https://launchpad.net/ubuntu/+source/mshr/2018.1.0+dfsg1-7build1/+build/15767726 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lcy01-amd64-027 4.4.0-140-generic #166-Ubuntu SMP Wed Nov 14 20:09:47 UTC 2018 x86_64 Buildd toolchain package versions: launchpad-buildd_165 python-lpbuildd_165 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 12 Dec 18:04:20 ntpdate[1830]: adjust time server 10.211.37.1 offset 0.007523 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15767726 /home/buildd/filecache-default/b71572c9405b6ce6ff1d1ad001cf764bb07f52ae Creating target for build PACKAGEBUILD-15767726 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15767726 Starting target for build PACKAGEBUILD-15767726 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15767726 'deb http://ftpmaster.internal/ubuntu disco main universe' 'deb http://ftpmaster.internal/ubuntu disco-security main universe' 'deb http://ftpmaster.internal/ubuntu disco-updates main universe' 'deb http://ftpmaster.internal/ubuntu disco-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-15767726 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15767726 Updating target for build PACKAGEBUILD-15767726 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 Packages [1005 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [509 kB] Get:7 http://ftpmaster.internal/ubuntu disco/universe amd64 Packages [8967 kB] Get:8 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5148 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 Packages [73.7 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [36.8 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 Packages [444 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [222 kB] Fetched 16.9 MB in 5s (3329 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libgdbm6 libperl5.28 perl-modules-5.28 The following packages will be upgraded: apt base-files binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-8 dash dmsetup dpkg dpkg-dev e2fslibs e2fsprogs fakeroot findutils g++ g++-8 gcc gcc-8 gcc-8-base grep hostname init init-system-helpers libapparmor1 libapt-pkg5.0 libasan5 libatomic1 libaudit-common libaudit1 libbinutils libcap-ng0 libcc1-0 libcom-err2 libcomerr2 libdb5.3 libdevmapper1.02.1 libdpkg-perl libext2fs2 libfakeroot libffi6 libgcc-8-dev libgcc1 libgcrypt20 libgdbm-compat4 libgmp10 libgnutls30 libgomp1 libgpg-error0 libhogweed4 libip4tc0 libitm1 libkmod2 liblsan0 libmpfr6 libmpx2 libnettle6 libquadmath0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsqlite3-0 libss2 libssl1.1 libstdc++-8-dev libstdc++6 libsystemd0 libtsan0 libubsan1 libudev1 linux-libc-dev lockfile-progs openssl perl perl-base sed systemd systemd-sysv tar tzdata 81 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 55.6 MB of archives. After this operation, 48.9 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main amd64 base-files amd64 10.1ubuntu8 [60.1 kB] Get:2 http://ftpmaster.internal/ubuntu disco/main amd64 tar amd64 1.30+dfsg-3 [242 kB] Get:3 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 dpkg amd64 1.19.2ubuntu2 [1101 kB] Get:4 http://ftpmaster.internal/ubuntu disco/main amd64 dash amd64 0.5.10.2-1 [89.3 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 findutils amd64 4.6.0+git+20181018-1 [295 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main amd64 grep amd64 3.1-3 [152 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main amd64 hostname amd64 3.21 [11.2 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main amd64 perl-modules-5.28 all 5.28.1-3 [2812 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main amd64 libgdbm6 amd64 1.18.1-2 [27.6 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main amd64 libgdbm-compat4 amd64 1.18.1-2 [6152 B] Get:11 http://ftpmaster.internal/ubuntu disco/main amd64 libperl5.28 amd64 5.28.1-3 [3820 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main amd64 perl amd64 5.28.1-3 [204 kB] Get:13 http://ftpmaster.internal/ubuntu disco/main amd64 perl-base amd64 5.28.1-3 [1513 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main amd64 libdb5.3 amd64 5.3.28+dfsg1-0.2 [672 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main amd64 sed amd64 4.5-2 [186 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main amd64 init-system-helpers all 1.56 [38.8 kB] Get:17 http://ftpmaster.internal/ubuntu disco/main amd64 libquadmath0 amd64 8.2.0-12ubuntu1 [134 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main amd64 libubsan1 amd64 8.2.0-12ubuntu1 [121 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main amd64 gcc-8-base amd64 8.2.0-12ubuntu1 [18.6 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main amd64 libgcc1 amd64 1:8.2.0-12ubuntu1 [40.7 kB] Get:21 http://ftpmaster.internal/ubuntu disco/main amd64 libitm1 amd64 8.2.0-12ubuntu1 [28.1 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main amd64 libasan5 amd64 8.2.0-12ubuntu1 [364 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main amd64 libgomp1 amd64 8.2.0-12ubuntu1 [76.4 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main amd64 libatomic1 amd64 8.2.0-12ubuntu1 [9088 B] Get:25 http://ftpmaster.internal/ubuntu disco/main amd64 liblsan0 amd64 8.2.0-12ubuntu1 [132 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main amd64 libtsan0 amd64 8.2.0-12ubuntu1 [287 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main amd64 libmpx2 amd64 8.2.0-12ubuntu1 [11.7 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main amd64 cpp-8 amd64 8.2.0-12ubuntu1 [7225 kB] Get:29 http://ftpmaster.internal/ubuntu disco/main amd64 libcc1-0 amd64 8.2.0-12ubuntu1 [39.6 kB] Get:30 http://ftpmaster.internal/ubuntu disco/main amd64 gcc-8 amd64 8.2.0-12ubuntu1 [8001 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main amd64 g++-8 amd64 8.2.0-12ubuntu1 [8112 kB] Get:32 http://ftpmaster.internal/ubuntu disco/main amd64 libstdc++-8-dev amd64 8.2.0-12ubuntu1 [1540 kB] Get:33 http://ftpmaster.internal/ubuntu disco/main amd64 libgcc-8-dev amd64 8.2.0-12ubuntu1 [2304 kB] Get:34 http://ftpmaster.internal/ubuntu disco/main amd64 libstdc++6 amd64 8.2.0-12ubuntu1 [398 kB] Get:35 http://ftpmaster.internal/ubuntu disco/main amd64 libgmp10 amd64 2:6.1.2+dfsg-4 [236 kB] Get:36 http://ftpmaster.internal/ubuntu disco/main amd64 libmpfr6 amd64 4.0.1-2 [241 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main amd64 libbinutils amd64 2.31.1-10ubuntu1 [482 kB] Get:38 http://ftpmaster.internal/ubuntu disco/main amd64 binutils-common amd64 2.31.1-10ubuntu1 [194 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main amd64 binutils amd64 2.31.1-10ubuntu1 [3396 B] Get:40 http://ftpmaster.internal/ubuntu disco/main amd64 binutils-x86-64-linux-gnu amd64 2.31.1-10ubuntu1 [1830 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main amd64 libudev1 amd64 239-7ubuntu15 [54.7 kB] Get:42 http://ftpmaster.internal/ubuntu disco/main amd64 libapt-pkg5.0 amd64 1.8.0~alpha2ubuntu1 [814 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main amd64 libnettle6 amd64 3.4.1~rc1-1 [111 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main amd64 libhogweed4 amd64 3.4.1~rc1-1 [140 kB] Get:45 http://ftpmaster.internal/ubuntu disco/main amd64 libgnutls30 amd64 3.6.4-2ubuntu2 [747 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main amd64 libseccomp2 amd64 2.3.3-3ubuntu2 [38.9 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main amd64 apt amd64 1.8.0~alpha2ubuntu1 [1182 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main amd64 systemd-sysv amd64 239-7ubuntu15 [9396 B] Get:49 http://ftpmaster.internal/ubuntu disco/main amd64 libapparmor1 amd64 2.12-4ubuntu10 [29.9 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main amd64 libaudit-common all 1:2.8.3-1ubuntu3 [4068 B] Get:51 http://ftpmaster.internal/ubuntu disco/main amd64 libcap-ng0 amd64 0.7.9-1build1 [10.9 kB] Get:52 http://ftpmaster.internal/ubuntu disco/main amd64 libaudit1 amd64 1:2.8.3-1ubuntu3 [38.8 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main amd64 libgpg-error0 amd64 1.32-3 [56.0 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main amd64 libkmod2 amd64 25-1ubuntu2 [41.7 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main amd64 systemd amd64 239-7ubuntu15 [2971 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main amd64 libsystemd0 amd64 239-7ubuntu15 [212 kB] Get:57 http://ftpmaster.internal/ubuntu disco/main amd64 libext2fs2 amd64 1.44.4-2ubuntu1 [159 kB] Get:58 http://ftpmaster.internal/ubuntu disco/main amd64 e2fsprogs amd64 1.44.4-2ubuntu1 [513 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main amd64 init amd64 1.56 [6652 B] Get:60 http://ftpmaster.internal/ubuntu disco/main amd64 libgcrypt20 amd64 1.8.4-3ubuntu1 [420 kB] Get:61 http://ftpmaster.internal/ubuntu disco/main amd64 libselinux1 amd64 2.8-1build2 [68.6 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage-common all 2.8-1build2 [6892 B] Get:63 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage1 amd64 2.8-1build2 [85.1 kB] Get:64 http://ftpmaster.internal/ubuntu disco/main amd64 libffi6 amd64 3.2.1-9 [18.1 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main amd64 libcom-err2 amd64 1.44.4-2ubuntu1 [8844 B] Get:66 http://ftpmaster.internal/ubuntu disco/main amd64 libss2 amd64 1.44.4-2ubuntu1 [11.1 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main amd64 libdevmapper1.02.1 amd64 2:1.02.145-4.1ubuntu4 [127 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main amd64 dmsetup amd64 2:1.02.145-4.1ubuntu4 [74.6 kB] Get:69 http://ftpmaster.internal/ubuntu disco/main amd64 libip4tc0 amd64 1.6.1-2ubuntu3 [19.7 kB] Get:70 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsqlite3-0 amd64 3.26.0-3 [530 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main amd64 libssl1.1 amd64 1.1.1a-1ubuntu2 [1297 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main amd64 openssl amd64 1.1.1a-1ubuntu2 [618 kB] Get:73 http://ftpmaster.internal/ubuntu disco/main amd64 tzdata all 2018g-1 [188 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main amd64 g++ amd64 4:8.2.0-2ubuntu2 [1608 B] Get:75 http://ftpmaster.internal/ubuntu disco/main amd64 gcc amd64 4:8.2.0-2ubuntu2 [5224 B] Get:76 http://ftpmaster.internal/ubuntu disco/main amd64 cpp amd64 4:8.2.0-2ubuntu2 [27.6 kB] Get:77 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 dpkg-dev all 1.19.2ubuntu2 [549 kB] Get:78 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libdpkg-perl all 1.19.2ubuntu2 [227 kB] Get:79 http://ftpmaster.internal/ubuntu disco/main amd64 e2fslibs amd64 1.44.4-2ubuntu1 [2712 B] Get:80 http://ftpmaster.internal/ubuntu disco/main amd64 libfakeroot amd64 1.23-1 [25.3 kB] Get:81 http://ftpmaster.internal/ubuntu disco/main amd64 fakeroot amd64 1.23-1 [62.4 kB] Get:82 http://ftpmaster.internal/ubuntu disco/main amd64 libcomerr2 amd64 1.44.4-2ubuntu1 [2712 B] Get:83 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 linux-libc-dev amd64 4.19.0-9.10 [1041 kB] Get:84 http://ftpmaster.internal/ubuntu disco/main amd64 lockfile-progs amd64 0.1.18 [9872 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 55.6 MB in 3s (17.8 MB/s) (Reading database ... 12650 files and directories currently installed.) 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Processing triggers for libc-bin (2.28-0ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-15767726 amd64 disco-proposed -c chroot:build-PACKAGEBUILD-15767726 --arch=amd64 --dist=disco-proposed --nolog -A mshr_2018.1.0+dfsg1-7build1.dsc Initiating build PACKAGEBUILD-15767726 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-140-generic #166-Ubuntu SMP Wed Nov 14 20:09:47 UTC 2018 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lcy01-amd64-027.buildd +==============================================================================+ | mshr 2018.1.0+dfsg1-7build1 (amd64) 12 Dec 2018 18:05 | +==============================================================================+ Package: mshr Version: 2018.1.0+dfsg1-7build1 Source Version: 2018.1.0+dfsg1-7build1 Distribution: disco-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/mshr-TeFvNd/mshr-2018.1.0+dfsg1' with '<>' I: NOTICE: Log filtering will replace 'build/mshr-TeFvNd' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-15767726/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- mshr_2018.1.0+dfsg1-7build1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-Js5ZD8/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-Js5ZD8/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Js5ZD8/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-Js5ZD8/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Js5ZD8/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-Js5ZD8/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (160 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-Js5ZD8/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14507 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 11), python3-all-dev, dh-python, python3-setuptools, cmake (>= 3.5), python3-pybind11 (>= 2.2.2), libmpfr-dev, libgmp-dev, libcgal-dev (>= 4.13), libtet1.5-dev, libdolfin-dev (>= 2018.1), python3-ffc (>= 2018.1), python3-numpy, python3-petsc4py, python3-slepc4py, libproj-dev Filtered Build-Depends: debhelper (>= 11), python3-all-dev, dh-python, python3-setuptools, cmake (>= 3.5), python3-pybind11 (>= 2.2.2), libmpfr-dev, libgmp-dev, libcgal-dev (>= 4.13), libtet1.5-dev, libdolfin-dev (>= 2018.1), python3-ffc (>= 2018.1), python3-numpy, python3-petsc4py, python3-slepc4py, libproj-dev dpkg-deb: building package 'sbuild-build-depends-mshr-dummy' in '/<>/resolver-soz1NI/apt_archive/sbuild-build-depends-mshr-dummy.deb'. Ign:1 copy:/<>/resolver-soz1NI/apt_archive ./ InRelease Get:2 copy:/<>/resolver-soz1NI/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-soz1NI/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-soz1NI/apt_archive ./ Sources [321 B] Get:5 copy:/<>/resolver-soz1NI/apt_archive ./ Packages [641 B] Fetched 3081 B in 0s (215 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install mshr build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base gfortran gfortran-8 groff-base ibverbs-providers icu-devtools intltool-debian libaec-dev libaec0 libamd2 libarchive-zip-perl libarchive13 libarpack2 libarpack2-dev libasn1-8-heimdal libblas-dev libblas3 libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono-dev libboost-chrono1.67-dev libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-math-dev libboost-math1.67-dev libboost-math1.67.0 libboost-mpi-dev libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-program-options-dev libboost-program-options1.67-dev libboost-program-options1.67.0 libboost-regex1.67-dev libboost-regex1.67.0 libboost-serialization-dev libboost-serialization1.67-dev libboost-serialization1.67.0 libboost-system-dev libboost-system1.67-dev libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0 libboost-timer-dev libboost-timer1.67-dev libboost-timer1.67.0 libboost1.67-dev libbsd0 libbtf1 libcamd2 libccolamd2 libcgal-dev libcgal13 libcholmod3 libcolamd2 libcombblas1.16.0 libcroco3 libcurl4 libcxsparse3 libdolfin-dev libdolfin2018.1 libedit2 libeigen3-dev libelf1 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libgfortran-8-dev libgfortran5 libglib2.0-0 libgmp-dev libgmpxx4ldbl libgraphblas2 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libheimbase1-heimdal libheimntlm0-heimdal libhwloc-dev libhwloc-plugins libhwloc5 libhx509-5-heimdal libhypre-2.15.1 libhypre-dev libibverbs-dev libibverbs1 libicu-dev libicu63 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjsoncpp1 libk5crypto3 libkeyutils1 libklu1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common libldl2 libltdl-dev libltdl7 liblzo2-2 libmagic-mgc libmagic1 libmetis5 libmongoose2 libmpdec2 libmpfr-dev libmumps-5.1.2 libmumps-dev libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libparpack2 libparpack2-dev libpciaccess0 libpetsc-real3.9 libpetsc-real3.9-dev libpipeline1 libpmix2 libproj-dev libproj13 libpsl5 libpsm-infinipath1 libpsm2-2 libptscotch-6.0 libptscotch-dev libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librbio2 librdmacm1 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libscalapack-mpi-dev libscalapack-openmpi-dev libscalapack-openmpi2.0 libscotch-6.0 libscotch-dev libsigsegv2 libslepc-real3.9 libslepc-real3.9-dev libspooles-dev libspooles2.2 libspqr2 libssl-dev libsuitesparse-dev libsuitesparseconfig5 libsuperlu-dev libsuperlu-dist-dev libsuperlu-dist6 libsuperlu5 libsz2 libtet1.5 libtet1.5-dev libtool libumfpack5 libuv1 libwind0-heimdal libxml2 libxml2-dev m4 man-db mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client pkg-config po-debconf proj-data pybind11-dev python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-all python3-all-dev python3-dev python3-dijitso python3-distutils python3-ffc python3-fiat python3-lib2to3 python3-minimal python3-mpi4py python3-mpmath python3-numpy python3-petsc4py python3-pkg-resources python3-pybind11 python3-setuptools python3-slepc4py python3-sympy python3-ufl python3.7 python3.7-dev python3.7-minimal swig swig3.0 zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-8-multilib gfortran-8-doc libgfortran5-dbg libcoarrays-dev groff lrzip liblapack-doc libboost-doc libboost-graph1.67-dev libboost1.67-doc libboost-container1.67-dev libboost-context1.67-dev libboost-coroutine1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev libboost-graph-parallel1.67-dev libboost-locale1.67-dev libboost-log1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev libboost-python1.67-dev libboost-random1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-test1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev libmpfi-dev libtbb-dev dolfin-doc python3-dolfin libeigen3-doc libfftw3-doc gmp-doc libgmp10-doc krb5-doc krb5-user libhdf5-doc libhwloc-contrib-plugins icu-doc libtool-doc libmpfr-doc openmpi-doc pciutils petsc-dev libpetsc-real3.9-dbg petsc3.9-doc libluminate-dev proj-bin scalapack-doc libslepc3.9-dev-examples slepc3.9-doc spooles-doc libssl-doc libsuperlu-doc gcj-jdk m4-doc apparmor less www-browser opencl-icd keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl pybind11-doc python-doc python-tk python2-doc python2.7-doc binfmt-support python3-doc python3-tk python3-venv python-dijitso-doc python3-gmpy2 python3-matplotlib python-mpmath-doc python-numpy-doc python3-nose python3-numpy-dbg python-setuptools-doc texlive-fonts-extra dvipng python-sympy-doc python-ufl-doc python3.7-venv python3.7-doc swig-doc swig-examples swig3.0-examples swig3.0-doc Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libcoarrays-openmpi-dev libpetsc3.9-dev-examples ksh | mksh | pdksh | zsh publicsuffix libsasl2-modules xauth libmail-sendmail-perl python-petsc4py-docs python-slepc4py-docs python3-pil ipython3 The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base gfortran gfortran-8 groff-base ibverbs-providers icu-devtools intltool-debian libaec-dev libaec0 libamd2 libarchive-zip-perl libarchive13 libarpack2 libarpack2-dev libasn1-8-heimdal libblas-dev libblas3 libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono-dev libboost-chrono1.67-dev libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev libboost-filesystem-dev libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-math-dev libboost-math1.67-dev libboost-math1.67.0 libboost-mpi-dev libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-program-options-dev libboost-program-options1.67-dev libboost-program-options1.67.0 libboost-regex1.67-dev libboost-regex1.67.0 libboost-serialization-dev libboost-serialization1.67-dev libboost-serialization1.67.0 libboost-system-dev libboost-system1.67-dev libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0 libboost-timer-dev libboost-timer1.67-dev libboost-timer1.67.0 libboost1.67-dev libbsd0 libbtf1 libcamd2 libccolamd2 libcgal-dev libcgal13 libcholmod3 libcolamd2 libcombblas1.16.0 libcroco3 libcurl4 libcxsparse3 libdolfin-dev libdolfin2018.1 libedit2 libeigen3-dev libelf1 libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1 libexpat1-dev libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libgfortran-8-dev libgfortran5 libglib2.0-0 libgmp-dev libgmpxx4ldbl libgraphblas2 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev libheimbase1-heimdal libheimntlm0-heimdal libhwloc-dev libhwloc-plugins libhwloc5 libhx509-5-heimdal libhypre-2.15.1 libhypre-dev libibverbs-dev libibverbs1 libicu-dev libicu63 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjsoncpp1 libk5crypto3 libkeyutils1 libklu1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 libldap-2.4-2 libldap-common libldl2 libltdl-dev libltdl7 liblzo2-2 libmagic-mgc libmagic1 libmetis5 libmongoose2 libmpdec2 libmpfr-dev libmumps-5.1.2 libmumps-dev libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libparpack2 libparpack2-dev libpciaccess0 libpetsc-real3.9 libpetsc-real3.9-dev libpipeline1 libpmix2 libproj-dev libproj13 libpsl5 libpsm-infinipath1 libpsm2-2 libptscotch-6.0 libptscotch-dev libpython-stdlib libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librbio2 librdmacm1 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libscalapack-mpi-dev libscalapack-openmpi-dev libscalapack-openmpi2.0 libscotch-6.0 libscotch-dev libsigsegv2 libslepc-real3.9 libslepc-real3.9-dev libspooles-dev libspooles2.2 libspqr2 libssl-dev libsuitesparse-dev libsuitesparseconfig5 libsuperlu-dev libsuperlu-dist-dev libsuperlu-dist6 libsuperlu5 libsz2 libtet1.5 libtet1.5-dev libtool libumfpack5 libuv1 libwind0-heimdal libxml2 libxml2-dev m4 man-db mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client pkg-config po-debconf proj-data pybind11-dev python python-minimal python2 python2-minimal python2.7 python2.7-minimal python3 python3-all python3-all-dev python3-dev python3-dijitso python3-distutils python3-ffc python3-fiat python3-lib2to3 python3-minimal python3-mpi4py python3-mpmath python3-numpy python3-petsc4py python3-pkg-resources python3-pybind11 python3-setuptools python3-slepc4py python3-sympy python3-ufl python3.7 python3.7-dev python3.7-minimal sbuild-build-depends-mshr-dummy swig swig3.0 zlib1g-dev 0 upgraded, 267 newly installed, 0 to remove and 0 not upgraded. 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http://ftpmaster.internal/ubuntu disco/main amd64 po-debconf all 1.0.21 [233 kB] Get:83 http://ftpmaster.internal/ubuntu disco/main amd64 debhelper all 11.5.3ubuntu1 [888 kB] Get:84 http://ftpmaster.internal/ubuntu disco/main amd64 python3-lib2to3 all 3.7.1-1ubuntu4 [74.2 kB] Get:85 http://ftpmaster.internal/ubuntu disco/main amd64 python3-distutils all 3.7.1-1ubuntu4 [139 kB] Get:86 http://ftpmaster.internal/ubuntu disco/main amd64 dh-python all 3.20180927ubuntu2 [90.9 kB] Get:87 http://ftpmaster.internal/ubuntu disco/main amd64 libgfortran5 amd64 8.2.0-12ubuntu1 [587 kB] Get:88 http://ftpmaster.internal/ubuntu disco/main amd64 libgfortran-8-dev amd64 8.2.0-12ubuntu1 [621 kB] Get:89 http://ftpmaster.internal/ubuntu disco/main amd64 gfortran-8 amd64 8.2.0-12ubuntu1 [7645 kB] Get:90 http://ftpmaster.internal/ubuntu disco/main amd64 gfortran amd64 4:8.2.0-2ubuntu2 [1368 B] Get:91 http://ftpmaster.internal/ubuntu disco/main amd64 libnl-3-200 amd64 3.4.0-1 [53.9 kB] Get:92 http://ftpmaster.internal/ubuntu disco/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] Get:93 http://ftpmaster.internal/ubuntu disco/main amd64 libibverbs1 amd64 21.0-1 [49.7 kB] Get:94 http://ftpmaster.internal/ubuntu disco/main amd64 ibverbs-providers amd64 21.0-1 [183 kB] Get:95 http://ftpmaster.internal/ubuntu disco/main amd64 icu-devtools amd64 63.1-5 [183 kB] Get:96 http://ftpmaster.internal/ubuntu disco/universe amd64 libaec0 amd64 1.0.2-1 [19.1 kB] Get:97 http://ftpmaster.internal/ubuntu disco/main amd64 libsuitesparseconfig5 amd64 1:5.3.0+dfsg-1 [9288 B] Get:98 http://ftpmaster.internal/ubuntu disco/main amd64 libamd2 amd64 1:5.3.0+dfsg-1 [19.4 kB] Get:99 http://ftpmaster.internal/ubuntu disco/main amd64 libblas3 amd64 3.8.0-2 [138 kB] Get:100 http://ftpmaster.internal/ubuntu disco/main amd64 liblapack3 amd64 3.8.0-2 [2099 kB] Get:101 http://ftpmaster.internal/ubuntu disco/universe amd64 libarpack2 amd64 3.6.3-1 [90.1 kB] Get:102 http://ftpmaster.internal/ubuntu disco/main amd64 libblas-dev amd64 3.8.0-2 [141 kB] Get:103 http://ftpmaster.internal/ubuntu disco/main amd64 liblapack-dev amd64 3.8.0-2 [2127 kB] Get:104 http://ftpmaster.internal/ubuntu disco/universe amd64 libarpack2-dev amd64 3.6.3-1 [97.2 kB] Get:105 http://ftpmaster.internal/ubuntu disco/main amd64 libboost1.67-dev amd64 1.67.0-11 [8362 kB] Get:106 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-atomic1.67.0 amd64 1.67.0-11 [201 kB] Get:107 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-atomic1.67-dev amd64 1.67.0-11 [199 kB] Get:108 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-system1.67.0 amd64 1.67.0-11 [204 kB] Get:109 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-chrono1.67.0 amd64 1.67.0-11 [208 kB] Get:110 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-chrono1.67-dev amd64 1.67.0-11 [210 kB] Get:111 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-chrono-dev amd64 1.67.0.1 [3652 B] Get:112 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-date-time1.67.0 amd64 1.67.0-11 [214 kB] Get:113 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-serialization1.67.0 amd64 1.67.0-11 [294 kB] Get:114 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-serialization1.67-dev amd64 1.67.0-11 [333 kB] Get:115 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-date-time1.67-dev amd64 1.67.0-11 [221 kB] Get:116 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-dev amd64 1.67.0.1 [3228 B] Get:117 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-filesystem1.67.0 amd64 1.67.0-11 [235 kB] Get:118 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-system1.67-dev amd64 1.67.0-11 [205 kB] Get:119 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-filesystem1.67-dev amd64 1.67.0-11 [242 kB] Get:120 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-filesystem-dev amd64 1.67.0.1 [3064 B] Get:121 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-regex1.67.0 amd64 1.67.0-11 [457 kB] Get:122 http://ftpmaster.internal/ubuntu disco/main amd64 libicu-dev amd64 63.1-5 [9178 kB] Get:123 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-regex1.67-dev amd64 1.67.0-11 [511 kB] Get:124 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-iostreams1.67.0 amd64 1.67.0-11 [224 kB] Get:125 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-iostreams1.67-dev amd64 1.67.0-11 [229 kB] Get:126 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-iostreams-dev amd64 1.67.0.1 [3012 B] Get:127 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-math1.67.0 amd64 1.67.0-11 [437 kB] Get:128 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-math1.67-dev amd64 1.67.0-11 [715 kB] Get:129 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-math-dev amd64 1.67.0.1 [3224 B] Get:130 http://ftpmaster.internal/ubuntu disco/main amd64 libevent-2.1-6 amd64 2.1.8-stable-4build1 [133 kB] Get:131 http://ftpmaster.internal/ubuntu disco/main amd64 libevent-core-2.1-6 amd64 2.1.8-stable-4build1 [85.9 kB] Get:132 http://ftpmaster.internal/ubuntu disco/main amd64 libevent-pthreads-2.1-6 amd64 2.1.8-stable-4build1 [5228 B] Get:133 http://ftpmaster.internal/ubuntu disco/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6 [168 kB] Get:134 http://ftpmaster.internal/ubuntu disco/universe amd64 libpsm2-2 amd64 11.2.68-4 [177 kB] Get:135 http://ftpmaster.internal/ubuntu disco/main amd64 librdmacm1 amd64 21.0-1 [63.2 kB] Get:136 http://ftpmaster.internal/ubuntu disco/universe amd64 libfabric1 amd64 1.6.1-5 [392 kB] Get:137 http://ftpmaster.internal/ubuntu disco/main amd64 libltdl7 amd64 2.4.6-6 [38.8 kB] Get:138 http://ftpmaster.internal/ubuntu disco/universe amd64 libhwloc5 amd64 1.11.11-2 [107 kB] Get:139 http://ftpmaster.internal/ubuntu disco/main amd64 libpciaccess0 amd64 0.14-1 [17.9 kB] Get:140 http://ftpmaster.internal/ubuntu disco/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] Get:141 http://ftpmaster.internal/ubuntu disco/universe amd64 libhwloc-plugins amd64 1.11.11-2 [12.9 kB] Get:142 http://ftpmaster.internal/ubuntu disco/universe amd64 libpmix2 amd64 3.0.2-2 [406 kB] Get:143 http://ftpmaster.internal/ubuntu disco/universe amd64 libopenmpi3 amd64 3.1.3-4 [2150 kB] Get:144 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-mpi1.67.0 amd64 1.67.0-11 [246 kB] Get:145 http://ftpmaster.internal/ubuntu disco/universe amd64 openmpi-common all 3.1.3-4 [147 kB] Get:146 http://ftpmaster.internal/ubuntu disco/main amd64 libnl-3-dev amd64 3.4.0-1 [92.2 kB] Get:147 http://ftpmaster.internal/ubuntu disco/main amd64 libnl-route-3-dev amd64 3.4.0-1 [166 kB] Get:148 http://ftpmaster.internal/ubuntu disco/main amd64 libibverbs-dev amd64 21.0-1 [353 kB] Get:149 http://ftpmaster.internal/ubuntu disco/main amd64 libnuma-dev amd64 2.0.12-1 [32.4 kB] Get:150 http://ftpmaster.internal/ubuntu disco/main amd64 libltdl-dev amd64 2.4.6-6 [162 kB] Get:151 http://ftpmaster.internal/ubuntu disco/universe amd64 libhwloc-dev amd64 1.11.11-2 [170 kB] Get:152 http://ftpmaster.internal/ubuntu disco/universe amd64 openmpi-bin amd64 3.1.3-4 [87.9 kB] Get:153 http://ftpmaster.internal/ubuntu disco/universe amd64 libopenmpi-dev amd64 3.1.3-4 [861 kB] Get:154 http://ftpmaster.internal/ubuntu disco/universe amd64 mpi-default-dev amd64 1.13 [3748 B] Get:155 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-mpi1.67-dev amd64 1.67.0-11 [355 kB] Get:156 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-mpi-dev amd64 1.67.0.1 [3108 B] Get:157 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-program-options1.67.0 amd64 1.67.0-11 [330 kB] Get:158 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-program-options1.67-dev amd64 1.67.0-11 [357 kB] Get:159 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-program-options-dev amd64 1.67.0.1 [3040 B] Get:160 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-serialization-dev amd64 1.67.0.1 [3248 B] Get:161 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-system-dev amd64 1.67.0.1 [3172 B] Get:162 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-thread1.67.0 amd64 1.67.0-11 [241 kB] Get:163 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-thread1.67-dev amd64 1.67.0-11 [243 kB] Get:164 http://ftpmaster.internal/ubuntu disco/main amd64 libboost-thread-dev amd64 1.67.0.1 [3056 B] Get:165 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-timer1.67.0 amd64 1.67.0-11 [205 kB] Get:166 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-timer1.67-dev amd64 1.67.0-11 [205 kB] Get:167 http://ftpmaster.internal/ubuntu disco/universe amd64 libboost-timer-dev amd64 1.67.0.1 [3144 B] Get:168 http://ftpmaster.internal/ubuntu disco/main amd64 libbtf1 amd64 1:5.3.0+dfsg-1 [10.8 kB] Get:169 http://ftpmaster.internal/ubuntu disco/main amd64 libcamd2 amd64 1:5.3.0+dfsg-1 [20.9 kB] Get:170 http://ftpmaster.internal/ubuntu disco/main amd64 libccolamd2 amd64 1:5.3.0+dfsg-1 [22.4 kB] Get:171 http://ftpmaster.internal/ubuntu disco/universe amd64 libcgal13 amd64 4.13-1ubuntu1 [268 kB] Get:172 http://ftpmaster.internal/ubuntu disco/main amd64 libgmpxx4ldbl amd64 2:6.1.2+dfsg-4 [9096 B] Get:173 http://ftpmaster.internal/ubuntu disco/main amd64 libgmp-dev amd64 2:6.1.2+dfsg-4 [312 kB] Get:174 http://ftpmaster.internal/ubuntu disco/main amd64 libmpfr-dev amd64 4.0.1-2 [241 kB] Get:175 http://ftpmaster.internal/ubuntu disco/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-0ubuntu2 [176 kB] Get:176 http://ftpmaster.internal/ubuntu disco/universe amd64 libcgal-dev amd64 4.13-1ubuntu1 [4460 kB] Get:177 http://ftpmaster.internal/ubuntu disco/main amd64 libcolamd2 amd64 1:5.3.0+dfsg-1 [16.4 kB] Get:178 http://ftpmaster.internal/ubuntu disco/main amd64 libmetis5 amd64 5.1.0.dfsg-5 [169 kB] Get:179 http://ftpmaster.internal/ubuntu disco/main amd64 libcholmod3 amd64 1:5.3.0+dfsg-1 [308 kB] Get:180 http://ftpmaster.internal/ubuntu disco/universe amd64 libcombblas1.16.0 amd64 1.6.2-3 [272 kB] Get:181 http://ftpmaster.internal/ubuntu disco/main amd64 libcxsparse3 amd64 1:5.3.0+dfsg-1 [62.0 kB] Get:182 http://ftpmaster.internal/ubuntu disco/universe amd64 libsz2 amd64 1.0.2-1 [5152 B] Get:183 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libhdf5-openmpi-103 amd64 1.10.4+repack-1 [1338 kB] Get:184 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-double3 amd64 3.3.8-2 [727 kB] Get:185 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-long3 amd64 3.3.8-2 [312 kB] Get:186 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-single3 amd64 3.3.8-2 [757 kB] Get:187 http://ftpmaster.internal/ubuntu disco/universe amd64 libfftw3-mpi3 amd64 3.3.8-2 [45.7 kB] Get:188 http://ftpmaster.internal/ubuntu disco/universe amd64 libsuperlu-dist6 amd64 6.1.0+dfsg1-1 [401 kB] Get:189 http://ftpmaster.internal/ubuntu disco/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-3build1 [159 kB] Get:190 http://ftpmaster.internal/ubuntu disco/universe amd64 libhypre-2.15.1 amd64 2.15.1-2 [1786 kB] Get:191 http://ftpmaster.internal/ubuntu disco/main amd64 libklu1 amd64 1:5.3.0+dfsg-1 [70.9 kB] Get:192 http://ftpmaster.internal/ubuntu disco/universe amd64 mpi-default-bin amd64 1.13 [2968 B] Get:193 http://ftpmaster.internal/ubuntu disco/universe amd64 libscalapack-openmpi2.0 amd64 2.0.2-7build2 [1462 kB] Get:194 http://ftpmaster.internal/ubuntu disco/universe amd64 libmumps-5.1.2 amd64 5.1.2-4build2 [1114 kB] Get:195 http://ftpmaster.internal/ubuntu disco/universe amd64 libptscotch-6.0 amd64 6.0.6-2 [653 kB] Get:196 http://ftpmaster.internal/ubuntu disco/main amd64 libumfpack5 amd64 1:5.3.0+dfsg-1 [228 kB] Get:197 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libpetsc-real3.9 amd64 3.9.4+dfsg1-3build1 [4771 kB] Get:198 http://ftpmaster.internal/ubuntu disco/universe amd64 libparpack2 amd64 3.6.3-1 [84.6 kB] Get:199 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libslepc-real3.9 amd64 3.9.2+dfsg1-2build3 [859 kB] Get:200 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libdolfin2018.1 amd64 2018.1.0.post1-12build2 [1687 kB] Get:201 http://ftpmaster.internal/ubuntu disco/main amd64 libexpat1-dev amd64 2.2.6-1 [134 kB] Get:202 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-quad3 amd64 3.3.8-2 [552 kB] Get:203 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-bin amd64 3.3.8-2 [32.2 kB] Get:204 http://ftpmaster.internal/ubuntu disco/main amd64 libfftw3-dev amd64 3.3.8-2 [2087 kB] Get:205 http://ftpmaster.internal/ubuntu disco/universe amd64 libfftw3-mpi-dev amd64 3.3.8-2 [47.4 kB] Get:206 http://ftpmaster.internal/ubuntu disco/main amd64 libgraphblas2 amd64 1:5.3.0+dfsg-1 [387 kB] Get:207 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg-turbo8 amd64 2.0.0-0ubuntu2 [117 kB] Get:208 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg-turbo8-dev amd64 2.0.0-0ubuntu2 [238 kB] Get:209 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] Get:210 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg8-dev amd64 8c-2ubuntu8 [1552 B] Get:211 http://ftpmaster.internal/ubuntu disco/main amd64 libjpeg-dev amd64 8c-2ubuntu8 [1546 B] Get:212 http://ftpmaster.internal/ubuntu disco/main amd64 libldl2 amd64 1:5.3.0+dfsg-1 [10.4 kB] Get:213 http://ftpmaster.internal/ubuntu disco/main amd64 libmongoose2 amd64 1:5.3.0+dfsg-1 [30.2 kB] Get:214 http://ftpmaster.internal/ubuntu disco/main amd64 librbio2 amd64 1:5.3.0+dfsg-1 [23.9 kB] Get:215 http://ftpmaster.internal/ubuntu disco/main amd64 libspqr2 amd64 1:5.3.0+dfsg-1 [64.0 kB] Get:216 http://ftpmaster.internal/ubuntu disco/main amd64 libsuitesparse-dev amd64 1:5.3.0+dfsg-1 [1272 kB] Get:217 http://ftpmaster.internal/ubuntu disco/universe amd64 libspooles2.2 amd64 2.2-13 [463 kB] Get:218 http://ftpmaster.internal/ubuntu disco/universe amd64 libspooles-dev amd64 2.2-13 [592 kB] Get:219 http://ftpmaster.internal/ubuntu disco/universe amd64 libsuperlu-dev amd64 5.2.1+dfsg1-3build1 [16.3 kB] Get:220 http://ftpmaster.internal/ubuntu disco/universe amd64 libhypre-dev amd64 2.15.1-2 [153 kB] Get:221 http://ftpmaster.internal/ubuntu disco/universe amd64 libscotch-6.0 amd64 6.0.6-2 [420 kB] Get:222 http://ftpmaster.internal/ubuntu disco/universe amd64 libscotch-dev amd64 6.0.6-2 [3022 kB] Get:223 http://ftpmaster.internal/ubuntu disco/universe amd64 libptscotch-dev amd64 6.0.6-2 [6770 kB] Get:224 http://ftpmaster.internal/ubuntu disco/universe amd64 libscalapack-openmpi-dev amd64 2.0.2-7build2 [6080 B] Get:225 http://ftpmaster.internal/ubuntu disco/universe amd64 libscalapack-mpi-dev amd64 2.0.2-7build2 [2116 B] Get:226 http://ftpmaster.internal/ubuntu disco/universe amd64 libmumps-dev amd64 5.1.2-4build2 [992 kB] Get:227 http://ftpmaster.internal/ubuntu disco/main amd64 libssl-dev amd64 1.1.1a-1ubuntu2 [1569 kB] Get:228 http://ftpmaster.internal/ubuntu disco/universe amd64 libaec-dev amd64 1.0.2-1 [16.9 kB] Get:229 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libhdf5-openmpi-dev amd64 1.10.4+repack-1 [2486 kB] Get:230 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libhdf5-mpi-dev amd64 1.10.4+repack-1 [3164 B] Get:231 http://ftpmaster.internal/ubuntu disco/universe amd64 libsuperlu-dist-dev amd64 6.1.0+dfsg1-1 [250 kB] Get:232 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libpetsc-real3.9-dev amd64 3.9.4+dfsg1-3build1 [5901 kB] Get:233 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 proj-data all 5.2.0-1 [6952 kB] Get:234 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libproj13 amd64 5.2.0-1 [195 kB] Get:235 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpython3.7 amd64 3.7.2~rc1-1 [1493 kB] Get:236 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libpython3.7-dev amd64 3.7.2~rc1-1 [48.4 MB] Get:237 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3-dev amd64 3.7.1-1ubuntu1 [7228 B] Get:238 http://ftpmaster.internal/ubuntu disco/main amd64 libpython3-all-dev amd64 3.7.1-1ubuntu1 [1112 B] Get:239 http://ftpmaster.internal/ubuntu disco/universe amd64 libparpack2-dev amd64 3.6.3-1 [92.7 kB] Get:240 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libslepc-real3.9-dev amd64 3.9.2+dfsg1-2build3 [4048 kB] Get:241 http://ftpmaster.internal/ubuntu disco/main amd64 libxml2-dev amd64 2.9.4+dfsg1-7ubuntu3 [719 kB] Get:242 http://ftpmaster.internal/ubuntu disco/main amd64 pkg-config amd64 0.29.1-0ubuntu2 [45.0 kB] Get:243 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 pybind11-dev all 2.2.4-1 [114 kB] Get:244 http://ftpmaster.internal/ubuntu disco/main amd64 python3-all amd64 3.7.1-1ubuntu1 [1108 B] Get:245 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3.7-dev amd64 3.7.2~rc1-1 [511 kB] Get:246 http://ftpmaster.internal/ubuntu disco/main amd64 python3-dev amd64 3.7.1-1ubuntu1 [1308 B] Get:247 http://ftpmaster.internal/ubuntu disco/main amd64 python3-all-dev amd64 3.7.1-1ubuntu1 [1112 B] Get:248 http://ftpmaster.internal/ubuntu disco/main amd64 python3-numpy amd64 1:1.14.5-1ubuntu8 [2027 kB] Get:249 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-mpi4py amd64 2.0.0-3build3 [425 kB] Get:250 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3-pkg-resources all 40.6.2-1 [99.6 kB] Get:251 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-dijitso all 2018.1.0-5 [23.9 kB] Get:252 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-mpmath all 1.0.0-1 [400 kB] Get:253 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 python3-pybind11 all 2.2.4-1 [5472 B] Get:254 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 python3-setuptools all 40.6.2-1 [251 kB] Get:255 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-sympy all 1.3-1 [3496 kB] Get:256 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-ufl all 2018.1.0-3 [153 kB] Get:257 http://ftpmaster.internal/ubuntu disco/universe amd64 swig3.0 amd64 3.0.12-1.2 [1098 kB] Get:258 http://ftpmaster.internal/ubuntu disco/universe amd64 swig amd64 3.0.12-1.2 [6464 B] Get:259 http://ftpmaster.internal/ubuntu disco/universe amd64 libeigen3-dev all 3.3.5-2 [813 kB] Get:260 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-fiat all 2018.1.0-4 [52.7 kB] Get:261 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-ffc all 2018.1.0-4 [221 kB] Get:262 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libdolfin-dev amd64 2018.1.0.post1-12build2 [189 kB] Get:263 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 libproj-dev amd64 5.2.0-1 [238 kB] Get:264 http://ftpmaster.internal/ubuntu disco/universe amd64 libtet1.5 amd64 1.5.0-5 [236 kB] Get:265 http://ftpmaster.internal/ubuntu disco/universe amd64 libtet1.5-dev amd64 1.5.0-5 [28.8 kB] Get:266 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-petsc4py amd64 3.9.1-5 [816 kB] Get:267 http://ftpmaster.internal/ubuntu disco/universe amd64 python3-slepc4py amd64 3.9.0-3 [211 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 203 MB in 8s (24.8 MB/s) Selecting previously unselected package libpython3.7-minimal:amd64. 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Setting up libmagic1:amd64 (1:5.34-2) ... Setting up librhash0:amd64 (1.3.6-3) ... Setting up libcroco3:amd64 (0.6.12-2) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libfftw3-quad3:amd64 (3.3.8-2) ... Setting up pkg-config (0.29.1-0ubuntu2) ... Setting up libblas3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg-turbo8-dev:amd64 (2.0.0-0ubuntu2) ... Setting up libevent-pthreads-2.1-6:amd64 (2.1.8-stable-4build1) ... Setting up openmpi-common (3.1.3-4) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up dwz (0.12-3) ... Setting up autotools-dev (20180224.1) ... Setting up libboost1.67-dev:amd64 (1.67.0-11) ... 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Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgmpxx4ldbl:amd64 (2:6.1.2+dfsg-4) ... Setting up libnl-3-200:amd64 (3.4.0-1) ... Setting up libboost-system1.67.0:amd64 (1.67.0-11) ... Setting up libfftw3-long3:amd64 (3.3.8-2) ... Setting up libmongoose2:amd64 (1:5.3.0+dfsg-1) ... Setting up libgfortran5:amd64 (8.2.0-12ubuntu1) ... Setting up libboost-regex1.67.0:amd64 (1.67.0-11) ... Setting up libpython2.7-stdlib:amd64 (2.7.15-5) ... Setting up autopoint (0.19.8.1-9) ... Setting up libmpdec2:amd64 (2.4.2-2) ... Setting up liblzo2-2:amd64 (2.10-0.1) ... Setting up libsz2:amd64 (1.0.2-1) ... Setting up proj-data (5.2.0-1) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-0ubuntu2) ... Setting up libfile-stripnondeterminism-perl (1.0.0-1) ... Setting up libjpeg8:amd64 (8c-2ubuntu8) ... 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Setting up libxml2-dev:amd64 (2.9.4+dfsg1-7ubuntu3) ... Setting up libhwloc-plugins:amd64 (1.11.11-2) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libboost-program-options1.67-dev:amd64 (1.67.0-11) ... Setting up libamd2:amd64 (1:5.3.0+dfsg-1) ... Setting up libboost-atomic1.67-dev:amd64 (1.67.0-11) ... Setting up libjpeg8-dev:amd64 (8c-2ubuntu8) ... Setting up libsuperlu-dev:amd64 (5.2.1+dfsg1-3build1) ... Setting up libjpeg-dev:amd64 (8c-2ubuntu8) ... Setting up libpython3.7:amd64 (3.7.2~rc1-1) ... Setting up libboost-chrono1.67.0:amd64 (1.67.0-11) ... Setting up libfftw3-dev:amd64 (3.3.8-2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libpython3.7-dev:amd64 (3.7.2~rc1-1) ... Setting up libboost-system1.67-dev:amd64 (1.67.0-11) ... Setting up libarpack2:amd64 (3.6.3-1) ... Setting up man-db (2.8.4-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython2-stdlib:amd64 (2.7.15-3) ... Setting up libkrb5-3:amd64 (1.16.1-1ubuntu1) ... Setting up libcgal13:amd64 (4.13-1ubuntu1) ... Setting up libboost-chrono1.67-dev:amd64 (1.67.0-11) ... Setting up libboost-date-time1.67-dev:amd64 (1.67.0-11) ... Setting up libkrb5-26-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libgfortran-8-dev:amd64 (8.2.0-12ubuntu1) ... Setting up libboost-math-dev:amd64 (1.67.0.1) ... Setting up libheimntlm0-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up libboost-program-options-dev:amd64 (1.67.0.1) ... Setting up libmpfr-dev:amd64 (4.0.1-2) ... Setting up libpython3-dev:amd64 (3.7.1-1ubuntu1) ... Setting up liblapack-dev:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libtool (2.4.6-6) ... Setting up libpython3-stdlib:amd64 (3.7.1-1ubuntu1) ... Setting up libibverbs1:amd64 (21.0-1) ... Setting up libboost-serialization-dev:amd64 (1.67.0.1) ... Setting up libboost-filesystem1.67-dev:amd64 (1.67.0-11) ... Setting up libproj-dev:amd64 (5.2.0-1) ... Setting up libboost-timer1.67.0:amd64 (1.67.0-11) ... Setting up libboost-timer1.67-dev:amd64 (1.67.0-11) ... Setting up libltdl-dev:amd64 (2.4.6-6) ... Setting up po-debconf (1.0.21) ... Setting up python3 (3.7.1-1ubuntu1) ... Setting up libboost-thread1.67-dev:amd64 (1.67.0-11) ... Setting up libhwloc-dev:amd64 (1.11.11-2) ... Setting up libboost-chrono-dev:amd64 (1.67.0.1) ... Setting up python3-numpy (1:1.14.5-1ubuntu8) ... Setting up gfortran-8 (8.2.0-12ubuntu1) ... Setting up libboost-system-dev:amd64 (1.67.0.1) ... Setting up libboost-regex1.67-dev:amd64 (1.67.0-11) ... Setting up libklu1:amd64 (1:5.3.0+dfsg-1) ... Setting up libparpack2:amd64 (3.6.3-1) ... Setting up libnl-route-3-dev:amd64 (3.4.0-1) ... Setting up libboost-timer-dev:amd64 (1.67.0.1) ... Setting up libpmix2:amd64 (3.0.2-2) ... Setting up librdmacm1:amd64 (21.0-1) ... Setting up python3-pkg-resources (40.6.2-1) ... Setting up python3.7-dev (3.7.2~rc1-1) ... Setting up libboost-filesystem-dev:amd64 (1.67.0.1) ... Setting up python3-mpmath (1.0.0-1) ... Setting up python3-ufl (2018.1.0-3) ... Setting up python2 (2.7.15-3) ... Setting up libcholmod3:amd64 (1:5.3.0+dfsg-1) ... Setting up libgssapi-krb5-2:amd64 (1.16.1-1ubuntu1) ... Setting up libpython-stdlib:amd64 (2.7.15-3) ... Setting up libpython3-all-dev:amd64 (3.7.1-1ubuntu1) ... Setting up ibverbs-providers:amd64 (21.0-1) ... Setting up libarpack2-dev:amd64 (3.6.3-1) ... Setting up python3-sympy (1.3-1) ... Setting up libgssapi3-heimdal:amd64 (7.5.0+dfsg-2.1) ... Setting up python3-lib2to3 (3.7.1-1ubuntu4) ... Setting up openssh-client (1:7.9p1-4) ... Setting up libibverbs-dev:amd64 (21.0-1) ... Setting up python3-distutils (3.7.1-1ubuntu4) ... Setting up python (2.7.15-3) ... Setting up libspqr2:amd64 (1:5.3.0+dfsg-1) ... Setting up python3-pybind11 (2.2.4-1) ... Setting up gfortran (4:8.2.0-2ubuntu2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up python3-fiat (2018.1.0-4) ... Setting up libboost-thread-dev:amd64 (1.67.0.1) ... Setting up libfabric1 (1.6.1-5) ... Setting up libboost-iostreams1.67-dev:amd64 (1.67.0-11) ... Setting up libumfpack5:amd64 (1:5.3.0+dfsg-1) ... Setting up libcgal-dev:amd64 (4.13-1ubuntu1) ... Setting up libldap-2.4-2:amd64 (2.4.46+dfsg-5ubuntu3) ... Setting up libboost-iostreams-dev:amd64 (1.67.0.1) ... Setting up libsuitesparse-dev:amd64 (1:5.3.0+dfsg-1) ... Setting up python3-setuptools (40.6.2-1) ... Setting up dh-python (3.20180927ubuntu2) ... Setting up libopenmpi3:amd64 (3.1.3-4) ... Setting up libcombblas1.16.0:amd64 (1.6.2-3) ... Setting up libcurl4:amd64 (7.61.0-1ubuntu2.2) ... Setting up libsuperlu-dist6:amd64 (6.1.0+dfsg1-1) ... Setting up libptscotch-6.0 (6.0.6-2) ... Setting up libfftw3-mpi3:amd64 (3.3.8-2) ... Setting up python3-dev (3.7.1-1ubuntu1) ... Setting up libspooles2.2:amd64 (2.2-13) ... Setting up openmpi-bin (3.1.3-4) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up python3-all (3.7.1-1ubuntu1) ... Setting up libhypre-2.15.1:amd64 (2.15.1-2) ... Setting up libsuperlu-dist-dev:amd64 (6.1.0+dfsg1-1) ... Setting up python3-mpi4py (2.0.0-3build3) ... Setting up libhdf5-openmpi-103:amd64 (1.10.4+repack-1) ... Setting up cmake (3.12.3-3) ... Setting up libboost-mpi1.67.0 (1.67.0-11) ... Setting up mpi-default-bin (1.13) ... Setting up libfftw3-mpi-dev:amd64 (3.3.8-2) ... Setting up libscalapack-openmpi2.0 (2.0.2-7build2) ... Setting up python3-all-dev (3.7.1-1ubuntu1) ... Setting up libopenmpi-dev:amd64 (3.1.3-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up python3-dijitso (2018.1.0-5) ... Setting up mpi-default-dev (1.13) ... Setting up libscalapack-openmpi-dev (2.0.2-7build2) ... Setting up libhdf5-openmpi-dev (1.10.4+repack-1) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libscotch-dev (6.0.6-2) ... Setting up libspooles-dev:amd64 (2.2-13) ... Setting up libboost-mpi1.67-dev (1.67.0-11) ... Setting up python3-ffc (2018.1.0-4) ... update-alternatives: using /usr/lib/python3/dist-packages/ffc/backends/ufc/ufc.h to provide /usr/include/ufc.h (ufc.h) in auto mode Setting up libparpack2-dev:amd64 (3.6.3-1) ... Setting up libmumps-5.1.2:amd64 (5.1.2-4build2) ... Setting up libptscotch-dev (6.0.6-2) ... Setting up libhypre-dev:amd64 (2.15.1-2) ... Setting up libscalapack-mpi-dev (2.0.2-7build2) ... Setting up libmumps-dev:amd64 (5.1.2-4build2) ... Setting up libhdf5-mpi-dev (1.10.4+repack-1) ... Setting up libboost-mpi-dev (1.67.0.1) ... Setting up libpetsc-real3.9:amd64 (3.9.4+dfsg1-3build1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.9.4 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.9 (libpetsc.so.3.9) in auto mode Setting up libpetsc-real3.9-dev:amd64 (3.9.4+dfsg1-3build1) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.9/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.9.4 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.9/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.9 (petsc3.9) in auto mode Setting up libslepc-real3.9 (3.9.2+dfsg1-2build3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.9.2 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.9 (libslepc.so.3.9) in auto mode Setting up python3-petsc4py (3.9.1-5) ... Setting up python3-slepc4py (3.9.0-3) ... Setting up libslepc-real3.9-dev (3.9.2+dfsg1-2build3) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.9/x86_64-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.9.2 to provide /usr/lib/x86_64-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.9/x86_64-linux-gnu-real to provide /usr/lib/slepcdir/3.9 (slepc3.9) in auto mode Setting up libdolfin2018.1:amd64 (2018.1.0.post1-12build2) ... Setting up libdolfin-dev (2018.1.0.post1-12build2) ... Setting up dh-strip-nondeterminism (1.0.0-1) ... Setting up debhelper (11.5.3ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up sbuild-build-depends-mshr-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-140-generic amd64 (x86_64) Toolchain package versions: binutils_2.31.1-10ubuntu1 dpkg-dev_1.19.2ubuntu2 g++-8_8.2.0-12ubuntu1 gcc-8_8.2.0-12ubuntu1 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-12ubuntu1 libstdc++6_8.2.0-12ubuntu1 linux-libc-dev_4.19.0-9.10 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 apt_1.8.0~alpha2ubuntu1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.45 bash_4.4.18-2ubuntu3 binutils_2.31.1-10ubuntu1 binutils-common_2.31.1-10ubuntu1 binutils-x86-64-linux-gnu_2.31.1-10ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.32-0.1ubuntu2 build-essential_12.5ubuntu2 bzip2_1.0.6-9 ca-certificates_20180409 cmake_3.12.3-3 cmake-data_3.12.3-3 coreutils_8.28-1ubuntu2 cpp_4:8.2.0-2ubuntu2 cpp-8_8.2.0-12ubuntu1 dash_0.5.10.2-1 debconf_1.5.69 debhelper_11.5.3ubuntu1 debianutils_4.8.6 dh-autoreconf_19 dh-python_3.20180927ubuntu2 dh-strip-nondeterminism_1.0.0-1 diffutils_1:3.6-1 dmsetup_2:1.02.145-4.1ubuntu4 dpkg_1.19.2ubuntu2 dpkg-dev_1.19.2ubuntu2 dwz_0.12-3 e2fslibs_1.44.4-2ubuntu1 e2fsprogs_1.44.4-2ubuntu1 fakeroot_1.23-1 fdisk_2.32-0.1ubuntu2 file_1:5.34-2 findutils_4.6.0+git+20181018-1 g++_4:8.2.0-2ubuntu2 g++-8_8.2.0-12ubuntu1 gcc_4:8.2.0-2ubuntu2 gcc-8_8.2.0-12ubuntu1 gcc-8-base_8.2.0-12ubuntu1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gfortran_4:8.2.0-2ubuntu2 gfortran-8_8.2.0-12ubuntu1 gpg_2.2.8-3ubuntu1 gpg-agent_2.2.8-3ubuntu1 gpgconf_2.2.8-3ubuntu1 gpgv_2.2.8-3ubuntu1 grep_3.1-3 groff-base_1.22.3-10 gzip_1.6-5ubuntu2 hostname_3.21 ibverbs-providers_21.0-1 icu-devtools_63.1-5 init_1.56 init-system-helpers_1.56 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libaec-dev_1.0.2-1 libaec0_1.0.2-1 libamd2_1:5.3.0+dfsg-1 libapparmor1_2.12-4ubuntu10 libapt-pkg5.0_1.8.0~alpha2ubuntu1 libarchive-zip-perl_1.64-1 libarchive13_3.2.2-5 libargon2-1_0~20171227-0.1 libarpack2_3.6.3-1 libarpack2-dev_3.6.3-1 libasan5_8.2.0-12ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-2.1 libassuan0_2.5.1-2 libatomic1_8.2.0-12ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.8.3-1ubuntu3 libaudit1_1:2.8.3-1ubuntu3 libbinutils_2.31.1-10ubuntu1 libblas-dev_3.8.0-2 libblas3_3.8.0-2 libblkid1_2.32-0.1ubuntu2 libboost-atomic1.67-dev_1.67.0-11 libboost-atomic1.67.0_1.67.0-11 libboost-chrono-dev_1.67.0.1 libboost-chrono1.67-dev_1.67.0-11 libboost-chrono1.67.0_1.67.0-11 libboost-date-time1.67-dev_1.67.0-11 libboost-date-time1.67.0_1.67.0-11 libboost-dev_1.67.0.1 libboost-filesystem-dev_1.67.0.1 libboost-filesystem1.67-dev_1.67.0-11 libboost-filesystem1.67.0_1.67.0-11 libboost-iostreams-dev_1.67.0.1 libboost-iostreams1.67-dev_1.67.0-11 libboost-iostreams1.67.0_1.67.0-11 libboost-math-dev_1.67.0.1 libboost-math1.67-dev_1.67.0-11 libboost-math1.67.0_1.67.0-11 libboost-mpi-dev_1.67.0.1 libboost-mpi1.67-dev_1.67.0-11 libboost-mpi1.67.0_1.67.0-11 libboost-program-options-dev_1.67.0.1 libboost-program-options1.67-dev_1.67.0-11 libboost-program-options1.67.0_1.67.0-11 libboost-regex1.67-dev_1.67.0-11 libboost-regex1.67.0_1.67.0-11 libboost-serialization-dev_1.67.0.1 libboost-serialization1.67-dev_1.67.0-11 libboost-serialization1.67.0_1.67.0-11 libboost-system-dev_1.67.0.1 libboost-system1.67-dev_1.67.0-11 libboost-system1.67.0_1.67.0-11 libboost-thread-dev_1.67.0.1 libboost-thread1.67-dev_1.67.0-11 libboost-thread1.67.0_1.67.0-11 libboost-timer-dev_1.67.0.1 libboost-timer1.67-dev_1.67.0-11 libboost-timer1.67.0_1.67.0-11 libboost1.67-dev_1.67.0-11 libbsd0_0.9.1-1 libbtf1_1:5.3.0+dfsg-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-0ubuntu1 libc-dev-bin_2.28-0ubuntu1 libc6_2.28-0ubuntu1 libc6-dev_2.28-0ubuntu1 libcamd2_1:5.3.0+dfsg-1 libcap-ng0_0.7.9-1build1 libcap2_1:2.25-1.2 libcc1-0_8.2.0-12ubuntu1 libccolamd2_1:5.3.0+dfsg-1 libcgal-dev_4.13-1ubuntu1 libcgal13_4.13-1ubuntu1 libcholmod3_1:5.3.0+dfsg-1 libcolamd2_1:5.3.0+dfsg-1 libcom-err2_1.44.4-2ubuntu1 libcombblas1.16.0_1.6.2-3 libcomerr2_1.44.4-2ubuntu1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.4-2ubuntu2 libcurl4_7.61.0-1ubuntu2.2 libcxsparse3_1:5.3.0+dfsg-1 libdb5.3_5.3.28+dfsg1-0.2 libdebconfclient0_0.244ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu4 libdolfin-dev_2018.1.0.post1-12build2 libdolfin2018.1_2018.1.0.post1-12build2 libdpkg-perl_1.19.2ubuntu2 libedit2_3.1-20181209-1 libeigen3-dev_3.3.5-2 libelf1_0.175-1 libevent-2.1-6_2.1.8-stable-4build1 libevent-core-2.1-6_2.1.8-stable-4build1 libevent-pthreads-2.1-6_2.1.8-stable-4build1 libexpat1_2.2.6-1 libexpat1-dev_2.2.6-1 libext2fs2_1.44.4-2ubuntu1 libfabric1_1.6.1-5 libfakeroot_1.23-1 libfdisk1_2.32-0.1ubuntu2 libffi6_3.2.1-9 libfftw3-bin_3.3.8-2 libfftw3-dev_3.3.8-2 libfftw3-double3_3.3.8-2 libfftw3-long3_3.3.8-2 libfftw3-mpi-dev_3.3.8-2 libfftw3-mpi3_3.3.8-2 libfftw3-quad3_3.3.8-2 libfftw3-single3_3.3.8-2 libfile-stripnondeterminism-perl_1.0.0-1 libgcc-8-dev_8.2.0-12ubuntu1 libgcc1_1:8.2.0-12ubuntu1 libgcrypt20_1.8.4-3ubuntu1 libgdbm-compat4_1.18.1-2 libgdbm5_1.14.1-6 libgdbm6_1.18.1-2 libgfortran-8-dev_8.2.0-12ubuntu1 libgfortran5_8.2.0-12ubuntu1 libglib2.0-0_2.58.1-2 libgmp-dev_2:6.1.2+dfsg-4 libgmp10_2:6.1.2+dfsg-4 libgmpxx4ldbl_2:6.1.2+dfsg-4 libgnutls30_3.6.4-2ubuntu2 libgomp1_8.2.0-12ubuntu1 libgpg-error0_1.32-3 libgraphblas2_1:5.3.0+dfsg-1 libgssapi-krb5-2_1.16.1-1ubuntu1 libgssapi3-heimdal_7.5.0+dfsg-2.1 libhcrypto4-heimdal_7.5.0+dfsg-2.1 libhdf5-mpi-dev_1.10.4+repack-1 libhdf5-openmpi-103_1.10.4+repack-1 libhdf5-openmpi-dev_1.10.4+repack-1 libheimbase1-heimdal_7.5.0+dfsg-2.1 libheimntlm0-heimdal_7.5.0+dfsg-2.1 libhogweed4_3.4.1~rc1-1 libhwloc-dev_1.11.11-2 libhwloc-plugins_1.11.11-2 libhwloc5_1.11.11-2 libhx509-5-heimdal_7.5.0+dfsg-2.1 libhypre-2.15.1_2.15.1-2 libhypre-dev_2.15.1-2 libibverbs-dev_21.0-1 libibverbs1_21.0-1 libicu-dev_63.1-5 libicu63_63.1-5 libidn11_1.33-2.2ubuntu1 libidn2-0_2.0.5-1 libip4tc0_1.6.1-2ubuntu3 libisl19_0.20-2 libitm1_8.2.0-12ubuntu1 libjpeg-dev_8c-2ubuntu8 libjpeg-turbo8_2.0.0-0ubuntu2 libjpeg-turbo8-dev_2.0.0-0ubuntu2 libjpeg8_8c-2ubuntu8 libjpeg8-dev_8c-2ubuntu8 libjson-c3_0.12.1-1.3 libjsoncpp1_1.7.4-3 libk5crypto3_1.16.1-1ubuntu1 libkeyutils1_1.5.9-9.3 libklu1_1:5.3.0+dfsg-1 libkmod2_25-1ubuntu2 libkrb5-26-heimdal_7.5.0+dfsg-2.1 libkrb5-3_1.16.1-1ubuntu1 libkrb5support0_1.16.1-1ubuntu1 liblapack-dev_3.8.0-2 liblapack3_3.8.0-2 libldap-2.4-2_2.4.46+dfsg-5ubuntu3 libldap-common_2.4.46+dfsg-5ubuntu3 libldl2_1:5.3.0+dfsg-1 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 liblsan0_8.2.0-12ubuntu1 libltdl-dev_2.4.6-6 libltdl7_2.4.6-6 liblz4-1_1.8.2-1ubuntu1 liblzma5_5.2.2-1.3 liblzo2-2_2.10-0.1 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmetis5_5.1.0.dfsg-5 libmongoose2_1:5.3.0+dfsg-1 libmount1_2.32-0.1ubuntu2 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libslepc-real3.9_3.9.2+dfsg1-2build3 libslepc-real3.9-dev_3.9.2+dfsg1-2build3 libsmartcols1_2.32-0.1ubuntu2 libspooles-dev_2.2-13 libspooles2.2_2.2-13 libspqr2_1:5.3.0+dfsg-1 libsqlite3-0_3.26.0-3 libss2_1.44.4-2ubuntu1 libssl-dev_1.1.1a-1ubuntu2 libssl1.1_1.1.1a-1ubuntu2 libstdc++-8-dev_8.2.0-12ubuntu1 libstdc++6_8.2.0-12ubuntu1 libsuitesparse-dev_1:5.3.0+dfsg-1 libsuitesparseconfig5_1:5.3.0+dfsg-1 libsuperlu-dev_5.2.1+dfsg1-3build1 libsuperlu-dist-dev_6.1.0+dfsg1-1 libsuperlu-dist6_6.1.0+dfsg1-1 libsuperlu5_5.2.1+dfsg1-3build1 libsystemd0_239-7ubuntu15 libsz2_1.0.2-1 libtasn1-6_4.13-3 libtet1.5_1.5.0-5 libtet1.5-dev_1.5.0-5 libtinfo6_6.1+20180210-4ubuntu1 libtool_2.4.6-6 libtsan0_8.2.0-12ubuntu1 libubsan1_8.2.0-12ubuntu1 libudev1_239-7ubuntu15 libumfpack5_1:5.3.0+dfsg-1 libunistring2_0.9.10-1ubuntu1 libusb-0.1-4_2:0.1.12-32 libuuid1_2.32-0.1ubuntu2 libuv1_1.24.0-1 libwind0-heimdal_7.5.0+dfsg-2.1 libxml2_2.9.4+dfsg1-7ubuntu3 libxml2-dev_2.9.4+dfsg1-7ubuntu3 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python3-all_3.7.1-1ubuntu1 python3-all-dev_3.7.1-1ubuntu1 python3-dev_3.7.1-1ubuntu1 python3-dijitso_2018.1.0-5 python3-distutils_3.7.1-1ubuntu4 python3-ffc_2018.1.0-4 python3-fiat_2018.1.0-4 python3-lib2to3_3.7.1-1ubuntu4 python3-minimal_3.7.1-1ubuntu1 python3-mpi4py_2.0.0-3build3 python3-mpmath_1.0.0-1 python3-numpy_1:1.14.5-1ubuntu8 python3-petsc4py_3.9.1-5 python3-pkg-resources_40.6.2-1 python3-pybind11_2.2.4-1 python3-setuptools_40.6.2-1 python3-slepc4py_3.9.0-3 python3-sympy_1.3-1 python3-ufl_2018.1.0-3 python3.7_3.7.2~rc1-1 python3.7-dev_3.7.2~rc1-1 python3.7-minimal_3.7.2~rc1-1 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-mshr-dummy_0.invalid.0 sed_4.5-2 sensible-utils_0.0.12 swig_3.0.12-1.2 swig3.0_3.0.12-1.2 systemd_239-7ubuntu15 systemd-sysv_239-7ubuntu15 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 tar_1.30+dfsg-3 tzdata_2018g-1 ubuntu-keyring_2018.09.18.1 util-linux_2.32-0.1ubuntu2 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 zlib1g-dev_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Wed Dec 12 11:51:16 2018 UTC gpgv: using RSA key 92978A6E195E4921825F7FF0F34F09744E9F5DD9 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./mshr_2018.1.0+dfsg1-7build1.dsc dpkg-source: info: extracting mshr in mshr-2018.1.0+dfsg1 dpkg-source: info: unpacking mshr_2018.1.0+dfsg1.orig.tar.gz dpkg-source: info: unpacking mshr_2018.1.0+dfsg1-7build1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying demos_update.patch dpkg-source: info: applying cmake_config_in_lib.patch dpkg-source: info: applying build_python.patch dpkg-source: info: applying depython_main_build.patch dpkg-source: info: applying test_controls.diff dpkg-source: info: applying fix_mesh3_internal.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-15767726 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-15767726 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-15767726 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package mshr dpkg-buildpackage: info: source version 2018.1.0+dfsg1-7build1 dpkg-buildpackage: info: source distribution disco dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --buildsystem=cmake \ --with python3 debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/mshr-2018.1.0+dfsg1' dh_auto_clean rm -rf python/build* make[1]: Leaving directory '/<>/mshr-2018.1.0+dfsg1' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules build dh build --buildsystem=cmake \ --with python3 dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/mshr-2018.1.0+dfsg1' dh_auto_configure -- -D CMAKE_BUILD_TYPE:STRING=Release -D BUILD_SHARED_LIBS:BOOL=ON -D USE_SYSTEM_CGAL:BOOL=ON -D USE_SYSTEM_TETGEN:BOOL=ON -D ENABLE_MSHRABLE:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D INSTALL_LIB_DIR:PATH=lib/x86_64-linux-gnu -D CMAKE_CXX_FLAGS:STRING="-fpermissive -O2 -fdebug-prefix-map=/<>/mshr-2018.1.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" /<>/mshr-2018.1.0+dfsg1/ ;\ cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D CMAKE_BUILD_TYPE:STRING=Release -D BUILD_SHARED_LIBS:BOOL=ON -D USE_SYSTEM_CGAL:BOOL=ON -D USE_SYSTEM_TETGEN:BOOL=ON -D ENABLE_MSHRABLE:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D INSTALL_LIB_DIR:PATH=lib/x86_64-linux-gnu -D "CMAKE_CXX_FLAGS:STRING=-fpermissive -O2 -fdebug-prefix-map=/<>/mshr-2018.1.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" /<>/mshr-2018.1.0\+dfsg1/ .. -- The C compiler identification is GNU 8.2.0 -- The CXX compiler identification is GNU 8.2.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- __cplusplus is 201402 -- --> Do not link with Boost.Thread -- Boost version: 1.67.0 -- Boost include dirs: /usr/include -- Boost libraries: -- Found TETGEN: /usr/lib/x86_64-linux-gnu/libtet.so -- Boost version: 1.67.0 -- Found the following Boost libraries: -- system -- filesystem -- program_options -- Targetting Unix Makefiles -- Using /usr/bin/c++ compiler. -- Found GMP: /usr/lib/x86_64-linux-gnu/libgmp.so -- Found MPFR: /usr/lib/x86_64-linux-gnu/libmpfr.so -- Found Eigen3: /usr/include/eigen3 (found suitable version "3.3.5", minimum required is "2.91.0") -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.1") -- Checking for one of the modules 'craypetsc_real;PETSc' -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of PetscInt -- Check size of PetscInt - failed -- Checking for one of the modules 'crayslepc_real;SLEPc' -- Testing disabled -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu make[1]: Leaving directory '/<>/mshr-2018.1.0+dfsg1' dh_auto_build -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make V=1 -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' /usr/bin/cmake -H/<>/mshr-2018.1.0+dfsg1 -B/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/mshr.dir/build.make CMakeFiles/mshr.dir/depend make[3]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' cd /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/mshr-2018.1.0+dfsg1 /<>/mshr-2018.1.0+dfsg1 /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/mshr.dir/DependInfo.cmake --color= Scanning dependencies of target mshr make[3]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/mshr.dir/build.make CMakeFiles/mshr.dir/build make[3]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' [ 4%] Building CXX object CMakeFiles/mshr.dir/src/ASCFileReader.cpp.o /usr/bin/c++ -DCGAL_HEADER_ONLY -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -DTETLIBRARY -D_FORTIFY_SOURCE=2 -Dmshr_EXPORTS -I/<>/mshr-2018.1.0+dfsg1/include -I/include -I/usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.9/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.9/x86_64-linux-gnu-real/include -isystem /usr/include/suitesparse -isystem /usr/include/superlu -isystem /usr/include/superlu-dist -isystem /usr/include/hypre -isystem /usr/include/scotch -fpermissive -O2 -fdebug-prefix-map=/<>/mshr-2018.1.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++0x -Wall -O3 -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/mshr.dir/src/ASCFileReader.cpp.o -c /<>/mshr-2018.1.0+dfsg1/src/ASCFileReader.cpp [ 9%] Building CXX object CMakeFiles/mshr.dir/src/CSGCGALDomain2D.cpp.o /usr/bin/c++ -DCGAL_HEADER_ONLY -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -DTETLIBRARY -D_FORTIFY_SOURCE=2 -Dmshr_EXPORTS -I/<>/mshr-2018.1.0+dfsg1/include -I/include -I/usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.9/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.9/x86_64-linux-gnu-real/include -isystem /usr/include/suitesparse -isystem /usr/include/superlu -isystem /usr/include/superlu-dist -isystem /usr/include/hypre -isystem /usr/include/scotch -fpermissive -O2 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-I/<>/mshr-2018.1.0+dfsg1/include -I/include -I/usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.9/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.9/x86_64-linux-gnu-real/include -isystem /usr/include/suitesparse -isystem /usr/include/superlu -isystem /usr/include/superlu-dist -isystem /usr/include/hypre -isystem /usr/include/scotch -fpermissive -O2 -fdebug-prefix-map=/<>/mshr-2018.1.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++0x -Wall -O3 -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/mshr.dir/src/STLFileReader.cpp.o -c /<>/mshr-2018.1.0+dfsg1/src/STLFileReader.cpp [ 77%] Building CXX object CMakeFiles/mshr.dir/src/SurfaceConsistency.cpp.o /usr/bin/c++ -DCGAL_HEADER_ONLY -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -DTETLIBRARY -D_FORTIFY_SOURCE=2 -Dmshr_EXPORTS -I/<>/mshr-2018.1.0+dfsg1/include -I/include -I/usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.9/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.9/x86_64-linux-gnu-real/include -isystem /usr/include/suitesparse -isystem /usr/include/superlu -isystem /usr/include/superlu-dist -isystem /usr/include/hypre -isystem /usr/include/scotch -fpermissive -O2 -fdebug-prefix-map=/<>/mshr-2018.1.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++0x -Wall -O3 -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/mshr.dir/src/SurfaceConsistency.cpp.o -c /<>/mshr-2018.1.0+dfsg1/src/SurfaceConsistency.cpp [ 81%] Building CXX object CMakeFiles/mshr.dir/src/SurfaceReconstruction.cpp.o /usr/bin/c++ -DCGAL_HEADER_ONLY -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -DTETLIBRARY -D_FORTIFY_SOURCE=2 -Dmshr_EXPORTS -I/<>/mshr-2018.1.0+dfsg1/include -I/include -I/usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.9/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.9/x86_64-linux-gnu-real/include -isystem /usr/include/suitesparse -isystem /usr/include/superlu -isystem /usr/include/superlu-dist -isystem /usr/include/hypre -isystem /usr/include/scotch -fpermissive -O2 -fdebug-prefix-map=/<>/mshr-2018.1.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++0x -Wall -O3 -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/mshr.dir/src/SurfaceReconstruction.cpp.o -c /<>/mshr-2018.1.0+dfsg1/src/SurfaceReconstruction.cpp [ 86%] Building CXX object CMakeFiles/mshr.dir/src/TetgenMeshGenerator3D.cpp.o /usr/bin/c++ -DCGAL_HEADER_ONLY -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -DTETLIBRARY -D_FORTIFY_SOURCE=2 -Dmshr_EXPORTS -I/<>/mshr-2018.1.0+dfsg1/include -I/include -I/usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.9/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.9/x86_64-linux-gnu-real/include -isystem /usr/include/suitesparse -isystem /usr/include/superlu -isystem /usr/include/superlu-dist -isystem /usr/include/hypre -isystem /usr/include/scotch -fpermissive -O2 -fdebug-prefix-map=/<>/mshr-2018.1.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++0x -Wall -O3 -DNDEBUG -fPIC -std=c++11 -o CMakeFiles/mshr.dir/src/TetgenMeshGenerator3D.cpp.o -c /<>/mshr-2018.1.0+dfsg1/src/TetgenMeshGenerator3D.cpp /<>/mshr-2018.1.0+dfsg1/src/SurfaceReconstruction.cpp: In static member function ‘static void mshr::SurfaceReconstruction::reconstruct(const std::vector&, const std::vector&, std::vector >&, std::vector >&, double)’: /<>/mshr-2018.1.0+dfsg1/src/SurfaceReconstruction.cpp:234:74: warning: ‘typename CGAL::Kernel_traits::value_type>::Kernel::FT CGAL::compute_average_spacing(InputIterator, InputIterator, unsigned int) [with ConcurrencyTag = CGAL::Sequential_tag; InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; typename CGAL::Kernel_traits::value_type>::Kernel::FT = double]’ is deprecated: you are using the deprecated V1 API of CGAL::compute_average_spacing(), please update your code [-Wdeprecated-declarations] 6 /* knn = 1 ring */); ^ In file included from /usr/include/CGAL/Poisson_reconstruction_function.h:52, from /<>/mshr-2018.1.0+dfsg1/src/SurfaceReconstruction.cpp:29: /usr/include/CGAL/compute_average_spacing.h:343:1: note: declared here compute_average_spacing( ^~~~~~~~~~~~~~~~~~~~~~~ /<>/mshr-2018.1.0+dfsg1/src/SurfaceReconstruction.cpp:234:74: warning: ‘typename CGAL::Kernel_traits::value_type>::Kernel::FT CGAL::compute_average_spacing(InputIterator, InputIterator, unsigned int) [with ConcurrencyTag = CGAL::Sequential_tag; InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; typename CGAL::Kernel_traits::value_type>::Kernel::FT = double]’ is deprecated: you are using the deprecated V1 API of CGAL::compute_average_spacing(), please update your code [-Wdeprecated-declarations] 6 /* knn = 1 ring */); ^ In file included from /usr/include/CGAL/Poisson_reconstruction_function.h:52, from /<>/mshr-2018.1.0+dfsg1/src/SurfaceReconstruction.cpp:29: /usr/include/CGAL/compute_average_spacing.h:343:1: note: declared here compute_average_spacing( ^~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Linking CXX shared library libmshr.so /usr/bin/cmake -E cmake_link_script CMakeFiles/mshr.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -fpermissive -O2 -fdebug-prefix-map=/<>/mshr-2018.1.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++0x -Wall -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -Wl,-soname,libmshr.so.2018.1 -o libmshr.so.2018.1.0 CMakeFiles/mshr.dir/src/ASCFileReader.cpp.o CMakeFiles/mshr.dir/src/CSGCGALDomain2D.cpp.o CMakeFiles/mshr.dir/src/CSGCGALDomain3D.cpp.o CMakeFiles/mshr.dir/src/CSGCGALMeshGenerator2D.cpp.o CMakeFiles/mshr.dir/src/CSGCGALMeshGenerator3D.cpp.o CMakeFiles/mshr.dir/src/CSGGeometries3D.cpp.o CMakeFiles/mshr.dir/src/CSGGeometry.cpp.o CMakeFiles/mshr.dir/src/CSGOperators.cpp.o CMakeFiles/mshr.dir/src/CSGPrimitives2D.cpp.o CMakeFiles/mshr.dir/src/CSGPrimitives3D.cpp.o CMakeFiles/mshr.dir/src/DolfinMeshUtils.cpp.o CMakeFiles/mshr.dir/src/GlobalInitializer.cpp.o CMakeFiles/mshr.dir/src/MeshGenerator.cpp.o CMakeFiles/mshr.dir/src/Meshes.cpp.o CMakeFiles/mshr.dir/src/OFFFileReader.cpp.o CMakeFiles/mshr.dir/src/STLFileReader.cpp.o CMakeFiles/mshr.dir/src/SurfaceConsistency.cpp.o CMakeFiles/mshr.dir/src/SurfaceReconstruction.cpp.o CMakeFiles/mshr.dir/src/TetgenMeshGenerator3D.cpp.o /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/libboost_filesystem.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libmpfr.so -ltet /usr/lib/x86_64-linux-gnu/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/libboost_filesystem.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libmpfr.so -ltet /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.9/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.9/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/bin/cmake -E cmake_symlink_library libmshr.so.2018.1.0 libmshr.so.2018.1 libmshr.so make[3]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' [ 90%] Built target mshr make -f CMakeFiles/mshrable.dir/build.make CMakeFiles/mshrable.dir/depend make[3]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' cd /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/mshr-2018.1.0+dfsg1 /<>/mshr-2018.1.0+dfsg1 /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/mshrable.dir/DependInfo.cmake --color= Scanning dependencies of target mshrable make[3]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/mshrable.dir/build.make CMakeFiles/mshrable.dir/build make[3]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' [ 95%] Building CXX object CMakeFiles/mshrable.dir/app/mshrable.cpp.o /usr/bin/c++ -DCGAL_HEADER_ONLY -DDOLFIN_VERSION=\"2018.1.0\" -DHAS_CHOLMOD -DHAS_HDF5 -DHAS_MPI -DHAS_PETSC -DHAS_SCOTCH -DHAS_SLEPC -DHAS_UMFPACK -DHAS_ZLIB -DNDEBUG -DTETLIBRARY -D_FORTIFY_SOURCE=2 -I/<>/mshr-2018.1.0+dfsg1/include -I/include -I/usr/include/x86_64-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/slepcdir/slepc3.9/x86_64-linux-gnu-real/include -isystem /usr/lib/petscdir/petsc3.9/x86_64-linux-gnu-real/include -isystem /usr/include/suitesparse -isystem /usr/include/superlu -isystem /usr/include/superlu-dist -isystem /usr/include/hypre -isystem /usr/include/scotch -fpermissive -O2 -fdebug-prefix-map=/<>/mshr-2018.1.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++0x -Wall -O3 -DNDEBUG -std=c++11 -o CMakeFiles/mshrable.dir/app/mshrable.cpp.o -c /<>/mshr-2018.1.0+dfsg1/app/mshrable.cpp [100%] Linking CXX executable mshrable /usr/bin/cmake -E cmake_link_script CMakeFiles/mshrable.dir/link.txt --verbose=1 /usr/bin/c++ -fpermissive -O2 -fdebug-prefix-map=/<>/mshr-2018.1.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++0x -Wall -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro CMakeFiles/mshrable.dir/app/mshrable.cpp.o -o mshrable libmshr.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libdolfin.so.2018.1.0 /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/libboost_filesystem.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so /usr/lib/x86_64-linux-gnu/libboost_timer.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm /usr/lib/slepcdir/slepc3.9/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.9/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libmpfr.so -ltet /usr/lib/x86_64-linux-gnu/libboost_system.so /usr/lib/x86_64-linux-gnu/libboost_filesystem.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so make[3]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' [100%] Built target mshrable make[2]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' dh_auto_test -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make V=1 -j4 test ARGS\+=-j4 make[1]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process -j4 Test project /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu No tests were found!!! make[1]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=cmake \ --with python3 dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_installdirs -O--buildsystem=cmake debian/rules override_dh_auto_install make[1]: Entering directory '/<>/mshr-2018.1.0+dfsg1' dh_auto_install cd obj-x86_64-linux-gnu && make V=1 -j4 install DESTDIR=/<>/mshr-2018.1.0\+dfsg1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' /usr/bin/cmake -H/<>/mshr-2018.1.0+dfsg1 -B/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/mshr.dir/build.make CMakeFiles/mshr.dir/depend make[4]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' cd /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/mshr-2018.1.0+dfsg1 /<>/mshr-2018.1.0+dfsg1 /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/mshr.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/mshr.dir/build.make CMakeFiles/mshr.dir/build make[4]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'CMakeFiles/mshr.dir/build'. make[4]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' [ 90%] Built target mshr make -f CMakeFiles/mshrable.dir/build.make CMakeFiles/mshrable.dir/depend make[4]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' cd /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/mshr-2018.1.0+dfsg1 /<>/mshr-2018.1.0+dfsg1 /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/mshrable.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/mshrable.dir/build.make CMakeFiles/mshrable.dir/build make[4]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'CMakeFiles/mshrable.dir/build'. make[4]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' [100%] Built target mshrable make[3]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libmshr.so.2018.1.0 -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libmshr.so.2018.1 -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libmshr.so -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/bin/mshrable -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/OFFFileReader.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/STLFileReader.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/ASCFileReader.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/CSGPrimitives3D.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/SurfaceConsistency.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/MeshGenerator.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/CSGGeometry.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/CSGCGALDomain3D.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/CSGCGALMeshGenerator3D.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/SurfaceReconstruction.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/CSGOperators.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/CSGGeometries3D.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/CSGPrimitive.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/CSGCGALDomain2D.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/DolfinMeshUtils.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/CSGCGALMeshGenerator2D.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/Meshes.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/CSGPrimitives2D.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/TetgenMeshGenerator3D.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr/GlobalInitializer.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include/mshr.h -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/mshr/mshrConfig.cmake -- Installing: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/mshr/mshr-config.cmake make[2]: Leaving directory '/<>/mshr-2018.1.0+dfsg1/obj-x86_64-linux-gnu' set -e; \ for v in python3.7; do \ cd python; \ CMAKE_PREFIX_PATH=/<>/mshr-2018.1.0+dfsg1/debian/tmp/usr $v setup.py build --build-base=/<>/mshr-2018.1.0+dfsg1/python/build-$v install --root=/<>/mshr-2018.1.0+dfsg1/debian/tmp --install-layout=deb; \ cd ..; \ done -- The C compiler identification is GNU 8.2.0 -- The CXX compiler identification is GNU 8.2.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found PythonInterp: /usr/bin/python3.7 (found version "3.7.2") -- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython3.7m.so -- Performing Test HAS_CPP14_FLAG -- Performing Test HAS_CPP14_FLAG - Success -- Found mshr: /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libmshr.so -- Configuring done -- Generating done -- Build files have been written to: /<>/mshr-2018.1.0+dfsg1/python/build running build running build_py creating /<>/mshr-2018.1.0+dfsg1/python/build-python3.7 creating /<>/mshr-2018.1.0+dfsg1/python/build-python3.7/lib.linux-x86_64-3.7 creating /<>/mshr-2018.1.0+dfsg1/python/build-python3.7/lib.linux-x86_64-3.7/mshr copying mshr/__init__.py -> /<>/mshr-2018.1.0+dfsg1/python/build-python3.7/lib.linux-x86_64-3.7/mshr running build_ext building 'mshr.cpp' extension creating /<>/mshr-2018.1.0+dfsg1/python/build-python3.7/temp.linux-x86_64-3.7 creating /<>/mshr-2018.1.0+dfsg1/python/build-python3.7/temp.linux-x86_64-3.7/src x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -fdebug-prefix-map=/<>/mshr-2018.1.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/include -I/<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/include -I/usr/include/python3.7m -c src/mshr.cpp -o /<>/mshr-2018.1.0+dfsg1/python/build-python3.7/temp.linux-x86_64-3.7/src/mshr.o -std=c++11 x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-Bsymbolic-functions -Wl,-z,relro -g -O2 -fdebug-prefix-map=/<>/mshr-2018.1.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 /<>/mshr-2018.1.0+dfsg1/python/build-python3.7/temp.linux-x86_64-3.7/src/mshr.o -L/<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu -lmshr -o /<>/mshr-2018.1.0+dfsg1/python/build-python3.7/lib.linux-x86_64-3.7/mshr/cpp.cpython-37m-x86_64-linux-gnu.so running install running install_lib creating /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/python3 creating /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/python3/dist-packages creating /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/python3/dist-packages/mshr copying /<>/mshr-2018.1.0+dfsg1/python/build-python3.7/lib.linux-x86_64-3.7/mshr/cpp.cpython-37m-x86_64-linux-gnu.so -> /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/python3/dist-packages/mshr copying /<>/mshr-2018.1.0+dfsg1/python/build-python3.7/lib.linux-x86_64-3.7/mshr/__init__.py -> /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/python3/dist-packages/mshr byte-compiling /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/python3/dist-packages/mshr/__init__.py to __init__.cpython-37.pyc running install_egg_info running egg_info creating mshr.egg-info writing mshr.egg-info/PKG-INFO writing dependency_links to mshr.egg-info/dependency_links.txt writing requirements to mshr.egg-info/requires.txt writing top-level names to mshr.egg-info/top_level.txt writing manifest file 'mshr.egg-info/SOURCES.txt' reading manifest file 'mshr.egg-info/SOURCES.txt' writing manifest file 'mshr.egg-info/SOURCES.txt' Copying mshr.egg-info to /<>/mshr-2018.1.0+dfsg1/debian/tmp/usr/lib/python3/dist-packages/mshr-2018.1.0.egg-info Skipping SOURCES.txt running install_scripts dh_numpy3 make[1]: Leaving directory '/<>/mshr-2018.1.0+dfsg1' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installexamples -O--buildsystem=cmake dh_installman -O--buildsystem=cmake dh_installcatalogs -O--buildsystem=cmake dh_installcron -O--buildsystem=cmake dh_installdebconf -O--buildsystem=cmake dh_installemacsen -O--buildsystem=cmake dh_installifupdown -O--buildsystem=cmake dh_installinfo -O--buildsystem=cmake dh_python3 -O--buildsystem=cmake dh_installinit -O--buildsystem=cmake dh_installsystemd -O--buildsystem=cmake dh_installmenu -O--buildsystem=cmake dh_installmime -O--buildsystem=cmake dh_installmodules -O--buildsystem=cmake dh_installlogcheck -O--buildsystem=cmake dh_installlogrotate -O--buildsystem=cmake dh_installpam -O--buildsystem=cmake dh_installppp -O--buildsystem=cmake dh_installudev -O--buildsystem=cmake dh_installgsettings -O--buildsystem=cmake dh_bugfiles -O--buildsystem=cmake dh_ucf -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_gconf -O--buildsystem=cmake dh_gconf: Please migrate to dh_installgsettings; gconf + dh_gconf is scheduled for removal. dh_icons -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_usrlocal -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_installwm -O--buildsystem=cmake dh_installxfonts -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake debian/rules override_dh_strip make[1]: Entering directory '/<>/mshr-2018.1.0+dfsg1' dh_strip --no-automatic-dbgsym make[1]: Leaving directory '/<>/mshr-2018.1.0+dfsg1' dh_makeshlibs -O--buildsystem=cmake dh_shlibdeps -O--buildsystem=cmake dpkg-shlibdeps: warning: symbol pthread_create used by debian/libmshr2018.1/usr/lib/x86_64-linux-gnu/libmshr.so.2018.1.0 found in none of the libraries dh_installdeb -O--buildsystem=cmake debian/rules override_dh_gencontrol make[1]: Entering directory '/<>/mshr-2018.1.0+dfsg1' dh_gencontrol -- -Vfenics:Upstream-Version=2018.1 \ -Vpybind11:Upstream-Version=2.2.4 -Vpybind11:Next-Upstream-Version=2.2.5 dpkg-gencontrol: warning: package libmshr-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package python3-mshr: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-mshr: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package libmshr2018.1: substitution variable ${python3:Depends} unused, but is defined make[1]: Leaving directory '/<>/mshr-2018.1.0+dfsg1' dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 pkgstriptranslations: processing python3-mshr (in debian/python3-mshr); do_strip: , oemstrip: pkgstriptranslations: processing libmshr2018.1 (in debian/libmshr2018.1); do_strip: , oemstrip: pkgstriptranslations: processing libmshr-dev (in debian/libmshr-dev); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python3-mshr/DEBIAN/control, package python3-mshr, directory debian/python3-mshr INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libmshr-dev/DEBIAN/control, package libmshr-dev, directory debian/libmshr-dev INFO: pkgstripfiles: waiting for lock (libmshr-dev) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (libmshr-dev) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (libmshr-dev) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (libmshr-dev) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (libmshr-dev) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (libmshr-dev) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (libmshr-dev) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (libmshr-dev) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (libmshr-dev) ... INFO: pkgstripfiles: waiting for lock (python3-mshr) ... INFO: pkgstripfiles: waiting for lock (libmshr-dev) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libmshr2018.1/DEBIAN/control, package libmshr2018.1, directory debian/libmshr2018.1 pkgstripfiles: Truncating usr/share/doc/libmshr2018.1/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package libmshr2018.1 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libmshr2018.1' in '../libmshr2018.1_2018.1.0+dfsg1-7build1_amd64.deb'. INFO: pkgstripfiles: waiting for lock (python3-mshr) ... Searching for duplicated docs in dependency libmshr2018.1... symlinking changelog.Debian.gz in libmshr-dev to file in libmshr2018.1 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libmshr-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libmshr-dev' in '../libmshr-dev_2018.1.0+dfsg1-7build1_amd64.deb'. Searching for duplicated docs in dependency libmshr-dev... symlinking changelog.Debian.gz in python3-mshr to file in libmshr2018.1 Searching for duplicated docs in dependency libmshr2018.1... pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-mshr ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-mshr' in '../python3-mshr_2018.1.0+dfsg1-7build1_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../mshr_2018.1.0+dfsg1-7build1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20181212-1811 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ mshr_2018.1.0+dfsg1-7build1_amd64.changes: ------------------------------------------ Format: 1.8 Date: Wed, 12 Dec 2018 12:51:14 +0100 Source: mshr Binary: libmshr2018.1 libmshr-dev python3-mshr Architecture: amd64 Version: 2018.1.0+dfsg1-7build1 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Gianfranco Costamagna Description: libmshr-dev - Shared links and header files for mshr libmshr2018.1 - Shared libraries for mshr python3-mshr - Python 3 interface for mshr Changes: mshr (2018.1.0+dfsg1-7build1) disco; urgency=medium . * Rebuild against new libhdf5-103. Checksums-Sha1: 683ba2a511281b52152a85004b9ddedcc161d488 59672 libmshr-dev_2018.1.0+dfsg1-7build1_amd64.deb 733b3add4af00ad8c27d27dd29ea9ea99cb199dc 1476568 libmshr2018.1_2018.1.0+dfsg1-7build1_amd64.deb 4abc28781b5782f4778fd11521a56b0a8da39725 13773 mshr_2018.1.0+dfsg1-7build1_amd64.buildinfo 82f98ed8695785263d706d9bc01dd17698fd5c72 86832 python3-mshr_2018.1.0+dfsg1-7build1_amd64.deb Checksums-Sha256: 713f8bafa5fc9efe7ca98f392b05c1f67dcb7d12a7bb20456a9e452d6923c1b5 59672 libmshr-dev_2018.1.0+dfsg1-7build1_amd64.deb f91d8569fec3afd7d02d3eba571a3b4e55ef7fa2924ead2f0a49c695b55d3c91 1476568 libmshr2018.1_2018.1.0+dfsg1-7build1_amd64.deb a6b3867bdce0685fb57896523d682841b7bb6d54f32a33be266458a977b3256e 13773 mshr_2018.1.0+dfsg1-7build1_amd64.buildinfo 8b1181be9162a3da4700dc7f9b97c18f3b7e6afde50c9a62d4fe26d43fc191e9 86832 python3-mshr_2018.1.0+dfsg1-7build1_amd64.deb Files: 6230e5486b96010ef11067418d625dec 59672 libdevel optional libmshr-dev_2018.1.0+dfsg1-7build1_amd64.deb 09f550c5d93371be2944861ce27a5ad3 1476568 libs optional libmshr2018.1_2018.1.0+dfsg1-7build1_amd64.deb 878eefae08efd76b8e1e7a5b0042e5c5 13773 math optional mshr_2018.1.0+dfsg1-7build1_amd64.buildinfo 480ff8533d1e50c9daa8388cf21052cb 86832 python optional python3-mshr_2018.1.0+dfsg1-7build1_amd64.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libmshr-dev_2018.1.0+dfsg1-7build1_amd64.deb -------------------------------------------- new debian package, version 2.0. size 59672 bytes: control archive=1572 bytes. 943 bytes, 17 lines control 1800 bytes, 26 lines md5sums Package: libmshr-dev Source: mshr Version: 2018.1.0+dfsg1-7build1 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Team Installed-Size: 287 Depends: libmshr2018.1 (= 2018.1.0+dfsg1-7build1), libdolfin-dev (>= 2018.1), python3-ffc (>= 2018.1), cmake (>= 2.8.0), libproj-dev, libboost-filesystem1.67.0, libboost-program-options1.67.0, libboost-system1.67.0, libc6 (>= 2.14), libdolfin2018.1, libgcc1 (>= 1:3.0), libopenmpi3, libstdc++6 (>= 5.2) Section: libdevel Priority: optional Homepage: http://fenicsproject.org Description: Shared links and header files for mshr mshr generates simplicial DOLFIN meshes in 2D and 3D from geometries described by Constructive Solid Geometry (CSG) or from surface files, utilizing CGAL and Tetgen as mesh generation backends. . This package contains the development files. drwxr-xr-x root/root 0 2018-12-12 11:51 ./ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/bin/ -rwxr-xr-x root/root 198704 2018-12-12 11:51 ./usr/bin/mshrable drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/include/ -rw-r--r-- root/root 376 2018-06-14 14:19 ./usr/include/mshr.h drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/include/mshr/ -rw-r--r-- root/root 1509 2018-06-14 14:19 ./usr/include/mshr/ASCFileReader.h -rw-r--r-- root/root 2896 2018-06-14 14:19 ./usr/include/mshr/CSGCGALDomain2D.h -rw-r--r-- root/root 7146 2018-06-14 14:19 ./usr/include/mshr/CSGCGALDomain3D.h -rw-r--r-- root/root 2604 2018-06-14 14:19 ./usr/include/mshr/CSGCGALMeshGenerator2D.h -rw-r--r-- root/root 2367 2018-06-14 14:19 ./usr/include/mshr/CSGCGALMeshGenerator3D.h -rw-r--r-- root/root 2112 2018-06-14 14:19 ./usr/include/mshr/CSGGeometries3D.h -rw-r--r-- root/root 3507 2018-06-14 14:19 ./usr/include/mshr/CSGGeometry.h -rw-r--r-- root/root 9915 2018-06-14 14:19 ./usr/include/mshr/CSGOperators.h -rw-r--r-- root/root 1074 2018-06-14 14:19 ./usr/include/mshr/CSGPrimitive.h -rw-r--r-- root/root 5415 2018-06-14 14:19 ./usr/include/mshr/CSGPrimitives2D.h -rw-r--r-- root/root 7845 2018-06-14 14:19 ./usr/include/mshr/CSGPrimitives3D.h -rw-r--r-- root/root 2296 2018-06-14 14:19 ./usr/include/mshr/DolfinMeshUtils.h -rw-r--r-- root/root 959 2018-06-14 14:19 ./usr/include/mshr/GlobalInitializer.h -rw-r--r-- root/root 1126 2018-06-14 14:19 ./usr/include/mshr/MeshGenerator.h -rw-r--r-- root/root 858 2018-06-14 14:19 ./usr/include/mshr/Meshes.h -rw-r--r-- root/root 1493 2018-06-14 14:19 ./usr/include/mshr/OFFFileReader.h -rw-r--r-- root/root 1502 2018-06-14 14:19 ./usr/include/mshr/STLFileReader.h -rw-r--r-- root/root 2475 2018-06-14 14:19 ./usr/include/mshr/SurfaceConsistency.h -rw-r--r-- root/root 1629 2018-06-14 14:19 ./usr/include/mshr/SurfaceReconstruction.h -rw-r--r-- root/root 1708 2018-06-14 14:19 ./usr/include/mshr/TetgenMeshGenerator3D.h drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/lib/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/lib/x86_64-linux-gnu/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/lib/x86_64-linux-gnu/cmake/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/lib/x86_64-linux-gnu/cmake/mshr/ -rw-r--r-- root/root 689 2018-12-12 11:51 ./usr/lib/x86_64-linux-gnu/cmake/mshr/mshr-config.cmake -rw-r--r-- root/root 633 2018-12-12 11:51 ./usr/lib/x86_64-linux-gnu/cmake/mshr/mshrConfig.cmake lrwxrwxrwx root/root 0 2018-12-12 11:51 ./usr/lib/x86_64-linux-gnu/libmshr.so -> libmshr.so.2018.1 drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/share/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/share/doc/libmshr-dev/ lrwxrwxrwx root/root 0 2018-12-12 11:51 ./usr/share/doc/libmshr-dev/changelog.Debian.gz -> ../libmshr2018.1/changelog.Debian.gz -rw-r--r-- root/root 716 2018-10-26 03:45 ./usr/share/doc/libmshr-dev/copyright drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/share/man/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/share/man/man1/ -rw-r--r-- root/root 820 2018-12-12 11:51 ./usr/share/man/man1/mshrable.1.gz libmshr2018.1_2018.1.0+dfsg1-7build1_amd64.deb ---------------------------------------------- new debian package, version 2.0. size 1476568 bytes: control archive=1036 bytes. 828 bytes, 18 lines control 306 bytes, 4 lines md5sums 29 bytes, 1 lines shlibs 74 bytes, 2 lines triggers Package: libmshr2018.1 Source: mshr Version: 2018.1.0+dfsg1-7build1 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Team Installed-Size: 6663 Depends: libboost-filesystem1.67.0, libboost-system1.67.0, libc6 (>= 2.14), libdolfin2018.1, libgcc1 (>= 1:3.0), libgmp10, libmpfr6 (>= 3.1.3), libopenmpi3, libstdc++6 (>= 6), libtet1.5 Section: libs Priority: optional Multi-Arch: same Homepage: http://fenicsproject.org Description: Shared libraries for mshr mshr generates simplicial DOLFIN meshes in 2D and 3D from geometries described by Constructive Solid Geometry (CSG) or from surface files, utilizing CGAL and Tetgen as mesh generation backends. . This package contains the shared libraries. drwxr-xr-x root/root 0 2018-12-12 11:51 ./ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/lib/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/lib/x86_64-linux-gnu/ lrwxrwxrwx root/root 0 2018-12-12 11:51 ./usr/lib/x86_64-linux-gnu/libmshr.so.2018.1 -> libmshr.so.2018.1.0 -rw-r--r-- root/root 6804680 2018-12-12 11:51 ./usr/lib/x86_64-linux-gnu/libmshr.so.2018.1.0 drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/share/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/share/doc/libmshr2018.1/ -rw-r--r-- root/root 2392 2018-06-14 14:19 ./usr/share/doc/libmshr2018.1/README.rst -rw-r--r-- root/root 1561 2018-12-12 11:51 ./usr/share/doc/libmshr2018.1/changelog.Debian.gz -rw-r--r-- root/root 716 2018-10-26 03:45 ./usr/share/doc/libmshr2018.1/copyright python3-mshr_2018.1.0+dfsg1-7build1_amd64.deb --------------------------------------------- new debian package, version 2.0. size 86832 bytes: control archive=1700 bytes. 1017 bytes, 18 lines control 1502 bytes, 17 lines md5sums 264 bytes, 12 lines * postinst #!/bin/sh 399 bytes, 12 lines * prerm #!/bin/sh Package: python3-mshr Source: mshr Version: 2018.1.0+dfsg1-7build1 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Science Team Installed-Size: 376 Depends: libmshr-dev (= 2018.1.0+dfsg1-7build1), libmshr2018.1 (= 2018.1.0+dfsg1-7build1), python3-dolfin (>= 2018.1), dolfin-bin (>= 2018.1), python3-pybind11 (>= 2.2.4), python3-pybind11 (<< 2.2.5), python3-numpy (>= 1:1.14.3), python3-numpy-abi9, python3 (<< 3.8), python3 (>= 3.7~), python3:any (>= 3.5~), libc6 (>= 2.14), libgcc1 (>= 1:3.0) Section: python Priority: optional Homepage: http://fenicsproject.org Description: Python 3 interface for mshr mshr generates simplicial DOLFIN meshes in 2D and 3D from geometries described by Constructive Solid Geometry (CSG) or from surface files, utilizing CGAL and Tetgen as mesh generation backends. . This package contains the Python 3 interface for mshr, and examples and demo programs. drwxr-xr-x root/root 0 2018-12-12 11:51 ./ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/lib/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/lib/python3/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/lib/python3/dist-packages/mshr-2018.1.0.egg-info/ -rw-r--r-- root/root 217 2018-12-12 11:51 ./usr/lib/python3/dist-packages/mshr-2018.1.0.egg-info/PKG-INFO -rw-r--r-- root/root 1 2018-12-12 11:51 ./usr/lib/python3/dist-packages/mshr-2018.1.0.egg-info/dependency_links.txt -rw-r--r-- root/root 0 2018-12-12 11:51 ./usr/lib/python3/dist-packages/mshr-2018.1.0.egg-info/requires.txt -rw-r--r-- root/root 5 2018-12-12 11:51 ./usr/lib/python3/dist-packages/mshr-2018.1.0.egg-info/top_level.txt drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/lib/python3/dist-packages/mshr/ -rw-r--r-- root/root 1535 2018-06-14 14:19 ./usr/lib/python3/dist-packages/mshr/__init__.py -rw-r--r-- root/root 343528 2018-12-12 11:51 ./usr/lib/python3/dist-packages/mshr/cpp.cpython-37m-x86_64-linux-gnu.so drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/share/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/share/doc/python3-mshr/ lrwxrwxrwx root/root 0 2018-12-12 11:51 ./usr/share/doc/python3-mshr/changelog.Debian.gz -> ../libmshr2018.1/changelog.Debian.gz -rw-r--r-- root/root 716 2018-10-26 03:45 ./usr/share/doc/python3-mshr/copyright drwxr-xr-x root/root 0 2018-12-12 11:51 ./usr/share/doc/python3-mshr/examples/ -rw-r--r-- root/root 1182 2018-06-14 14:19 ./usr/share/doc/python3-mshr/examples/classic.py -rw-r--r-- root/root 1532 2018-06-14 14:19 ./usr/share/doc/python3-mshr/examples/csg-subdomains-2D.py -rw-r--r-- root/root 1161 2018-06-14 14:19 ./usr/share/doc/python3-mshr/examples/deathstar.py -rw-r--r-- root/root 1013 2018-12-12 11:51 ./usr/share/doc/python3-mshr/examples/extrude.py -rw-r--r-- root/root 1423 2018-06-14 14:19 ./usr/share/doc/python3-mshr/examples/icecream.py -rw-r--r-- root/root 1361 2018-06-14 14:19 ./usr/share/doc/python3-mshr/examples/materials.py -rw-r--r-- root/root 2484 2018-06-14 14:19 ./usr/share/doc/python3-mshr/examples/propeller.py -rw-r--r-- root/root 592 2018-06-14 14:19 ./usr/share/doc/python3-mshr/examples/remove_degenerate.py -rw-r--r-- root/root 1521 2018-06-14 14:19 ./usr/share/doc/python3-mshr/examples/simple-csg-3D.py -rw-r--r-- root/root 644 2018-12-12 11:51 ./usr/share/doc/python3-mshr/examples/test.py +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 75696 Build-Time: 305 Distribution: disco-proposed Host Architecture: amd64 Install-Time: 108 Job: mshr_2018.1.0+dfsg1-7build1.dsc Machine Architecture: amd64 Package: mshr Package-Time: 415 Source-Version: 2018.1.0+dfsg1-7build1 Space: 75696 Status: successful Version: 2018.1.0+dfsg1-7build1 -------------------------------------------------------------------------------- Finished at 20181212-1811 Build needed 00:06:55, 75696k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15767726 Scanning for processes to kill in build PACKAGEBUILD-15767726