Setting up libxcb-glx0:amd64 (1.13.1-2) ... Setting up libxcb-randr0:amd64 (1.13.1-2) ... Setting up libxcb-xfixes0:amd64 (1.13.1-2) ... Setting up libxcb-icccm4:amd64 (0.4.1-1.1) ... Setting up libxcb-render0:amd64 (1.13.1-2) ... Setting up libportaudio2:amd64 (19.6.0-1) ... Setting up libharfbuzz-icu0:amd64 (2.3.0-1) ... Setting up libglpk40:amd64 (4.65-2) ... Setting up po-debconf (1.0.21) ... Setting up python3 (3.7.2-1) ... Setting up libdrm-amdgpu1:amd64 (2.4.95-1) ... Setting up libqt4-script:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up gfortran-8 (8.2.0-14ubuntu1) ... Setting up libdrm-dev:amd64 (2.4.95-1) ... Setting up libgbm1:amd64 (18.3.2-1ubuntu1) ... Setting up libx11-6:amd64 (2:1.6.7-1) ... Setting up libinput10:amd64 (1.12.4-1) ... Setting up libgl1-mesa-dri:amd64 (18.3.2-1ubuntu1) ... Setting up libhdf5-cpp-103:amd64 (1.10.4+repack-9) ... Setting up libhdf5-dev (1.10.4+repack-9) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libxcb-util1:amd64 (0.4.0-0ubuntu3) ... Setting up libxkbcommon-x11-0:amd64 (0.8.2-1) ... Setting up python2 (2.7.15-4) ... Setting up libcholmod3:amd64 (1:5.4.0+dfsg-1) ... Setting up qdbus (4:4.8.7+dfsg-7ubuntu1) ... Setting up libxcb-sync1:amd64 (1.13.1-2) ... Setting up libgssapi-krb5-2:amd64 (1.17-1) ... Setting up libpython-stdlib:amd64 (2.7.15-4) ... Setting up libsndfile1:amd64 (1.0.28-4) ... Setting up libfreetype6-dev:amd64 (2.9.1-3) ... Setting up libice-dev:amd64 (2:1.0.9-2) ... Setting up libxcomposite1:amd64 (1:0.4.4-2) ... Setting up libxcb-shm0:amd64 (1.13.1-2) ... Setting up libxt6:amd64 (1:1.1.5-1) ... Setting up libxcb-shape0:amd64 (1.13.1-2) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libxcb1-dev:amd64 (1.13.1-2) ... Setting up libxcb-glx0-dev:amd64 (1.13.1-2) ... Setting up libavahi-client3:amd64 (0.7-4ubuntu4) ... Setting up libxcb-keysyms1:amd64 (0.4.0-1) ... Setting up libegl-mesa0:amd64 (18.3.2-1ubuntu1) ... Setting up texinfo (6.5.0.dfsg.1-4build1) ... Setting up libx11-dev:amd64 (2:1.6.7-1) ... Setting up libxft2:amd64 (2.3.2-2) ... Setting up libgssapi3-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libqt4-dbus:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up python3-lib2to3 (3.7.2-3) ... Setting up libwmf0.2-7:amd64 (0.2.8.4-14) ... Setting up libqt4-network:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up python3-distutils (3.7.2-3) ... Setting up python (2.7.15-4) ... Setting up libxcb-sync-dev:amd64 (1.13.1-2) ... Setting up libaudio2:amd64 (1.9.4-6) ... Setting up fontconfig (2.13.0-5ubuntu3) ... Regenerating fonts cache... done. Setting up libcups2:amd64 (2.2.10-3) ... Setting up libfontconfig1-dev:amd64 (2.13.0-5ubuntu3) ... Setting up gfortran (4:8.2.0-2ubuntu2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libx11-xcb-dev:amd64 (2:1.6.7-1) ... Setting up libsm-dev:amd64 (2:1.2.2-1) ... Setting up libxcb-render-util0:amd64 (0.3.9-1) ... Setting up libxdamage1:amd64 (1:1.1.4-3) ... Setting up libxcb-image0:amd64 (0.4.0-1build1) ... Setting up mesa-common-dev:amd64 (18.3.2-1ubuntu1) ... Setting up libxext6:amd64 (2:1.3.3-1) ... Setting up libxfixes3:amd64 (1:5.0.3-1) ... Setting up libglib2.0-dev-bin (2.58.1-2) ... Setting up libxmu-headers (2:1.1.2-2) ... Setting up libgdk-pixbuf2.0-0:amd64 (2.38.0+dfsg-7) ... Setting up libxcb-shm0-dev:amd64 (1.13.1-2) ... Setting up libgdk-pixbuf2.0-bin (2.38.0+dfsg-7) ... Setting up libumfpack5:amd64 (1:5.4.0+dfsg-1) ... Setting up gir1.2-gdkpixbuf-2.0:amd64 (2.38.0+dfsg-7) ... Setting up libxrender-dev:amd64 (1:0.9.10-1) ... Setting up libqt4-xmlpatterns:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up libglib2.0-dev:amd64 (2.58.1-2) ... Setting up libgraphicsmagick-q16-3 (1.4~hg15873-1) ... Setting up libxmu6:amd64 (2:1.1.2-2) ... Setting up libxcb-dri2-0-dev:amd64 (1.13.1-2) ... Setting up libxcb-render0-dev:amd64 (1.13.1-2) ... Setting up libegl1:amd64 (1.1.0-1) ... Setting up libxft-dev:amd64 (2.3.2-2) ... Setting up gtk-update-icon-cache (3.24.4-1ubuntu1) ... Setting up libgdk-pixbuf2.0-dev:amd64 (2.38.0+dfsg-7) ... Setting up libxcb-dri3-dev:amd64 (1.13.1-2) ... Setting up libxcursor1:amd64 (1:1.1.15-2) ... Setting up libmagickcore-6.q16-6:amd64 (8:6.9.10.14+dfsg-7ubuntu2) ... Setting up libldap-2.4-2:amd64 (2.4.47+dfsg-2ubuntu1) ... Setting up libxext-dev:amd64 (2:1.3.3-1) ... Setting up libpango-1.0-0:amd64 (1.42.4-6) ... Setting up libxcb-shape0-dev:amd64 (1.13.1-2) ... Setting up libpangox-1.0-0:amd64 (0.0.2-5) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1) ... Setting up libxxf86vm-dev:amd64 (1:1.1.4-1) ... Setting up libxfixes-dev:amd64 (1:5.0.3-1) ... Setting up libharfbuzz-dev:amd64 (2.3.0-1) ... Setting up libxrandr2:amd64 (2:1.5.1-1) ... Setting up libglx-mesa0:amd64 (18.3.2-1ubuntu1) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up libgraphicsmagick++-q16-12 (1.4~hg15873-1) ... Setting up libcairo2:amd64 (1.16.0-2) ... Setting up libcairomm-1.0-1v5:amd64 (1.12.2-4) ... Setting up libxinerama1:amd64 (2:1.1.4-1) ... Setting up libxcursor-dev:amd64 (1:1.1.15-2) ... Setting up libxcb-randr0-dev:amd64 (1.13.1-2) ... Setting up libxt-dev:amd64 (1:1.1.5-1) ... Setting up libxrandr-dev:amd64 (2:1.5.1-1) ... Setting up libglibmm-2.4-dev:amd64 (2.58.0-2) ... Setting up libxcomposite-dev:amd64 (1:0.4.4-2) ... Setting up libxmu-dev:amd64 (2:1.1.2-2) ... Setting up libcairo-script-interpreter2:amd64 (1.16.0-2) ... Setting up libxcb-xfixes0-dev:amd64 (1.13.1-2) ... Setting up libcurl3-gnutls:amd64 (7.63.0-1) ... Setting up libcairo-gobject2:amd64 (1.16.0-2) ... Setting up libxdamage-dev:amd64 (1:1.1.4-3) ... Setting up libatk1.0-dev:amd64 (2.30.0-2) ... Setting up libpangoft2-1.0-0:amd64 (1.42.4-6) ... Setting up libmagickwand-6.q16-6:amd64 (8:6.9.10.14+dfsg-7ubuntu2) ... Setting up libxinerama-dev:amd64 (2:1.1.4-1) ... Setting up libfltk1.3:amd64 (1.3.4-7) ... Setting up libxcb-present-dev:amd64 (1.13.1-2) ... Setting up libxi-dev:amd64 (2:1.7.9-1) ... Setting up libglx0:amd64 (1.1.0-1) ... Setting up libcairo2-dev:amd64 (1.16.0-2) ... Setting up libatkmm-1.6-dev:amd64 (2.28.0-2) ... Setting up libcairomm-1.0-dev:amd64 (1.12.2-4) ... Setting up libpangoxft-1.0-0:amd64 (1.42.4-6) ... Setting up imagemagick-6.q16 (8:6.9.10.14+dfsg-7ubuntu2) ... update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode Setting up libpangocairo-1.0-0:amd64 (1.42.4-6) ... Setting up libpangomm-1.4-1v5:amd64 (2.42.0-2) ... Setting up gir1.2-pango-1.0:amd64 (1.42.4-6) ... Setting up imagemagick (8:6.9.10.14+dfsg-7ubuntu2) ... Setting up libgl1:amd64 (1.1.0-1) ... Setting up libglu1-mesa:amd64 (9.0.0-2.1build1) ... Setting up libgl2ps1.4 (1.4.0+dfsg1-2) ... Setting up librsvg2-2:amd64 (2.44.10-1) ... Setting up libfltk-gl1.3:amd64 (1.3.4-7) ... Setting up pango1.0-tools (1.42.4-6) ... Setting up libglvnd-dev:amd64 (1.1.0-1) ... Setting up librsvg2-common:amd64 (2.44.10-1) ... Setting up libgl1-mesa-dev:amd64 (18.3.2-1ubuntu1) ... Setting up libqt5gui5:amd64 (5.11.3+dfsg-2ubuntu1) ... Setting up liboctave6:amd64 (4.4.1-4build1) ... Setting up libpango1.0-dev:amd64 (1.42.4-6) ... Setting up libpangox-1.0-dev (0.0.2-5) ... Setting up libpangomm-1.4-dev:amd64 (2.42.0-2) ... Setting up libglu1-mesa-dev:amd64 (9.0.0-2.1build1) ... Setting up libqt5widgets5:amd64 (5.11.3+dfsg-2ubuntu1) ... Setting up libqt5printsupport5:amd64 (5.11.3+dfsg-2ubuntu1) ... Setting up libqt5help5:amd64 (5.11.3-4) ... Setting up libqscintilla2-qt5-13 (2.10.4+dfsg-1build2) ... Setting up octave (4.4.1-4build1) ... Setting up liboctave-dev (4.4.1-4build1) ... Setting up adwaita-icon-theme (3.30.0-0ubuntu1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libgtk2.0-0:amd64 (2.24.32-3ubuntu1) ... Setting up libqtgui4:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up libqt4-designer:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up libgtkglext1:amd64 (1.2.0-9) ... Setting up libqt4-help:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up humanity-icon-theme (0.6.15) ... Setting up libgtkmm-2.4-1v5:amd64 (1:2.24.5-2) ... Setting up dh-strip-nondeterminism (1.1.0-1) ... Setting up libqt4-svg:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up libqt4-scripttools:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up gir1.2-gtk-2.0:amd64 (2.24.32-3ubuntu1) ... Setting up debhelper (12ubuntu1) ... Setting up libqt4-opengl:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up libqt4-declarative:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up libqt4-qt3support:amd64 (4:4.8.7+dfsg-7ubuntu1) ... Setting up ubuntu-mono (16.10+18.10.20181005-0ubuntu1) ... Setting up libgtk2.0-dev:amd64 (2.24.32-3ubuntu1) ... Setting up libqt4-dev-bin (4:4.8.7+dfsg-7ubuntu1) ... Setting up libgtkglext1-dev:amd64 (1.2.0-9) ... Setting up libgtkmm-2.4-dev:amd64 (1:2.24.5-2) ... Setting up libqt4-dev (4:4.8.7+dfsg-7ubuntu1) ... Setting up libqt4-opengl-dev (4:4.8.7+dfsg-7ubuntu1) ... Setting up sbuild-build-depends-mrtrix3-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Processing triggers for systemd (240-4ubuntu1) ... Processing triggers for libgdk-pixbuf2.0-0:amd64 (2.38.0+dfsg-7) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-141-generic amd64 (x86_64) Toolchain package versions: binutils_2.31.1-11ubuntu1 dpkg-dev_1.19.2ubuntu2 g++-8_8.2.0-14ubuntu1 gcc-8_8.2.0-14ubuntu1 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-14ubuntu1 libstdc++6_8.2.0-14ubuntu1 linux-libc-dev_4.19.0-11.12 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 adwaita-icon-theme_3.30.0-0ubuntu1 apt_1.8.0~alpha3.1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.45 bash_5.0-1ubuntu1 bc_1.07.1-2build1 binutils_2.31.1-11ubuntu1 binutils-common_2.31.1-11ubuntu1 binutils-x86-64-linux-gnu_2.31.1-11ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.33.1-0.1ubuntu1 build-essential_12.5ubuntu2 bzip2_1.0.6-9 ca-certificates_20180409 coreutils_8.30-1ubuntu1 cpp_4:8.2.0-2ubuntu2 cpp-8_8.2.0-14ubuntu1 dash_0.5.10.2-4ubuntu1 debconf_1.5.70 debhelper_12ubuntu1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.0-1 diffutils_1:3.6-1 dmsetup_2:1.02.145-4.1ubuntu4 dpkg_1.19.2ubuntu2 dpkg-dev_1.19.2ubuntu2 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1ubuntu1 file_1:5.35-2 findutils_4.6.0+git+20190105-2 fontconfig_2.13.0-5ubuntu3 fontconfig-config_2.13.0-5ubuntu3 fonts-dejavu-core_2.37-1 g++_4:8.2.0-2ubuntu2 g++-8_8.2.0-14ubuntu1 gcc_4:8.2.0-2ubuntu2 gcc-8_8.2.0-14ubuntu1 gcc-8-base_8.2.0-14ubuntu1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gfortran_4:8.2.0-2ubuntu2 gfortran-8_8.2.0-14ubuntu1 gir1.2-atk-1.0_2.30.0-2 gir1.2-freedesktop_1.58.3-2 gir1.2-gdkpixbuf-2.0_2.38.0+dfsg-7 gir1.2-glib-2.0_1.58.3-2 gir1.2-gtk-2.0_2.24.32-3ubuntu1 gir1.2-harfbuzz-0.0_2.3.0-1 gir1.2-pango-1.0_1.42.4-6 gpg_2.2.12-1ubuntu2 gpg-agent_2.2.12-1ubuntu2 gpgconf_2.2.12-1ubuntu2 gpgv_2.2.12-1ubuntu2 grep_3.3-1 groff-base_1.22.4-2 gtk-update-icon-cache_3.24.4-1ubuntu1 gzip_1.9-3 hdf5-helpers_1.10.4+repack-9 hicolor-icon-theme_0.17-2 hostname_3.21 humanity-icon-theme_0.6.15 icu-devtools_63.1-5 imagemagick_8:6.9.10.14+dfsg-7ubuntu2 imagemagick-6-common_8:6.9.10.14+dfsg-7ubuntu2 imagemagick-6.q16_8:6.9.10.14+dfsg-7ubuntu2 init_1.56+nmu1 init-system-helpers_1.56+nmu1 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.5 libacl1_2.2.52-3build1 libaec-dev_1.0.2-1 libaec0_1.0.2-1 libamd2_1:5.4.0+dfsg-1 libapparmor1_2.12-4ubuntu10 libapt-pkg5.0_1.8.0~alpha3.1 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.2 libarpack2_3.7.0-1 libasan5_8.2.0-14ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-2.1 libasound2_1.1.7-2ubuntu0.1 libasound2-data_1.1.7-2ubuntu0.1 libassuan0_2.5.2-1 libatk1.0-0_2.30.0-2 libatk1.0-data_2.30.0-2 libatk1.0-dev_2.30.0-2 libatkmm-1.6-1v5_2.28.0-2 libatkmm-1.6-dev_2.28.0-2 libatomic1_8.2.0-14ubuntu1 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| +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Wed Jan 23 02:48:32 2019 UTC gpgv: using RSA key C5B905F0E8D9FD9668FF366FA2DE235062DA33FA gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3.dsc dpkg-source: info: extracting mrtrix3 in mrtrix3-3.0~rc3+git135-g2b8e7d0c2 dpkg-source: info: unpacking mrtrix3_3.0~rc3+git135-g2b8e7d0c2.orig.tar.gz dpkg-source: info: unpacking mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying up_blend_python dpkg-source: info: applying changeset_7fb509cf35d5862f073faaa7e136e987486960d9.diff dpkg-source: info: applying changeset_1c1d3304791bd029bca744ff6634bfa4824f6938.diff dpkg-source: info: applying deb_run_tests dpkg-source: info: applying debian_build_cfg Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-16312507 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-16312507 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-16312507 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package mrtrix3 dpkg-buildpackage: info: source version 3.0~rc3+git135-g2b8e7d0c2-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' ./build clean find . -name '*.pyc' -delete rm clean \ config configure.log build.log \ core/version.cpp lib/mrtrix3/_version.py src/exec_version.cpp rm: cannot remove 'clean': No such file or directory rm: cannot remove 'config': No such file or directory rm: cannot remove 'configure.log': No such file or directory rm: cannot remove 'core/version.cpp': No such file or directory rm: cannot remove 'lib/mrtrix3/_version.py': No such file or directory rm: cannot remove 'src/exec_version.cpp': No such file or directory make[1]: [debian/rules:69: override_dh_clean] Error 1 (ignored) dh_clean make[1]: Leaving directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' debian/rules build make: 'build' is up to date. fakeroot debian/rules binary dh binary dh_update_autotools_config debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' ./configure -openmp # -debug MRtrix build type requested: release version with openmp Detecting OS: linux Looking for compiler [clang++]: not found Looking for compiler [g++]: g++ (Ubuntu 8.2.0-14ubuntu1) 8.2.0 Checking for C++11 compliance: ok Checking shared library generation: ok Detecting pointer size: 64 bit Detecting byte order: little-endian Checking for variable-length array support: ok Checking for non-POD variable-length array support: ok Checking for ::max_align_t: 16 bytes Checking for std::max_align_t: 16 bytes Checking for Eigen3 library: 3.3.7 Checking for zlib compression library: 1.2.11 Checking for "JSON for Modern C++" requirements: ok Checking for TIFF library: not found - TIFF support disabled Checking for FFTW library: fftw-3.3.8-sse2-avx Checking for OpenMP support: ok Checking for Qt moc: moc (version 4.8.7) Checking for Qt qmake: qmake (version 4.8.7) Checking for Qt rcc: rcc (version 4.8.7) Checking for Qt: 4.8.7 writing configuration to file './config': ok make[1]: Leaving directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' debian/rules override_dh_auto_build make[1]: Entering directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' ./build -verbose active config is default reading configuration from "config"... getting git version in folder "."... not found getting git version in folder "."... not found version file "./core/version.cpp" is out of date - updating getting git version in folder "."... not found version file "./src/exec_version.cpp" is out of date - updating compiling TODO list... building targets: bin/fixelcrop bin/mrdegibbs bin/tckglobal bin/label2mesh bin/meshfilter bin/mesh2voxel bin/mrclusterstats bin/shconv bin/mrmath bin/dwinormalise bin/fixel2voxel bin/mrcalc bin/5ttedit bin/fod2fixel bin/warpinit bin/fixelreorient bin/tsfsmooth bin/mtnormalise bin/dirflip bin/sh2peaks bin/tsfdivide bin/5tt2gmwmi bin/tckinfo bin/dirgen bin/tsfthreshold bin/connectomestats bin/dwi2adc bin/tsfinfo bin/fixelcfestats bin/mredit bin/tck2connectome bin/tckdfc bin/shview bin/mrthreshold bin/fixelconvert bin/amp2response bin/tckconvert bin/shbasis bin/dwi2fod bin/tsfvalidate bin/tcksample bin/tckresample bin/tensor2metric bin/tcksift2 bin/meshconvert bin/mrinfo bin/dcminfo bin/maskfilter bin/afdconnectivity bin/mrtransform bin/warpinvert bin/dwi2mask bin/mrcheckerboardmask bin/mrcat bin/fixel2sh bin/mrhistmatch bin/fixelcorrespondence bin/tckgen bin/mrfilter bin/mrdump bin/dirstat bin/warpcorrect bin/mraverageheader bin/connectome2tck bin/mrhistogram bin/fixel2tsf bin/dwidenoise bin/mrmetric bin/transformcalc bin/mrpad bin/sh2amp bin/voxel2mesh bin/tcksift bin/tckstats bin/mrstats bin/amp2sh bin/mrconvert bin/mrresize bin/dirsplit bin/label2colour bin/tsfmult bin/voxel2fixel bin/dwiextract bin/transformconvert bin/vectorstats bin/sh2power bin/sh2response bin/dirorder bin/tckedit bin/tck2fixel bin/5tt2vis bin/fod2dec bin/5ttcheck bin/maskdump bin/tcktransform bin/peaks2amp bin/transformcompose bin/mrcrop bin/warpconvert bin/tckmap bin/labelconvert bin/dwi2tensor bin/warp2metric bin/dcmedit bin/mrregister bin/dirmerge bin/mrview TODO list contains 505 items launching 4 threads g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/labelconvert.cpp -o tmp/cmd/labelconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/directions/file.cpp -o tmp/src/dwi/directions/file.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/tracking/method.cpp -o tmp/src/dwi/tractography/tracking/method.o moc src/gui/opengl/lighting.h -o tmp/src/gui/opengl/lighting_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcalc.cpp -o tmp/cmd/mrcalc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/version.cpp -o tmp/core/version.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/projection.cpp -o tmp/src/gui/projection.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrdump.cpp -o tmp/cmd/mrdump.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/tree.cpp -o tmp/core/file/dicom/tree.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/transform/rigid.cpp -o tmp/src/registration/transform/rigid.o moc src/gui/shview/render_window.h -o tmp/src/gui/shview/render_window_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/upsampler.cpp -o tmp/src/dwi/tractography/resampling/upsampler.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirstat.cpp -o tmp/cmd/dirstat.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/shapes/cylinder.cpp -o tmp/src/gui/shapes/cylinder.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrconvert.cpp -o tmp/cmd/mrconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/mapper.cpp -o tmp/src/dwi/tractography/mapping/mapper.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwiextract.cpp -o tmp/cmd/dwiextract.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/directions/set.cpp -o tmp/src/dwi/directions/set.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/dict.cpp -o tmp/core/file/dicom/dict.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/app.cpp -o tmp/core/app.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/twi_stats.cpp -o tmp/src/dwi/tractography/mapping/twi_stats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfmult.cpp -o tmp/cmd/tsfmult.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warpinvert.cpp -o tmp/cmd/warpinvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/xds.cpp -o tmp/core/formats/xds.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with 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-Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include cmd/mrview.cpp -o tmp/cmd/mrview.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2amp.cpp -o tmp/cmd/sh2amp.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/nifti1_utils.cpp -o tmp/core/file/nifti1_utils.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/fixed_num_points.cpp -o tmp/src/dwi/tractography/resampling/fixed_num_points.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. 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-o tmp/src/gui/dialog/image_properties_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/maskdump.cpp -o tmp/cmd/maskdump.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/meshfilter.cpp -o tmp/cmd/meshfilter.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/dialog/report_exception.cpp -o tmp/src/gui/dialog/report_exception.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/editing/editing.cpp -o tmp/src/dwi/tractography/editing/editing.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/5ttcheck.cpp -o tmp/cmd/5ttcheck.o rcc icons/shview.qrc -o tmp/src/gui/shview/icons.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/particlegrid.cpp -o tmp/src/dwi/tractography/GT/particlegrid.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/dialog/dialog.cpp -o tmp/src/gui/dialog/dialog.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/endpoints.cpp -o tmp/src/dwi/tractography/resampling/endpoints.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrdegibbs.cpp -o tmp/cmd/mrdegibbs.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/filter/smooth.cpp -o tmp/src/surface/filter/smooth.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/rng.cpp -o tmp/src/dwi/tractography/rng.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/tckfactor.cpp -o tmp/src/dwi/tractography/SIFT2/tckfactor.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/displayable.cpp -o tmp/src/gui/mrview/displayable.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/shview/render_window_moc.cpp -o tmp/src/gui/shview/render_window_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/connectome/matrix.cpp -o tmp/src/dwi/tractography/connectome/matrix.o moc src/gui/mrview/mode/lightbox.h -o tmp/src/gui/mrview/mode/lightbox_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/connectome/extract.cpp -o tmp/src/dwi/tractography/connectome/extract.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/colourmap_button.cpp -o tmp/src/gui/mrview/colourmap_button.o ( 1/505) [CC] tmp/cmd/labelconvert.o ( 3/505) [CC] tmp/src/dwi/directions/file.o ( 2/505) [CC] tmp/src/dwi/tractography/tracking/method.o ( 4/505) [MOC] tmp/src/gui/opengl/lighting_moc.cpp ( 5/505) [CC] tmp/cmd/mrcalc.o ( 6/505) [CC] tmp/core/version.o ( 7/505) [CC] tmp/src/gui/projection.o ( 8/505) [CC] tmp/cmd/mrdump.o ( 9/505) [CC] tmp/core/file/dicom/tree.o ( 10/505) [CC] tmp/src/registration/transform/rigid.o ( 11/505) [MOC] tmp/src/gui/shview/render_window_moc.cpp ( 12/505) [CC] tmp/src/dwi/tractography/resampling/upsampler.o ( 13/505) [CC] tmp/cmd/dirstat.o ( 14/505) [CC] tmp/src/gui/shapes/cylinder.o ( 15/505) [CC] tmp/cmd/mrconvert.o ( 16/505) [CC] tmp/src/dwi/tractography/mapping/mapper.o ( 17/505) [CC] tmp/cmd/dwiextract.o ( 18/505) [CC] 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[CC] tmp/core/formats/nifti2_gz.o ( 62/505) [CC] tmp/src/stats/tfce.o ( 63/505) [CC] tmp/cmd/mrhistogram.o ( 64/505) [CC] tmp/cmd/mrview.o ( 65/505) [CC] tmp/cmd/sh2amp.o ( 66/505) [CC] tmp/core/file/nifti1_utils.o ( 67/505) [CC] tmp/src/dwi/tractography/resampling/fixed_num_points.o ( 68/505) [CC] tmp/core/formats/dicom.o ( 69/505) [CC] tmp/src/gui/dialog/image_properties_moc.o ( 70/505) [CC] tmp/cmd/maskdump.o ( 71/505) [CC] tmp/cmd/meshfilter.o ( 72/505) [CC] tmp/src/gui/dialog/report_exception.o ( 73/505) [CC] tmp/src/dwi/tractography/editing/editing.o ( 74/505) [CC] tmp/cmd/5ttcheck.o ( 75/505) [RCC] tmp/src/gui/shview/icons.cpp ( 76/505) [CC] tmp/src/dwi/tractography/GT/particlegrid.o ( 77/505) [CC] tmp/src/gui/dialog/dialog.o ( 78/505) [CC] tmp/src/dwi/tractography/resampling/endpoints.o ( 79/505) [CC] tmp/cmd/mrdegibbs.o ( 80/505) [CC] tmp/src/surface/filter/smooth.o ( 81/505) [CC] tmp/src/dwi/tractography/rng.o ( 82/505) [CC] tmp/src/dwi/tractography/SIFT2/tckfactor.o ( 83/505) [CC] tmp/src/gui/mrview/displayable.o ( 84/505) [CC] tmp/src/gui/shview/render_window_moc.o ( 85/505) [CC] tmp/src/dwi/tractography/connectome/matrix.o ( 86/505) [MOC] tmp/src/gui/mrview/mode/lightbox_moc.cpp ( 87/505) [CC] tmp/src/dwi/tractography/connectome/extract.o ( 88/505) [CC] tmp/src/gui/mrview/colourmap_button.o ( 89/g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem 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-o tmp/src/gui/opengl/lighting_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckinfo.cpp -o tmp/cmd/tckinfo.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/permstack.cpp -o tmp/src/stats/permstack.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. 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tmp/src/gui/mrview/tool/odf/model.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/series.cpp -o tmp/core/file/dicom/series.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckglobal.cpp -o tmp/cmd/tckglobal.o moc src/gui/mrview/combo_box_error.h -o tmp/src/gui/mrview/combo_box_error_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" 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tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp -o tmp/src/gui/mrview/tool/fixel/fixel_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. 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/usr/include/eigen3 core/image_io/scratch.cpp -o tmp/core/image_io/scratch.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/shells.cpp -o tmp/src/dwi/shells.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dcmedit.cpp -o tmp/cmd/dcmedit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 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-fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/mode/ortho_moc.cpp -o tmp/src/gui/mrview/mode/ortho_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelreorient.cpp -o tmp/cmd/fixelreorient.o moc src/gui/mrview/colourmap_button.h -o tmp/src/gui/mrview/colourmap_button_moc.cpp g++ -c 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-isystem /usr/include/eigen3 cmd/label2colour.cpp -o tmp/cmd/label2colour.o moc src/gui/mrview/displayable.h -o tmp/src/gui/mrview/displayable_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/displayable_moc.cpp -o tmp/src/gui/mrview/displayable_moc.o ] tmp/src/registration/transform/initialiser_helpers.o (180/505) [CC] 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tmp/src/gui/mrview/displayable_moc.o (267/505) [CC] tmg++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrtransform.cpp -o tmp/cmd/mrtransform.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore 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-DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcat.cpp -o tmp/cmd/mrcat.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/odf/odf_moc.cpp -o tmp/src/gui/mrview/tool/odf/odf_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/label2mesh.cpp -o tmp/cmd/label2mesh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/internalenergy.cpp -o tmp/src/dwi/tractography/GT/internalenergy.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/study.cpp -o tmp/core/file/dicom/study.o moc src/gui/color_button.h -o tmp/src/gui/color_button_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mraverageheader.cpp -o tmp/cmd/mraverageheader.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/connectome/connectome.cpp -o tmp/src/dwi/tractography/connectome/connectome.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixel2sh.cpp -o tmp/cmd/fixel2sh.o moc src/gui/lighting_dock.h -o tmp/src/gui/lighting_dock_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/lighting_dock_moc.cpp -o tmp/src/gui/lighting_dock_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/mhsampler.cpp -o tmp/src/dwi/tractography/GT/mhsampler.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security 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-DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp -o tmp/src/gui/mrview/tool/tractography/tractogram_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/nifti2.cpp -o tmp/core/formats/nifti2.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/opengl/font.cpp -o tmp/src/gui/opengl/font.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwinormalise.cpp -o tmp/cmd/dwinormalise.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/polygon.cpp -o tmp/src/surface/polygon.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/shbasis.cpp -o tmp/cmd/shbasis.o p/cmd/mrtransform.o (268/505) [CC] tmp/src/gui/mrview/mode/lightbox_moc.o (269/505) [CC] tmp/src/gui/mrview/combo_box_error_moc.o (270/505) [CC] tmp/src/gui/mrview/colourmap_button_moc.o (271/505) [CC] 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(311/505) [CC] tmp/src/gui/mrview/tool/connectome/selection.o (312/505) [CC] tmp/cmd/dirmerge.o (313/505) [CC] tmp/core/formats/ram.o (314/505) [CC] tmp/core/thread.o (315/505) [CC] tmp/core/file/nifti_utils.o (316/505) [CC] tmp/src/gui/dialog/file.o (317/505) [CC] tmp/cmd/tensor2metric.o (318/505) [CC] tmp/cmd/voxel2mesh.o (319/505) [CC] tmp/src/gui/mrview/tool/fixel/directory.o (320/505) [MOC] tmp/src/gui/gui_moc.cpp (321/505) [CC] tmp/src/gui/gui_moc.o (322/505) [CC] tmp/cmd/warp2metric.o (323/505) [CC] tmp/core/formats/pipe.o (324/505) [CC] tmp/src/dwi/tractography/SIFT2/fixel_updater.o (325/505) [CC] tmp/cmd/sh2peaks.o (326/505) [CC] tmp/src/gui/mrview/tool/tractography/tractogram.o (327/505) [CC] tmp/cmd/afdconnectivity.o (328/505) [CC] tmp/core/formats/mrtrix_utils.o (329/505) [CC] tmp/cmd/transformconvert.o (330/505) [CC] tmp/cmd/mrpad.o (331/505) [CC] tmp/cmd/fod2dec.o (332/505) [CC] tmp/src/stats/cfe.o (333/505) [CC] tmp/cmd/mrinfo.o (334/505) [CC] 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-DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/vectorstats.cpp -o tmp/cmd/vectorstats.o moc src/gui/mrview/spin_box.h -o tmp/src/gui/mrview/spin_box_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/spin_box_moc.cpp -o tmp/src/gui/mrview/spin_box_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/connectome2tck.cpp -o tmp/cmd/connectome2tck.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/peaks2amp.cpp -o tmp/cmd/peaks2amp.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/gz.cpp -o tmp/core/image_io/gz.o moc src/gui/mrview/window.h -o tmp/src/gui/mrview/window_moc.cpp g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/mrview/window_moc.cpp -o tmp/src/gui/mrview/window_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/quick_scan.cpp -o tmp/core/file/dicom/quick_scan.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/mrview/tool/fixel/image4D.cpp -o tmp/src/gui/mrview/tool/fixel/image4D.o g++ tmp/core/exception.o tmp/core/math/stats/glm.o tmp/core/formats/mgz.o tmp/core/file/json_utils.o tmp/core/stride.o tmp/core/file/dicom/dict.o tmp/core/file/mmap.o tmp/core/formats/pipe.o tmp/core/formats/mrtrix_gz.o tmp/core/image_io/scratch.o tmp/core/math/stats/permutation.o tmp/core/formats/mri.o tmp/core/image_io/fetch_store.o tmp/core/image_io/pipe.o tmp/core/formats/nifti1_gz.o tmp/core/formats/mgh.o tmp/core/formats/nifti2.o tmp/core/math/average_space.o tmp/core/version.o tmp/core/file/dicom/patient.o tmp/core/file/mgh.o tmp/core/file/dicom/element.o tmp/core/formats/mrtrix_utils.o tmp/core/formats/nifti1.o tmp/core/formats/analyse.o tmp/core/algo/histogram.o tmp/core/file/dicom/tree.o tmp/core/file/nifti2_utils.o tmp/core/formats/nifti2_gz.o tmp/core/axes.o tmp/core/signal_handler.o tmp/core/file/dicom/mapper.o tmp/core/formats/ram.o tmp/core/adapter/reslice.o tmp/core/math/bessel.o tmp/core/file/tiff.o tmp/core/file/nifti1_utils.o tmp/core/datatype.o tmp/core/header.o tmp/core/formats/mrtrix.o tmp/core/image_io/mosaic.o tmp/core/file/dicom/select_cmdline.o tmp/core/formats/list.o tmp/core/image_io/sparse.o tmp/core/phase_encoding.o tmp/core/mrtrix.o tmp/core/file/name_parser.o tmp/core/image_io/ram.o tmp/core/file/dicom/study.o tmp/core/file/key_value.o tmp/core/image_io/base.o tmp/core/app.o tmp/core/file/config.o tmp/core/thread.o tmp/core/formats/dicom.o tmp/core/image_io/gz.o tmp/core/progressbar.o tmp/core/image_io/tiff.o tmp/core/file/nifti_utils.o tmp/core/bitset.o tmp/core/stats.o tmp/core/math/SH.o tmp/core/file/dicom/quick_scan.o tmp/core/formats/xds.o tmp/core/image_io/default.o tmp/core/file/ofstream.o tmp/core/formats/tiff.o tmp/core/formats/mrtrix_sparse_legacy.o tmp/core/file/dicom/series.o tmp/core/file/dicom/image.o -shared -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -o lib/libmrtrix.so g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include src/gui/opengl/gl_core_3_3.cpp -o tmp/src/gui/opengl/gl_core_3_3.o g++ tmp/src/exec_version.o tmp/cmd/transformcompose.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/transformcompose g++ tmp/src/dwi/directions/file.o tmp/cmd/dirorder.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirorder g++ tmp/cmd/dirgen.o tmp/src/dwi/directions/file.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirgen g++ tmp/cmd/peaks2amp.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/peaks2amp g++ tmp/src/connectome/lut.o tmp/cmd/meshconvert.o tmp/src/surface/scalar.o tmp/src/surface/mesh.o tmp/src/surface/freesurfer.o tmp/src/surface/filter/base.o tmp/src/surface/filter/vertex_transform.o tmp/src/exec_version.o tmp/src/surface/polygon.o tmp/src/connectome/connectome.o tmp/src/surface/mesh_multi.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/meshconvert g++ tmp/cmd/mrdump.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrdump g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/cmd/tck2fixel.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tck2fixel g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/properties.o tmp/cmd/afdconnectivity.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/afdconnectivity g++ tmp/cmd/mrstats.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrstats g++ tmp/cmd/warpconvert.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpconvert g++ tmp/cmd/sh2power.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2power g++ tmp/src/exec_version.o tmp/cmd/mrhistmatch.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrhistmatch g++ tmp/cmd/mrthreshold.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrthreshold g++ tmp/src/dwi/directions/predefined.o tmp/cmd/fod2dec.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fod2dec g++ tmp/cmd/mrpad.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrpad g++ tmp/cmd/shbasis.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/shbasis g++ tmp/cmd/warp2metric.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warp2metric g++ tmp/src/exec_version.o tmp/cmd/fixel2sh.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2sh g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/cmd/tsfthreshold.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfthreshold g++ tmp/src/connectome/connectome.o tmp/src/connectome/lut.o tmp/cmd/labelconvert.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/labelconvert g++ tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o tmp/cmd/mrmath.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrmath g++ tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o tmp/cmd/dwi2adc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2adc g++ tmp/cmd/mrcat.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcat g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/tckconvert.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckconvert g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/cmd/fixel2voxel.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2voxel g++ tmp/cmd/transformcalc.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/transformcalc g++ tmp/cmd/maskfilter.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/maskfilter g++ tmp/cmd/warpinvert.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpinvert g++ tmp/cmd/mrcalc.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcalc g++ tmp/src/connectome/lut.o tmp/src/surface/scalar.o tmp/src/surface/mesh.o tmp/src/surface/freesurfer.o tmp/src/surface/filter/base.o tmp/src/surface/filter/smooth.o tmp/src/exec_version.o tmp/src/surface/polygon.o tmp/cmd/meshfilter.o tmp/src/surface/mesh_multi.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/meshfilter g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/5ttcheck.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5ttcheck g++ tmp/src/dwi/tractography/roi.o tmp/cmd/5tt2vis.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5tt2vis g++ tmp/cmd/mrfilter.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrfilter g++ tmp/cmd/maskdump.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/maskdump g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/cmd/fixel2tsf.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2tsf g++ tmp/src/dwi/directions/file.o tmp/cmd/dirmerge.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirmerge g++ tmp/src/stats/permtest.o tmp/cmd/vectorstats.o tmp/src/stats/permstack.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/vectorstats g++ tmp/cmd/dirstat.o tmp/src/dwi/directions/file.o tmp/src/dwi/shells.o tmp/src/exec_version.o tmp/src/dwi/gradient.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirstat g++ tmp/src/exec_version.o tmp/cmd/warpinit.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpinit g++ tmp/src/exec_version.o tmp/cmd/voxel2fixel.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/voxel2fixel g++ tmp/cmd/mredit.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mredit g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tsfsmooth.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfsmooth g++ tmp/src/dwi/directions/predefined.o tmp/cmd/fod2fixel.o tmp/src/exec_version.o tmp/src/dwi/directions/mask.o tmp/src/dwi/directions/set.o tmp/src/dwi/fmls.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fod2fixel g++ tmp/src/dwi/gradient.o tmp/cmd/mrconvert.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrconvert g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/cmd/tckdfc.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckdfc g++ tmp/src/dwi/directions/file.o tmp/src/exec_version.o tmp/cmd/dirflip.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirflip g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/weights.o tmp/cmd/tckstats.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckstats g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/dwi/directions/set.o tmp/src/stats/cfe.o tmp/src/stats/permtest.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/properties.o tmp/cmd/fixelcfestats.o tmp/src/stats/permstack.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelcfestats g++ tmp/cmd/mrtransform.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrtransform g++ tmp/cmd/fixelcorrespondence.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelcorrespondence g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/5ttedit.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5ttedit g++ tmp/src/connectome/lut.o tmp/src/surface/scalar.o tmp/src/surface/mesh.o tmp/src/surface/freesurfer.o tmp/cmd/label2mesh.o tmp/src/exec_version.o tmp/src/surface/polygon.o tmp/src/connectome/connectome.o tmp/src/surface/mesh_multi.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/label2mesh g++ tmp/src/exec_version.o tmp/cmd/dcmedit.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dcmedit g++ tmp/src/exec_version.o tmp/cmd/mrdegibbs.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrdegibbs g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/cmd/tsfvalidate.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfvalidate g++ tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o tmp/cmd/amp2response.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/amp2response g++ tmp/src/connectome/lut.o tmp/src/surface/scalar.o tmp/src/surface/mesh.o tmp/cmd/mesh2voxel.o tmp/src/surface/freesurfer.o tmp/src/surface/filter/vertex_transform.o tmp/src/exec_version.o tmp/src/surface/polygon.o tmp/src/surface/filter/base.o tmp/src/connectome/connectome.o tmp/src/surface/mesh_multi.o tmp/src/surface/algo/mesh2image.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mesh2voxel g++ tmp/src/connectome/lut.o tmp/src/surface/scalar.o tmp/src/surface/mesh.o tmp/src/surface/freesurfer.o tmp/src/exec_version.o tmp/src/surface/polygon.o tmp/cmd/voxel2mesh.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/voxel2mesh g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tckinfo.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckinfo g++ tmp/cmd/fixelconvert.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelconvert g++ tmp/cmd/label2colour.o tmp/src/connectome/lut.o tmp/src/connectome/connectome.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/label2colour g++ tmp/cmd/mtnormalise.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mtnormalise g++ tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o tmp/cmd/dwiextract.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwiextract g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/SIFT/gradient_sort.o tmp/src/dwi/tractography/mapping/mapper.o tmp/cmd/tcksift.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/SIFT/track_contribution.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/SIFT/track_index_range.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/SIFT/sift.o tmp/src/dwi/tractography/SIFT/sifter.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcksift g++ tmp/src/dwi/directions/file.o tmp/cmd/dirsplit.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirsplit g++ tmp/src/dwi/gradient.o tmp/cmd/sh2response.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2response g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/shells.o tmp/src/dwi/tractography/GT/gt.o tmp/src/dwi/tractography/GT/particle.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tckglobal.o tmp/src/dwi/gradient.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/GT/mhsampler.o tmp/src/dwi/tractography/GT/externalenergy.o tmp/src/exec_version.o tmp/src/dwi/tractography/GT/internalenergy.o tmp/src/dwi/tractography/GT/particlegrid.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/rng.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckglobal g++ tmp/cmd/fixelcrop.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelcrop g++ tmp/cmd/transformconvert.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/transformconvert g++ tmp/cmd/mrhistogram.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrhistogram 54/505) [CC] tmp/cmd/dwi2mask.o (355/505) [CC] tmp/src/gui/mrview/tool/roi_editor/model.o (356/505) [CC] tmp/core/math/bessel.o (357/505) [CC] tmp/src/gui/mrview/tool/connectome/edge.o (358/505) [CC] tmp/src/gui/mrview/tool/odf/preview.o (359/505) [CC] tmp/src/gui/mrview/tool/roi_editor/roi_moc.o (360/505) [CC] tmp/src/dwi/sdeconv/csd.o (361/505) [CC] tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o (362/505) [CC] tmp/src/connectome/connectome.o (363/505) [CC] tmp/src/gui/dialog/opengl.o (364/505) [CC] tmp/core/formats/mrtrix_gz.o (365/505) [CC] tmp/core/image_io/default.o (366/505) [CC] tmp/src/dwi/tractography/mapping/voxel.o (367/505) [CC] tmp/cmd/dwi2tensor.o (368/505) [CC] tmp/cmd/fixelcfestats.o (369/505) [CC] tmp/core/file/dicom/image.o (370/505) [CC] tmp/src/gui/mrview/tool/connectome/connectome_moc.o (371/505) [CC] tmp/src/gui/mrview/mode/lightbox.o (372/505) [CC] tmp/src/registration/transform/affine.o (373/505) [CC] tmp/cmd/dwidenoise.o (374/505) [CC] tmp/src/gui/mrview/tool/view.o (375/505) [CC] tmp/cmd/dirorder.o (376/505) [CC] tmp/src/gui/mrview/mode/base.o (377/505) [CC] tmp/src/dwi/tractography/resampling/resampling.o (378/505) [CC] tmp/core/image_io/base.o (379/505) [CC] tmp/cmd/fod2fixel.o (380/505) [CC] tmp/cmd/amp2sh.o (381/505) [CC] tmp/cmd/mredit.o (382/505) [CC] tmp/src/stats/cluster.o (383/505) [CC] tmp/src/gui/mrview/tool/view_moc.o (384/505) [MOC] tmp/src/gui/mrview/adjust_button_moc.cpp (385/505) [CC] tmp/src/gui/mrview/adjust_button_moc.o (386/505) [CC] tmp/cmd/vectorstats.o (387/505) [MOC] tmp/src/gui/mrview/spin_box_moc.cpp (388/505) [CC] tmp/src/gui/mrview/spin_box_moc.o (389/505) [CC] tmp/cmd/connectome2tck.o (390/505) [CC] tmp/cmd/peaks2amp.o (391/505) [CC] tmp/core/image_io/gz.o (392/505) [MOC] tmp/src/gui/mrview/window_moc.cpp (393/505) [CC] tmp/src/gui/mrview/window_moc.o (394/505) [CC] tmp/core/file/dicom/quick_scan.o (395/505) [CC] tmp/src/gui/mrview/tool/fixel/image4D.o (396/505) [LD] lib/libmrtrix.so (397/505) [CC] tmp/src/gui/opengl/gl_core_3_3.o (398/505) [LB] bin/transformcompose (399/505) [LB] bin/dirorder (400/505) [LB] bin/dirgen (401/505) [LB] bin/peaks2amp (402/505) [LB] bin/meshconvert (403/505) [LB] bin/mrdump (404/505) [LB] bin/tck2fixel (405/505) [LB] bin/afdconnectivity (406/505) [LB] bin/mrstats (407/505) [LB] bin/warpconvert (408/505) [LB] bin/sh2power (409/505) [LB] bin/mrhistmatch (410/505) [LB] bin/mrthreshold (411/505) [LB] bin/fod2dec (412/505) [LB] bin/mrpad (413/505) [LB] bin/shbasis (414/505) [LB] bin/warp2metric (415/505) [LB] bin/fixel2sh (416/505) [LB] bin/tsfthreshold (417/505) [LB] bin/labelconvert (418/505) [LB] bin/mrmath (419/505) [LB] bin/dwi2adc (420/505) [LB] bin/mrcat (421/505) [LB] bin/tckconvert (422/505) [LB] bin/fixel2voxel (423/505) [LB] bin/transformcalc (424/505) [LB] bin/maskfilter (425/505) [LB] bin/warpinvert (426/505) [LB] bin/mrcalc (427/505) [LB] bin/meshfilter (428/505) [LB] bin/5ttcheck (429/505) [LB] bin/5tt2vis (430/505) [LB] bin/mrfilter (431/505) [LB] bin/maskdump (432/505) [LB] bin/fixel2tsf (433/505) [LB] bin/dirmerge (434/505) [LB] bin/vectorstats (435/505) [LB] bin/dirstat (436/505) [LB] bin/warpinit (437/505) [LB] bin/voxel2fixel (438/505) [LB] bin/mredit (439/505) [LB] bin/tsfsmooth (440/505) [LB] bin/fod2fixel (441/505) [LB] bin/mrconvert (442/505) [LB] bin/tckdfc (443/505) [LB] bin/dirflip (444/505) [LB] bin/tckstats (445/505) [LB] bin/fixelcfestats (446/505) [LB] bin/mrtransform (447/505) [LB] bin/fixelcorrespondence (448/505) [LB] bin/5ttedit (449/505) [LB] bin/label2mesh (450/505) [LB] bin/dcmedit (451/505) [LB] bin/mrdegibbs (452/505) [LB] bin/tsfvalidate (453/505) [LB] bin/amp2response (454/505) [LB] bin/mesh2voxel (455/505) [LB] bin/voxel2mesh (456/505) [LB] bin/tckinfo (457/505) [LB] bin/fixelconvert (458/505) [LB] bin/label2colour (459/505) [LB] bin/mtnormalise (460/505) [LB] bin/dwiextract (461/505) [LB] bin/tcksift (462/505) [LB] bin/dirsplit (463/505) [LB] bin/sh2response (464/505) [LB] bin/tckglobal (465/505) [LB] bin/fixelcrop (466/505) [LB] bin/transformconvert (467/505) [LB] bin/mrhistogram (468/505) [LB] g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/tsfmult.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfmult g++ tmp/cmd/dwinormalise.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwinormalise g++ tmp/cmd/mrresize.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrresize g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/arc.o tmp/cmd/tckresample.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/resampling/endpoints.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckresample g++ tmp/cmd/mrcrop.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcrop g++ tmp/src/registration/transform/initialiser_helpers.o tmp/src/exec_version.o tmp/src/registration/transform/initialiser.o tmp/cmd/mraverageheader.o tmp/src/registration/transform/rigid.o tmp/src/registration/transform/convergence_check.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mraverageheader g++ tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/cmd/mrinfo.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrinfo g++ tmp/cmd/dwi2tensor.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2tensor g++ tmp/cmd/dwidenoise.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwidenoise g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/SIFT2/fixel_updater.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/SIFT/track_contribution.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/SIFT2/streamline_stats.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/SIFT/sift.o tmp/src/dwi/tractography/SIFT2/line_search.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/SIFT2/tckfactor.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/SIFT2/reg_calculator.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/cmd/tcksift2.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/SIFT/track_index_range.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcksift2 g++ tmp/src/dwi/directions/predefined.o tmp/src/dwi/sdeconv/csd.o tmp/src/dwi/shells.o tmp/src/exec_version.o tmp/cmd/dwi2fod.o tmp/src/dwi/gradient.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2fod g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/shells.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/gaussian/mapper.o tmp/src/dwi/tractography/resampling/resampling.o tmp/cmd/tckmap.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/gradient.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/weights.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckmap g++ tmp/cmd/amp2sh.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/amp2sh g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/cmd/tsfinfo.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfinfo g++ tmp/cmd/mrcheckerboardmask.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcheckerboardmask g++ tmp/src/stats/tfce.o tmp/src/stats/permtest.o tmp/cmd/connectomestats.o tmp/src/exec_version.o tmp/src/connectome/connectome.o tmp/src/connectome/enhance.o tmp/src/stats/permstack.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/connectomestats g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/cmd/tsfdivide.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfdivide g++ tmp/cmd/tensor2metric.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tensor2metric g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/connectome/extract.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/connectome/connectome.o tmp/src/dwi/tractography/connectome/exemplar.o tmp/src/dwi/tractography/connectome/connectome.o tmp/src/dwi/tractography/weights.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/connectome/tck2nodes.o tmp/cmd/connectome2tck.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/connectome2tck g++ tmp/src/registration/linear.o tmp/src/exec_version.o tmp/src/registration/transform/affine.o tmp/src/registration/transform/initialiser.o tmp/src/registration/nonlinear.o tmp/src/dwi/directions/predefined.o tmp/cmd/mrregister.o tmp/src/registration/transform/initialiser_helpers.o tmp/src/registration/transform/rigid.o tmp/src/registration/transform/convergence_check.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrregister g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/connectome/connectome.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/connectome/connectome.o tmp/src/dwi/tractography/weights.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/connectome/tck2nodes.o tmp/cmd/tck2connectome.o tmp/src/dwi/tractography/connectome/matrix.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tck2connectome g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/cmd/5tt2gmwmi.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5tt2gmwmi g++ tmp/cmd/warpcorrect.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpcorrect g++ tmp/cmd/shconv.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/shconv g++ tmp/cmd/sh2peaks.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2peaks g++ tmp/cmd/sh2amp.o tmp/src/dwi/gradient.o tmp/src/dwi/shells.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2amp g++ tmp/src/dwi/shells.o tmp/src/dwi/gradient.o tmp/cmd/dwi2mask.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2mask g++ tmp/cmd/dcminfo.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dcminfo g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tcktransform.o tmp/src/dwi/tractography/properties.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcktransform g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/cmd/tcksample.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcksample g++ tmp/src/dwi/tractography/roi.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/editing/editing.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/weights.o tmp/cmd/tckedit.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/editing/worker.o tmp/src/dwi/tractography/editing/receiver.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckedit g++ tmp/src/registration/transform/rigid.o tmp/src/registration/transform/convergence_check.o tmp/src/exec_version.o tmp/cmd/mrmetric.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrmetric g++ tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/seeding/dynamic.o tmp/src/dwi/shells.o tmp/src/dwi/tractography/ACT/gmwmi.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/tracking/method.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/tracking/shared.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/seeding/gmwmi.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/gradient.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/tracking/tractography.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/rng.o tmp/cmd/tckgen.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/tracking/early_exit.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/algorithms/iFOD2.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/dwi/tractography/seeding/seeding.o tmp/src/dwi/tractography/seeding/basic.o tmp/src/dwi/tractography/tracking/write_kernel.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckgen g++ tmp/src/stats/tfce.o tmp/src/stats/permtest.o tmp/src/stats/permstack.o tmp/src/stats/cluster.o tmp/src/exec_version.o tmp/src/dwi/directions/predefined.o tmp/cmd/mrclusterstats.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrclusterstats g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -g -O2 -fdebug-prefix-map=/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2=. -fstack-protector-strong -Wformat -Werror=format-security -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -m64 -pipe -Wall -W -D_REENTRANT -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED -isystem /usr/share/qt4/mkspecs/linux-g++-64 -isystem /usr/include/qt4/QtCore -isystem /usr/include/qt4/QtGui -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4 -isystem /usr/X11R6/include tmp/src/gui/color_button_moc.cpp -o tmp/src/gui/color_button_moc.o g++ tmp/cmd/fixelreorient.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelreorient g++ tmp/src/dwi/tractography/roi.o tmp/src/gui/dialog/progress.o tmp/src/gui/mrview/tool/tractography/track_scalar_file.o tmp/src/gui/dialog/list.o tmp/src/gui/mrview/tool/view.o tmp/src/dwi/tractography/properties.o tmp/src/surface/mesh_multi.o tmp/src/gui/mrview/tool/connectome/matrix_list.o tmp/src/gui/mrview/mode/lightbox_moc.o tmp/src/gui/mrview/tool/tractography/tractography.o tmp/src/gui/projection.o tmp/src/gui/mrview/tool/roi_editor/undoentry.o tmp/src/gui/mrview/tool/connectome/node_overlay.o tmp/src/gui/shapes/sphere.o tmp/src/gui/mrview/tool/connectome/selection_moc.o tmp/src/gui/shapes/cylinder.o tmp/src/gui/mrview/window_moc.o tmp/src/gui/mrview/tool/tractography/tractogram_moc.o tmp/src/gui/opengl/font.o tmp/src/gui/mrview/tool/odf/model.o tmp/src/gui/mrview/mode/ortho_moc.o tmp/src/dwi/gradient.o tmp/src/gui/mrview/tool/tractography/tractography_moc.o tmp/src/gui/mrview/colourmap.o tmp/src/gui/mrview/displayable_moc.o tmp/src/gui/lighting_dock.o tmp/src/surface/polygon.o tmp/src/gui/mrview/tool/fixel/image4D.o tmp/src/gui/dwi/renderer.o tmp/src/gui/opengl/shader.o tmp/src/gui/mrview/adjust_button_moc.o tmp/src/gui/mrview/combo_box_error.o tmp/src/dwi/directions/set.o tmp/src/gui/mrview/tool/connectome/edge.o tmp/src/gui/mrview/tool/odf/preview.o tmp/src/gui/mrview/tool/connectome/selection.o tmp/src/gui/mrview/tool/roi_editor/roi_moc.o tmp/src/gui/mrview/tool/fixel/fixel_moc.o tmp/src/gui/opengl/lighting.o tmp/src/gui/dialog/image_properties.o tmp/src/gui/mrview/tool/fixel/legacy.o tmp/src/gui/mrview/tool/connectome/node_list.o tmp/src/gui/mrview/tool/fixel/directory.o tmp/src/gui/shapes/halfsphere.o tmp/src/dwi/tractography/seeding/list.o tmp/src/gui/mrview/tool/tractography/tractogram.o tmp/src/gui/mrview/tool/odf/preview_moc.o tmp/src/gui/mrview/gui_image.o tmp/src/gui/dialog/image_properties_moc.o tmp/src/gui/dialog/file.o tmp/src/gui/mrview/tool/connectome/node_list_moc.o tmp/src/gui/mrview/tool/view_moc.o tmp/src/gui/mrview/tool/connectome/connectome_moc.o tmp/src/gui/mrview/tool/screen_capture_moc.o tmp/src/gui/mrview/mode/lightbox.o tmp/src/gui/mrview/window.o tmp/src/connectome/lut.o tmp/src/dwi/shells.o tmp/src/gui/lighting_dock_moc.o tmp/src/gui/mrview/combo_box_error_moc.o tmp/src/gui/mrview/colourmap_button_moc.o tmp/src/gui/mrview/tool/roi_editor/model.o tmp/src/gui/dialog/report_exception.o tmp/src/gui/dialog/opengl.o tmp/src/gui/mrview/volume.o tmp/src/gui/mrview/tool/connectome/shaders.o tmp/src/gui/dialog/dialog.o tmp/src/gui/gui_moc.o tmp/src/gui/mrview/mode/volume.o tmp/src/gui/cursor.o tmp/src/gui/mrview/mode/base.o tmp/src/connectome/connectome.o tmp/src/gui/mrview/tool/connectome/file_data_vector.o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o tmp/src/gui/opengl/lighting_moc.o tmp/src/gui/dwi/render_frame.o tmp/src/gui/mrview/tool/odf/item.o tmp/src/gui/gui.o tmp/src/dwi/tractography/rng.o tmp/src/gui/dwi/render_frame_moc.o tmp/src/gui/mrview/icons.o tmp/src/gui/mrview/displayable.o tmp/src/gui/mrview/tool/screen_capture.o tmp/src/gui/mrview/mode/slice.o tmp/src/dwi/tractography/file_base.o tmp/src/gui/mrview/tool/base.o tmp/src/gui/opengl/gl.o tmp/src/gui/mrview/tool/connectome/colourmap_observers.o tmp/src/gui/mrview/colourmap_button.o tmp/src/gui/mrview/tool/odf/odf.o tmp/src/gui/mrview/tool/connectome/connectome.o tmp/src/gui/mrview/tool/overlay_moc.o tmp/src/surface/freesurfer.o tmp/src/dwi/directions/predefined.o tmp/src/gui/mrview/adjust_button.o tmp/cmd/mrview.o tmp/src/gui/mrview/tool/roi_editor/item.o tmp/src/gui/mrview/mode/ortho.o tmp/src/gui/mrview/tool/roi_editor/roi.o tmp/src/gui/mrview/tool/odf/odf_moc.o tmp/src/gui/mrview/tool/fixel/base_fixel.o tmp/src/gui/mrview/spin_box_moc.o tmp/src/gui/shapes/cube.o tmp/src/surface/mesh.o tmp/src/gui/dialog/dicom.o tmp/src/gui/mrview/tool/fixel/fixel.o tmp/src/gui/mrview/tool/connectome/node.o tmp/src/exec_version.o tmp/src/gui/opengl/gl_core_3_3.o tmp/src/gui/color_button.o tmp/src/gui/color_button_moc.o tmp/src/gui/mrview/tool/overlay.o tmp/src/surface/scalar.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -m64 -Wl,-O1 -L/usr/lib/x86_64-linux-gnu -L/usr/X11R6/lib64 -lQtSvg -lQtOpenGL -lQtGui -lQtCore -lGL -lpthread -o bin/mrview g++ tmp/src/gui/opengl/shader.o tmp/src/gui/dialog/report_exception.o tmp/src/gui/dwi/renderer.o tmp/src/gui/dialog/list.o tmp/src/gui/lighting_dock_moc.o tmp/src/gui/shapes/halfsphere.o tmp/src/gui/shview/render_window.o tmp/src/gui/shview/icons.o tmp/src/dwi/directions/set.o tmp/src/gui/opengl/lighting.o tmp/src/gui/opengl/lighting_moc.o tmp/src/gui/dialog/dicom.o tmp/src/gui/color_button.o tmp/src/gui/dialog/dialog.o tmp/src/gui/dwi/render_frame_moc.o tmp/src/gui/opengl/gl.o tmp/src/gui/gui_moc.o tmp/src/dwi/directions/predefined.o tmp/src/gui/dialog/progress.o tmp/src/gui/projection.o tmp/cmd/shview.o tmp/src/gui/dwi/render_frame.o tmp/src/gui/opengl/font.o tmp/src/gui/gui.o tmp/src/gui/lighting_dock.o tmp/src/exec_version.o tmp/src/gui/opengl/gl_core_3_3.o tmp/src/gui/dialog/file.o tmp/src/gui/color_button_moc.o tmp/src/gui/shview/render_window_moc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -lz -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -m64 -Wl,-O1 -L/usr/lib/x86_64-linux-gnu -L/usr/X11R6/lib64 -lQtSvg -lQtOpenGL -lQtGui -lQtCore -lGL -lpthread -o bin/shview bin/tsfmult (469/505) [LB] bin/dwinormalise (470/505) [LB] bin/mrresize (471/505) [LB] bin/tckresample (472/505) [LB] bin/mrcrop (473/505) [LB] bin/mraverageheader (474/505) [LB] bin/mrinfo (475/505) [LB] bin/dwi2tensor (476/505) [LB] bin/dwidenoise (477/505) [LB] bin/tcksift2 (478/505) [LB] bin/dwi2fod (479/505) [LB] bin/tckmap (480/505) [LB] bin/amp2sh (481/505) [LB] bin/tsfinfo (482/505) [LB] bin/mrcheckerboardmask (483/505) [LB] bin/connectomestats (484/505) [LB] bin/tsfdivide (485/505) [LB] bin/tensor2metric (486/505) [LB] bin/connectome2tck (487/505) [LB] bin/mrregister (488/505) [LB] bin/tck2connectome (489/505) [LB] bin/5tt2gmwmi (490/505) [LB] bin/warpcorrect (491/505) [LB] bin/shconv (492/505) [LB] bin/sh2peaks (493/505) [LB] bin/sh2amp (494/505) [LB] bin/dwi2mask (495/505) [LB] bin/dcminfo (496/505) [LB] bin/tcktransform (497/505) [LB] bin/tcksample (498/505) [LB] bin/tckedit (499/505) [LB] bin/mrmetric (500/505) [LB] bin/tckgen (501/505) [LB] bin/mrclusterstats (502/505) [CC] tmp/src/gui/color_button_moc.o (503/505) [LB] bin/fixelreorient (504/505) [LB] bin/mrview (505/505) [LB] bin/shview make[1]: Leaving directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' debian/rules override_dh_auto_test make[1]: Entering directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' ./run_tests || { cat testing.log; exit 1; } logging to "testing.log" OK building testing commands... OK running "5tt2gmwmi"... 1 of 1 passed running "5tt2vis"... 1 of 1 passed running "5ttedit"... 1 of 1 passed running "amp2sh"... 1 of 1 passed running "dirgen"... 4 of 4 passed running "dwi2adc"... 1 of 1 passed running "dwi2fod"... 5 of 5 passed running "dwi2mask"... 1 of 1 passed running "dwi2tensor"... 8 of 8 passed running "dwidenoise"... 6 of 6 passed running "dwiextract"... 2 of 2 passed running "fixel2sh"... 2 of 2 passed running "fixel2tsf"... 1 of 1 passed running "fixel2voxel"... 13 of 13 passed running "fixelconvert"... 2 of 2 passed running "fixelcorrespondence"... 1 of 1 passed running "fixelcrop"... 1 of 1 passed running "fixelreorient"... 1 of 1 passed running "fod2dec"... 12 of 12 passed running "fod2fixel"... 3 of 3 passed running "label2colour"... 3 of 3 passed running "label2mesh"... 2 of 2 passed running "labelconvert"... 4 of 4 passed running "maskfilter"... 9 of 9 passed running "mesh2voxel"... 1 of 1 passed running "meshconvert"... 10 of 10 passed running "mrcalc"... 4 of 4 passed running "mrcat"... 5 of 5 passed running "mrconvert"... 11 of 11 passed running "mrcrop"... 2 of 2 passed running "mrdegibbs"... 1 of 1 passed running "mrfilter"... 15 of 15 passed running "mrhistmatch"... 2 of 2 passed running "mrhistogram"... 0 of 0 passed running "mrmath"... 4 of 4 passed running "mrpad"... 4 of 4 passed running "mrresize"... 8 of 8 passed running "mrstats"... 2 of 2 passed running "mrthreshold"... 9 of 9 passed running "mrtransform"... 10 of 10 passed running "peaks2amp"... 1 of 1 passed running "population_template"... 2 of 2 passed running "sh2amp"... 3 of 3 passed running "sh2peaks"... 2 of 2 passed running "sh2power"... 0 of 0 passed running "sh2response"... 1 of 1 passed running "shbasis"... 4 of 4 passed running "shconv"... 2 of 2 passed running "tck2connectome"... 3 of 3 passed running "tckconvert"... 8 of 8 passed running "tckgen"... 14 of 14 passed running "tckmap"... 4 of 4 passed running "tckresample"... 5 of 5 passed running "tcksample"... 8 of 8 passed running "tcksift"... 1 of 1 passed running "tcksift2"... 1 of 1 passed running "tcktransform"... 1 of 1 passed running "tensor2metric"... 8 of 8 passed running "transformcalc"... 5 of 5 passed running "transformcompose"... 4 of 4 passed running "transformconvert"... 4 of 4 passed running "tsfdivide"... 1 of 1 passed running "tsfmult"... 1 of 1 passed running "tsfsmooth"... 1 of 1 passed running "tsfthreshold"... 2 of 2 passed running "voxel2fixel"... 1 of 1 passed running "warp2metric"... 3 of 3 passed running "warpcorrect"... 1 of 1 passed running "warpinit"... 1 of 1 passed make[1]: Leaving directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_testroot dh_prep debian/rules override_dh_install make[1]: Entering directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_install # .pyc files get generated, so we remove all the .pyc/.pyo etc find debian -iname *.py? -delete make[1]: Leaving directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_installdocs dh_installchangelogs dh_installman dh_perl debian/rules override_dh_link make[1]: Entering directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' cp debian/mrtrix3.links.in debian/mrtrix3.links : # Generate symlinks for all the mr* commands for f in debian/mrtrix3/usr/lib/mrtrix3/bin/mrview; do \ bn=$(basename $f); \ echo "usr/lib/mrtrix3/bin/$bn usr/bin/$bn" >> debian/mrtrix3.links; \ echo "/usr/share/man/man1/mrtrix.1.gz /usr/share/man/man1/$bn.1.gz" >> debian/mrtrix3.links; \ done echo "/usr/share/mrtrix3/matlab /usr/share/matlab/site/m/mrtrix" >> debian/mrtrix3.links echo "/usr/share/mrtrix3/matlab /usr/share/octave/site/m/mrtrix" >> debian/mrtrix3.links dh_link make[1]: Leaving directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_strip_nondeterminism debian/rules override_dh_compress make[1]: Entering directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_compress -X.html make[1]: Leaving directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_fixperms dh_missing dh_strip dh_makeshlibs debian/rules override_dh_shlibdeps make[1]: Entering directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_shlibdeps -l /<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2/lib make[1]: Leaving directory '/<>/mrtrix3-3.0~rc3+git135-g2b8e7d0c2' dh_installdeb dh_gencontrol dh_md5sums dh_builddeb INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 pkgstriptranslations: processing mrtrix3 (in debian/mrtrix3); do_strip: , oemstrip: pkgstriptranslations: processing mrtrix3-doc (in debian/mrtrix3-doc); do_strip: , oemstrip: pkgstriptranslations: processing mrtrix3-dbgsym (in debian/.debhelper/mrtrix3/dbgsym-root); do_strip: , oemstrip: debian/mrtrix3/usr/share/applications/mrtrix3.desktop: does not have gettext domain, not stripping pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/mrtrix3/DEBIAN/control, package mrtrix3, directory debian/mrtrix3 pkgstripfiles: Running PNG optimization (using 4 cpus) for package mrtrix3 ... pkgstripfiles: processing control file: debian/.debhelper/mrtrix3/dbgsym-root/DEBIAN/control, package mrtrix3-dbgsym, directory debian/.debhelper/mrtrix3/dbgsym-root dpkg-deb: building package 'mrtrix3-dbgsym' in 'debian/.debhelper/scratch-space/build-mrtrix3/mrtrix3-dbgsym_3.0~rc3+git135-g2b8e7d0c2-3_amd64.deb'. o.o.o.o pkgstripfiles: PNG optimization (4/0) for package mrtrix3 took 0 s dpkg-deb: building package 'mrtrix3' in '../mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.deb'. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/mrtrix3-doc/DEBIAN/control, package mrtrix3-doc, directory debian/mrtrix3-doc pkgstripfiles: Disabled PNG optimization for -doc package mrtrix3-doc (to save build time) dpkg-deb: building package 'mrtrix3-doc' in '../mrtrix3-doc_3.0~rc3+git135-g2b8e7d0c2-3_all.deb'. Renaming mrtrix3-dbgsym_3.0~rc3+git135-g2b8e7d0c2-3_amd64.deb to mrtrix3-dbgsym_3.0~rc3+git135-g2b8e7d0c2-3_amd64.ddeb dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20190123-1143 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.changes: -------------------------------------------------- Format: 1.8 Date: Tue, 22 Jan 2019 14:49:00 -0500 Source: mrtrix3 Binary: mrtrix3 mrtrix3-doc Architecture: amd64 all Version: 3.0~rc3+git135-g2b8e7d0c2-3 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Yaroslav Halchenko Description: mrtrix3 - diffusion-weighted MRI white matter tractography mrtrix3-doc - documentation for mrtrix3 Changes: mrtrix3 (3.0~rc3+git135-g2b8e7d0c2-3) unstable; urgency=medium . * Clean up *.py? files upon install * debian/control, debian/patches/up_blend_python - just ask/use default Python (currently python2) Checksums-Sha1: 64fa43598a36c6dfbca1c5a51ffae4c83d70c2b4 661853268 mrtrix3-dbgsym_3.0~rc3+git135-g2b8e7d0c2-3_amd64.ddeb 7a9ac49e39f5fea7774940d4052e0729b782cbe0 47760 mrtrix3-doc_3.0~rc3+git135-g2b8e7d0c2-3_all.deb ba97cc5c3dcaba41bfd078b3f4fc900cc6ef6ad9 18526 mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.buildinfo 490171a812b2598ff3af6dd39180dc98a6a1f7cd 7896048 mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.deb Checksums-Sha256: e3b0fe5f4df1dfd8a1b1a283d70f7d8840226eb6d51cf162b2b85e2b60c37e2e 661853268 mrtrix3-dbgsym_3.0~rc3+git135-g2b8e7d0c2-3_amd64.ddeb 5b60cd8774d89ae3ea8700ebd96537863ddf4a9a4d30a2f6b0641eaa5991cbee 47760 mrtrix3-doc_3.0~rc3+git135-g2b8e7d0c2-3_all.deb 3e489c3d4dccad2193ad24f305bfeb6a3de3c2e55d65b489324620885e303cc7 18526 mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.buildinfo 6da637b99e5f3a46416a46ea7cb881df6914786990bd2cf0fedc73e471498ae1 7896048 mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.deb Files: cbd7c890c28ca61694035884c80e62c6 661853268 debug optional mrtrix3-dbgsym_3.0~rc3+git135-g2b8e7d0c2-3_amd64.ddeb fee614138bdc5b3074a0c7dbdecc3998 47760 doc optional mrtrix3-doc_3.0~rc3+git135-g2b8e7d0c2-3_all.deb 23da596c218983dd5812e3f148468a67 18526 science optional mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.buildinfo 7c23c8b03b97303587a5155011bea07c 7896048 science optional mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ mrtrix3-doc_3.0~rc3+git135-g2b8e7d0c2-3_all.deb ----------------------------------------------- new debian package, version 2.0. size 47760 bytes: control archive=1304 bytes. 762 bytes, 18 lines control 1443 bytes, 17 lines md5sums Package: mrtrix3-doc Source: mrtrix3 Version: 3.0~rc3+git135-g2b8e7d0c2-3 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 86 Conflicts: mrtrix-doc Section: doc Priority: optional Homepage: http://www.mrtrix.org Description: documentation for mrtrix3 Set of tools to perform diffusion-weighted MRI white matter tractography of the brain in the presence of crossing fibres, using Constrained Spherical Deconvolution, and a probabilisitic streamlines algorithm. Magnetic resonance images in DICOM, ANALYZE, or uncompressed NIfTI format are supported. . This package provides the documentation in HTML format. drwxr-xr-x root/root 0 2019-01-22 19:49 ./ drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/ drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/share/ drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/share/doc/mrtrix3-doc/ -rw-r--r-- root/root 832 2019-01-22 19:49 ./usr/share/doc/mrtrix3-doc/changelog.Debian.gz -rw-r--r-- root/root 1770 2019-01-22 19:49 ./usr/share/doc/mrtrix3-doc/copyright drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/share/doc/mrtrix3-doc/html/ -rw-r--r-- root/root 3382 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/build.md.gz -rw-r--r-- root/root 4852 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/cmdlineparsing.md.gz -rw-r--r-- root/root 1839 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/configure.md.gz drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/share/doc/mrtrix3-doc/html/examples/ -rw-r--r-- root/root 362 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/examples/examples.md -rw-r--r-- root/root 2001 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/examples/per_datum_multithreaded_processing.md.gz -rw-r--r-- root/root 2420 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/examples/per_datum_processing.md -rw-r--r-- root/root 2796 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/examples/per_voxel_multithreaded_processing.md.gz -rw-r--r-- root/root 1934 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/header.html -rw-r--r-- root/root 3720 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/image_access.md.gz -rw-r--r-- root/root 8829 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/logo.png -rw-r--r-- root/root 2085 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/module.md -rw-r--r-- root/root 4592 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/multithreading.md.gz -rw-r--r-- root/root 3476 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/newcommand.md.gz -rw-r--r-- root/root 1323 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/overview.md -rw-r--r-- root/root 25929 2018-12-13 21:39 ./usr/share/doc/mrtrix3-doc/html/stylesheet.css mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3_amd64.deb --------------------------------------------- new debian package, version 2.0. size 7896048 bytes: control archive=6084 bytes. 1019 bytes, 18 lines control 14254 bytes, 210 lines md5sums Package: mrtrix3 Version: 3.0~rc3+git135-g2b8e7d0c2-3 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 47852 Depends: libc6 (>= 2.27), libfftw3-double3 (>= 3.3.5), libgcc1 (>= 1:4.0), libgl1, libgomp1 (>= 4.9), libqt4-opengl (>= 4:4.7.0~beta1), libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.8.0), libstdc++6 (>= 7), zlib1g (>= 1:1.1.4), python Recommends: python-numpy Suggests: mrtrix3-doc, octave, matlab-support Conflicts: mrtrix Section: science Priority: optional Homepage: http://www.mrtrix.org Description: diffusion-weighted MRI white matter tractography Set of tools to perform diffusion-weighted MRI white matter tractography of the brain in the presence of crossing fibres, using Constrained Spherical Deconvolution, and a probabilisitic streamlines algorithm. Magnetic resonance images in DICOM, ANALYZE, or uncompressed NIfTI format are supported. drwxr-xr-x root/root 0 2019-01-22 19:49 ./ drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/ drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/bin/ lrwxrwxrwx root/root 0 2019-01-22 19:49 ./usr/bin/mrview -> ../lib/mrtrix3/bin/mrview drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/lib/mrtrix3/ drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/ -rwxr-xr-x root/root 227592 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/5tt2gmwmi -rwxr-xr-x root/root 211208 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/5tt2vis -rwxr-xr-x root/root 207112 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/5ttcheck -rwxr-xr-x root/root 227592 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/5ttedit -rwxr-xr-x root/root 3190 2018-12-13 21:39 ./usr/lib/mrtrix3/bin/5ttgen -rwxr-xr-x root/root 1038848 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/afdconnectivity -rwxr-xr-x root/root 411848 2019-01-22 19:49 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./usr/lib/mrtrix3/bin/dirsplit -rwxr-xr-x root/root 305336 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/dirstat -rwxr-xr-x root/root 305352 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/dwi2adc -rwxr-xr-x root/root 633032 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/dwi2fod -rwxr-xr-x root/root 551104 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/dwi2mask -rwxr-xr-x root/root 5693 2018-12-13 21:39 ./usr/lib/mrtrix3/bin/dwi2response -rwxr-xr-x root/root 354504 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/dwi2tensor -rwxr-xr-x root/root 8400 2018-12-13 21:39 ./usr/lib/mrtrix3/bin/dwibiascorrect -rwxr-xr-x root/root 248000 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/dwidenoise -rwxr-xr-x root/root 272576 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/dwiextract -rwxr-xr-x root/root 9112 2018-12-13 21:39 ./usr/lib/mrtrix3/bin/dwigradcheck -rwxr-xr-x root/root 5943 2018-12-13 21:39 ./usr/lib/mrtrix3/bin/dwiintensitynorm -rwxr-xr-x root/root 272576 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/dwinormalise -rwxr-xr-x root/root 67567 2018-12-13 21:39 ./usr/lib/mrtrix3/bin/dwipreproc -rwxr-xr-x root/root 775 2018-12-13 21:39 ./usr/lib/mrtrix3/bin/dwishellmath -rwxr-xr-x root/root 182480 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/fixel2sh -rwxr-xr-x root/root 723488 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/fixel2tsf -rwxr-xr-x root/root 559504 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/fixel2voxel -rwxr-xr-x root/root 1038944 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/fixelcfestats -rwxr-xr-x root/root 252112 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/fixelconvert -rwxr-xr-x root/root 235728 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/fixelcorrespondence -rwxr-xr-x root/root 211152 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/fixelcrop -rwxr-xr-x root/root 231632 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/fixelreorient -rwxr-xr-x root/root 391360 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/fod2dec -rwxr-xr-x root/root 522456 2019-01-22 19:49 ./usr/lib/mrtrix3/bin/fod2fixel -rwxr-xr-x root/root 4194 2018-12-13 21:39 ./usr/lib/mrtrix3/bin/foreach 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./usr/share/mrtrix3/matlab/write_mrtrix_tracks.m drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/share/octave/ drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/share/octave/site/ drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/share/octave/site/m/ lrwxrwxrwx root/root 0 2019-01-22 19:49 ./usr/share/octave/site/m/mrtrix -> ../../../mrtrix3/matlab drwxr-xr-x root/root 0 2019-01-22 19:49 ./usr/share/pixmaps/ -rw-r--r-- root/root 9770 2019-01-22 19:49 ./usr/share/pixmaps/mrtrix.png +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 8898008 Build-Time: 1746 Distribution: disco-proposed Host Architecture: amd64 Install-Time: 45 Job: mrtrix3_3.0~rc3+git135-g2b8e7d0c2-3.dsc Machine Architecture: amd64 Package: mrtrix3 Package-Time: 1793 Source-Version: 3.0~rc3+git135-g2b8e7d0c2-3 Space: 8898008 Status: successful Version: 3.0~rc3+git135-g2b8e7d0c2-3 -------------------------------------------------------------------------------- Finished at 20190123-1143 Build needed 00:29:53, 8898008k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-16312507 Scanning for processes to kill in build PACKAGEBUILD-16312507