Ubuntu
murasaki package

murasaki 1.68.6-13build3 source package in Ubuntu

Changelog

murasaki (1.68.6-13build3) lunar; urgency=medium

  * Rebuild against latest icu

 -- Jeremy Bicha <email address hidden>  Sun, 05 Feb 2023 09:52:07 -0500

Upload details

Uploaded by:
Jeremy Bícha
Uploaded to:
Lunar
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Mantic release universe misc
Lunar release universe misc

Downloads

File Size SHA-256 Checksum
murasaki_1.68.6.orig-debian-tests-data.tar.gz 3.8 MiB bb3fee13bdf2ee9184667c9a3535dcd54525d9d98782e67c8c8713393cbb7862
murasaki_1.68.6.orig.tar.gz 300.5 KiB ebb3f3df2c0b3dc9f43977685f6c5e37ea483fb4189f7d965acc634bd10aaefe
murasaki_1.68.6-13build3.debian.tar.xz 11.1 KiB 8ec3f0f39d3b7dc48a29cc6e3750b93016665b9a0b2817dfb72ee095c63f463a
murasaki_1.68.6-13build3.dsc 2.7 KiB 7b283337a91eedd09bcd10e3ec5662d8607e542c1e7edc7edfbc53d2de8a1217

Available diffs

View changes file

Binary packages built by this source

murasaki: homology detection tool across multiple large genomes

 Murasaki is a scalable and fast, language theory-based homology
 detection tool across multiple large genomes. It enable whole-genome
 scale multiple genome global alignments. Supports unlimited length
 gapped-seed patterns and unique TF-IDF based filtering.
 .
 Murasaki is an anchor alignment software, which is
  * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
    40 nodes: 52 wall minutes))
  * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
    Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
  * unlimited pattern length
  * repeat tolerant
  * intelligent noise reduction

murasaki-common: homology detection tool across multiple large genomes (common files)

 Murasaki is a scalable and fast, language theory-based homology
 detection tool across multiple large genomes. It enable whole-genome
 scale multiple genome global alignments. Supports unlimited length
 gapped-seed patterns and unique TF-IDF based filtering.
 .
 Murasaki is an anchor alignment software, which is
  * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
    40 nodes: 52 wall minutes))
  * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
    Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
  * unlimited pattern length
  * repeat tolerant
  * intelligent noise reduction
 .
 This package contains all files that are common to the single core murasaki
 package and the multi core murasaki-mpi package.

murasaki-dbgsym: debug symbols for murasaki
murasaki-mpi: homology detection tool across multiple large genomes (MPI-version)

 Murasaki is a scalable and fast, language theory-based homology
 detection tool across multiple large genomes. It enable whole-genome
 scale multiple genome global alignments. Supports unlimited length
 gapped-seed patterns and unique TF-IDF based filtering.
 .
 Murasaki is an anchor alignment software, which is
  * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
    40 nodes: 52 wall minutes))
  * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
    Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
  * unlimited pattern length
  * repeat tolerant
  * intelligent noise reduction
 .
 This package provides the MPI-enabled binary for murasaki. While this
 will speed up operation on multi-processor machines it will slow down
 on a single processor.

murasaki-mpi-dbgsym: debug symbols for murasaki-mpi