https://launchpad.net/ubuntu/+source/octave-stk/2.6.1-3/+build/19765811 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-ppc64el-008 4.4.0-177-generic #207-Ubuntu SMP Mon Mar 16 01:16:18 UTC 2020 ppc64le Buildd toolchain package versions: launchpad-buildd_188 python-lpbuildd_188 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 3 Aug 17:13:27 ntpdate[1876]: adjust time server 10.211.37.1 offset 0.009643 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-19765811 --image-type chroot /home/buildd/filecache-default/fc8631117105b334ecbd8c05d268ae6e4d2edb33 Creating target for build PACKAGEBUILD-19765811 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-19765811 Starting target for build PACKAGEBUILD-19765811 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-19765811 'deb http://ftpmaster.internal/ubuntu groovy main universe' 'deb http://ftpmaster.internal/ubuntu groovy-security main universe' 'deb http://ftpmaster.internal/ubuntu groovy-updates main universe' 'deb http://ftpmaster.internal/ubuntu groovy-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-19765811 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-19765811 Updating target for build PACKAGEBUILD-19765811 Get:1 http://ftpmaster.internal/ubuntu groovy InRelease [267 kB] Get:2 http://ftpmaster.internal/ubuntu groovy-security InRelease [89.1 kB] Get:3 http://ftpmaster.internal/ubuntu groovy-updates InRelease [89.1 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed InRelease [118 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main ppc64el Packages [941 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main Translation-en [510 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/universe ppc64el Packages [8607 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/universe Translation-en [5251 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el Packages [126 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main Translation-en [64.4 kB] Get:11 http://ftpmaster.internal/ubuntu groovy-proposed/universe ppc64el Packages [382 kB] Get:12 http://ftpmaster.internal/ubuntu groovy-proposed/universe Translation-en [215 kB] Fetched 16.7 MB in 4s (4596 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libjson-c4 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: libjson-c5 The following packages will be upgraded: base-files bsdutils build-essential ca-certificates coreutils dpkg dpkg-dev libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcryptsetup12 libdpkg-perl liblzma5 libmount1 libmpc3 libmpfr6 libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsystemd0 libudev1 libuuid1 linux-libc-dev mount systemd systemd-sysv systemd-timesyncd util-linux xz-utils 32 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 18.4 MB of archives. After this operation, 1341 kB disk space will be freed. Get:1 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libc6-dev ppc64el 2.31-2ubuntu1 [2288 kB] Get:2 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libc-dev-bin ppc64el 2.31-2ubuntu1 [73.2 kB] Get:3 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el linux-libc-dev ppc64el 5.8.0-12.13 [1112 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libc6 ppc64el 2.31-2ubuntu1 [2707 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main ppc64el base-files ppc64el 11ubuntu10 [60.5 kB] Get:6 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el bsdutils ppc64el 1:2.36-2ubuntu1 [92.0 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main ppc64el libselinux1 ppc64el 3.1-2 [81.8 kB] Get:8 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el coreutils ppc64el 8.32-3ubuntu1 [1411 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el dpkg ppc64el 1.20.5ubuntu1 [1196 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el util-linux ppc64el 2.36-2ubuntu1 [1115 kB] Get:11 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libc-bin ppc64el 2.31-2ubuntu1 [632 kB] Get:12 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el systemd-timesyncd ppc64el 245.7-1ubuntu1 [28.6 kB] Get:13 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el systemd-sysv ppc64el 245.7-1ubuntu1 [10.3 kB] Get:14 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libjson-c5 ppc64el 0.15-1 [35.5 kB] Get:15 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libblkid1 ppc64el 2.36-2ubuntu1 [154 kB] Get:16 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libuuid1 ppc64el 2.36-2ubuntu1 [23.3 kB] Get:17 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libcryptsetup12 ppc64el 2:2.3.3-1ubuntu4 [227 kB] Get:18 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libmount1 ppc64el 2.36-2ubuntu1 [169 kB] Get:19 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el mount ppc64el 2.36-2ubuntu1 [127 kB] Get:20 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el systemd ppc64el 245.7-1ubuntu1 [4619 kB] Get:21 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libsystemd0 ppc64el 245.7-1ubuntu1 [301 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblzma5 ppc64el 5.2.4-1ubuntu1 [107 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsemanage-common all 3.1-1 [10.2 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsemanage1 ppc64el 3.1-1 [97.2 kB] Get:25 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libsmartcols1 ppc64el 2.36-2ubuntu1 [110 kB] Get:26 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libudev1 ppc64el 245.7-1ubuntu1 [80.5 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main ppc64el ca-certificates all 20200601 [147 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main ppc64el xz-utils ppc64el 5.2.4-1ubuntu1 [86.2 kB] Get:29 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el dpkg-dev all 1.20.5ubuntu1 [758 kB] Get:30 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libdpkg-perl all 1.20.5ubuntu1 [231 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main ppc64el build-essential ppc64el 12.8ubuntu3 [4640 B] Get:32 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libmpfr6 ppc64el 4.1.0-3 [300 kB] Get:33 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libmpc3 ppc64el 1.2.0~rc1-1 [47.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.4 MB in 1s (26.8 MB/s) (Reading database ... 12727 files and directories currently installed.) 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Preparing to unpack .../2-dpkg-dev_1.20.5ubuntu1_all.deb ... Unpacking dpkg-dev (1.20.5ubuntu1) over (1.19.7ubuntu4) ... Preparing to unpack .../3-libdpkg-perl_1.20.5ubuntu1_all.deb ... Unpacking libdpkg-perl (1.20.5ubuntu1) over (1.19.7ubuntu4) ... Preparing to unpack .../4-build-essential_12.8ubuntu3_ppc64el.deb ... Unpacking build-essential (12.8ubuntu3) over (12.8ubuntu1) ... Preparing to unpack .../5-libmpfr6_4.1.0-3_ppc64el.deb ... Unpacking libmpfr6:ppc64el (4.1.0-3) over (4.0.2-1build1) ... Preparing to unpack .../6-libmpc3_1.2.0~rc1-1_ppc64el.deb ... Unpacking libmpc3:ppc64el (1.2.0~rc1-1) over (1.1.0-1) ... Setting up linux-libc-dev:ppc64el (5.8.0-12.13) ... Setting up ca-certificates (20200601) ... Updating certificates in /etc/ssl/certs... 13 added, 14 removed; done. Setting up libmpfr6:ppc64el (4.1.0-3) ... Setting up xz-utils (5.2.4-1ubuntu1) ... Setting up libmpc3:ppc64el (1.2.0~rc1-1) ... Setting up libdpkg-perl (1.20.5ubuntu1) ... Setting up mount (2.36-2ubuntu1) ... Setting up libc-dev-bin (2.31-2ubuntu1) ... Setting up libjson-c5:ppc64el (0.15-1) ... Setting up dpkg-dev (1.20.5ubuntu1) ... Setting up libc6-dev:ppc64el (2.31-2ubuntu1) ... Setting up libcryptsetup12:ppc64el (2:2.3.3-1ubuntu4) ... Setting up build-essential (12.8ubuntu3) ... Setting up systemd-timesyncd (245.7-1ubuntu1) ... Setting up systemd (245.7-1ubuntu1) ... Initializing machine ID from random generator. Setting up systemd-sysv (245.7-1ubuntu1) ... Processing triggers for libc-bin (2.31-2ubuntu1) ... Processing triggers for ca-certificates (20200601) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-19765811 ppc64el groovy-proposed -c chroot:build-PACKAGEBUILD-19765811 --arch=ppc64el --dist=groovy-proposed --nolog octave-stk_2.6.1-3.dsc Initiating build PACKAGEBUILD-19765811 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-177-generic #207-Ubuntu SMP Mon Mar 16 01:16:18 UTC 2020 ppc64le sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-ppc64el-008.buildd +==============================================================================+ | octave-stk 2.6.1-3 (ppc64el) 03 Aug 2020 17:13 | +==============================================================================+ Package: octave-stk Version: 2.6.1-3 Source Version: 2.6.1-3 Distribution: groovy-proposed Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el I: NOTICE: Log filtering will replace 'build/octave-stk-LCSTrA/octave-stk-2.6.1' with '<>' I: NOTICE: Log filtering will replace 'build/octave-stk-LCSTrA' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-19765811/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- octave-stk_2.6.1-3.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-YfScCL/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-YfScCL/apt_archive ./ InRelease Get:2 copy:/<>/resolver-YfScCL/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-YfScCL/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-YfScCL/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-YfScCL/apt_archive ./ Packages [528 B] Fetched 2861 B in 0s (161 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libjson-c4 Use 'apt autoremove' to remove it. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-YfScCL/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12835 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper-compat (= 13), dh-octave (>= 0.7.1) Filtered Build-Depends: debhelper-compat (= 13), dh-octave (>= 0.7.1) dpkg-deb: building package 'sbuild-build-depends-octave-stk-dummy' in '/<>/resolver-58XVES/apt_archive/sbuild-build-depends-octave-stk-dummy.deb'. Ign:1 copy:/<>/resolver-58XVES/apt_archive ./ InRelease Get:2 copy:/<>/resolver-58XVES/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-58XVES/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-58XVES/apt_archive ./ Sources [231 B] Get:5 copy:/<>/resolver-58XVES/apt_archive ./ Packages [549 B] Fetched 2899 B in 0s (152 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install octave-stk build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libjson-c4 Use 'apt autoremove' to remove it. The following additional packages will be installed: aglfn autoconf automake autopoint autotools-dev bsdextrautils cme debhelper dh-autoreconf dh-octave dh-octave-autopkgtest dh-strip-nondeterminism diffstat dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-freefont-otf gettext gettext-base gfortran gfortran-10 gnuplot-data gnuplot-nox groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libalgorithm-c3-perl libaliased-perl libamd2 libapp-cmd-perl libapt-pkg-perl libarchive-zip-perl libarpack2 libarray-intspan-perl libasn1-8-heimdal libasound2 libasound2-data libavahi-client3 libavahi-common-data libavahi-common3 libb-hooks-endofscope-perl libb-hooks-op-check-perl libblas-dev libblas3 libboolean-perl libbrotli1 libbsd0 libcairo2 libcamd2 libcapture-tiny-perl libcarp-assert-more-perl libcarp-assert-perl libccolamd2 libcholmod3 libclass-c3-perl libclass-data-inheritable-perl libclass-load-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-choose-perl libclone-perl libcolamd2 libconfig-model-backend-yaml-perl libconfig-model-dpkg-perl libconfig-model-perl libconfig-tiny-perl libconvert-binhex-perl libcpanel-json-xs-perl libcroco3 libcups2 libcurl3-gnutls libcxsparse3 libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-section-perl libdata-validate-domain-perl libdatrie1 libdbus-1-3 libdebhelper-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2 libegl-dev libegl-mesa0 libegl1 libelf1 libemail-address-xs-perl libencode-locale-perl liberror-perl libevdev2 libexception-class-perl libexpat1 libexporter-lite-perl libexporter-tiny-perl libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-single3 libfile-basedir-perl libfile-find-rule-perl libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl libfile-which-perl libflac8 libfltk-gl1.3 libfltk1.3 libfont-ttf-perl libfontconfig1 libfreetype6 libfribidi0 libfuture-perl libgbm1 libgd3 libgetopt-long-descriptive-perl libgfortran-10-dev libgfortran5 libgl-dev libgl1 libgl1-mesa-dev libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libgles-dev libgles1 libgles2 libglib2.0-0 libglpk40 libglu1-mesa libglvnd-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libgraphicsmagick++-q16-12 libgraphicsmagick-q16-3 libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libgudev-1.0-0 libharfbuzz0b libhash-fieldhash-perl libhash-merge-perl libhcrypto4-heimdal libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libheimbase1-heimdal libheimntlm0-heimdal libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhx509-5-heimdal libice6 libicu67 libimport-into-perl libinput-bin libinput10 libio-async-loop-epoll-perl libio-async-perl libio-html-perl libio-socket-ssl-perl libio-string-perl libio-stringy-perl libio-tiecombine-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjack-jackd2-0 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjson-maybexs-perl libjson-perl libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2 libldap-common liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-someutils-perl liblist-utilsby-perl libllvm10 liblog-any-adapter-screen-perl liblog-any-perl liblog-log4perl-perl libltdl7 liblua5.3-0 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1 libmailtools-perl libmd4c0 libmetis5 libmetrics-any-perl libmime-tools-perl libmodule-implementation-perl libmodule-pluggable-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl libmouse-perl libmousex-nativetraits-perl libmousex-strictconstructor-perl libmro-compat-perl libmtdev1 libnamespace-autoclean-perl libnamespace-clean-perl libncurses-dev libnet-domain-tld-perl libnet-http-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnghttp2-14 libnumber-compare-perl libnumber-range-perl libobject-id-perl liboctave-dev liboctave7 libogg0 libopengl-dev libopengl0 libpackage-stash-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libparams-classify-perl libparams-util-perl libparams-validate-perl libparse-debcontrol-perl libparse-recdescent-perl libpath-iterator-rule-perl libpath-tiny-perl libpcre2-16-0 libperlio-gzip-perl libpipeline1 libpixman-1-0 libpod-constants-perl libpod-pom-perl libportaudio2 libpsl5 libpthread-stubs0-dev libqhull8.0 libqrupdate1 libqscintilla2-qt5-15 libqscintilla2-qt5-l10n libqt5core5a libqt5dbus5 libqt5gui5 libqt5help5 libqt5network5 libqt5printsupport5 libqt5sql5 libqt5widgets5 libqt5xml5 libre-engine-re2-perl libre2-8 libreadline-dev libregexp-common-perl libregexp-pattern-license-perl libregexp-pattern-perl libroken18-heimdal librole-tiny-perl librtmp1 libsamplerate0 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsereal-decoder-perl libsereal-encoder-perl libsigsegv2 libsm6 libsndfile1 libsoftware-license-perl libsoftware-licensemoreutils-perl libsort-key-perl libsort-versions-perl libssh-4 libstrictures-perl libstring-copyright-perl libstring-escape-perl libstring-rewriteprefix-perl libstruct-dumb-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-override-perl libsub-quote-perl libsub-uplevel-perl libsuitesparseconfig5 libsz2 libtest-exception-perl libtest-metrics-any-perl libtext-autoformat-perl libtext-glob-perl libtext-levenshtein-damerau-perl libtext-levenshteinxs-perl libtext-reform-perl libtext-template-perl libtext-unidecode-perl libtext-xslate-perl libthai-data libthai0 libtiff5 libtime-duration-perl libtime-moment-perl libtimedate-perl libtool libtry-tiny-perl libtype-tiny-perl libuchardet0 libumfpack5 libunicode-utf8-perl liburi-perl libvariable-magic-perl libvorbis0a libvorbisenc2 libwacom-common libwacom2 libwayland-client0 libwayland-server0 libwebp6 libwebpmux3 libwind0-heimdal libwmf0.2-7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxext6 libxfixes3 libxft2 libxinerama1 libxkbcommon-x11-0 libxkbcommon0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-writer-perl libxml2 libxpm4 libxrender1 libxshmfence1 libxxf86vm1 libyaml-0-2 libyaml-libyaml-perl libyaml-perl libyaml-tiny-perl licensecheck lintian lzip m4 man-db netbase octave octave-common patchutils perl-openssl-defaults po-debconf shared-mime-info t1utils tex-common texinfo ucf x11-common x11proto-core-dev x11proto-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc libconfig-model-cursesui-perl libconfig-model-itself-perl dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc gfortran-10-doc libcoarrays-dev gnuplot-doc groff libasound2-plugins alsa-utils liblapack-doc libconfig-model-openssh-perl libterm-readline-perl-perl | libterm-readline-gnu-perl cups-common libfftw3-doc libxml-parser-perl libgd-tools libiodbc2-dev default-libmysqlclient-dev graphicsmagick-dbg krb5-doc krb5-user libhdf5-doc libdata-dump-perl jackd2 liblcms2-utils libdbd-csv-perl liblog-dispatch-filerotate-perl librrds-perl libxml-dom-perl libcrypt-ssleay-perl ncurses-doc libossp-uuid-perl libscalar-number-perl libqscintilla2-doc qt5-image-formats-plugins qtwayland5 readline-doc lm-sensors libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libtool-doc gcj-jdk libdevel-lexalias-perl libwmf0.2-7-gtk libauthen-ntlm-perl libx11-doc libxcb-doc libyaml-shell-perl bash-completion binutils-multiarch m4-doc apparmor less www-browser libmail-box-perl texlive-base texlive-latex-base texlive-plain-generic texlive-fonts-recommended Recommended packages: libconfig-model-approx-perl libconfig-model-lcdproc-perl libconfig-model-openssh-perl libconfig-model-systemd-perl libconfig-model-tkui-perl curl | wget | lynx fonts-liberation groff alsa-ucm-conf alsa-topology-conf libclass-c3-xs-perl bash-completion fuse libfuse-perl dbus libarchive-cpio-perl libglib2.0-data xdg-user-dirs ghostscript gsfonts libhtml-format-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libjson-xs-perl krb5-locales liblist-someutils-xs-perl libipc-shareable-perl liblog-dispatch-perl libauthen-sasl-perl libpackage-stash-xs-perl libtie-ixhash-perl publicsuffix qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme libqt5sql5-sqlite | libqt5sql5-mysql | libqt5sql5-odbc | libqt5sql5-psql | libqt5sql5-tds | libqt5sql5-ibase libsasl2-modules libltdl-dev libref-util-perl libtype-tiny-xs-perl libwacom-bin fonts-urw-base35 libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libxml-sax-expat-perl libopenblas0 | libatlas3-base pstoedit epstool default-jre-headless octave-doc libmail-sendmail-perl The following NEW packages will be installed: aglfn autoconf automake autopoint autotools-dev bsdextrautils cme debhelper dh-autoreconf dh-octave dh-octave-autopkgtest dh-strip-nondeterminism diffstat dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-freefont-otf gettext gettext-base gfortran gfortran-10 gnuplot-data gnuplot-nox groff-base hdf5-helpers intltool-debian libaec-dev libaec0 libalgorithm-c3-perl libaliased-perl libamd2 libapp-cmd-perl libapt-pkg-perl libarchive-zip-perl libarpack2 libarray-intspan-perl libasn1-8-heimdal libasound2 libasound2-data libavahi-client3 libavahi-common-data libavahi-common3 libb-hooks-endofscope-perl libb-hooks-op-check-perl libblas-dev libblas3 libboolean-perl libbrotli1 libbsd0 libcairo2 libcamd2 libcapture-tiny-perl libcarp-assert-more-perl libcarp-assert-perl libccolamd2 libcholmod3 libclass-c3-perl libclass-data-inheritable-perl libclass-load-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-choose-perl libclone-perl libcolamd2 libconfig-model-backend-yaml-perl libconfig-model-dpkg-perl libconfig-model-perl libconfig-tiny-perl libconvert-binhex-perl libcpanel-json-xs-perl libcroco3 libcups2 libcurl3-gnutls libcxsparse3 libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-section-perl libdata-validate-domain-perl libdatrie1 libdbus-1-3 libdebhelper-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2 libegl-dev libegl-mesa0 libegl1 libelf1 libemail-address-xs-perl libencode-locale-perl liberror-perl libevdev2 libexception-class-perl libexpat1 libexporter-lite-perl libexporter-tiny-perl libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-single3 libfile-basedir-perl libfile-find-rule-perl libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl libfile-which-perl libflac8 libfltk-gl1.3 libfltk1.3 libfont-ttf-perl libfontconfig1 libfreetype6 libfribidi0 libfuture-perl libgbm1 libgd3 libgetopt-long-descriptive-perl libgfortran-10-dev libgfortran5 libgl-dev libgl1 libgl1-mesa-dev libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libgles-dev libgles1 libgles2 libglib2.0-0 libglpk40 libglu1-mesa libglvnd-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libgraphicsmagick++-q16-12 libgraphicsmagick-q16-3 libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libgudev-1.0-0 libharfbuzz0b libhash-fieldhash-perl libhash-merge-perl libhcrypto4-heimdal libhdf5-103-1 libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100 libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libheimbase1-heimdal libheimntlm0-heimdal libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhx509-5-heimdal libice6 libicu67 libimport-into-perl libinput-bin libinput10 libio-async-loop-epoll-perl libio-async-perl libio-html-perl libio-socket-ssl-perl libio-string-perl libio-stringy-perl libio-tiecombine-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjack-jackd2-0 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjson-maybexs-perl libjson-perl libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libldap-2.4-2 libldap-common liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-someutils-perl liblist-utilsby-perl libllvm10 liblog-any-adapter-screen-perl liblog-any-perl liblog-log4perl-perl libltdl7 liblua5.3-0 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1 libmailtools-perl libmd4c0 libmetis5 libmetrics-any-perl libmime-tools-perl libmodule-implementation-perl libmodule-pluggable-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl libmouse-perl libmousex-nativetraits-perl libmousex-strictconstructor-perl libmro-compat-perl libmtdev1 libnamespace-autoclean-perl libnamespace-clean-perl libncurses-dev libnet-domain-tld-perl libnet-http-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnghttp2-14 libnumber-compare-perl libnumber-range-perl libobject-id-perl liboctave-dev liboctave7 libogg0 libopengl-dev libopengl0 libpackage-stash-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libparams-classify-perl libparams-util-perl libparams-validate-perl libparse-debcontrol-perl libparse-recdescent-perl libpath-iterator-rule-perl libpath-tiny-perl libpcre2-16-0 libperlio-gzip-perl libpipeline1 libpixman-1-0 libpod-constants-perl libpod-pom-perl libportaudio2 libpsl5 libpthread-stubs0-dev libqhull8.0 libqrupdate1 libqscintilla2-qt5-15 libqscintilla2-qt5-l10n libqt5core5a libqt5dbus5 libqt5gui5 libqt5help5 libqt5network5 libqt5printsupport5 libqt5sql5 libqt5widgets5 libqt5xml5 libre-engine-re2-perl libre2-8 libreadline-dev libregexp-common-perl libregexp-pattern-license-perl libregexp-pattern-perl libroken18-heimdal librole-tiny-perl librtmp1 libsamplerate0 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsereal-decoder-perl libsereal-encoder-perl libsigsegv2 libsm6 libsndfile1 libsoftware-license-perl libsoftware-licensemoreutils-perl libsort-key-perl libsort-versions-perl libssh-4 libstrictures-perl libstring-copyright-perl libstring-escape-perl libstring-rewriteprefix-perl libstruct-dumb-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-override-perl libsub-quote-perl libsub-uplevel-perl libsuitesparseconfig5 libsz2 libtest-exception-perl libtest-metrics-any-perl libtext-autoformat-perl libtext-glob-perl libtext-levenshtein-damerau-perl libtext-levenshteinxs-perl libtext-reform-perl libtext-template-perl libtext-unidecode-perl libtext-xslate-perl libthai-data libthai0 libtiff5 libtime-duration-perl libtime-moment-perl libtimedate-perl libtool libtry-tiny-perl libtype-tiny-perl libuchardet0 libumfpack5 libunicode-utf8-perl liburi-perl libvariable-magic-perl libvorbis0a libvorbisenc2 libwacom-common libwacom2 libwayland-client0 libwayland-server0 libwebp6 libwebpmux3 libwind0-heimdal libwmf0.2-7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxext6 libxfixes3 libxft2 libxinerama1 libxkbcommon-x11-0 libxkbcommon0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-writer-perl libxml2 libxpm4 libxrender1 libxshmfence1 libxxf86vm1 libyaml-0-2 libyaml-libyaml-perl libyaml-perl libyaml-tiny-perl licensecheck lintian lzip m4 man-db netbase octave octave-common patchutils perl-openssl-defaults po-debconf sbuild-build-depends-octave-stk-dummy shared-mime-info t1utils tex-common texinfo ucf x11-common x11proto-core-dev x11proto-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 439 newly installed, 0 to remove and 0 not upgraded. Need to get 126 MB of archives. After this operation, 584 MB of additional disk space will be used. Get:1 copy:/<>/resolver-58XVES/apt_archive ./ sbuild-build-depends-octave-stk-dummy 0.invalid.0 [876 B] Get:2 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el bsdextrautils ppc64el 2.36-2ubuntu1 [83.6 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main ppc64el libuchardet0 ppc64el 0.0.7-1 [71.0 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main ppc64el groff-base ppc64el 1.22.4-5 [922 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpipeline1 ppc64el 1.5.2-2build1 [28.9 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main ppc64el man-db ppc64el 2.9.3-2 [1148 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main ppc64el ucf all 3.0043 [56.1 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/universe ppc64el tex-common all 6.15 [33.0 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmagic-mgc ppc64el 1:5.38-5 [218 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmagic1 ppc64el 1:5.38-5 [93.2 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main ppc64el file ppc64el 1:5.38-5 [24.2 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main ppc64el libbsd0 ppc64el 0.10.0-1 [55.1 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdbus-1-3 ppc64el 1.12.18-1ubuntu1 [199 kB] Get:14 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libelf1 ppc64el 0.180-1 [52.1 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main ppc64el libexpat1 ppc64el 2.2.9-1build1 [77.6 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfribidi0 ppc64el 1.0.8-2 [24.9 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main ppc64el libglib2.0-0 ppc64el 2.64.4-1 [1382 kB] Get:18 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libicu67 ppc64el 67.1-3ubuntu1 [8711 kB] Get:19 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libxml2 ppc64el 2.9.10+dfsg-5build1 [656 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main ppc64el libyaml-0-2 ppc64el 0.2.2-1 [55.8 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main ppc64el netbase all 6.1 [13.1 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main ppc64el shared-mime-info ppc64el 1.15-1 [436 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main ppc64el xkb-data all 2.29-2 [349 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main ppc64el gettext-base ppc64el 0.19.8.1-10build1 [52.5 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdrm-common all 2.4.102-1 [5524 B] Get:26 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdrm2 ppc64el 2.4.102-1 [38.8 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main ppc64el libedit2 ppc64el 3.1-20191231-1 [107 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main ppc64el libkrb5support0 ppc64el 1.17-10 [34.7 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main ppc64el libk5crypto3 ppc64el 1.17-10 [102 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main ppc64el libkeyutils1 ppc64el 1.6.1-2ubuntu1 [11.3 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main ppc64el libkrb5-3 ppc64el 1.17-10 [371 kB] Get:32 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgssapi-krb5-2 ppc64el 1.17-10 [135 kB] Get:33 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpsl5 ppc64el 0.21.0-1.1 [53.3 kB] Get:34 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxau6 ppc64el 1:1.0.9-0ubuntu1 [7876 B] Get:35 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxdmcp6 ppc64el 1:1.1.3-0ubuntu1 [11.8 kB] Get:36 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb1 ppc64el 1.14-2 [50.2 kB] Get:37 http://ftpmaster.internal/ubuntu groovy/main ppc64el libx11-data all 2:1.6.9-2ubuntu1 [113 kB] Get:38 http://ftpmaster.internal/ubuntu groovy/main ppc64el libx11-6 ppc64el 2:1.6.9-2ubuntu1 [631 kB] Get:39 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxext6 ppc64el 2:1.3.4-0ubuntu1 [35.1 kB] Get:40 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsigsegv2 ppc64el 2.12-2build1 [14.4 kB] Get:41 http://ftpmaster.internal/ubuntu groovy/main ppc64el m4 ppc64el 1.4.18-4 [210 kB] Get:42 http://ftpmaster.internal/ubuntu groovy/main ppc64el autoconf all 2.69-11.1 [321 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main ppc64el autotools-dev all 20180224.1 [39.6 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main ppc64el automake all 1:1.16.2-3ubuntu1 [548 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main ppc64el autopoint all 0.19.8.1-10build1 [412 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcapture-tiny-perl all 0.48-1 [20.4 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/main ppc64el libparams-util-perl ppc64el 1.07-3build5 [19.6 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsub-install-perl all 0.928-1 [10.5 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdata-optlist-perl all 0.110-1 [9956 B] Get:50 http://ftpmaster.internal/ubuntu groovy/main ppc64el libb-hooks-op-check-perl ppc64el 0.22-1build2 [10.5 kB] Get:51 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdynaloader-functions-perl all 0.003-1 [11.9 kB] Get:52 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdevel-callchecker-perl ppc64el 0.008-1ubuntu1 [14.6 kB] Get:53 http://ftpmaster.internal/ubuntu groovy/main ppc64el libparams-classify-perl ppc64el 0.015-1build2 [23.3 kB] Get:54 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmodule-runtime-perl all 0.016-1 [16.2 kB] Get:55 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtry-tiny-perl all 0.30-1 [20.5 kB] Get:56 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmodule-implementation-perl all 0.09-1 [12.2 kB] Get:57 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpackage-stash-perl all 0.38-1 [19.1 kB] Get:58 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libclass-load-perl all 0.25-1 [13.5 kB] Get:59 http://ftpmaster.internal/ubuntu groovy/main ppc64el libio-stringy-perl all 2.111-3 [55.8 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/main ppc64el libparams-validate-perl ppc64el 1.29-3 [52.8 kB] Get:61 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsub-exporter-perl all 0.987-1 [44.9 kB] Get:62 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgetopt-long-descriptive-perl all 0.105-1 [24.7 kB] Get:63 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libio-tiecombine-perl all 1.005-1 [12.5 kB] Get:64 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libmodule-pluggable-perl all 5.2-1 [21.9 kB] Get:65 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libstring-rewriteprefix-perl all 0.008-1 [6516 B] Get:66 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libapp-cmd-perl all 0.331-1 [58.6 kB] Get:67 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libboolean-perl all 0.46-1 [8654 B] Get:68 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libcarp-assert-perl all 0.21-1 [16.6 kB] Get:69 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libsub-uplevel-perl all 0.2800-1 [13.5 kB] Get:70 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libtest-exception-perl all 0.43-1 [14.7 kB] Get:71 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libcarp-assert-more-perl all 1.20-1 [15.0 kB] Get:72 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfile-which-perl all 1.23-1 [13.8 kB] Get:73 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfile-homedir-perl all 1.004-1 [37.3 kB] Get:74 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libclone-choose-perl all 0.010-1 [7672 B] Get:75 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libhash-merge-perl all 0.301-1 [13.1 kB] Get:76 http://ftpmaster.internal/ubuntu groovy/main ppc64el libjson-perl all 4.02000-2 [80.9 kB] Get:77 http://ftpmaster.internal/ubuntu groovy/main ppc64el libexporter-tiny-perl all 1.002002-1 [36.2 kB] Get:78 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblist-moreutils-perl ppc64el 0.416-1build5 [55.8 kB] Get:79 http://ftpmaster.internal/ubuntu groovy/universe ppc64el liblog-log4perl-perl all 1.50-1 [344 kB] Get:80 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmouse-perl ppc64el 2.5.10-1build1 [158 kB] Get:81 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libmousex-nativetraits-perl all 1.09-2 [66.7 kB] Get:82 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libmousex-strictconstructor-perl all 0.02-2 [4812 B] Get:83 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libparse-recdescent-perl all 1.967015+dfsg-2 [145 kB] Get:84 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpath-tiny-perl all 0.114-1 [42.6 kB] Get:85 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libpod-pom-perl all 2.01-3 [62.6 kB] Get:86 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libregexp-common-perl all 2017060201-1 [168 kB] Get:87 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libconfig-model-perl all 2.140-1 [400 kB] Get:88 http://ftpmaster.internal/ubuntu groovy/main ppc64el libyaml-perl all 1.30-1 [58.2 kB] Get:89 http://ftpmaster.internal/ubuntu groovy/universe ppc64el cme all 1.032-1 [76.8 kB] Get:90 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtool all 2.4.6-14 [161 kB] Get:91 http://ftpmaster.internal/ubuntu groovy/main ppc64el dh-autoreconf all 19 [16.1 kB] Get:92 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdebhelper-perl all 13.2ubuntu1 [64.2 kB] Get:93 http://ftpmaster.internal/ubuntu groovy/main ppc64el libarchive-zip-perl all 1.68-1 [90.2 kB] Get:94 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsub-override-perl all 0.09-2 [9532 B] Get:95 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:96 http://ftpmaster.internal/ubuntu groovy/main ppc64el dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:97 http://ftpmaster.internal/ubuntu groovy/main ppc64el dwz ppc64el 0.13-5 [136 kB] Get:98 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcroco3 ppc64el 0.6.13-1 [92.1 kB] Get:99 http://ftpmaster.internal/ubuntu groovy/main ppc64el gettext ppc64el 0.19.8.1-10build1 [959 kB] Get:100 http://ftpmaster.internal/ubuntu groovy/main ppc64el intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:101 http://ftpmaster.internal/ubuntu groovy/main ppc64el po-debconf all 1.0.21 [233 kB] Get:102 http://ftpmaster.internal/ubuntu groovy/main ppc64el debhelper all 13.2ubuntu1 [878 kB] Get:103 http://ftpmaster.internal/ubuntu groovy/main ppc64el libblas3 ppc64el 3.9.0-2 [211 kB] Get:104 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgfortran5 ppc64el 10.2.0-3ubuntu1 [433 kB] Get:105 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblapack3 ppc64el 3.9.0-2 [2115 kB] Get:106 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libarpack2 ppc64el 3.7.0-3 [88.7 kB] Get:107 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libsuitesparseconfig5 ppc64el 1:5.8.1+dfsg-2 [10.2 kB] Get:108 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libamd2 ppc64el 1:5.8.1+dfsg-2 [24.3 kB] Get:109 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libcamd2 ppc64el 1:5.8.1+dfsg-2 [26.6 kB] Get:110 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libccolamd2 ppc64el 1:5.8.1+dfsg-2 [27.0 kB] Get:111 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libcolamd2 ppc64el 1:5.8.1+dfsg-2 [19.2 kB] Get:112 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmetis5 ppc64el 5.1.0.dfsg-7 [171 kB] Get:113 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libcholmod3 ppc64el 1:5.8.1+dfsg-2 [380 kB] Get:114 http://ftpmaster.internal/ubuntu groovy/main ppc64el libbrotli1 ppc64el 1.0.7-7 [291 kB] Get:115 http://ftpmaster.internal/ubuntu groovy/main ppc64el libroken18-heimdal ppc64el 7.7.0+dfsg-2 [46.4 kB] Get:116 http://ftpmaster.internal/ubuntu groovy/main ppc64el libasn1-8-heimdal ppc64el 7.7.0+dfsg-2 [176 kB] Get:117 http://ftpmaster.internal/ubuntu groovy/main ppc64el libheimbase1-heimdal ppc64el 7.7.0+dfsg-2 [32.4 kB] Get:118 http://ftpmaster.internal/ubuntu groovy/main ppc64el libhcrypto4-heimdal ppc64el 7.7.0+dfsg-2 [108 kB] Get:119 http://ftpmaster.internal/ubuntu groovy/main ppc64el libwind0-heimdal ppc64el 7.7.0+dfsg-2 [48.9 kB] Get:120 http://ftpmaster.internal/ubuntu groovy/main ppc64el libhx509-5-heimdal ppc64el 7.7.0+dfsg-2 [120 kB] Get:121 http://ftpmaster.internal/ubuntu groovy/main ppc64el libkrb5-26-heimdal ppc64el 7.7.0+dfsg-2 [234 kB] Get:122 http://ftpmaster.internal/ubuntu groovy/main ppc64el libheimntlm0-heimdal ppc64el 7.7.0+dfsg-2 [17.4 kB] Get:123 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgssapi3-heimdal ppc64el 7.7.0+dfsg-2 [105 kB] Get:124 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsasl2-modules-db ppc64el 2.1.27+dfsg-2 [16.9 kB] Get:125 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsasl2-2 ppc64el 2.1.27+dfsg-2 [60.2 kB] Get:126 http://ftpmaster.internal/ubuntu groovy/main ppc64el libldap-common all 2.4.50+dfsg-1ubuntu3 [16.9 kB] Get:127 http://ftpmaster.internal/ubuntu groovy/main ppc64el libldap-2.4-2 ppc64el 2.4.50+dfsg-1ubuntu3 [176 kB] Get:128 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnghttp2-14 ppc64el 1.41.0-2 [78.8 kB] Get:129 http://ftpmaster.internal/ubuntu groovy/main ppc64el librtmp1 ppc64el 2.4+20151223.gitfa8646d.1-2build2 [59.2 kB] Get:130 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libssh-4 ppc64el 0.9.4-1ubuntu2 [195 kB] Get:131 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcurl3-gnutls ppc64el 7.68.0-1ubuntu4 [254 kB] Get:132 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libcxsparse3 ppc64el 1:5.8.1+dfsg-2 [84.0 kB] Get:133 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfftw3-double3 ppc64el 3.3.8-2ubuntu6 [423 kB] Get:134 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfftw3-single3 ppc64el 3.3.8-2ubuntu6 [424 kB] Get:135 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfreetype6 ppc64el 2.10.2+dfsg-3 [420 kB] Get:136 http://ftpmaster.internal/ubuntu groovy/main ppc64el fonts-dejavu-core all 2.37-2 [1041 kB] Get:137 http://ftpmaster.internal/ubuntu groovy/main ppc64el fontconfig-config all 2.13.1-2ubuntu3 [28.8 kB] Get:138 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfontconfig1 ppc64el 2.13.1-2ubuntu3 [151 kB] Get:139 http://ftpmaster.internal/ubuntu groovy/main ppc64el libglvnd0 ppc64el 1.3.1-1ubuntu1 [52.6 kB] Get:140 http://ftpmaster.internal/ubuntu groovy/main ppc64el libglapi-mesa ppc64el 20.1.4-1 [28.0 kB] Get:141 http://ftpmaster.internal/ubuntu groovy/main ppc64el libx11-xcb1 ppc64el 2:1.6.9-2ubuntu1 [9280 B] Get:142 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-dri2-0 ppc64el 1.14-2 [7264 B] Get:143 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-dri3-0 ppc64el 1.14-2 [7092 B] Get:144 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-glx0 ppc64el 1.14-2 [23.4 kB] Get:145 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-present0 ppc64el 1.14-2 [5824 B] Get:146 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-sync1 ppc64el 1.14-2 [9352 B] Get:147 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxdamage1 ppc64el 1:1.1.5-2 [7260 B] Get:148 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxfixes3 ppc64el 1:5.0.3-2 [11.7 kB] Get:149 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxshmfence1 ppc64el 1.3-1 [5096 B] Get:150 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxxf86vm1 ppc64el 1:1.1.4-1build1 [11.3 kB] Get:151 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdrm-amdgpu1 ppc64el 2.4.102-1 [22.0 kB] Get:152 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdrm-nouveau2 ppc64el 2.4.102-1 [18.4 kB] Get:153 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdrm-radeon1 ppc64el 2.4.102-1 [24.6 kB] Get:154 http://ftpmaster.internal/ubuntu groovy/main ppc64el libllvm10 ppc64el 1:10.0.1-1 [15.4 MB] Get:155 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsensors-config all 1:3.6.0-2ubuntu1 [6092 B] Get:156 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsensors5 ppc64el 1:3.6.0-2ubuntu1 [31.7 kB] Get:157 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgl1-mesa-dri ppc64el 20.1.4-1 [8340 kB] Get:158 http://ftpmaster.internal/ubuntu groovy/main ppc64el libglx-mesa0 ppc64el 20.1.4-1 [165 kB] Get:159 http://ftpmaster.internal/ubuntu groovy/main ppc64el libglx0 ppc64el 1.3.1-1ubuntu1 [38.8 kB] Get:160 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgl1 ppc64el 1.3.1-1ubuntu1 [92.5 kB] Get:161 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libgl2ps1.4 ppc64el 1.4.2+dfsg1-1 [47.8 kB] Get:162 http://ftpmaster.internal/ubuntu groovy/main ppc64el libglu1-mesa ppc64el 9.0.1-1build1 [261 kB] Get:163 http://ftpmaster.internal/ubuntu groovy/main ppc64el libjbig0 ppc64el 2.1-3.1build1 [26.9 kB] Get:164 http://ftpmaster.internal/ubuntu groovy/main ppc64el libjpeg-turbo8 ppc64el 2.0.3-0ubuntu2 [155 kB] Get:165 http://ftpmaster.internal/ubuntu groovy/main ppc64el libjpeg8 ppc64el 8c-2ubuntu8 [2146 B] Get:166 http://ftpmaster.internal/ubuntu groovy/main ppc64el libwebp6 ppc64el 0.6.1-2 [225 kB] Get:167 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtiff5 ppc64el 4.1.0+git191117-2build1 [192 kB] Get:168 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblcms2-2 ppc64el 2.9-4 [186 kB] Get:169 http://ftpmaster.internal/ubuntu groovy/main ppc64el libwebpmux3 ppc64el 0.6.1-2 [21.0 kB] Get:170 http://ftpmaster.internal/ubuntu groovy/main ppc64el libwmf0.2-7 ppc64el 0.2.8.4-17ubuntu1 [180 kB] Get:171 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libgraphicsmagick-q16-3 ppc64el 1.4+really1.3.35+hg16297-1 [1305 kB] Get:172 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libgraphicsmagick++-q16-12 ppc64el 1.4+really1.3.35+hg16297-1 [107 kB] Get:173 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libaec0 ppc64el 1.0.4-1 [24.4 kB] Get:174 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libsz2 ppc64el 1.0.4-1 [5416 B] Get:175 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libhdf5-103-1 ppc64el 1.10.6+repack-2 [1120 kB] Get:176 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libqrupdate1 ppc64el 1.1.2-4 [37.4 kB] Get:177 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libumfpack5 ppc64el 1:5.8.1+dfsg-2 [254 kB] Get:178 http://ftpmaster.internal/ubuntu groovy/universe ppc64el liboctave7 ppc64el 5.2.0-3build1 [7402 kB] Get:179 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxrender1 ppc64el 1:0.9.10-1 [17.6 kB] Get:180 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcursor1 ppc64el 1:1.2.0-2 [24.1 kB] Get:181 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxft2 ppc64el 2.3.3-0ubuntu1 [46.7 kB] Get:182 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxinerama1 ppc64el 2:1.1.4-2 [7356 B] Get:183 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libfltk1.3 ppc64el 1.3.5-1 [592 kB] Get:184 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libfltk-gl1.3 ppc64el 1.3.5-1 [41.2 kB] Get:185 http://ftpmaster.internal/ubuntu groovy/main ppc64el libltdl7 ppc64el 2.4.6-14 [44.3 kB] Get:186 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libglpk40 ppc64el 4.65-2 [392 kB] Get:187 http://ftpmaster.internal/ubuntu groovy/main ppc64el libasound2-data all 1.2.2-2.3ubuntu1 [19.1 kB] Get:188 http://ftpmaster.internal/ubuntu groovy/main ppc64el libasound2 ppc64el 1.2.2-2.3ubuntu1 [372 kB] Get:189 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsamplerate0 ppc64el 0.1.9-2 [938 kB] Get:190 http://ftpmaster.internal/ubuntu groovy/main ppc64el libjack-jackd2-0 ppc64el 1.9.14-0ubuntu2 [284 kB] Get:191 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libportaudio2 ppc64el 19.6.0-1build1 [74.0 kB] Get:192 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libqhull8.0 ppc64el 2020.1-2 [194 kB] Get:193 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libqscintilla2-qt5-l10n all 2.11.2+dfsg-6 [41.3 kB] Get:194 http://ftpmaster.internal/ubuntu groovy-proposed/universe ppc64el libdouble-conversion3 ppc64el 3.1.5-5build1 [41.4 kB] Get:195 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpcre2-16-0 ppc64el 10.34-7 [188 kB] Get:196 http://ftpmaster.internal/ubuntu groovy-proposed/universe ppc64el libqt5core5a ppc64el 5.14.2+dfsg-5 [1789 kB] Get:197 http://ftpmaster.internal/ubuntu groovy/main ppc64el fontconfig ppc64el 2.13.1-2ubuntu3 [172 kB] Get:198 http://ftpmaster.internal/ubuntu groovy/main ppc64el libwayland-server0 ppc64el 1.18.0-1 [36.2 kB] Get:199 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgbm1 ppc64el 20.1.4-1 [37.8 kB] Get:200 http://ftpmaster.internal/ubuntu groovy/main ppc64el libwayland-client0 ppc64el 1.18.0-1 [27.8 kB] Get:201 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-xfixes0 ppc64el 1.14-2 [9820 B] Get:202 http://ftpmaster.internal/ubuntu groovy/main ppc64el libegl-mesa0 ppc64el 20.1.4-1 [118 kB] Get:203 http://ftpmaster.internal/ubuntu groovy/main ppc64el libegl1 ppc64el 1.3.1-1ubuntu1 [40.5 kB] Get:204 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgraphite2-3 ppc64el 1.3.14-1 [73.3 kB] Get:205 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libharfbuzz0b ppc64el 2.6.4-1ubuntu5 [425 kB] Get:206 http://ftpmaster.internal/ubuntu groovy/main ppc64el x11-common all 1:7.7+19ubuntu14 [22.3 kB] Get:207 http://ftpmaster.internal/ubuntu groovy/main ppc64el libice6 ppc64el 2:1.0.10-0ubuntu1 [46.1 kB] Get:208 http://ftpmaster.internal/ubuntu groovy/main ppc64el libevdev2 ppc64el 1.9.1+dfsg-1 [33.1 kB] Get:209 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmtdev1 ppc64el 1.1.6-1 [17.5 kB] Get:210 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgudev-1.0-0 ppc64el 1:233-1 [13.9 kB] Get:211 http://ftpmaster.internal/ubuntu groovy/main ppc64el libwacom-common all 1.3-2ubuntu1 [44.3 kB] Get:212 http://ftpmaster.internal/ubuntu groovy/main ppc64el libwacom2 ppc64el 1.3-2ubuntu1 [23.1 kB] Get:213 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libinput-bin ppc64el 1.16.0-1 [21.3 kB] Get:214 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libinput10 ppc64el 1.16.0-1 [126 kB] Get:215 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libmd4c0 ppc64el 0.4.4-1 [46.2 kB] Get:216 http://ftpmaster.internal/ubuntu groovy-proposed/universe ppc64el libqt5dbus5 ppc64el 5.14.2+dfsg-5 [201 kB] Get:217 http://ftpmaster.internal/ubuntu groovy-proposed/universe ppc64el libqt5network5 ppc64el 5.14.2+dfsg-5 [648 kB] Get:218 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsm6 ppc64el 2:1.2.3-1 [17.6 kB] Get:219 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-icccm4 ppc64el 0.4.1-1.1 [11.2 kB] Get:220 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-shm0 ppc64el 1.14-2 [5892 B] Get:221 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-util1 ppc64el 0.4.0-0ubuntu3 [11.0 kB] Get:222 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-image0 ppc64el 0.4.0-1build1 [12.4 kB] Get:223 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-keysyms1 ppc64el 0.4.0-1build1 [8756 B] Get:224 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-randr0 ppc64el 1.14-2 [17.5 kB] Get:225 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-render0 ppc64el 1.14-2 [15.7 kB] Get:226 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-render-util0 ppc64el 0.3.9-1build1 [10.7 kB] Get:227 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-shape0 ppc64el 1.14-2 [6220 B] Get:228 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-xinerama0 ppc64el 1.14-2 [5536 B] Get:229 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-xinput0 ppc64el 1.14-2 [32.8 kB] Get:230 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb-xkb1 ppc64el 1.14-2 [31.4 kB] Get:231 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxkbcommon0 ppc64el 0.10.0-1 [127 kB] Get:232 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxkbcommon-x11-0 ppc64el 0.10.0-1 [14.5 kB] Get:233 http://ftpmaster.internal/ubuntu groovy-proposed/universe ppc64el libqt5gui5 ppc64el 5.14.2+dfsg-5 [3287 kB] Get:234 http://ftpmaster.internal/ubuntu groovy/main ppc64el libavahi-common-data ppc64el 0.8-3ubuntu1 [25.1 kB] Get:235 http://ftpmaster.internal/ubuntu groovy/main ppc64el libavahi-common3 ppc64el 0.8-3ubuntu1 [23.0 kB] Get:236 http://ftpmaster.internal/ubuntu groovy/main ppc64el libavahi-client3 ppc64el 0.8-3ubuntu1 [28.1 kB] Get:237 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libcups2 ppc64el 2.3.3-2 [278 kB] Get:238 http://ftpmaster.internal/ubuntu groovy-proposed/universe ppc64el libqt5widgets5 ppc64el 5.14.2+dfsg-5 [2406 kB] Get:239 http://ftpmaster.internal/ubuntu groovy-proposed/universe ppc64el libqt5printsupport5 ppc64el 5.14.2+dfsg-5 [192 kB] Get:240 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libqscintilla2-qt5-15 ppc64el 2.11.2+dfsg-6 [1254 kB] Get:241 http://ftpmaster.internal/ubuntu groovy-proposed/universe ppc64el libqt5sql5 ppc64el 5.14.2+dfsg-5 [114 kB] Get:242 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libqt5help5 ppc64el 5.14.2-2 [153 kB] Get:243 http://ftpmaster.internal/ubuntu groovy-proposed/universe ppc64el libqt5xml5 ppc64el 5.14.2+dfsg-5 [111 kB] Get:244 http://ftpmaster.internal/ubuntu groovy/main ppc64el libogg0 ppc64el 1.3.4-0ubuntu1 [26.0 kB] Get:245 http://ftpmaster.internal/ubuntu groovy/main ppc64el libflac8 ppc64el 1.3.3-1build1 [130 kB] Get:246 http://ftpmaster.internal/ubuntu groovy/main ppc64el libvorbis0a ppc64el 1.3.6-2ubuntu2 [117 kB] Get:247 http://ftpmaster.internal/ubuntu groovy/main ppc64el libvorbisenc2 ppc64el 1.3.6-2ubuntu2 [76.4 kB] Get:248 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsndfile1 ppc64el 1.0.28-8 [235 kB] Get:249 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libtext-unidecode-perl all 1.30-1 [99.0 kB] Get:250 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxml-namespacesupport-perl all 1.12-1 [13.2 kB] Get:251 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxml-sax-base-perl all 1.09-1 [18.8 kB] Get:252 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxml-sax-perl all 1.02+dfsg-1 [56.2 kB] Get:253 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxml-libxml-perl ppc64el 2.0134+dfsg-2 [317 kB] Get:254 http://ftpmaster.internal/ubuntu groovy/universe ppc64el texinfo ppc64el 6.7.0.dfsg.2-5 [1380 kB] Get:255 http://ftpmaster.internal/ubuntu groovy/universe ppc64el octave-common all 5.2.0-3build1 [5131 kB] Get:256 http://ftpmaster.internal/ubuntu groovy/universe ppc64el octave ppc64el 5.2.0-3build1 [1936 kB] Get:257 http://ftpmaster.internal/ubuntu groovy/main ppc64el libncurses-dev ppc64el 6.2-1 [412 kB] Get:258 http://ftpmaster.internal/ubuntu groovy/main ppc64el libreadline-dev ppc64el 8.0-4 [179 kB] Get:259 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libhdf5-fortran-102 ppc64el 1.10.6+repack-2 [82.3 kB] Get:260 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libhdf5-hl-100 ppc64el 1.10.6+repack-2 [63.6 kB] Get:261 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libhdf5-hl-fortran-100 ppc64el 1.10.6+repack-2 [30.1 kB] Get:262 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libhdf5-cpp-103-1 ppc64el 1.10.6+repack-2 [112 kB] Get:263 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libhdf5-hl-cpp-100 ppc64el 1.10.6+repack-2 [10.1 kB] Get:264 http://ftpmaster.internal/ubuntu groovy/main ppc64el zlib1g-dev ppc64el 1:1.2.11.dfsg-2ubuntu1 [165 kB] Get:265 http://ftpmaster.internal/ubuntu groovy/main ppc64el libjpeg-turbo8-dev ppc64el 2.0.3-0ubuntu2 [276 kB] Get:266 http://ftpmaster.internal/ubuntu groovy/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu8 [1606 B] Get:267 http://ftpmaster.internal/ubuntu groovy/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu8 [1602 B] Get:268 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libaec-dev ppc64el 1.0.4-1 [56.6 kB] Get:269 http://ftpmaster.internal/ubuntu groovy/universe ppc64el hdf5-helpers ppc64el 1.10.6+repack-2 [13.7 kB] Get:270 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libhdf5-dev ppc64el 1.10.6+repack-2 [2731 kB] Get:271 http://ftpmaster.internal/ubuntu groovy/main ppc64el xorg-sgml-doctools all 1:1.11-1 [12.9 kB] Get:272 http://ftpmaster.internal/ubuntu groovy/main ppc64el x11proto-dev all 2019.2-1ubuntu1 [594 kB] Get:273 http://ftpmaster.internal/ubuntu groovy/main ppc64el x11proto-core-dev all 2019.2-1ubuntu1 [2620 B] Get:274 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxau-dev ppc64el 1:1.0.9-0ubuntu1 [10.1 kB] Get:275 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxdmcp-dev ppc64el 1:1.1.3-0ubuntu1 [27.0 kB] Get:276 http://ftpmaster.internal/ubuntu groovy/main ppc64el xtrans-dev all 1.4.0-1 [68.9 kB] Get:277 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpthread-stubs0-dev ppc64el 0.4-1 [5388 B] Get:278 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxcb1-dev ppc64el 1.14-2 [88.6 kB] Get:279 http://ftpmaster.internal/ubuntu groovy/main ppc64el libx11-dev ppc64el 2:1.6.9-2ubuntu1 [723 kB] Get:280 http://ftpmaster.internal/ubuntu groovy/main ppc64el libglx-dev ppc64el 1.3.1-1ubuntu1 [14.0 kB] Get:281 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgl-dev ppc64el 1.3.1-1ubuntu1 [97.9 kB] Get:282 http://ftpmaster.internal/ubuntu groovy/main ppc64el libegl-dev ppc64el 1.3.1-1ubuntu1 [16.9 kB] Get:283 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgles1 ppc64el 1.3.1-1ubuntu1 [11.8 kB] Get:284 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgles2 ppc64el 1.3.1-1ubuntu1 [17.4 kB] Get:285 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgles-dev ppc64el 1.3.1-1ubuntu1 [48.0 kB] Get:286 http://ftpmaster.internal/ubuntu groovy/main ppc64el libopengl0 ppc64el 1.3.1-1ubuntu1 [32.3 kB] Get:287 http://ftpmaster.internal/ubuntu groovy/main ppc64el libopengl-dev ppc64el 1.3.1-1ubuntu1 [3580 B] Get:288 http://ftpmaster.internal/ubuntu groovy/main ppc64el libglvnd-dev ppc64el 1.3.1-1ubuntu1 [11.6 kB] Get:289 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgl1-mesa-dev ppc64el 20.1.4-1 [6324 B] Get:290 http://ftpmaster.internal/ubuntu groovy/main ppc64el libblas-dev ppc64el 3.9.0-2 [224 kB] Get:291 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblapack-dev ppc64el 3.9.0-2 [4434 kB] Get:292 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfftw3-long3 ppc64el 3.3.8-2ubuntu6 [603 kB] Get:293 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfftw3-bin ppc64el 3.3.8-2ubuntu6 [30.4 kB] Get:294 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfftw3-dev ppc64el 3.3.8-2ubuntu6 [1274 kB] Get:295 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgfortran-10-dev ppc64el 10.2.0-3ubuntu1 [499 kB] Get:296 http://ftpmaster.internal/ubuntu groovy/main ppc64el gfortran-10 ppc64el 10.2.0-3ubuntu1 [7885 kB] Get:297 http://ftpmaster.internal/ubuntu groovy/main ppc64el gfortran ppc64el 4:10.1.0-1ubuntu1 [1372 B] Get:298 http://ftpmaster.internal/ubuntu groovy/universe ppc64el liboctave-dev ppc64el 5.2.0-3build1 [469 kB] Get:299 http://ftpmaster.internal/ubuntu groovy/main ppc64el libapt-pkg-perl ppc64el 0.1.36build3 [69.2 kB] Get:300 http://ftpmaster.internal/ubuntu groovy/main ppc64el libarray-intspan-perl all 2.004-1 [24.5 kB] Get:301 http://ftpmaster.internal/ubuntu groovy/main ppc64el libyaml-libyaml-perl ppc64el 0.82+repack-1 [29.4 kB] Get:302 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libconfig-model-backend-yaml-perl all 2.133-2 [10.6 kB] Get:303 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libexporter-lite-perl all 0.08-1 [9916 B] Get:304 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libalgorithm-c3-perl all 0.10-1 [11.3 kB] Get:305 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libclass-c3-perl all 0.34-1 [18.9 kB] Get:306 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libmro-compat-perl all 0.13-1 [11.2 kB] Get:307 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libdata-section-perl all 0.200007-1 [11.8 kB] Get:308 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libtext-template-perl all 1.59-1 [48.5 kB] Get:309 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libsoftware-license-perl all 0.103014-2 [108 kB] Get:310 http://ftpmaster.internal/ubuntu groovy/main ppc64el libyaml-tiny-perl all 1.73-1 [25.2 kB] Get:311 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libsoftware-licensemoreutils-perl all 1.004-1 [19.7 kB] Get:312 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsort-versions-perl all 1.62-1 [9294 B] Get:313 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libtext-reform-perl all 1.20-3 [36.1 kB] Get:314 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libtext-autoformat-perl all 1.750000-1 [30.2 kB] Get:315 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libtext-levenshtein-damerau-perl all 0.41-1 [11.7 kB] Get:316 http://ftpmaster.internal/ubuntu groovy/main ppc64el liburi-perl all 1.76-2 [77.5 kB] Get:317 http://ftpmaster.internal/ubuntu groovy/main ppc64el libencode-locale-perl all 1.05-1 [12.3 kB] Get:318 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtimedate-perl all 2.3300-1 [33.9 kB] Get:319 http://ftpmaster.internal/ubuntu groovy/main ppc64el libhttp-date-perl all 6.05-1 [9920 B] Get:320 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfile-listing-perl all 6.04-1 [9774 B] Get:321 http://ftpmaster.internal/ubuntu groovy/main ppc64el libhtml-tagset-perl all 3.20-4 [12.5 kB] Get:322 http://ftpmaster.internal/ubuntu groovy/main ppc64el libhtml-parser-perl ppc64el 3.72-5 [89.8 kB] Get:323 http://ftpmaster.internal/ubuntu groovy/main ppc64el libhtml-tree-perl all 5.07-2 [200 kB] Get:324 http://ftpmaster.internal/ubuntu groovy/main ppc64el libio-html-perl all 1.001-1 [14.9 kB] Get:325 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblwp-mediatypes-perl all 6.04-1 [19.5 kB] Get:326 http://ftpmaster.internal/ubuntu groovy/main ppc64el libhttp-message-perl all 6.25-1 [75.9 kB] Get:327 http://ftpmaster.internal/ubuntu groovy/main ppc64el libhttp-cookies-perl all 6.08-1 [18.3 kB] Get:328 http://ftpmaster.internal/ubuntu groovy/main ppc64el libhttp-negotiate-perl all 6.01-1 [12.5 kB] Get:329 http://ftpmaster.internal/ubuntu groovy/main ppc64el perl-openssl-defaults ppc64el 5 [7400 B] Get:330 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnet-ssleay-perl ppc64el 1.88-2ubuntu1 [290 kB] Get:331 http://ftpmaster.internal/ubuntu groovy/main ppc64el libio-socket-ssl-perl all 2.067-1 [176 kB] Get:332 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnet-http-perl all 6.19-1 [22.8 kB] Get:333 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblwp-protocol-https-perl all 6.09-1 [10.9 kB] Get:334 http://ftpmaster.internal/ubuntu groovy/main ppc64el libwww-robotrules-perl all 6.02-1 [12.6 kB] Get:335 http://ftpmaster.internal/ubuntu groovy/main ppc64el libwww-perl all 6.46-1 [140 kB] Get:336 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblist-someutils-perl all 0.58-1 [29.7 kB] Get:337 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblog-any-perl all 1.708-1 [67.8 kB] Get:338 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblog-any-adapter-screen-perl all 0.140-1 [12.1 kB] Get:339 http://ftpmaster.internal/ubuntu groovy/main ppc64el libclass-method-modifiers-perl all 2.13-1 [16.2 kB] Get:340 http://ftpmaster.internal/ubuntu groovy/main ppc64el libimport-into-perl all 1.002005-1 [11.0 kB] Get:341 http://ftpmaster.internal/ubuntu groovy/main ppc64el librole-tiny-perl all 2.001004-1 [16.5 kB] Get:342 http://ftpmaster.internal/ubuntu groovy/main ppc64el libstrictures-perl all 2.000006-1 [16.3 kB] Get:343 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsub-quote-perl all 2.006006-1 [19.5 kB] Get:344 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmoo-perl all 2.004000-1 [46.9 kB] Get:345 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsub-exporter-progressive-perl all 0.001013-1 [6784 B] Get:346 http://ftpmaster.internal/ubuntu groovy/main ppc64el libvariable-magic-perl ppc64el 0.62-1build2 [35.0 kB] Get:347 http://ftpmaster.internal/ubuntu groovy/main ppc64el libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] Get:348 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsub-identify-perl ppc64el 0.14-1build2 [10.8 kB] Get:349 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsub-name-perl ppc64el 0.26-1 [11.7 kB] Get:350 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnamespace-clean-perl all 0.27-1 [13.6 kB] Get:351 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnamespace-autoclean-perl all 0.29-1 [12.5 kB] Get:352 http://ftpmaster.internal/ubuntu groovy/main ppc64el libhash-fieldhash-perl ppc64el 0.15-1build2 [17.5 kB] Get:353 http://ftpmaster.internal/ubuntu groovy/main ppc64el libobject-id-perl all 0.1.2-2ubuntu1 [15.9 kB] Get:354 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtype-tiny-perl all 1.010002-1 [309 kB] Get:355 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmoox-struct-perl all 0.020-1 [23.7 kB] Get:356 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnumber-compare-perl all 0.03-1 [7318 B] Get:357 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtext-glob-perl all 0.11-1 [7992 B] Get:358 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpath-iterator-rule-perl all 1.014-1 [49.5 kB] Get:359 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpod-constants-perl all 0.19-2 [16.3 kB] Get:360 http://ftpmaster.internal/ubuntu groovy/main ppc64el libre2-8 ppc64el 20200801+dfsg-1 [174 kB] Get:361 http://ftpmaster.internal/ubuntu groovy/main ppc64el libre-engine-re2-perl ppc64el 0.13-5build3 [16.7 kB] Get:362 http://ftpmaster.internal/ubuntu groovy/main ppc64el libregexp-pattern-license-perl all 3.4.0-1 [49.4 kB] Get:363 http://ftpmaster.internal/ubuntu groovy/main ppc64el libregexp-pattern-perl all 0.2.14-1 [17.6 kB] Get:364 http://ftpmaster.internal/ubuntu groovy/main ppc64el libsort-key-perl ppc64el 1.33-2build2 [36.5 kB] Get:365 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnumber-range-perl all 0.12-1 [8556 B] Get:366 http://ftpmaster.internal/ubuntu groovy/main ppc64el libstring-copyright-perl all 0.003006-1 [9608 B] Get:367 http://ftpmaster.internal/ubuntu groovy/main ppc64el libstring-escape-perl all 2010.002-2 [17.6 kB] Get:368 http://ftpmaster.internal/ubuntu groovy/main ppc64el licensecheck all 3.0.47-1 [37.0 kB] Get:369 http://ftpmaster.internal/ubuntu groovy/main ppc64el diffstat ppc64el 1.63-1 [30.0 kB] Get:370 http://ftpmaster.internal/ubuntu groovy/main ppc64el libclass-xsaccessor-perl ppc64el 1.19-3build5 [34.8 kB] Get:371 http://ftpmaster.internal/ubuntu groovy/main ppc64el libclone-perl ppc64el 0.45-1 [10.8 kB] Get:372 http://ftpmaster.internal/ubuntu groovy/main ppc64el libconfig-tiny-perl all 2.24-1 [12.4 kB] Get:373 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcpanel-json-xs-perl ppc64el 4.19-1build1 [112 kB] Get:374 http://ftpmaster.internal/ubuntu groovy/main ppc64el libaliased-perl all 0.34-1 [13.2 kB] Get:375 http://ftpmaster.internal/ubuntu groovy/main ppc64el libclass-data-inheritable-perl all 0.08-3 [8084 B] Get:376 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdevel-stacktrace-perl all 2.0400-1 [22.7 kB] Get:377 http://ftpmaster.internal/ubuntu groovy/main ppc64el libexception-class-perl all 1.44-1 [25.9 kB] Get:378 http://ftpmaster.internal/ubuntu groovy/main ppc64el libiterator-perl all 0.03+ds1-1 [18.7 kB] Get:379 http://ftpmaster.internal/ubuntu groovy/main ppc64el libiterator-util-perl all 0.02+ds1-1 [14.0 kB] Get:380 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdata-dpath-perl all 0.58-1 [38.8 kB] Get:381 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnet-domain-tld-perl all 1.75-1 [29.1 kB] Get:382 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdata-validate-domain-perl all 0.10-1 [11.0 kB] Get:383 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdevel-size-perl ppc64el 0.83-1build1 [20.4 kB] Get:384 http://ftpmaster.internal/ubuntu groovy/main ppc64el libemail-address-xs-perl ppc64el 1.04-1build3 [30.1 kB] Get:385 http://ftpmaster.internal/ubuntu groovy/main ppc64el libipc-system-simple-perl all 1.30-1 [23.2 kB] Get:386 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfile-basedir-perl all 0.08-1 [16.9 kB] Get:387 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfile-find-rule-perl all 0.34-1 [28.3 kB] Get:388 http://ftpmaster.internal/ubuntu groovy/main ppc64el libio-string-perl all 1.08-3 [11.1 kB] Get:389 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfont-ttf-perl all 1.06-1 [313 kB] Get:390 http://ftpmaster.internal/ubuntu groovy/main ppc64el libfuture-perl all 0.45-1 [78.5 kB] Get:391 http://ftpmaster.internal/ubuntu groovy/main ppc64el libstruct-dumb-perl all 0.12-1 [12.0 kB] Get:392 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmetrics-any-perl all 0.06-1 [40.8 kB] Get:393 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtest-metrics-any-perl all 0.01-2 [6944 B] Get:394 http://ftpmaster.internal/ubuntu groovy/main ppc64el libio-async-perl all 0.77-3 [257 kB] Get:395 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblinux-epoll-perl ppc64el 0.017-1 [18.0 kB] Get:396 http://ftpmaster.internal/ubuntu groovy/main ppc64el libio-async-loop-epoll-perl all 0.21-1 [10.4 kB] Get:397 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libipc-run3-perl all 0.048-2 [31.4 kB] Get:398 http://ftpmaster.internal/ubuntu groovy/main ppc64el libjson-maybexs-perl all 1.004002-1 [11.3 kB] Get:399 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblist-compare-perl all 0.53-1 [65.6 kB] Get:400 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblist-utilsby-perl all 0.11-1 [14.7 kB] Get:401 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmoox-aliases-perl all 0.001006-1 [7176 B] Get:402 http://ftpmaster.internal/ubuntu groovy/main ppc64el libperlio-gzip-perl ppc64el 0.19-1build5 [15.2 kB] Get:403 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libsereal-decoder-perl ppc64el 4.017+ds-1 [118 kB] Get:404 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libsereal-encoder-perl ppc64el 4.017+ds-1 [112 kB] Get:405 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libtext-levenshteinxs-perl ppc64el 0.03-4build7 [9180 B] Get:406 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdata-messagepack-perl ppc64el 1.00-2ubuntu1 [33.9 kB] Get:407 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libtext-xslate-perl ppc64el 3.5.8-1build1 [184 kB] Get:408 http://ftpmaster.internal/ubuntu groovy/main ppc64el libtime-duration-perl all 1.21-1 [13.1 kB] Get:409 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el libtime-moment-perl ppc64el 0.44-1build3 [74.7 kB] Get:410 http://ftpmaster.internal/ubuntu groovy/main ppc64el libunicode-utf8-perl ppc64el 0.62-1build1 [19.0 kB] Get:411 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxml-writer-perl all 0.625-1 [24.9 kB] Get:412 http://ftpmaster.internal/ubuntu groovy/universe ppc64el lzip ppc64el 1.21-7 [80.0 kB] Get:413 http://ftpmaster.internal/ubuntu groovy/main ppc64el patchutils ppc64el 0.4.2-1 [80.8 kB] Get:414 http://ftpmaster.internal/ubuntu groovy/main ppc64el t1utils ppc64el 1.41-4 [62.0 kB] Get:415 http://ftpmaster.internal/ubuntu groovy-proposed/main ppc64el lintian all 2.86.0 [993 kB] Get:416 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libconfig-model-dpkg-perl all 2.138 [194 kB] Get:417 http://ftpmaster.internal/ubuntu groovy/main ppc64el liberror-perl all 0.17029-1 [26.5 kB] Get:418 http://ftpmaster.internal/ubuntu groovy/universe ppc64el libparse-debcontrol-perl all 2.005-4 [24.2 kB] Get:419 http://ftpmaster.internal/ubuntu groovy/main ppc64el libconvert-binhex-perl all 1.125-1 [29.7 kB] Get:420 http://ftpmaster.internal/ubuntu groovy/main ppc64el libnet-smtp-ssl-perl all 1.04-1 [5948 B] Get:421 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmailtools-perl all 2.21-1 [80.7 kB] Get:422 http://ftpmaster.internal/ubuntu groovy/main ppc64el libmime-tools-perl all 5.509-1 [192 kB] Get:423 http://ftpmaster.internal/ubuntu groovy/universe ppc64el aglfn all 1.7+git20191031.4036a9c-2 [30.6 kB] Get:424 http://ftpmaster.internal/ubuntu groovy/universe ppc64el gnuplot-data all 5.2.8+dfsg1-2 [56.5 kB] Get:425 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpixman-1-0 ppc64el 0.38.4-0ubuntu1 [267 kB] Get:426 http://ftpmaster.internal/ubuntu groovy/main ppc64el libcairo2 ppc64el 1.16.0-4ubuntu1 [692 kB] Get:427 http://ftpmaster.internal/ubuntu groovy/main ppc64el libxpm4 ppc64el 1:3.5.12-1 [35.9 kB] Get:428 http://ftpmaster.internal/ubuntu groovy/main ppc64el libgd3 ppc64el 2.3.0-2 [142 kB] Get:429 http://ftpmaster.internal/ubuntu groovy/main ppc64el liblua5.3-0 ppc64el 5.3.3-1.1ubuntu2 [146 kB] Get:430 http://ftpmaster.internal/ubuntu groovy/main ppc64el libthai-data all 0.1.28-3 [134 kB] Get:431 http://ftpmaster.internal/ubuntu groovy/main ppc64el libdatrie1 ppc64el 0.2.12-3 [20.4 kB] Get:432 http://ftpmaster.internal/ubuntu groovy/main ppc64el libthai0 ppc64el 0.1.28-3 [19.4 kB] Get:433 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpango-1.0-0 ppc64el 1.44.7-2ubuntu4 [178 kB] Get:434 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpangoft2-1.0-0 ppc64el 1.44.7-2ubuntu4 [39.1 kB] Get:435 http://ftpmaster.internal/ubuntu groovy/main ppc64el libpangocairo-1.0-0 ppc64el 1.44.7-2ubuntu4 [26.9 kB] Get:436 http://ftpmaster.internal/ubuntu groovy/universe ppc64el gnuplot-nox ppc64el 5.2.8+dfsg1-2 [867 kB] Get:437 http://ftpmaster.internal/ubuntu groovy/universe ppc64el fonts-freefont-otf all 20120503-10 [3056 kB] Get:438 http://ftpmaster.internal/ubuntu groovy/universe ppc64el dh-octave-autopkgtest all 0.7.6 [8016 B] Get:439 http://ftpmaster.internal/ubuntu groovy/universe ppc64el dh-octave all 0.7.6 [19.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 126 MB in 3s (44.5 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 12835 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36-2ubuntu1_ppc64el.deb ... Unpacking bsdextrautils (2.36-2ubuntu1) ... Selecting previously unselected package libuchardet0:ppc64el. Preparing to unpack .../001-libuchardet0_0.0.7-1_ppc64el.deb ... Unpacking libuchardet0:ppc64el (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-5_ppc64el.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:ppc64el. Preparing to unpack .../003-libpipeline1_1.5.2-2build1_ppc64el.deb ... Unpacking libpipeline1:ppc64el (1.5.2-2build1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.3-2_ppc64el.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package ucf. Preparing to unpack .../005-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... 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Unpacking libmodule-pluggable-perl (5.2-1) ... Selecting previously unselected package libstring-rewriteprefix-perl. Preparing to unpack .../063-libstring-rewriteprefix-perl_0.008-1_all.deb ... Unpacking libstring-rewriteprefix-perl (0.008-1) ... Selecting previously unselected package libapp-cmd-perl. Preparing to unpack .../064-libapp-cmd-perl_0.331-1_all.deb ... Unpacking libapp-cmd-perl (0.331-1) ... Selecting previously unselected package libboolean-perl. Preparing to unpack .../065-libboolean-perl_0.46-1_all.deb ... Unpacking libboolean-perl (0.46-1) ... Selecting previously unselected package libcarp-assert-perl. Preparing to unpack .../066-libcarp-assert-perl_0.21-1_all.deb ... Unpacking libcarp-assert-perl (0.21-1) ... Selecting previously unselected package libsub-uplevel-perl. Preparing to unpack .../067-libsub-uplevel-perl_0.2800-1_all.deb ... Unpacking libsub-uplevel-perl (0.2800-1) ... Selecting previously unselected package libtest-exception-perl. 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Selecting previously unselected package libsamplerate0:ppc64el. Preparing to unpack .../187-libsamplerate0_0.1.9-2_ppc64el.deb ... Unpacking libsamplerate0:ppc64el (0.1.9-2) ... Selecting previously unselected package libjack-jackd2-0:ppc64el. Preparing to unpack .../188-libjack-jackd2-0_1.9.14-0ubuntu2_ppc64el.deb ... Unpacking libjack-jackd2-0:ppc64el (1.9.14-0ubuntu2) ... Selecting previously unselected package libportaudio2:ppc64el. Preparing to unpack .../189-libportaudio2_19.6.0-1build1_ppc64el.deb ... Unpacking libportaudio2:ppc64el (19.6.0-1build1) ... Selecting previously unselected package libqhull8.0:ppc64el. Preparing to unpack .../190-libqhull8.0_2020.1-2_ppc64el.deb ... Unpacking libqhull8.0:ppc64el (2020.1-2) ... Selecting previously unselected package libqscintilla2-qt5-l10n. Preparing to unpack .../191-libqscintilla2-qt5-l10n_2.11.2+dfsg-6_all.deb ... Unpacking libqscintilla2-qt5-l10n (2.11.2+dfsg-6) ... Selecting previously unselected package libdouble-conversion3:ppc64el. Preparing to unpack .../192-libdouble-conversion3_3.1.5-5build1_ppc64el.deb ... Unpacking libdouble-conversion3:ppc64el (3.1.5-5build1) ... Selecting previously unselected package libpcre2-16-0:ppc64el. Preparing to unpack .../193-libpcre2-16-0_10.34-7_ppc64el.deb ... Unpacking libpcre2-16-0:ppc64el (10.34-7) ... Selecting previously unselected package libqt5core5a:ppc64el. Preparing to unpack .../194-libqt5core5a_5.14.2+dfsg-5_ppc64el.deb ... Unpacking libqt5core5a:ppc64el (5.14.2+dfsg-5) ... Selecting previously unselected package fontconfig. Preparing to unpack .../195-fontconfig_2.13.1-2ubuntu3_ppc64el.deb ... Unpacking fontconfig (2.13.1-2ubuntu3) ... Selecting previously unselected package libwayland-server0:ppc64el. Preparing to unpack .../196-libwayland-server0_1.18.0-1_ppc64el.deb ... Unpacking libwayland-server0:ppc64el (1.18.0-1) ... Selecting previously unselected package libgbm1:ppc64el. 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Selecting previously unselected package libharfbuzz0b:ppc64el. Preparing to unpack .../203-libharfbuzz0b_2.6.4-1ubuntu5_ppc64el.deb ... Unpacking libharfbuzz0b:ppc64el (2.6.4-1ubuntu5) ... Selecting previously unselected package x11-common. Preparing to unpack .../204-x11-common_1%3a7.7+19ubuntu14_all.deb ... dpkg-query: no packages found matching nux-tools Unpacking x11-common (1:7.7+19ubuntu14) ... Selecting previously unselected package libice6:ppc64el. Preparing to unpack .../205-libice6_2%3a1.0.10-0ubuntu1_ppc64el.deb ... Unpacking libice6:ppc64el (2:1.0.10-0ubuntu1) ... Selecting previously unselected package libevdev2:ppc64el. Preparing to unpack .../206-libevdev2_1.9.1+dfsg-1_ppc64el.deb ... Unpacking libevdev2:ppc64el (1.9.1+dfsg-1) ... Selecting previously unselected package libmtdev1:ppc64el. Preparing to unpack .../207-libmtdev1_1.1.6-1_ppc64el.deb ... Unpacking libmtdev1:ppc64el (1.1.6-1) ... Selecting previously unselected package libgudev-1.0-0:ppc64el. 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Selecting previously unselected package libqt5dbus5:ppc64el. Preparing to unpack .../214-libqt5dbus5_5.14.2+dfsg-5_ppc64el.deb ... Unpacking libqt5dbus5:ppc64el (5.14.2+dfsg-5) ... Selecting previously unselected package libqt5network5:ppc64el. Preparing to unpack .../215-libqt5network5_5.14.2+dfsg-5_ppc64el.deb ... Unpacking libqt5network5:ppc64el (5.14.2+dfsg-5) ... Selecting previously unselected package libsm6:ppc64el. Preparing to unpack .../216-libsm6_2%3a1.2.3-1_ppc64el.deb ... Unpacking libsm6:ppc64el (2:1.2.3-1) ... Selecting previously unselected package libxcb-icccm4:ppc64el. Preparing to unpack .../217-libxcb-icccm4_0.4.1-1.1_ppc64el.deb ... Unpacking libxcb-icccm4:ppc64el (0.4.1-1.1) ... Selecting previously unselected package libxcb-shm0:ppc64el. Preparing to unpack .../218-libxcb-shm0_1.14-2_ppc64el.deb ... Unpacking libxcb-shm0:ppc64el (1.14-2) ... Selecting previously unselected package libxcb-util1:ppc64el. 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Unpacking libxcb-render-util0:ppc64el (0.3.9-1build1) ... Selecting previously unselected package libxcb-shape0:ppc64el. Preparing to unpack .../225-libxcb-shape0_1.14-2_ppc64el.deb ... Unpacking libxcb-shape0:ppc64el (1.14-2) ... Selecting previously unselected package libxcb-xinerama0:ppc64el. Preparing to unpack .../226-libxcb-xinerama0_1.14-2_ppc64el.deb ... Unpacking libxcb-xinerama0:ppc64el (1.14-2) ... Selecting previously unselected package libxcb-xinput0:ppc64el. Preparing to unpack .../227-libxcb-xinput0_1.14-2_ppc64el.deb ... Unpacking libxcb-xinput0:ppc64el (1.14-2) ... Selecting previously unselected package libxcb-xkb1:ppc64el. Preparing to unpack .../228-libxcb-xkb1_1.14-2_ppc64el.deb ... Unpacking libxcb-xkb1:ppc64el (1.14-2) ... Selecting previously unselected package libxkbcommon0:ppc64el. Preparing to unpack .../229-libxkbcommon0_0.10.0-1_ppc64el.deb ... Unpacking libxkbcommon0:ppc64el (0.10.0-1) ... Selecting previously unselected package libxkbcommon-x11-0:ppc64el. Preparing to unpack .../230-libxkbcommon-x11-0_0.10.0-1_ppc64el.deb ... Unpacking libxkbcommon-x11-0:ppc64el (0.10.0-1) ... Selecting previously unselected package libqt5gui5:ppc64el. Preparing to unpack .../231-libqt5gui5_5.14.2+dfsg-5_ppc64el.deb ... Unpacking libqt5gui5:ppc64el (5.14.2+dfsg-5) ... Selecting previously unselected package libavahi-common-data:ppc64el. Preparing to unpack .../232-libavahi-common-data_0.8-3ubuntu1_ppc64el.deb ... Unpacking libavahi-common-data:ppc64el (0.8-3ubuntu1) ... Selecting previously unselected package libavahi-common3:ppc64el. Preparing to unpack .../233-libavahi-common3_0.8-3ubuntu1_ppc64el.deb ... Unpacking libavahi-common3:ppc64el (0.8-3ubuntu1) ... Selecting previously unselected package libavahi-client3:ppc64el. Preparing to unpack .../234-libavahi-client3_0.8-3ubuntu1_ppc64el.deb ... Unpacking libavahi-client3:ppc64el (0.8-3ubuntu1) ... Selecting previously unselected package libcups2:ppc64el. Preparing to unpack .../235-libcups2_2.3.3-2_ppc64el.deb ... Unpacking libcups2:ppc64el (2.3.3-2) ... Selecting previously unselected package libqt5widgets5:ppc64el. Preparing to unpack .../236-libqt5widgets5_5.14.2+dfsg-5_ppc64el.deb ... Unpacking libqt5widgets5:ppc64el (5.14.2+dfsg-5) ... Selecting previously unselected package libqt5printsupport5:ppc64el. Preparing to unpack .../237-libqt5printsupport5_5.14.2+dfsg-5_ppc64el.deb ... Unpacking libqt5printsupport5:ppc64el (5.14.2+dfsg-5) ... Selecting previously unselected package libqscintilla2-qt5-15. Preparing to unpack .../238-libqscintilla2-qt5-15_2.11.2+dfsg-6_ppc64el.deb ... Unpacking libqscintilla2-qt5-15 (2.11.2+dfsg-6) ... Selecting previously unselected package libqt5sql5:ppc64el. Preparing to unpack .../239-libqt5sql5_5.14.2+dfsg-5_ppc64el.deb ... Unpacking libqt5sql5:ppc64el (5.14.2+dfsg-5) ... Selecting previously unselected package libqt5help5:ppc64el. Preparing to unpack .../240-libqt5help5_5.14.2-2_ppc64el.deb ... Unpacking libqt5help5:ppc64el (5.14.2-2) ... Selecting previously unselected package libqt5xml5:ppc64el. Preparing to unpack .../241-libqt5xml5_5.14.2+dfsg-5_ppc64el.deb ... Unpacking libqt5xml5:ppc64el (5.14.2+dfsg-5) ... Selecting previously unselected package libogg0:ppc64el. Preparing to unpack .../242-libogg0_1.3.4-0ubuntu1_ppc64el.deb ... Unpacking libogg0:ppc64el (1.3.4-0ubuntu1) ... Selecting previously unselected package libflac8:ppc64el. Preparing to unpack .../243-libflac8_1.3.3-1build1_ppc64el.deb ... Unpacking libflac8:ppc64el (1.3.3-1build1) ... Selecting previously unselected package libvorbis0a:ppc64el. Preparing to unpack .../244-libvorbis0a_1.3.6-2ubuntu2_ppc64el.deb ... Unpacking libvorbis0a:ppc64el (1.3.6-2ubuntu2) ... Selecting previously unselected package libvorbisenc2:ppc64el. Preparing to unpack .../245-libvorbisenc2_1.3.6-2ubuntu2_ppc64el.deb ... Unpacking libvorbisenc2:ppc64el (1.3.6-2ubuntu2) ... Selecting previously unselected package libsndfile1:ppc64el. Preparing to unpack .../246-libsndfile1_1.0.28-8_ppc64el.deb ... Unpacking libsndfile1:ppc64el (1.0.28-8) ... Selecting previously unselected package libtext-unidecode-perl. Preparing to unpack .../247-libtext-unidecode-perl_1.30-1_all.deb ... Unpacking libtext-unidecode-perl (1.30-1) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../248-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../249-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../250-libxml-sax-perl_1.02+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-1) ... 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Unpacking libreadline-dev:ppc64el (8.0-4) ... Selecting previously unselected package libhdf5-fortran-102:ppc64el. Preparing to unpack .../257-libhdf5-fortran-102_1.10.6+repack-2_ppc64el.deb ... Unpacking libhdf5-fortran-102:ppc64el (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-hl-100:ppc64el. Preparing to unpack .../258-libhdf5-hl-100_1.10.6+repack-2_ppc64el.deb ... Unpacking libhdf5-hl-100:ppc64el (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-hl-fortran-100:ppc64el. Preparing to unpack .../259-libhdf5-hl-fortran-100_1.10.6+repack-2_ppc64el.deb ... Unpacking libhdf5-hl-fortran-100:ppc64el (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-cpp-103-1:ppc64el. Preparing to unpack .../260-libhdf5-cpp-103-1_1.10.6+repack-2_ppc64el.deb ... Unpacking libhdf5-cpp-103-1:ppc64el (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-hl-cpp-100:ppc64el. 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Preparing to unpack .../266-libaec-dev_1.0.4-1_ppc64el.deb ... Unpacking libaec-dev:ppc64el (1.0.4-1) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../267-hdf5-helpers_1.10.6+repack-2_ppc64el.deb ... Unpacking hdf5-helpers (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-dev. Preparing to unpack .../268-libhdf5-dev_1.10.6+repack-2_ppc64el.deb ... Unpacking libhdf5-dev (1.10.6+repack-2) ... Selecting previously unselected package xorg-sgml-doctools. Preparing to unpack .../269-xorg-sgml-doctools_1%3a1.11-1_all.deb ... Unpacking xorg-sgml-doctools (1:1.11-1) ... Selecting previously unselected package x11proto-dev. Preparing to unpack .../270-x11proto-dev_2019.2-1ubuntu1_all.deb ... Unpacking x11proto-dev (2019.2-1ubuntu1) ... Selecting previously unselected package x11proto-core-dev. Preparing to unpack .../271-x11proto-core-dev_2019.2-1ubuntu1_all.deb ... Unpacking x11proto-core-dev (2019.2-1ubuntu1) ... Selecting previously unselected package libxau-dev:ppc64el. Preparing to unpack .../272-libxau-dev_1%3a1.0.9-0ubuntu1_ppc64el.deb ... Unpacking libxau-dev:ppc64el (1:1.0.9-0ubuntu1) ... Selecting previously unselected package libxdmcp-dev:ppc64el. Preparing to unpack .../273-libxdmcp-dev_1%3a1.1.3-0ubuntu1_ppc64el.deb ... Unpacking libxdmcp-dev:ppc64el (1:1.1.3-0ubuntu1) ... Selecting previously unselected package xtrans-dev. Preparing to unpack .../274-xtrans-dev_1.4.0-1_all.deb ... Unpacking xtrans-dev (1.4.0-1) ... Selecting previously unselected package libpthread-stubs0-dev:ppc64el. Preparing to unpack .../275-libpthread-stubs0-dev_0.4-1_ppc64el.deb ... Unpacking libpthread-stubs0-dev:ppc64el (0.4-1) ... Selecting previously unselected package libxcb1-dev:ppc64el. Preparing to unpack .../276-libxcb1-dev_1.14-2_ppc64el.deb ... Unpacking libxcb1-dev:ppc64el (1.14-2) ... Selecting previously unselected package libx11-dev:ppc64el. 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Selecting previously unselected package libnamespace-clean-perl. Preparing to unpack .../348-libnamespace-clean-perl_0.27-1_all.deb ... Unpacking libnamespace-clean-perl (0.27-1) ... Selecting previously unselected package libnamespace-autoclean-perl. Preparing to unpack .../349-libnamespace-autoclean-perl_0.29-1_all.deb ... Unpacking libnamespace-autoclean-perl (0.29-1) ... Selecting previously unselected package libhash-fieldhash-perl. Preparing to unpack .../350-libhash-fieldhash-perl_0.15-1build2_ppc64el.deb ... Unpacking libhash-fieldhash-perl (0.15-1build2) ... Selecting previously unselected package libobject-id-perl. Preparing to unpack .../351-libobject-id-perl_0.1.2-2ubuntu1_all.deb ... Unpacking libobject-id-perl (0.1.2-2ubuntu1) ... Selecting previously unselected package libtype-tiny-perl. Preparing to unpack .../352-libtype-tiny-perl_1.010002-1_all.deb ... Unpacking libtype-tiny-perl (1.010002-1) ... Selecting previously unselected package libmoox-struct-perl. 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Setting up libgraphite2-3:ppc64el (1.3.14-1) ... Setting up libstring-escape-perl (2010.002-2) ... Setting up liblcms2-2:ppc64el (2.9-4) ... Setting up libpixman-1-0:ppc64el (0.38.4-0ubuntu1) ... Setting up libwayland-server0:ppc64el (1.18.0-1) ... Setting up libx11-xcb1:ppc64el (2:1.6.9-2ubuntu1) ... Setting up libfile-which-perl (1.23-1) ... Setting up libxau6:ppc64el (1:1.0.9-0ubuntu1) ... Setting up libdouble-conversion3:ppc64el (3.1.5-5build1) ... Setting up libkeyutils1:ppc64el (1.6.1-2ubuntu1) ... Setting up libncurses-dev:ppc64el (6.2-1) ... Setting up libpsl5:ppc64el (0.21.0-1.1) ... Setting up libnumber-range-perl (0.12-1) ... Setting up libunicode-utf8-perl (0.62-1build1) ... Setting up libfftw3-single3:ppc64el (3.3.8-2ubuntu6) ... Setting up libstruct-dumb-perl (0.12-1) ... Setting up libogg0:ppc64el (1.3.4-0ubuntu1) ... Setting up libmouse-perl (2.5.10-1build1) ... Setting up libpod-pom-perl (2.01-3) ... Setting up bsdextrautils (2.36-2ubuntu1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up hdf5-helpers (1.10.6+repack-2) ... Setting up libregexp-pattern-perl (0.2.14-1) ... Setting up libdata-messagepack-perl (1.00-2ubuntu1) ... Setting up libicu67:ppc64el (67.1-3ubuntu1) ... Setting up libdynaloader-functions-perl (0.003-1) ... Setting up libdatrie1:ppc64el (0.2.12-3) ... Setting up libtext-glob-perl (0.11-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.53-1) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libqhull8.0:ppc64el (2020.1-2) ... Setting up libsort-key-perl (1.33-2build2) ... Setting up libclone-perl (0.45-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:ppc64el (0.2.2-1) ... Setting up libsub-identify-perl (0.14-1build2) ... Setting up libglib2.0-0:ppc64el (2.64.4-1) ... No schema files found: doing nothing. Setting up libcpanel-json-xs-perl (4.19-1build1) ... Setting up libglvnd0:ppc64el (1.3.1-1ubuntu1) ... Setting up libio-stringy-perl (2.111-3) ... Setting up libhtml-tagset-perl (3.20-4) ... Setting up liblog-any-perl (1.708-1) ... Setting up libqscintilla2-qt5-l10n (2.11.2+dfsg-6) ... Setting up libdevel-size-perl (0.83-1build1) ... Setting up libdebhelper-perl (13.2ubuntu1) ... Setting up libbrotli1:ppc64el (1.0.7-7) ... Setting up libpod-constants-perl (0.19-2) ... Setting up libconvert-binhex-perl (1.125-1) ... Setting up libfuture-perl (0.45-1) ... Setting up liblwp-mediatypes-perl (6.04-1) ... Setting up libyaml-libyaml-perl (0.82+repack-1) ... Setting up fonts-freefont-otf (20120503-10) ... Setting up x11-common (1:7.7+19ubuntu14) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libtry-tiny-perl (0.30-1) ... Setting up libsensors-config (1:3.6.0-2ubuntu1) ... Setting up libnghttp2-14:ppc64el (1.41.0-2) ... Setting up libmagic1:ppc64el (1:5.38-5) ... Setting up perl-openssl-defaults:ppc64el (5) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up libfftw3-long3:ppc64el (3.3.8-2ubuntu6) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up libclone-choose-perl (0.010-1) ... Setting up xkb-data (2.29-2) ... Setting up libtime-moment-perl (0.44-1build3) ... Setting up libencode-locale-perl (1.05-1) ... Setting up libmetis5:ppc64el (5.1.0.dfsg-7) ... Setting up file (1:5.38-5) ... Setting up libreadline-dev:ppc64el (8.0-4) ... Setting up libconfig-tiny-perl (2.24-1) ... Setting up libsereal-encoder-perl (4.017+ds-1) ... Setting up libldap-common (2.4.50+dfsg-1ubuntu3) ... Setting up libyaml-perl (1.30-1) ... Setting up liblist-utilsby-perl (0.11-1) ... Setting up libyaml-tiny-perl (1.73-1) ... Setting up libpthread-stubs0-dev:ppc64el (0.4-1) ... Setting up libjbig0:ppc64el (2.1-3.1build1) ... Setting up octave-common (5.2.0-3build1) ... Setting up libregexp-common-perl (2017060201-1) ... Setting up libpcre2-16-0:ppc64el (10.34-7) ... Setting up libaec0:ppc64el (1.0.4-1) ... Setting up libopengl0:ppc64el (1.3.1-1ubuntu1) ... Setting up libsub-install-perl (0.928-1) ... Setting up libmetrics-any-perl (0.06-1) ... Setting up libflac8:ppc64el (1.3.3-1build1) ... Setting up libkrb5support0:ppc64el (1.17-10) ... Setting up libnumber-compare-perl (0.03-1) ... Setting up libsasl2-modules-db:ppc64el (2.1.27+dfsg-2) ... Setting up liberror-perl (0.17029-1) ... Setting up libasound2-data (1.2.2-2.3ubuntu1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004002-1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up libboolean-perl (0.46-1) ... Setting up xtrans-dev (1.4.0-1) ... Setting up autotools-dev (20180224.1) ... Setting up libblas3:ppc64el (3.9.0-2) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libalgorithm-c3-perl (0.10-1) ... Setting up libgles2:ppc64el (1.3.1-1ubuntu1) ... Setting up liblog-log4perl-perl (1.50-1) ... Setting up libtext-reform-perl (1.20-3) ... Setting up libfreetype6:ppc64el (2.10.2+dfsg-3) ... Setting up libx11-data (2:1.6.9-2ubuntu1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up librtmp1:ppc64el (2.4+20151223.gitfa8646d.1-2build2) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libio-tiecombine-perl (1.005-1) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up aglfn (1.7+git20191031.4036a9c-2) ... Setting up lzip (1.21-7) ... Setting up libavahi-common-data:ppc64el (0.8-3ubuntu1) ... Setting up libxml-writer-perl (0.625-1) ... Setting up libgles1:ppc64el (1.3.1-1ubuntu1) ... Setting up libhash-fieldhash-perl (0.15-1build2) ... Setting up libdbus-1-3:ppc64el (1.12.18-1ubuntu1) ... Setting up libsigsegv2:ppc64el (2.12-2build1) ... Setting up libfribidi0:ppc64el (1.0.8-2) ... Setting up t1utils (1.41-4) ... Setting up liblinux-epoll-perl (0.017-1) ... Setting up diffstat (1.63-1) ... Setting up libvorbis0a:ppc64el (1.3.6-2ubuntu2) ... Setting up libvariable-magic-perl (0.62-1build2) ... Setting up libio-html-perl (1.001-1) ... Setting up libtext-template-perl (1.59-1) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up libwebp6:ppc64el (0.6.1-2) ... Setting up libb-hooks-op-check-perl (0.22-1build2) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up ucf (3.0043) ... Setting up libsensors5:ppc64el (1:3.6.0-2ubuntu1) ... Setting up libk5crypto3:ppc64el (1.17-10) ... Setting up libjpeg-turbo8:ppc64el (2.0.3-0ubuntu2) ... Setting up libltdl7:ppc64el (2.4.6-14) ... Setting up libfftw3-double3:ppc64el (3.3.8-2ubuntu6) ... Setting up libglapi-mesa:ppc64el (20.1.4-1) ... Setting up libparams-util-perl (1.07-3build5) ... Setting up libsasl2-2:ppc64el (2.1.27+dfsg-2) ... Setting up libgfortran5:ppc64el (10.2.0-3ubuntu1) ... Setting up libmtdev1:ppc64el (1.1.6-1) ... Setting up libroken18-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl (3.5.8-1build1) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libarray-intspan-perl (2.004-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-1) ... Setting up libexporter-lite-perl (0.08-1) ... Setting up libsub-name-perl (0.26-1) ... Setting up zlib1g-dev:ppc64el (1:1.2.11.dfsg-2ubuntu1) ... Setting up libdata-validate-domain-perl (0.10-1) ... Setting up libparse-recdescent-perl (1.967015+dfsg-2) ... Setting up libxshmfence1:ppc64el (1.3-1) ... Setting up libpath-tiny-perl (0.114-1) ... Setting up libuchardet0:ppc64el (0.0.7-1) ... Setting up liblua5.3-0:ppc64el (5.3.3-1.1ubuntu2) ... Setting up libjson-perl (4.02000-2) ... Setting up libasound2:ppc64el (1.2.2-2.3ubuntu1) ... Setting up liblog-any-adapter-screen-perl (0.140-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libmd4c0:ppc64el (0.4.4-1) ... Setting up libmousex-strictconstructor-perl (0.02-2) ... Setting up libsub-uplevel-perl (0.2800-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libaliased-perl (0.34-1) ... Setting up libharfbuzz0b:ppc64el (2.6.4-1ubuntu5) ... Setting up libthai-data (0.1.28-3) ... Setting up libgfortran-10-dev:ppc64el (10.2.0-3ubuntu1) ... Setting up xorg-sgml-doctools (1:1.11-1) ... Setting up netbase (6.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3build5) ... Setting up libcxsparse3:ppc64el (1:5.8.1+dfsg-2) ... Setting up libtext-autoformat-perl (1.750000-1) ... Setting up libkrb5-3:ppc64el (1.17-10) ... Setting up libsort-versions-perl (1.62-1) ... Setting up libopengl-dev:ppc64el (1.3.1-1ubuntu1) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libre-engine-re2-perl (0.13-5build3) ... Setting up libtext-unidecode-perl (1.30-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libsamplerate0:ppc64el (0.1.9-2) ... Setting up libwebpmux3:ppc64el (0.6.1-2) ... Setting up libbsd0:ppc64el (0.10.0-1) ... Setting up libtext-levenshteinxs-perl (0.03-4build7) ... Setting up libperlio-gzip-perl (0.19-1build5) ... Setting up libdrm-common (2.4.102-1) ... Setting up libelf1:ppc64el (0.180-1) ... Setting up libevdev2:ppc64el (1.9.1+dfsg-1) ... Setting up libxml2:ppc64el (2.9.10+dfsg-5build1) ... Setting up libtext-levenshtein-damerau-perl (0.41-1) ... Setting up libsereal-decoder-perl (4.017+ds-1) ... Setting up libsuitesparseconfig5:ppc64el (1:5.8.1+dfsg-2) ... Setting up liburi-perl (1.76-2) ... Setting up libcarp-assert-perl (0.21-1) ... Setting up libgudev-1.0-0:ppc64el (1:233-1) ... Setting up libblas-dev:ppc64el (3.9.0-2) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so to provide /usr/lib/powerpc64le-linux-gnu/libblas.so (libblas.so-powerpc64le-linux-gnu) in auto mode Setting up libsz2:ppc64el (1.0.4-1) ... Setting up libvorbisenc2:ppc64el (1.3.6-2ubuntu2) ... Setting up libheimbase1-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libwacom-common (1.3-2ubuntu1) ... Setting up libmousex-nativetraits-perl (1.09-2) ... Setting up libemail-address-xs-perl (1.04-1build3) ... Setting up libxkbcommon0:ppc64el (0.10.0-1) ... Setting up libwayland-client0:ppc64el (1.18.0-1) ... Setting up libnet-ssleay-perl (1.88-2ubuntu1) ... Setting up libjpeg8:ppc64el (8c-2ubuntu8) ... Setting up x11proto-dev (2019.2-1ubuntu1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up gnuplot-data (5.2.8+dfsg1-2) ... Setting up libamd2:ppc64el (1:5.8.1+dfsg-2) ... Setting up libice6:ppc64el (2:1.0.10-0ubuntu1) ... Setting up libhttp-date-perl (6.05-1) ... Setting up libjpeg-turbo8-dev:ppc64el (2.0.3-0ubuntu2) ... Setting up libxdmcp6:ppc64el (1:1.1.3-0ubuntu1) ... Setting up liblapack3:ppc64el (3.9.0-2) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode Setting up libxcb1:ppc64el (1.14-2) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up libxcb-xfixes0:ppc64el (1.14-2) ... Setting up libfile-listing-perl (6.04-1) ... Setting up libxau-dev:ppc64el (1:1.0.9-0ubuntu1) ... Setting up libcolamd2:ppc64el (1:5.8.1+dfsg-2) ... Setting up libxcb-xinput0:ppc64el (1.14-2) ... Setting up libtool (2.4.6-14) ... Setting up libxcb-render0:ppc64el (1.14-2) ... Setting up libfftw3-bin (3.3.8-2ubuntu6) ... Setting up fontconfig-config (2.13.1-2ubuntu3) ... Setting up libobject-id-perl (0.1.2-2ubuntu1) ... Setting up liblist-moreutils-perl (0.416-1build5) ... Setting up libxcb-glx0:ppc64el (1.14-2) ... Setting up libasn1-8-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libedit2:ppc64el (3.1-20191231-1) ... Setting up libregexp-pattern-license-perl (3.4.0-1) ... Setting up libhash-merge-perl (0.301-1) ... Setting up libxcb-keysyms1:ppc64el (0.4.0-1build1) ... Setting up libaec-dev:ppc64el (1.0.4-1) ... Setting up libarpack2:ppc64el (3.7.0-3) ... Setting up libxcb-shape0:ppc64el (1.14-2) ... Setting up libavahi-common3:ppc64el (0.8-3ubuntu1) ... Setting up libtype-tiny-perl (1.010002-1) ... Setting up libnet-http-perl (6.19-1) ... Setting up libpath-iterator-rule-perl (1.014-1) ... Setting up m4 (1.4.18-4) ... Setting up libxcb-render-util0:ppc64el (0.3.9-1build1) ... Setting up libxcb-shm0:ppc64el (1.14-2) ... Setting up libexception-class-perl (1.44-1) ... Setting up libxcb-icccm4:ppc64el (0.4.1-1.1) ... Setting up libclass-c3-perl (0.34-1) ... Setting up libqrupdate1:ppc64el (1.1.2-4) ... Setting up libdevel-callchecker-perl (0.008-1ubuntu1) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libhcrypto4-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libtest-metrics-any-perl (0.01-2) ... Setting up libxcb-util1:ppc64el (0.4.0-0ubuntu3) ... Setting up libxcb-xkb1:ppc64el (1.14-2) ... Setting up libxcb-image0:ppc64el (0.4.0-1build1) ... Setting up libio-async-perl (0.77-3) ... Setting up libllvm10:ppc64el (1:10.0.1-1) ... Setting up libxcb-present0:ppc64el (1.14-2) ... Setting up tex-common (6.15) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libthai0:ppc64el (0.1.28-3) ... Setting up libcamd2:ppc64el (1:5.8.1+dfsg-2) ... Setting up libxdmcp-dev:ppc64el (1:1.1.3-0ubuntu1) ... Setting up libwind0-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libxcb-xinerama0:ppc64el (1.14-2) ... Setting up libtest-exception-perl (0.43-1) ... Setting up libglpk40:ppc64el (4.65-2) ... Setting up libstring-copyright-perl (0.003006-1) ... Setting up libxcb-sync1:ppc64el (1.14-2) ... Setting up x11proto-core-dev (2019.2-1ubuntu1) ... Setting up shared-mime-info (1.15-1) ... Setting up libxkbcommon-x11-0:ppc64el (0.10.0-1) ... Setting up liblapack-dev:ppc64el (3.9.0-2) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so (liblapack.so-powerpc64le-linux-gnu) in auto mode Setting up libgssapi-krb5-2:ppc64el (1.17-10) ... Setting up gfortran-10 (10.2.0-3ubuntu1) ... Setting up libdata-optlist-perl (0.110-1) ... Setting up libcroco3:ppc64el (0.6.13-1) ... Setting up libqt5core5a:ppc64el (5.14.2+dfsg-5) ... Setting up libssh-4:ppc64el (0.9.4-1ubuntu2) ... Setting up autoconf (2.69-11.1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxcb-dri2-0:ppc64el (1.14-2) ... Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libjack-jackd2-0:ppc64el (1.9.14-0ubuntu2) ... Setting up libdrm2:ppc64el (2.4.102-1) ... Setting up libhdf5-103-1:ppc64el (1.10.6+repack-2) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up libqt5dbus5:ppc64el (5.14.2+dfsg-5) ... Setting up libccolamd2:ppc64el (1:5.8.1+dfsg-2) ... Setting up libxcb-randr0:ppc64el (1.14-2) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up libhdf5-cpp-103-1:ppc64el (1.10.6+repack-2) ... Setting up libx11-6:ppc64el (2:1.6.9-2ubuntu1) ... Setting up libtiff5:ppc64el (4.1.0+git191117-2build1) ... Setting up libfontconfig1:ppc64el (2.13.1-2ubuntu3) ... Setting up libsndfile1:ppc64el (1.0.28-8) ... Setting up libmro-compat-perl (0.13-1) ... Setting up libjpeg8-dev:ppc64el (8c-2ubuntu8) ... Setting up libwacom2:ppc64el (1.3-2ubuntu1) ... Setting up libsm6:ppc64el (2:1.2.3-1) ... Setting up libfftw3-dev:ppc64el (3.3.8-2ubuntu6) ... Setting up libavahi-client3:ppc64el (0.8-3ubuntu1) ... Setting up libcholmod3:ppc64el (1:5.8.1+dfsg-2) ... Setting up libio-socket-ssl-perl (2.067-1) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libhttp-message-perl (6.25-1) ... Setting up libdrm-amdgpu1:ppc64el (2.4.102-1) ... Setting up libhdf5-hl-100:ppc64el (1.10.6+repack-2) ... Setting up automake (1:1.16.2-3ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libiterator-perl (0.03+ds1-1) ... Setting up libxcb-dri3-0:ppc64el (1.14-2) ... Setting up libportaudio2:ppc64el (19.6.0-1build1) ... Setting up libhttp-negotiate-perl (6.01-1) ... Setting up fontconfig (2.13.1-2ubuntu3) ... Regenerating fonts cache... done. Setting up libcarp-assert-more-perl (1.20-1) ... Setting up libdrm-nouveau2:ppc64el (2.4.102-1) ... Setting up gettext (0.19.8.1-10build1) ... Setting up libxdamage1:ppc64el (1:1.1.5-2) ... Setting up libxcb1-dev:ppc64el (1.14-2) ... Setting up libxpm4:ppc64el (1:3.5.12-1) ... Setting up libiterator-util-perl (0.02+ds1-1) ... Setting up libxrender1:ppc64el (1:0.9.10-1) ... Setting up libgbm1:ppc64el (20.1.4-1) ... Setting up libhttp-cookies-perl (6.08-1) ... Setting up libwmf0.2-7:ppc64el (0.2.8.4-17ubuntu1) ... Setting up libdrm-radeon1:ppc64el (2.4.102-1) ... Setting up libhx509-5-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up libparams-classify-perl (0.015-1build2) ... Setting up libpango-1.0-0:ppc64el (1.44.7-2ubuntu4) ... Setting up libgl1-mesa-dri:ppc64el (20.1.4-1) ... Setting up libjpeg-dev:ppc64el (8c-2ubuntu8) ... Setting up libx11-dev:ppc64el (2:1.6.9-2ubuntu1) ... Setting up libxext6:ppc64el (2:1.3.4-0ubuntu1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up gfortran (4:10.1.0-1ubuntu1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:ppc64el (1.16.0-4ubuntu1) ... Setting up libqt5network5:ppc64el (5.14.2+dfsg-5) ... Setting up libio-async-loop-epoll-perl (0.21-1) ... Setting up libxxf86vm1:ppc64el (1:1.1.4-1build1) ... Setting up libinput-bin (1.16.0-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libqt5sql5:ppc64el (5.14.2+dfsg-5) ... Setting up libqt5xml5:ppc64el (5.14.2+dfsg-5) ... Setting up libegl-mesa0:ppc64el (20.1.4-1) ... Setting up libhdf5-hl-cpp-100:ppc64el (1.10.6+repack-2) ... Setting up libumfpack5:ppc64el (1:5.8.1+dfsg-2) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmailtools-perl (2.21-1) ... Setting up libxfixes3:ppc64el (1:5.0.3-2) ... Setting up libconfig-model-perl (2.140-1) ... Setting up libxinerama1:ppc64el (2:1.1.4-2) ... Setting up libgd3:ppc64el (2.3.0-2) ... Setting up libhdf5-fortran-102:ppc64el (1.10.6+repack-2) ... Setting up libgraphicsmagick-q16-3 (1.4+really1.3.35+hg16297-1) ... Setting up texinfo (6.7.0.dfsg.2-5) ... Setting up libcups2:ppc64el (2.3.3-2) ... Setting up libdata-section-perl (0.200007-1) ... Setting up libegl1:ppc64el (1.3.1-1ubuntu1) ... Setting up libhdf5-hl-fortran-100:ppc64el (1.10.6+repack-2) ... Setting up libgraphicsmagick++-q16-12 (1.4+really1.3.35+hg16297-1) ... Setting up libpangoft2-1.0-0:ppc64el (1.44.7-2ubuntu4) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libstring-rewriteprefix-perl (0.008-1) ... Setting up libpangocairo-1.0-0:ppc64el (1.44.7-2ubuntu4) ... Setting up libkrb5-26-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libconfig-model-backend-yaml-perl (2.133-2) ... Setting up libinput10:ppc64el (1.16.0-1) ... Setting up libxft2:ppc64el (2.3.3-0ubuntu1) ... Setting up libglx-mesa0:ppc64el (20.1.4-1) ... Setting up libglx0:ppc64el (1.3.1-1ubuntu1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004000-1) ... Setting up po-debconf (1.0.21) ... Setting up libxcursor1:ppc64el (1:1.2.0-2) ... Setting up liblist-someutils-perl (0.58-1) ... Setting up libmime-tools-perl (5.509-1) ... Setting up libheimntlm0-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libsoftware-license-perl (0.103014-2) ... Setting up libclass-load-perl (0.25-1) ... Setting up libgl1:ppc64el (1.3.1-1ubuntu1) ... Setting up libgssapi3-heimdal:ppc64el (7.7.0+dfsg-2) ... Setting up libhdf5-dev (1.10.6+repack-2) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/powerpc64le-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libglx-dev:ppc64el (1.3.1-1ubuntu1) ... Setting up libglu1-mesa:ppc64el (9.0.1-1build1) ... Setting up gnuplot-nox (5.2.8+dfsg1-2) ... update-alternatives: using /usr/bin/gnuplot-nox to provide /usr/bin/gnuplot (gnuplot) in auto mode Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libparams-validate-perl (1.29-3) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libgl-dev:ppc64el (1.3.1-1ubuntu1) ... Setting up libegl-dev:ppc64el (1.3.1-1ubuntu1) ... Setting up libsoftware-licensemoreutils-perl (1.004-1) ... Setting up libfltk1.3:ppc64el (1.3.5-1) ... Setting up libfltk-gl1.3:ppc64el (1.3.5-1) ... Setting up libqt5gui5:ppc64el (5.14.2+dfsg-5) ... Setting up libldap-2.4-2:ppc64el (2.4.50+dfsg-1ubuntu3) ... Setting up libcurl3-gnutls:ppc64el (7.68.0-1ubuntu4) ... Setting up libqt5widgets5:ppc64el (5.14.2+dfsg-5) ... Setting up libqt5help5:ppc64el (5.14.2-2) ... Setting up libgl2ps1.4 (1.4.2+dfsg1-1) ... Setting up libqt5printsupport5:ppc64el (5.14.2+dfsg-5) ... Setting up liboctave7:ppc64el (5.2.0-3build1) ... Setting up dh-octave-autopkgtest (0.7.6) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up libgetopt-long-descriptive-perl (0.105-1) ... Setting up libgles-dev:ppc64el (1.3.1-1ubuntu1) ... Setting up libnamespace-autoclean-perl (0.29-1) ... Setting up libapp-cmd-perl (0.331-1) ... Setting up libglvnd-dev:ppc64el (1.3.1-1ubuntu1) ... Setting up libmoox-struct-perl (0.020-1) ... Setting up lintian (2.86.0) ... Setting up libqscintilla2-qt5-15 (2.11.2+dfsg-6) ... Setting up octave (5.2.0-3build1) ... Setting up cme (1.032-1) ... Setting up libgl1-mesa-dev:ppc64el (20.1.4-1) ... Setting up licensecheck (3.0.47-1) ... Setting up liboctave-dev (5.2.0-3build1) ... Setting up dh-autoreconf (19) ... Setting up liblwp-protocol-https-perl (6.09-1) ... Setting up libwww-perl (6.46-1) ... Setting up debhelper (13.2ubuntu1) ... Setting up libparse-debcontrol-perl (2.005-4) ... Setting up libconfig-model-dpkg-perl (2.138) ... Setting up dh-octave (0.7.6) ... Setting up sbuild-build-depends-octave-stk-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.31-2ubuntu1) ... Processing triggers for systemd (245.7-1ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-177-generic ppc64el (ppc64le) Toolchain package versions: binutils_2.35-1ubuntu1 dpkg-dev_1.20.5ubuntu1 g++-10_10.2.0-3ubuntu1 gcc-10_10.2.0-3ubuntu1 libc6-dev_2.31-2ubuntu1 libstdc++-10-dev_10.2.0-3ubuntu1 libstdc++6_10.2.0-3ubuntu1 linux-libc-dev_5.8.0-12.13 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 aglfn_1.7+git20191031.4036a9c-2 apt_2.1.7 autoconf_2.69-11.1 automake_1:1.16.2-3ubuntu1 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu10 base-passwd_3.5.47 bash_5.0-6ubuntu2 binutils_2.35-1ubuntu1 binutils-common_2.35-1ubuntu1 binutils-powerpc64le-linux-gnu_2.35-1ubuntu1 bsdextrautils_2.36-2ubuntu1 bsdutils_1:2.36-2ubuntu1 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 ca-certificates_20200601 cme_1.032-1 coreutils_8.32-3ubuntu1 cpp_4:10.1.0-1ubuntu1 cpp-10_10.2.0-3ubuntu1 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2ubuntu1 debianutils_4.11 dh-autoreconf_19 dh-octave_0.7.6 dh-octave-autopkgtest_0.7.6 dh-strip-nondeterminism_1.9.0-1 diffstat_1.63-1 diffutils_1:3.7-3build1 dpkg_1.20.5ubuntu1 dpkg-dev_1.20.5ubuntu1 dwz_0.13-5 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.24-1 file_1:5.38-5 findutils_4.7.0-1ubuntu1 fontconfig_2.13.1-2ubuntu3 fontconfig-config_2.13.1-2ubuntu3 fonts-dejavu-core_2.37-2 fonts-freefont-otf_20120503-10 g++_4:10.1.0-1ubuntu1 g++-10_10.2.0-3ubuntu1 gcc_4:10.1.0-1ubuntu1 gcc-10_10.2.0-3ubuntu1 gcc-10-base_10.2.0-3ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gfortran_4:10.1.0-1ubuntu1 gfortran-10_10.2.0-3ubuntu1 gnuplot-data_5.2.8+dfsg1-2 gnuplot-nox_5.2.8+dfsg1-2 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2ubuntu1 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sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-octave-stk-dummy_0.invalid.0 sed_4.7-1build1 sensible-utils_0.0.12+nmu1 shared-mime-info_1.15-1 systemd_245.7-1ubuntu1 systemd-sysv_245.7-1ubuntu1 systemd-timesyncd_245.7-1ubuntu1 sysvinit-utils_2.96-3ubuntu1 t1utils_1.41-4 tar_1.30+dfsg-7 tex-common_6.15 texinfo_6.7.0.dfsg.2-5 tzdata_2020a-0ubuntu1 ubuntu-keyring_2020.06.17.1 ucf_3.0043 util-linux_2.36-2ubuntu1 x11-common_1:7.7+19ubuntu14 x11proto-core-dev_2019.2-1ubuntu1 x11proto-dev_2019.2-1ubuntu1 xkb-data_2.29-2 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.4.0-1 xz-utils_5.2.4-1ubuntu1 zlib1g_1:1.2.11.dfsg-2ubuntu1 zlib1g-dev_1:1.2.11.dfsg-2ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon Aug 3 11:07:42 2020 UTC gpgv: using RSA key 3F464391498FE874BDB5D98F2124AA1983785C90 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./octave-stk_2.6.1-3.dsc dpkg-source: info: extracting octave-stk in octave-stk-2.6.1 dpkg-source: info: unpacking octave-stk_2.6.1.orig.tar.gz dpkg-source: info: unpacking octave-stk_2.6.1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0002-Remove-the-MOLE.patch dpkg-source: info: applying 0003-Mark-expected-failure.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-19765811 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-19765811 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-19765811 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package octave-stk dpkg-buildpackage: info: source version 2.6.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean --buildsystem=octave --with=octave dh_auto_clean -O--buildsystem=octave dh_octave_clean make[1]: Entering directory '/<>/src' rm -f *.o *.mex make[1]: Leaving directory '/<>/src' dh_autoreconf_clean -O--buildsystem=octave dh_clean -O--buildsystem=octave debian/rules binary-arch dh binary-arch --buildsystem=octave --with=octave dh_update_autotools_config -a -O--buildsystem=octave dh_autoreconf -a -O--buildsystem=octave dh_octave_version -a -O--buildsystem=octave Checking the Octave version... ok dh_auto_configure -a -O--buildsystem=octave dh_auto_build -a -O--buildsystem=octave dh_auto_test -a -O--buildsystem=octave create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=octave dh_prep -a -O--buildsystem=octave dh_auto_install -a -O--buildsystem=octave octave --no-gui --no-history --silent --no-init-file --no-window-system /usr/share/dh-octave/install-pkg.m warning: creating installation directory /<>/debian/octave-stk/usr/share/octave/packages warning: called from install at line 30 column 5 pkg at line 441 column 9 /usr/share/dh-octave/install-pkg.m at line 43 column 1 make[1]: Entering directory '/<>/src' /usr/bin/mkoctfile --verbose --mex --output __stk_dist_pairwise__.mex stk_dist_pairwise.c /usr/bin/mkoctfile --verbose --mex --output __get_column_number__.mex get_column_number.c /usr/bin/mkoctfile --verbose --mex --output __stk_dist_matrixy__.mex stk_dist_matrixy.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_dist_pairwise.c -o /tmp/oct-XY6NlR.o gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_dist_matrixy.c -o /tmp/oct-DJRbrY.o gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG get_column_number.c -o /tmp/oct-QP3MRU.o /usr/bin/mkoctfile --verbose --mex --output __stk_filldist_discr_mex__.mex stk_filldist_discr_mex.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_filldist_discr_mex.c -o /tmp/oct-Hxj67d.o g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_filldist_discr_mex__.mex /tmp/oct-Hxj67d.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_dist_matrixy__.mex /tmp/oct-DJRbrY.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __get_column_number__.mex /tmp/oct-QP3MRU.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro /usr/bin/mkoctfile --verbose --mex --output __stk_gpquadform_matrixy__.mex stk_gpquadform_matrixy.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_gpquadform_matrixy.c -o /tmp/oct-qneq9U.o g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_dist_pairwise__.mex /tmp/oct-XY6NlR.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro /usr/bin/mkoctfile --verbose --mex --output __stk_isdominated_mex__.mex stk_isdominated_mex.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_isdominated_mex.c -o /tmp/oct-U48ZTN.o /usr/bin/mkoctfile --verbose --mex --output __stk_mindist_mex__.mex stk_mindist_mex.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_mindist_mex.c -o /tmp/oct-EOenI8.o /usr/bin/mkoctfile --verbose --mex --output __stk_dist_matrixx__.mex stk_dist_matrixx.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_dist_matrixx.c -o /tmp/oct-ipgbcu.o g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_mindist_mex__.mex /tmp/oct-EOenI8.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_gpquadform_matrixy__.mex /tmp/oct-qneq9U.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro /usr/bin/mkoctfile --verbose --mex --output __stk_gpquadform_matrixx__.mex stk_gpquadform_matrixx.c /usr/bin/mkoctfile --verbose --mex --output __stk_gpquadform_pairwise__.mex stk_gpquadform_pairwise.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_gpquadform_pairwise.c -o /tmp/oct-JWAAyE.o gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_gpquadform_matrixx.c -o /tmp/oct-i4hsMC.o g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_dist_matrixx__.mex /tmp/oct-ipgbcu.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro /usr/bin/mkoctfile --verbose --mex --output __stk_paretofind_mex__.mex stk_paretofind_mex.c g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_isdominated_mex__.mex /tmp/oct-U48ZTN.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_paretofind_mex.c -o /tmp/oct-iL9lBy.o /usr/bin/mkoctfile --verbose --mex --output __stk_sampling_vdc_rr2__.mex stk_sampling_vdc_rr2.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_sampling_vdc_rr2.c -o /tmp/oct-fDNl7a.o g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_gpquadform_matrixx__.mex /tmp/oct-i4hsMC.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_gpquadform_pairwise__.mex /tmp/oct-JWAAyE.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro /usr/bin/mkoctfile --verbose --mex --output __stk_sampling_sobol_mex__.mex stk_sampling_sobol_mex.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_sampling_sobol_mex.c -o /tmp/oct-mkg2hg.o /usr/bin/mkoctfile --verbose --mex --output __stk_distrib_bivnorm0_cdf__.mex stk_distrib_bivnorm0_cdf.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_distrib_bivnorm0_cdf.c -o /tmp/oct-FQN4Gx.o g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_paretofind_mex__.mex /tmp/oct-iL9lBy.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_sampling_vdc_rr2__.mex /tmp/oct-fDNl7a.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro /usr/bin/mkoctfile --verbose --mex --output __stk_dominatedhv_mex__.mex stk_dominatedhv_mex.c wfg.c gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG stk_dominatedhv_mex.c -o /tmp/oct-fKKf2C.o g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_distrib_bivnorm0_cdf__.mex /tmp/oct-FQN4Gx.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_sampling_sobol_mex__.mex /tmp/oct-mkg2hg.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro gcc -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -DMEX_DEBUG wfg.c -o /tmp/oct-yFC8fB.o g++ -I/usr/include/octave-5.2.0/octave/.. -I/usr/include/octave-5.2.0/octave -pthread -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -shared -Wl,-Bsymbolic -Wl,-Bsymbolic-functions -Wl,-z,relro -o __stk_dominatedhv_mex__.mex /tmp/oct-fKKf2C.o /tmp/oct-yFC8fB.o -L/usr/lib/powerpc64le-linux-gnu -Wl,-Bsymbolic-functions -Wl,-z,relro make[1]: Leaving directory '/<>/src' copyfile /<>/./src/__get_column_number__.mex /<>/./src/__stk_dist_matrixx__.mex /<>/./src/__stk_dist_matrixy__.mex /<>/./src/__stk_dist_pairwise__.mex /<>/./src/__stk_distrib_bivnorm0_cdf__.mex /<>/./src/__stk_dominatedhv_mex__.mex /<>/./src/__stk_filldist_discr_mex__.mex /<>/./src/__stk_gpquadform_matrixx__.mex /<>/./src/__stk_gpquadform_matrixy__.mex /<>/./src/__stk_gpquadform_pairwise__.mex /<>/./src/__stk_isdominated_mex__.mex /<>/./src/__stk_mindist_mex__.mex /<>/./src/__stk_paretofind_mex__.mex /<>/./src/__stk_sampling_sobol_mex__.mex /<>/./src/__stk_sampling_vdc_rr2__.mex /<>/./inst/powerpc64le-unknown-linux-gnu-api-v53 For information about changes from previous versions of the stk package, run 'news stk'. chmod: cannot access 'debian/*/usr/lib/*/octave/packages/*/*/*.oct': No such file or directory dh_octave_check -a -O--buildsystem=octave Checking package... Checking m files ... [inst/examples/test_functions/stk_testcase_truss3.m] >>>>> /<>/inst/examples/test_functions/stk_testcase_truss3.m ***** shared tc, xd, n tc = stk_testcase_truss3 (); n = 5; xd = stk_sampling_randunif (n, [], tc.search_domain); ***** test v = stk_testfun_truss3_vol (xd, tc.constants); z = stk_testfun_truss3_bb (xd, tc.constants); assert (isequal (size (v), [n 1])); assert (isequal (size (z), [n 5])); ***** test F = stk_dataframe (zeros (n, 2), {'F1' 'F2'}); F(:, 1) = tc.constants.F1_mean + tc.constants.F1_std * randn (n, 1); F(:, 2) = tc.constants.F2_mean + tc.constants.F2_std * randn (n, 1); x = [xd F]; v = stk_testfun_truss3_vol (x, tc.constants); z = stk_testfun_truss3_bb (x, tc.constants); assert (isequal (size (v), [n 1])); assert (isequal (size (z), [n 5])); 2 tests, 2 passed, 0 known failure, 0 skipped [inst/examples/test_functions/stk_testfun_goldsteinprice.m] >>>>> /<>/inst/examples/test_functions/stk_testfun_goldsteinprice.m ***** test % Use with nargin == 0 for visualisation stk_testfun_goldsteinprice (); close all; ***** assert (stk_isequal_tolabs ... (stk_testfun_goldsteinprice ([0, -1]), 3.0, 1e-12)) 2 tests, 2 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb05.m] >>>>> /<>/inst/examples/01_kriging_basics/stk_example_kb05.m ***** test stk_example_kb05; close all; #========================# # stk_example_kb05 # #========================# 'stk_example_kb05' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/01_kriging_basics/stk_example_kb05.m STK_EXAMPLE_KB05 Generation of conditioned sample paths A Matern Gaussian process model is used, with constant but unknown mean (ordinary kriging) and known covariance parameters. Given noiseless observations from the unknown function, a batch of conditioned sample paths is drawn using the "conditioning by kriging" technique. In short, this means that unconditioned sample path are simulated first (using stk_generate_samplepaths), and then conditioned on the observations by kriging (using stk_conditioning). Note: in this example, for pedagogical purposes, conditioned samplepaths are simulated in two steps: first, unconditioned samplepaths are simulated; second, conditioned samplepaths are obtained using conditioning by kriging. In practice, these two steps can be carried out all at once using stk_generate_samplepath (see, e.g., stk_example_kb09). See also: stk_generate_samplepaths, stk_conditioning, stk_example_kb09 Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb01.m] >>>>> /<>/inst/examples/01_kriging_basics/stk_example_kb01.m ***** test stk_example_kb01; close all; #========================# # stk_example_kb01 # #========================# 'stk_example_kb01' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/01_kriging_basics/stk_example_kb01.m STK_EXAMPLE_KB01 Ordinary kriging in 1D, with noiseless data This example shows how to compute ordinary kriging predictions on a one-dimensional noiseless dataset. The word 'ordinary' indicates that the mean function of the GP prior is assumed to be constant and unknown. A Matern covariance function is used for the Gaussian Process (GP) prior. The parameters of this covariance function are assumed to be known (i.e., no parameter estimation is performed here). Note that the kriging predictor, which is the posterior mean of the GP, interpolates the data in this noiseless example. See also: stk_example_kb01n, stk_example_kb02 Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. model = scalar structure containing the fields: covariance_type = @stk_materncov_iso lm = dim = 1 param = -0.69315 1.38629 0.91629 lognoisevariance = -Inf True function and observed data 1.5 |-+ | ****G** +--------------------+ | *** **** |***?***True function| 1 |-+ *** *** +---G---Observations-+ | ** ** | ** ** 0.5 |-+ ** ** *****G | *G ** *** *** 0 |** ** G* *** |* ** *** *** | ** ** ** -0.5 |-+ ** ** * | ** ** | *G ** -1 |-+ *** ** | ******* | + + + + -1.5 |------------------------------------------------------------------ -1 -0.5 0 0.5 1 input variable x 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb09.m] >>>>> /<>/inst/examples/01_kriging_basics/stk_example_kb09.m ***** test stk_example_kb09; close all; #========================# # stk_example_kb09 # #========================# 'stk_example_kb09' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/01_kriging_basics/stk_example_kb09.m STK_EXAMPLE_KB09 Generation of sample paths conditioned on noisy observations A Matern Gaussian process model is used, with constant but unknown mean (ordinary kriging) and known covariance parameters. Given noisy observations from the unknown function, a batch of conditioned sample paths is drawn using the "conditioning by kriging" technique (stk_generate_samplepaths function). See also: stk_generate_samplepaths, stk_conditioning, stk_example_kb05 Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb02.m] >>>>> /<>/inst/examples/01_kriging_basics/stk_example_kb02.m ***** test stk_example_kb02; close all; #========================# # stk_example_kb02 # #========================# 'stk_example_kb02' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/01_kriging_basics/stk_example_kb02.m STK_EXAMPLE_KB02 Ordinary kriging in 1D with parameter estimation This example shows how to estimate covariance parameters and compute ordinary kriging predictions on a one-dimensional noiseless dataset. The model and data are the same as in stk_example_kb01, but this time the parameters of the covariance function are estimated using the Restricted Maximum Likelihood (ReML) method. See also: stk_example_kb01, stk_example_kb02n Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. model = scalar structure containing the fields: covariance_type = @stk_materncov_iso lm = dim = 1 param = -0.21078 2.30259 0.75619 lognoisevariance = -Inf True function and observed data 1.5 |-+ | ***G* +--------------------+ | *** *** |***?***True function| 1 |-+ ** *** +---G---Observations-+ | ** *** | ** ** 0.5 |-+ ** ** *** | G* ** **** *G** | ** ** G** *** F1 0 |*+ ** ** *** | ** ** ** | ** ** ** -0.5 |-+ ** ** | ** * | *G* ** -1 |-+ ** ** | ****** | + + + + -1.5 |------------------------------------------------------------------ -1 -0.5 0 0.5 1 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb02n.m] >>>>> /<>/inst/examples/01_kriging_basics/stk_example_kb02n.m ***** test stk_example_kb02n; close all; #=========================# # stk_example_kb02n # #=========================# 'stk_example_kb02n' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/01_kriging_basics/stk_example_kb02n.m STK_EXAMPLE_KB02N Noisy ordinary kriging in 1D with parameter estimation This example shows how to estimate covariance parameters and compute ordinary kriging predictions on a one-dimensional noisy dataset. The model and data are the same as in stk_example_kb02, but this time the parameters of the covariance function and the variance of the noise are jointly estimated using the Restricted Maximum Likelihood (ReML) method. See also: stk_example_kb01n, stk_example_kb02 Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. model = scalar structure containing the fields: covariance_type = @stk_materncov_iso lm = dim = 1 param = -0.098610 2.302585 0.613435 lognoisevariance = -3.0915 True noise variance = 0.0400 Estimated noise variance = 0.0454 True function and noisy observed data 1.5 |-+ | G ***** +--------------------+ | *** G G** |***?***True function| 1 |-+ G** **G +---G---Observations-+ | ** *** | ** ** 0.5 |-+ ** G* G *** | ** ** **** G**G* G | *G ** *** *** F1 0 |*+ ** ** *** | ** **G **G | **G ** ** -0.5 |-+ G ** ** | ** *G | ***G ** -1 |-+ ** *G | ***G** | + + + + -1.5 |------------------------------------------------------------------ -1 -0.5 0 0.5 1 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb06.m] >>>>> /<>/inst/examples/01_kriging_basics/stk_example_kb06.m ***** test stk_example_kb06; close all; #========================# # stk_example_kb06 # #========================# 'stk_example_kb06' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/01_kriging_basics/stk_example_kb06.m STK_EXAMPLE_KB06 Ordinary kriging VS kriging with a linear trend The same dataset is analyzed using two variants of kriging. The left panel shows the result of ordinary kriging, in other words, Gaussian process interpolation assuming a constant (but unknown) mean. The right panel shows the result of adding a linear trend in the mean of the Gaussian process. The difference with the left plot is clear in extrapolation: the first predic- tor exhibits a "mean reverting" behaviour, while the second one captures an increasing trend in the data. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb03.m] >>>>> /<>/inst/examples/01_kriging_basics/stk_example_kb03.m ***** test stk_example_kb03; close all; #========================# # stk_example_kb03 # #========================# 'stk_example_kb03' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/01_kriging_basics/stk_example_kb03.m STK_EXAMPLE_KB03 Ordinary kriging in 2D An anisotropic Matern covariance function is used for the Gaussian Process (GP) prior. The parameters of this covariance function (variance, regularity and ranges) are estimated using the Restricted Maximum Likelihood (ReML) method. The mean function of the GP prior is assumed to be constant and unknown. This default choice can be overridden by means of the model.lm property. The function is sampled on a space-filling Latin Hypercube design, and the data is assumed to be noiseless. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. BOX = 2-dimensional hyper-rectangle (stk_hrect object): : x_1 x_2 lower_bounds : -5 0 upper_bounds : 10 15 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb01n.m] >>>>> /<>/inst/examples/01_kriging_basics/stk_example_kb01n.m ***** test stk_example_kb01n; close all; #=========================# # stk_example_kb01n # #=========================# 'stk_example_kb01n' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/01_kriging_basics/stk_example_kb01n.m STK_EXAMPLE_KB01N Ordinary kriging in 1D, with noisy data This example shows how to compute ordinary kriging predictions on a one-dimensional noisy dataset. The Gaussian Process (GP) prior is the same as in stk_example_kb01. The observation noise is Gaussian and homoscedastic (constant variance). Its variance is assumed to be known. Note that the kriging predictor, which is the posterior mean of the GP, does NOT interpolate the data in this noisy example. See also: stk_example_kb01, stk_example_kb02n Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. model = scalar structure containing the fields: covariance_type = @stk_materncov_iso lm = dim = 1 param = -0.69315 1.38629 0.91629 lognoisevariance = -3.2189 True function and observed data 1.5 |-+ | G******* +--------------------+ | *** G G*** |***?***True function| 1 |-+ G** *G* +---G---Observations-+ | ** ** | ** *G G 0.5 |-+ ** ** ******G G | *G ** *** G *** 0 |** ** ** *** |* ** **G *** | ** ** *G -0.5 |-+ G *G ** * | ** *G | ** G ** -1 |-+ *** *G | ***G*** | + + + + -1.5 |------------------------------------------------------------------ -1 -0.5 0 0.5 1 input variable x 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb08.m] >>>>> /<>/inst/examples/01_kriging_basics/stk_example_kb08.m ***** test stk_example_kb08; close all; #========================# # stk_example_kb08 # #========================# 'stk_example_kb08' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/01_kriging_basics/stk_example_kb08.m STK_EXAMPLE_KB08 Generation of conditioned sample paths made easy It has been demonstrated, in stk_example_kb05, how to generate conditioned sample paths using unconditioned sample paths and conditioning by kriging. This example shows how to do the same in a more concise way, letting STK take care of the details. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/01_kriging_basics/stk_example_kb07.m] >>>>> /<>/inst/examples/01_kriging_basics/stk_example_kb07.m ***** test stk_example_kb07; close all; #========================# # stk_example_kb07 # #========================# 'stk_example_kb07' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/01_kriging_basics/stk_example_kb07.m STK_EXAMPLE_KB07 Simulation of sample paths from a Matern process Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/02_design_of_experiments/stk_example_doe04.m] >>>>> /<>/inst/examples/02_design_of_experiments/stk_example_doe04.m ***** test stk_example_doe04; close all; #=========================# # stk_example_doe04 # #=========================# 'stk_example_doe04' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/02_design_of_experiments/stk_example_doe04.m STK_EXAMPLE_DOE04 Probability of misclassification The upper panel shows posterior means and variances as usual, and the threshold of interest, which is at T = 0.85 (dashed line). The lower panel shows the probability of misclassification as a function of x (blue curve), i.e., the probability that the actual value of the function is not on the same side of the threshold as the prediction (posterior mean). We also plot the expected future probability of misclassification (magenta curve), should a new evaluation be made at x = 3. Note that both probabilities are obtained using stk_pmisclass. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/02_design_of_experiments/stk_example_doe03.m] >>>>> /<>/inst/examples/02_design_of_experiments/stk_example_doe03.m ***** test stk_example_doe03; close all; #=========================# # stk_example_doe03 # #=========================# 'stk_example_doe03' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/02_design_of_experiments/stk_example_doe03.m STK_EXAMPLE_DOE03 A simple illustration of 1D Bayesian optimization Our goal here is to optimize (maximize) the one-dimensional function x |--> x * sin (x) over the interval [0; 4 * pi]. A Matern 5/2 prior with known parameters is used. Evaluations points are chosen sequentially using the Expected Improvement (EI) criterion, starting from an initial design of N0 = 3 points. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 15 |-+ 10 |-+ ####%%%%%%%%%%%##### ################ 5 |-+%&&&&&&&&&&&&&&&&&&&&&&%# #%===========&&&&&%%%## 0 |-+*====F========XXXXXXXX&&&&& ====&XXXXXXXXX===XX&&&&&&%% z |&&***************************G***********************XX&&&& -5 |-+&&&&&&XXXXXXXXXXXXXX====&&# #&&&&&&XXXXXXXXXXXX===*******G -10 |-+ ##%%&&&&&&&&&&&&&&&&%%# ##%%&&&&&&&&&&&&&&&=======# -15 |-+ ##+####%%###+### + ###+%%%%%%%%%+%%%%## + -20 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 1 |-----------------------------------------------------------| | ***F******** + + + + | 0.8 |-+ ** ****** +-| 0.6 |-+* *** *********** +-| EI | * ** *** *** | 0.4 |** ** ** *** +-| 0.2 |*+ ** ** ** +-| |* + + ** + ** + + ** | 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 15 |-+ 10 |-+ ##%%%%%%%%#### #####%%%%%%###### 5 |-+%&&&% %&&&&&&&&&&&&&&&%# #%===========&&&&&&%%%# 0 |-+*****G******F*XXXXXXXX&&&&& ====&XXXXXXXXX===XXX&&&&&&% z |&&&&&&& #&&&&XX**************G************************X&&&& -5 |-+ #%&&&&&&&&&&====&&# #&&&&&&XXXXXXXXXXXX===X******G -10 |-+ #%%%%%%%%%%%# #%%&&&&&&&&&&&&&&&=======# -15 |-+ + ##+## + ###+###%%%%%%+%%%### + -20 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.7 |-----------------------------------------------------------| 0.6 |-+ + *** ****+ + + + +-| 0.5 |-+ ** *** +-| 0.4 |-+ *** ** ** *** +-| EI | ** ** * ** **** ***** | 0.3 |-+* **** ** ** ** +-| 0.2 |-** ** ** ** ** +-| 0.1 |-* **+ + ** + *** + +**** +-| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 15 |-+ 10 |-+ #### #####%%%%%%###### 5 |-+%%%%# #### #%&&&&&&&%# #%=======F===&&&&&&%%%# 0 |-+*****G******G***&XXXXX&&&&& ====&XXXXXXXXX===XXX&&&&&&% z |&&&&&&& %&&&&&==************G************************X&&&& -5 |-+ #%&&&&====&&# #&&&&&&XXXXXXXXXXXX===X******G -10 |-+ ####### #%%&&&&&&&&&&&&&&&=======# -15 |-+ + + + ###+####%%%%%+%%%### + -20 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.5 |-----------------------------------------------------------| | + + + + + | 0.4 |-+ *** ****F**** +-| 0.3 |-+ * ** * **** ** *** +-| EI | * * *** ** ** ** *** | 0.2 |-+* **** * ** ** ** ** +-| 0.1 |-** ** * ** ** ** ** +-| | * **+ * * + ** + ** + + *** | 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 15 |-+ ### 10 |-+ #%%%%%# #%&&&&%%%## | #### #%%%%%%## #&&===***G***XX&&&&&%%# 5 |-+&&&&&&&&&&&&#&&&&&&&&&&&&% #&==*****&&%&=F****XX&&&&%# z 0 |-+*****G******G***********&&*G*****X&&&% #&===X****X&&&% -5 |-+&&&% ### %&========****=&&&&&&%% #%===XX******&% | %%&&&&&&&&% #### #%===&&&&&**G -10 |-+ + +###### + + +#%====== + -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.35 |-----------------------------------------------------------| 0.3 |-+ + + + + *** + +-| 0.25 |-+ *** ** ** +-| 0.2 |-+ * * * ** +-| EI | * *** * | 0.15 |-+ ** ** ** +-| 0.1 |-+ * ** ** +-| 0.05 |-+ + + + ** + * *** +-| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 15 |-+ 10 |-+ #%&&&&% | #### #%%%%%%## %&&==**F*G*= ####### 5 |-+&&&&&&&&&&&& &&&&&&&&&&&%% #&=****&&&% &*G*&&&&&&&%%# z 0 |-+*****G******G*********XX&&&G****&&&&# *****XXX&&&&# -5 |-+&&&% ### %&======******=&&&&&%# %===*******&&% | %%&&&&&&&&% #%===&XXX***G -10 |-+ + +##%### + + +%%======#+ -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.7 |-----------------------------------------------------------| 0.6 |-+ + + + *** + +-| 0.5 |-+ * * +-| 0.4 |-+ * * +-| EI | * * | 0.3 |-+ * * +-| 0.2 |-+ ** * +-| 0.1 |-+ + + + ** + * + +-| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 10 |-+ ##%&&& | #### #%%%%%%## %&&=**FG*G** ####### 5 |-+&&&&&&&&&&&% %&&&&&&&&&&%# #&=***&& %*G*&&&&&&&%%# 0 |-+*****G******G*****XXXXX&&&&%****&&% ****XXX&&&&%# z |&&&&&&# #%%%##&===**********G*&&&%# &==*****X&&&% -5 |-+## %&&&&======&& %===XX******G -10 |-+ ##%%&&&&%%# #%====&&==== | + +###### + + +##%====# + -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.05 |-----------------------------------------------------------| | + + + *F+ + | 0.04 |-+ *** +-| 0.03 |-+ * * +-| EI | * ** | 0.02 |-+ ** ** +-| 0.01 |-+ * ** +-| | + + + ** ** + | 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 10 |-+ | #### #%%%%%%## %&&***GF*G** ####### 5 |-+&&&&&&&&&&&% %&&&&&&&&&&%# &=***& #*G*&&&&&&&%%# 0 |-+*****G******G*****XXXXX&&&&%****&# ****XXX&&&&%# z |&&&&&&# #%%%##&===**********G*&&% &=******X&&&% -5 |-+## %&&&&======&& %===XX******G -10 |-+ #%%&&&&&&%# #%====&&==== | + +###### + + +#%%====# + -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.025 |-----------------------------------------------------------| | + + + F + | 0.02 |-+ * +-| 0.015 |-+ * +-| EI | ** | 0.01 |-+ ** +-| 0.005 |-+ ** +-| | + + + *** + | 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 10 |-+ | #### #%%%%%%## #&&***GF*G** ####### 5 |-+&&&&&&&&&&&% %&&&&&&&&&%%# &=***& #*G*&&&&&&&%%# 0 |-+*****G******G*****XXXXX&&&&%***&&# ****XXX&&&&%# z |&&&&&&# #%%%##&===**********G*&&% &=******X&&&% -5 |-+## %&&&&======&& %===XX******G -10 |-+ #%%&&&&&&%# #%====&&==== | + +###### + + +#%%====# + -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.006 |-----------------------------------------------------------| 0.005 |-+ + + + F + +-| | * | 0.004 |-+ * +-| EI 0.003 |-+ * +-| 0.002 |-+ * +-| | * | 0.001 |-+ + **** + * + +-| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 10 |-+ | #### #%%%%%%## #&&***GG*G** ####### 5 |-+&&&&&&&&&&&% %&&&&&&&&&%%# &=***& #*G*&&&&&&&%%# 0 |-+*****G******G*****XXXXX&&&&%***&& ****XXX&&&&%# z |&&&&&&# #%%%##&===**F*******G*&&# &=******X&&&% -5 |-+## %&&&&======&& %===XX******G -10 |-+ #%%&&&&&&%# #%====&&==== | + +###### + + +#%%====# + -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.0006 |-----------------------------------------------------------| 0.0005 |-+ + +*F + + + +-| | *** | 0.0004 |-+ * * +-| 0.0003 |-+ * * +-| 0.0002 |-+ * ** +-| | ** * | 0.0001 |-+ + *+ ** + *** + +** +-| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 10 |-+ | #### #&&F**GG*G** ####### 5 |-+&&&&&&&&&&&& # &****& #*G*&&&&&&&%%# 0 |-+*****G******G**&&% #%%%%%&***&& ****XXX&&&&%# z |&&&&&&% #### #&*****G&&&****G*&%# &=******X&&&% -5 |-+## #&&&&*****=&& %===XX******G -10 |-+ #%%%%# #%====&&==== | + + + + +#%%====# + -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.00014 |-----------------------------------------------------------| 0.00012 |-+ + + + F + + +-| 0.0001 |-+ ** +-| 8e-05 |-+ ** +-| | * * | 6e-05 |-+ * * +-| 4e-05 |-+ * * *** +-| 2e-05 |-+ + + + * * * * ** +-| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 : x z x0(001) : 0.00000 0.00000 x0(002) : 6.00000 -1.67649 x0(003) : 12.00000 -6.43888 xg(057) : 1.68421 1.67339 xg(099) : 2.94737 0.56886 xg(282) : 8.45113 6.98861 xg(299) : 8.96241 3.99788 xg(268) : 8.03008 7.90589 xg(258) : 7.72932 7.66935 xg(265) : 7.93985 7.91060 xg(266) : 7.96992 7.91642 xg(145) : 4.33083 -4.01937 Number of evaluations: 3 + 9 = 12. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/02_design_of_experiments/stk_example_doe01.m] >>>>> /<>/inst/examples/02_design_of_experiments/stk_example_doe01.m ***** test stk_example_doe01; close all; #=========================# # stk_example_doe01 # #=========================# 'stk_example_doe01' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/02_design_of_experiments/stk_example_doe01.m STK_EXAMPLE_DOE01 Examples of two-dimensional designs All designs are constructed on the hyper-rectangle BOX = [0; 2] x [0; 4]. Examples of the following designs are shown: a) Regular grid --> stk_sampling_regulargrid, b) "Maximin" latin hypercube sample --> stk_sampling_maximinlhs, c) RR2-scrambled Halton sequence --> stk_sampling_halton_rr2, d) Uniformly distributed random sample --> stk_sampling_randunif. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/02_design_of_experiments/stk_example_doe02.m] >>>>> /<>/inst/examples/02_design_of_experiments/stk_example_doe02.m ***** test stk_example_doe02; close all; #=========================# # stk_example_doe02 # #=========================# 'stk_example_doe02' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/02_design_of_experiments/stk_example_doe02.m STK_EXAMPLE_DOE02 "Sequential Maximin" design In this example, a two-dimensional space-filling design is progressively enriched with new points using a "sequential maximin" approach. More precisely, the k-th point X(k, :) is selected to maximize the distance to the set of all previously selected points X(1, :), X(2, :), ..., X(k-1, :). NOTES: * The resulting design is NOT optimal with respect to the maximin criterion (separation distance). * This procedure is not truly a *sequential* design procedure, since the choice of the k-th point X(k, :) does NOT depend on the response at the previously selected locations X(i, :), i < k. REFERENCE [1] Emmanuel Vazquez and Julien Bect, "Sequential search based on kriging: convergence analysis of some algorithms", In: ISI - 58th World Statistics Congress of the International Statistical Institute (ISI'11), Dublin, Ireland, August 21-26, 2011. Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. n = 10, fd = 4.80e-01 1 |---------------------------------------------------------------------| | + F + + + | | F | 0.8 |-+ +-| | | | F | | F | 0.6 |-+ F +-| | | | F | 0.4 |-+ +-| | | | F | |F | 0.2 |-+ F +-| | | | F + + + + | 0 |---------------------------------------------------------------------| 0 0.2 0.4 0.6 0.8 1 n = 11, fd = 3.21e-01 1 |---------------------------------------------------------------------| | + F + + + | | F | 0.8 |-+ +-| | | | F | | F | 0.6 |-+ F +-| | | | F | 0.4 |-+ +-| | | | F | |F | 0.2 |-+ F +-| | | | F + + + + | 0 |---------------------------------------------------------------------| 0 0.2 0.4 0.6 0.8 1 n = 12, fd = 3.03e-01 1 |---------------------------------------------------------------------| | + F + + + | | F | 0.8 |-+ +-| | | | F | | F | 0.6 |-+ F +-| | | | F | 0.4 |-+ +-| | | | F | |F | 0.2 |-+ F +-| | | | F + + + + | 0 |---------------------------------------------------------------------| 0 0.2 0.4 0.6 0.8 1 n = 13, fd = 2.83e-01 1 |---------------------------------------------------------------------| | + F + + + | | F | 0.8 |-+ +-| | | | F | | F | 0.6 |-+ F +-| | | | F | 0.4 |-+ +-| | | | F | |F | 0.2 |-+ F +-| | | | F + + + + | 0 |---------------------------------------------------------------------| 0 0.2 0.4 0.6 0.8 1 n = 14, fd = 2.78e-01 1 |---------------------------------------------------------------------| | + F + + + | | F | 0.8 |-+ +-| | | | F | | F | 0.6 |-+ F +-| | | | F | 0.4 |-+ +-| | F | | F | |F | 0.2 |-+ F +-| | | | F + + + + | 0 |---------------------------------------------------------------------| 0 0.2 0.4 0.6 0.8 1 n = 15, fd = 2.54e-01 1 |---------------------------------------------------------------------| | + F + + + | | F | 0.8 |-+ +-| | | | F | | F | 0.6 |-+ F +-| | F | | F | 0.4 |-+ +-| | F | | F | |F | 0.2 |-+ F +-| | | | F + + + + | 0 |---------------------------------------------------------------------| 0 0.2 0.4 0.6 0.8 1 n = 16, fd = 2.54e-01 1 |---------------------------------------------------------------------| | + F + + + | | F | 0.8 |-+ +-| | | | F | | F | 0.6 |-+ F +-| | F | | F | 0.4 |-+ +-| | F | | F | |F | 0.2 |-+ F F +-| | | | F + + + + | 0 |---------------------------------------------------------------------| 0 0.2 0.4 0.6 0.8 1 n = 17, fd = 2.48e-01 1 |---------------------------------------------------------------------| | + F + + + | | F | 0.8 |-+ +-| | | | F | | F | 0.6 |-+ F +-| | F | | F | 0.4 |-+ +-| | F | | F | |F | 0.2 |-+ F F +-| | | | F + + + + | 0 |---------------------------------------------------------------------| 0 0.2 0.4 0.6 0.8 1 n = 18, fd = 2.42e-01 1 |---------------------------------------------------------------------| | + F + + + | | F | 0.8 |-+ +-| | | | F | | F | 0.6 |-+ F +-| | F | | F | 0.4 |-+ +-| | F | | F | |F | 0.2 |-+ F F +-| | | | F + + + + | 0 |---------------------------------------------------------------------| 0 0.2 0.4 0.6 0.8 1 n = 19, fd = 2.31e-01 1 |---------------------------------------------------------------------| | + F + + + | | F | 0.8 |-+ +-| | F | | F | | F | 0.6 |-+ F +-| | F | | F | 0.4 |-+ +-| | F | | F | |F | 0.2 |-+ F F +-| | | | F + + + + | 0 |---------------------------------------------------------------------| 0 0.2 0.4 0.6 0.8 1 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/02_design_of_experiments/stk_example_doe05.m] >>>>> /<>/inst/examples/02_design_of_experiments/stk_example_doe05.m ***** test stk_example_doe05; close all; #=========================# # stk_example_doe05 # #=========================# 'stk_example_doe05' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/02_design_of_experiments/stk_example_doe05.m STK_EXAMPLE_DOE05 A simple illustration of 1D Bayesian optimization Our goal here is to minimize the one-dimensional function x |--> x * sin (x) over the interval [0; 4 * pi], using noisy evaluations. Evaluations points are chosen sequentially using either AKG criterion (default) or the EQI criterion (set SAMPCRIT_NAME to 'EQI'); Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 15 |-+ 10 |-+ #####%############ | ##%%%%%%%%%####%%%%%%%### #%%========&G&&&&&&&&&%## 5 |-+&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&====X***************X&&&&&&% z 0 |-+************G***********************X&&&&&&===&&X********& -5 |-+&&&&&&&&&&&&&&&============G&&&&&&&&&&%%# ##===&&&&&&&&*G |%%%%%%%%%%%## ###%%%&&&&&&%%%%%%%%%### ===%%%%%=== -10 |-+ + + ### + + + ====== + -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.7 |-----------------------------------------------------------| 0.6 |-+ + + **F** + + + +-| 0.5 |-+ ** ** +-| 0.4 |-+**** ** *** **| AKG |*** ** * *** *** | 0.3 |-+ ** ** *** ** +-| 0.2 |-+ ** ** ** *** +-| 0.1 |-+ + ******* + + ***+ **** +-| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 15 |-+ 10 |-+ ###%%%%## | ###%%%%########## #%%========&G&%## 5 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0.04 |-----------------------------------------------------------| | + + + + + * ** | 0.03 |-+ ** *+*| | * * * *| AKG0.02 |-+ * * *+*| | * * * *| 0.01 |-+ * *** +*| | + + + **** + +* *** | 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 20 |-+ 15 |-+ ###%%%## 10 |-+ ##### ##### ##%&&&&&&&&&%# 5 |-+%%%&&&&&&&&&%&&&&&&&&%# #%&&======****G&&&# z |&&=**G********G***XXXX&&&&&&&&&===******XX&&****&% 0 |-+**&&&&&&&&&&===********G***G*****XXX&&&&&%%&=***&% G -5 |-+%%##%%%%%%%%#%&&&&&======&&&&&&&&&&&&%%# #%=**GG&&&&G*G -10 |-+ + ##+#### +##%%%%%##+ +%GG*GG*G=+ -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.025 |-----------------------------------------------------------| | + + + + + F * * | 0.02 |-+ * ** **-| 0.015 |-+ * ** **-| AKG | * ***** | 0.01 |-+ * ****+*| 0.005 |-+ * ***+*| | + + + **** + + * * *| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 20 |-+ ## 15 |-+ ##%%%%%%# 10 |-+ ###### 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|-----------------------------------------------------------| 0 2 4 6 8 10 12 20 |-+ #### 15 |-+ ##%%%%%%# 10 |-+ ##%%## ####### #%%&&&&&&&&&&%# 5 |-+%%%&&&&&&&&&%&&&&&&&&%# #%&&=====*****G&&&# z |&&=**G********G***XXXXX&&&&&&&&===******XX&&=***&% 0 |-+**&&&&&XX&&&===********G***G*****XXXX&&&&%%&=***&# G -5 |-+&%%#%%&&&&%%%%&&&&&======&&&&&&&&&&&&&%# #&=**GG#G G*G -10 |-+ + ##%+%%%# +#%%%%%%%%+ #+&GG*GGGG=+ -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.05 |-----------------------------------------------------------| | + + + + + F | 0.04 |-+ ** **-| 0.03 |-+ *** **-| AKG | * * ** | 0.02 |-+ * * **-| 0.01 |-+ * ** *-| | + + + **** + + * * *| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 20 |-+ ### 15 |-+ ##%%%%%%# 10 |-+ ##%%## ####### #%%&&&&&&&&&%%# 5 |-+%%%&&&&&&&&&%&&&&&&&&%# #%&&======****G&&&# z |&&=**G********G***XXXXX&&&&&&&&===******XX&&=***&% 0 |-+**&&&&&XX&&&===********G***G*****XXXX&&&&%%&=***&# G -5 |-+&%%#%%&&&&%%%%&&&&&======&&&&&&&&&&&&&%## #&=**GG G G*G -10 |-+ +# ##%+%%%# +#%%%%%%%%+ #+&GGGGGGG*+ -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.04 |-----------------------------------------------------------| 0.035 |-+ + + + + + F* +-| 0.03 |-+ ** +-| 0.025 |-+ * * **-| AKG 0.02 |-+ * * **-| 0.015 |-+ * ****-| 0.01 |-+ * * +*| 0.005 |-+ + + + ***** + *** * * +*| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 20 |-+ ### 15 |-+ ##%%%%%%# 10 |-+ ##%%## ####### #%%&&&&&&&&&%## 5 |-+%%%&&&&&&&&&%&&&&&&&&%# #%&&======****G&&&# z |&&=**G********G***XXXXX&&&&&&&&===******XX&&****&% 0 |-+**&&&&&XX&&&===********G***G*****XXXX&&&&%%&=***&# G -5 |-+&%%#%%&&&&%%%%&&&&&======&&&&&&&&&&&&&%## #&=**GGGG G*G -10 |-+ +# ##%+%%%# +#%%%%%%%%+ #+&GGGGGGG*+ -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.02 |-----------------------------------------------------------| | + + + + + F | 0.015 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|&&=**G********G***XXXXX&&&&&&&&===******XX&&=***&% 0 |-+**&&&&&XX&&&===********G***G*****XXXX&&&&%%&=***&# G -5 |-+&%%#%%&&&&%%%%&&&&&======&&&&&&&&&&&&&%## #&=**GGGG G*G -10 |-+ +# ##%+%%%# +#%%%%%%%%+ #+&GGGGGGG*+ -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.02 |-----------------------------------------------------------| | + + + + + F | 0.015 |-+ ** **-| | ** ** | AKG 0.01 |-+ ** **-| | *** * | 0.005 |-+ **** * ** *-| | + +* + ** ***+ + * ** *| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 20 |-+ ## 15 |-+ ##%%%%%%# 10 |-+ ###### ####### #%%&&&&&&&&&%# 5 |-+%%%&&&&&&&&&%&&&&&&&&%# #%&&======****G&&&# z |&&=**G********G***XXXX&&&&&&&&&===******XX&&****&% 0 |-+**&&&&&XX&&&===********G***G*****XXXX&&&&%%&=***&# G -5 |-+&%%#%%&&&&%%%%&&&&&======&&&&&&&&&&&&%%# #&=**GGGG G*G -10 |-+ + ##%+%%%# +#%%%%%%%#+ #+&GGGGGGG*+ -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.02 |-----------------------------------------------------------| | + + + + + * F* | 0.015 |-+ ** **-| | ** ** | AKG 0.01 |-+ ** **-| | * ** * | 0.005 |-+ ** * ** *-| | + + + ****** + + * ** *| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 20 |-+ ## 15 |-+ ##%%%%%%# 10 |-+ ###### ####### #%%&&&&&&&&&%# 5 |-+%%%&&&&&&&&&%&&&&&&&&%# #%&&======****G&&&# z |&&=**G********G***XXXX&&&&&&&&&===******XX&&****&% 0 |-+**&&&&&XX&&&===********G***G*****XXXX&&&&%%&=***&# G -5 |-+&%%#%%&&&&%%%%&&&&&======&&&&&&&&&&&&%%# #&=**GGGG GG*G -10 |-+ + ##%+%%%# +#%%%%%%%#+ #+&GGGGGGG=+ -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.04 |-----------------------------------------------------------| 0.035 |-+ + + + + + +-| 0.03 |-+ F* *+-| 0.025 |-+ ** **-| AKG 0.02 |-+ * * **-| 0.015 |-+ * ** *-| 0.01 |-+ * ** *-| 0.005 |-+ + + + **** + ****** * +*| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 20 |-+ 15 |-+ ##%%%%%%# 10 |-+ ###### ##### #%%&&&&&&&&&%# 5 |-+%%%&&&&&&&&&%&&&&&&&&%# #%&&=====*****G&&%# z |&&=**G********G***XXXX&&&&&&&&&===******XX&&****&% 0 |-+**&&&&&&&&&&===********G***G*****XXX&&&&&%%&=***& G G -5 |-+%%##%%%%%%%%#%&&&&&======&&&&&&&&&&&&%%# #%=**GGGG GG*G -10 |-+ + ##+%%## +##%%%%%##+ +&GGGGGGG=+ -15 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.02 |-----------------------------------------------------------| | + + + + + | 0.015 |-+ * F+-| | ** ** | AKG 0.01 |-+ * ** *-| | * ** * | 0.005 |-+ * ** *-| | + + + **** + + * ** * | 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 20 |-+ # | #%%%%%%%%# 10 |-+ #%%%%%## ##%%%%## #%%&&&====&&&&&# |&&&&&&&&&&&&&&&&&&&&&&&&&%%##%&&====********G**&& z 0 |-+***G********G**********G***G*******XX&&&&&&=***&% |&&&&&&&&&&&&&&&&&&===========&&&&&&&&&&&%%# #%&***G# G GG*G -10 |-+ ## ##%%%%%%# ##%%%%%%%## #%=GGGGGGG*& | + + + + + G G G + -20 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.02 |-----------------------------------------------------------| | + + + + + ** ** | 0.015 |-+ ** **-| | ** ** | AKG 0.01 |-+ * * **-| | * ** * | 0.005 |-+ * ** *-| | + + + **** + + * ** *| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 20 |-+ ### | #%%%%%%%%# 10 |-+ #%%%%%%# ##%%%%%## #%%&&&====&&&&&% |&&&&&&&&&&&&&&&&&&&&&&&&&%%##%&&=====*******G**&& z 0 |-+***G********G**********G***G*******XXX&&&&&=***&% |&&&&&&&&&&&&&&&&&&===========&&&&&&&&&&&%%# #%&***G# G GG*G -10 |-+ ### ##%%%%%%# #%%%%%%%%%# #%=GGGGGGG*& | + + + ### + + G G G + -20 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.03 |-----------------------------------------------------------| 0.025 |-+ + + + + + F* *+-| | ** ** | 0.02 |-+ ** **-| AKG0.015 |-+ * ** *-| 0.01 |-+ * ** *-| | * ** * | 0.005 |-+ + + + **** + ****** * +*| 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 20 |-+ ### | #%%%%%%%%# 10 |-+ #%%%%%%# ##%%%%%## #%%&&&====&&&&&%# |&&&&&&&&&&&&&&&&&&&&&&&&&%%##%&&=====*******G**&& z 0 |-+***G********G**********G***G*******XXX&&&&&=***&% |&&&&&&&&&&&&&&&&&&===========&&&&&&&&&&&%%# #%&***G# G GG*G -10 |-+ ### ##%%%%%%# #%%%%%%%%%# #%=GGGGGGG*& | + + + ### + + GGG G + -20 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.02 |-----------------------------------------------------------| | + + + + + F* * | 0.015 |-+ ** **-| | ** ** | AKG 0.01 |-+ *** *-| | * ** * | 0.005 |-+ * ** *-| | + + + **** + + * ** * | 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 20 |-+ ### | #%%%%%%%%# 10 |-+ #%%%%%%# ##%%%%%## #%%&&&====&&&&&%# |&&&&&&&&&&&&&&&&&&&&&&&&&%%##%&&=====*******G**&& z 0 |-+***G********G**********G***G*******XXX&&&&&=***&% |&&&&&&&&&&&&&&&&&&===========&&&&&&&&&&&%%# #%&***G# G GG*G -10 |-+ ### ##%%%%%%## #%%%%%%%%%# #%=GGGGGGG*& | + + + #### + + GGG G + -20 |------------------------------------------------------------ 0 2 4 6 8 10 12 x 0.025 |-----------------------------------------------------------| | + + + + + F* * | 0.02 |-+ ** **-| 0.015 |-+ ** **-| AKG | *** * | 0.01 |-+ * ** *-| 0.005 |-+ * ** *-| | + + + **** + *** * ** * | 0 |-----------------------------------------------------------| 0 2 4 6 8 10 12 : x z init001 : 0.00000 -1.7253 init002 : 3.00000 1.0223 init003 : 6.00000 -2.4251 init004 : 9.00000 6.2014 init005 : 12.00000 -2.9953 xg(087) : 5.18593 -1.3591 xg(200) : 12.00000 -6.9770 xg(020) : 1.14573 1.4170 xg(187) : 11.21608 -10.8045 xg(182) : 10.91457 -8.4694 xg(174) : 10.43216 -5.2482 xg(173) : 10.37186 -6.5653 xg(195) : 11.69849 -6.9921 xg(174) : 10.43216 -9.7446 xg(195) : 11.69849 -11.6105 xg(193) : 11.57789 -7.8930 xg(176) : 10.55276 -8.0013 xg(193) : 11.57789 -10.4012 xg(177) : 10.61307 -9.6507 xg(192) : 11.51759 -10.0426 xg(177) : 10.61307 -13.7653 xg(192) : 11.51759 -11.9540 xg(177) : 10.61307 -10.6391 xg(192) : 11.51759 -10.5042 xg(177) : 10.61307 -9.1501 xg(192) : 11.51759 -8.0703 xg(178) : 10.67337 -10.8544 xg(191) : 11.45729 -11.6296 xg(178) : 10.67337 -14.3221 xg(191) : 11.45729 -10.6500 xg(178) : 10.67337 -10.8146 xg(191) : 11.45729 -8.6841 xg(178) : 10.67337 -11.0336 xg(191) : 11.45729 -12.5466 xg(178) : 10.67337 -8.3580 xg(191) : 11.45729 -13.4612 xg(178) : 10.67337 -8.7787 xg(191) : 11.45729 -8.6482 xg(178) : 10.67337 -7.9213 xg(183) : 10.97487 -6.2374 xg(179) : 10.73367 -9.3511 xg(179) : 10.73367 -9.5225 xg(191) : 11.45729 -12.9243 xg(185) : 11.09548 -10.0113 xg(181) : 10.85427 -10.8885 xg(181) : 10.85427 -10.2932 xg(181) : 10.85427 -7.8961 xg(182) : 10.91457 -8.1976 xg(182) : 10.91457 -9.8540 xg(182) : 10.91457 -10.5336 xg(182) : 10.91457 -8.1394 xg(183) : 10.97487 -12.8259 xg(191) : 11.45729 -9.2811 xg(191) : 11.45729 -12.4174 xg(183) : 10.97487 -13.9000 xg(191) : 11.45729 -10.5631 xg(191) : 11.45729 -10.6264 xg(181) : 10.85427 -9.1911 xg(191) : 11.45729 -9.2868 xg(181) : 10.85427 -12.4761 xg(191) : 11.45729 -9.1413 xg(191) : 11.45729 -12.6349 xg(181) : 10.85427 -11.0920 xg(191) : 11.45729 -9.1540 xg(181) : 10.85427 -10.0068 xg(191) : 11.45729 -8.3856 xg(191) : 11.45729 -9.8775 xg(181) : 10.85427 -11.5036 xg(191) : 11.45729 -8.5755 xg(191) : 11.45729 -11.4515 xg(181) : 10.85427 -9.0657 xg(181) : 10.85427 -10.9758 xg(191) : 11.45729 -9.4070 xg(191) : 11.45729 -3.9019 xg(190) : 11.39698 -9.7866 xg(190) : 11.39698 -11.7433 xg(180) : 10.79397 -11.2716 xg(190) : 11.39698 -15.4252 xg(181) : 10.85427 -10.5445 xg(181) : 10.85427 -11.6655 xg(181) : 10.85427 -10.8062 xg(191) : 11.45729 -10.5890 xg(181) : 10.85427 -11.2534 xg(191) : 11.45729 -12.5259 xg(181) : 10.85427 -9.8293 xg(181) : 10.85427 -12.5010 xg(191) : 11.45729 -13.2368 xg(181) : 10.85427 -11.2081 xg(181) : 10.85427 -12.8714 xg(191) : 11.45729 -9.5950 xg(181) : 10.85427 -10.9892 xg(191) : 11.45729 -9.5663 xg(190) : 11.39698 -12.4827 xg(181) : 10.85427 -9.2846 xg(181) : 10.85427 -10.4309 xg(181) : 10.85427 -6.9376 xg(191) : 11.45729 -11.5101 xg(181) : 10.85427 -14.3327 xg(191) : 11.45729 -10.7433 xg(181) : 10.85427 -10.0790 Number of evaluations: 5 + 95 = 100. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/03_miscellaneous/stk_example_misc05.m] >>>>> /<>/inst/examples/03_miscellaneous/stk_example_misc05.m ***** test stk_example_misc05; close all; assert (isa (model.lognoisevariance, 'stk_gaussiannoise_het0')); #==========================# # stk_example_misc05 # #==========================# 'stk_example_misc05' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/03_miscellaneous/stk_example_misc05.m STK_EXAMPLE_MISC05 Parameter estimation for heteroscedastic noise variance DESCRIPTION We consider a 1d prediction problem with noisy data, where the variance of the noise depends on the input location. A simple heteroscedastic model is used, where the only parameter to be estimated is a dispersion parameter (the square of a scale parameter). More preciesely, the variance of the noise is assumed to be of the form tau^2(x) = phi * (x + 1) ^ 2, and the dispersion parameter phi is estimated together with the parameters of the covariance function. EXPERIMENTAL FEATURE WARNING This script demonstrates an experimental feature of STK (namely, gaussian noise model objects). STK users that wish to experiment with it are welcome to do so, but should be aware that API-breaking changes are likely to happen in future releases. We invite them to direct any questions, remarks or comments about this experimental feature to the STK mailing list. See also: stk_example_kb09 Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. model = scalar structure containing the fields: covariance_type = @stk_materncov52_iso lm = dim = 1 param = 0.066833 0.707310 lognoisevariance = gn = | | Heteroscedastic variance model: tau^2(x) = dispersion * variance_function(x) | | dispersion: 2.4169 [log_dispersion = 0.8825] | variance_function: @(x) (x + 1) .^ 2 | 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/03_miscellaneous/stk_example_misc01.m] >>>>> /<>/inst/examples/03_miscellaneous/stk_example_misc01.m ***** test stk_example_misc01; close all; #==========================# # stk_example_misc01 # #==========================# 'stk_example_misc01' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/03_miscellaneous/stk_example_misc01.m STK_EXAMPLE_MISC01 Several correlation functions from the Matern family The Matern 1/2 correlation function is also known as the "exponential correla- tion function". This is the correlation function of an Ornstein-Ulhenbeck pro- cess. The Matern covariance function tends to the Gaussian correlation function when its regularity (smoothness) parameter tends to infinity. See also: stk_materncov_iso, stk_materncov_aniso Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/03_miscellaneous/stk_example_misc04.m] >>>>> /<>/inst/examples/03_miscellaneous/stk_example_misc04.m ***** test stk_example_misc04; close all; #==========================# # stk_example_misc04 # #==========================# 'stk_example_misc04' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/03_miscellaneous/stk_example_misc04.m STK_EXAMPLE_MISC04 Pareto front simulation DESCRIPTION We consider a bi-objective optimization problem, where the objective functions are modeled as a pair of independent stationary Gaussian processes with a Matern 5/2 anisotropic covariance function. Figure (a): represent unconditional realizations of the Pareto front and and estimate of the probability of being non-dominated at each point of the objective space. Figure (b): represent conditional realizations of the Pareto front and and estimate of the posteriorior probability of being non-dominated at each point of the objective space. EXPERIMENTAL FUNCTION WARNING This script uses the stk_plot_probdom2d function, which is currently considered an experimental function. Read the help for more information. REFERENCE [1] Michael Binois, David Ginsbourger and Olivier Roustant, Quantifying uncertainty on Pareto fronts with Gaussian Process conditional simu- lations, European J. of Operational Research, 2043(2):386-394, 2015. See also: stk_plot_probdom2d Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. simulated Pareto fronts Proba. of being dominated |------------------------| 1000 +---++---+---++---+ +||100% 600 |-+ + $==#&+@&%&$# + +-| | | | | | || | $==#& @&%&$# | + + + + + || | $==#& @&%&$$$$$$$| | | || 400 |-+ $==#& @&%&$# +-| | | || | $==#& @&%&$$$$$$$| 500 +---+ +---+ +||75% 200 |-+ $==#==@&%&*======| | | || | $==#==@==&*======| | | || | $$$#&$@$%&&&&&&&&| | | || 0 |-+ ###@#######second objective---+ +---+ +||50% | & @@@@@@@@@@@| | | || -200 |-+ &@%@@@*@@@@@@| | | || | & % *@@@@@@| | | || | & % *******| -500 +---+ +---+ || -400 |-+ &&%&&&&&&&&&&| | | +||25% | % | | | || -600 |-+ %%%%%%%%%%%| + + + + + || | % | | | | | | || | + + + +%%%%%%%%%%%| -1000 +---++---+---++---+ || -800 |------------------------| -4000-2000 0 2000 4000+||0% -300-200-10000 100020003000 first objective 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/03_miscellaneous/stk_example_misc03.m] >>>>> /<>/inst/examples/03_miscellaneous/stk_example_misc03.m ***** test stk_example_misc03; close all; #==========================# # stk_example_misc03 # #==========================# 'stk_example_misc03' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/03_miscellaneous/stk_example_misc03.m STK_EXAMPLE_MISC03 How to deal with (known) seasonality Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. model = scalar structure containing the fields: covariance_type = @stk_materncov52_iso lm = dim = 1 param = 1.2469 -1.6513 lognoisevariance = -4.5998 model2 = scalar structure containing the fields: covariance_type = @stk_materncov52_iso lm = @(t) [ones(length (t), 1), sin(2 * pi * t / T0), cos(2 * pi * t / T0)] dim = 1 param = -9.5801 -8.1781 lognoisevariance = -4.5770 1 test, 1 passed, 0 known failure, 0 skipped [inst/examples/03_miscellaneous/stk_example_misc02.m] >>>>> /<>/inst/examples/03_miscellaneous/stk_example_misc02.m ***** test stk_example_misc02; close all; #==========================# # stk_example_misc02 # #==========================# 'stk_example_misc02' is a script from the file /<>/debian/octave-stk/usr/share/octave/packages/stk-2.6.1/examples/03_miscellaneous/stk_example_misc02.m STK_EXAMPLE_MISC02 How to use priors on the covariance parameters A Matern covariance in dimension one is considered as an example. A Gaussian prior is used for all three parameters: log-variance, log-regularity and log- inverse-range. The corresponding parameter estimates are Maximum A Posteriori (MAP) estimates or, more precisely, Restricted MAP (ReMAP) estimates. Several values for the variance of the prior are successively considered, to illustrate the effect of this prior variance on the parameter estimates. When the variance is small, the MAP estimate is close to the mode of the prior. On the other hand, when the variance is large, the prior becomes "flat" and the MAP estimate is close to the ReML estimate (see figure b). Additional help for built-in functions and operators is available in the online version of the manual. Use the command 'doc ' to search the manual index. Help and information about Octave is also available on the WWW at https://www.octave.org and via the help@octave.org mailing list. prior std = 10.00 prior std = 1.00 3 |-+ 4 |-+ #### |%%## ####%%%% 3 |-+# ##%%%%% 2 |-+&&&%&&&%# #%&&&&&&&& 2 |-+&&% #%%% %%&&&&&&& 1 |-+X==GG==&&%###&&&XXXXXX& 1 |-+X&&GG==&&% &&&&XXXXX& |====&&&&====G=G=====predicted outp|======&&====G=G========== 0 |-+&&& %&&&&&&&&&&XXXXXX& 0 |-+&&& %&&&&&&&&&&XXXXXX& -1 |-+%# #### #%&&&&&&&& -1 |-+%# #%&&&&&&&& |# + + + ##+####+ -2 |-+ + + + ##+%%%%+ -2 |------------------------- -3 |------------------------- 0 prior std = 0.20.8 1 0 prior std = 0.01.8 1 input x input x 6 |-+ 6 |-+ | ### | # 4 |-+ #%%%%%% 4 |-+ #%%%%% 2 |-+%# #&&% %&&&&&&&& 2 |-+ %%# #&&&&&&&& |X&&==GG=====&&======predicted outp|&&&&=GG=====#%=========== 0 |-+==& %&&=G=G&&&&XXXXX& 0 |-+=== %&=G=G&&&&&&XXX& -2 |-+&% #%&&&&&&& -2 |-+&# #%%&&&&& |%# + + + +#%%%+ |## + + + +###%+ -4 |------------------------- -4 |------------------------- 0 0.2 0.4 0.6 0.8 1 0 0.2 0.4 0.6 0.8 1 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/test/stk_test.m] >>>>> /<>/inst/misc/test/stk_test.m ***** assert(isempty([])) % support for test assert shorthand ***** assert((1 + 1) == 2) ***** test a=1; ***** test assert(~exist('a')); ***** shared a % create a shared variable ***** test a = 3; % assign to a shared variable ***** test assert(a == 3); % variable should equal 3 in this second 'test' block ***** shared b, c % replace shared variables {'a'} --> {'b', 'c'} ***** test assert(~exist('a')); % a no longer exists ***** test assert(isempty(b)); % variables start off empty ***** shared a % recreate a shared variable that had been deleted ***** test assert (isempty(a)); % it is empty, even though it was equal to 3 before ***** shared a, b, c % creates three shared variables a = 1; b = 2; c = 3; % give values to all variables, in the same block ***** assert(isequal([a, b, c], [1, 2, 3])); % test all of them together ***** test c=6; % update a value ***** test % show that the update sticks between blocks assert(isequal([a, b, c], [1, 2, 6])); ***** shared % clear all shared variables ***** assert(~exist('a')) % show that they are cleared ***** error test % not enough input arguments ***** error test(1, 2, 3, 4) % too many input args ***** error garbage % usage on nonexistent function should be ***** error stt_test('test', 'bogus'); % undefined function error ***** error stk_test('test', 'bogus'); % error raised by stk_test itself ***** error stk_test(); ***** error stk_test('disp', 'verbose', [], 'extra arg !!!'); ***** error stk_test([]) ***** error stk_test(0.0) ***** error stk_test('stk_mindist', 0.0) ***** error stk_test('stk_mindist', 'dudule') 24 tests, 24 passed, 0 known failure, 0 skipped [inst/misc/test/stk_isequal_tolrel.m] >>>>> /<>/inst/misc/test/stk_isequal_tolrel.m ***** shared r1, r2, r3, a, b, tolrel a = 1.01; b = 1.02; tolrel = 0.1; ***** error rr = stk_isequal_tolrel(); ***** error rr = stk_isequal_tolrel(a); ***** test r1 = stk_isequal_tolrel(a, b); ***** test r2 = stk_isequal_tolrel(a, b, tolrel); ***** test r3 = stk_isequal_tolrel(a, [b b]); ***** test assert (isequal (r1, false)); ***** test assert (isequal (r2, true)); ***** test assert (isequal (r3, false)); ***** test a = struct('u', []); b = struct('v', []); assert(~ stk_isequal_tolrel(a, b)) ***** test a = struct('u', 1.01); b = struct('u', 1.02); assert(stk_isequal_tolrel(a, b, tolrel)) 10 tests, 10 passed, 0 known failure, 0 skipped [inst/misc/test/stk_isequal_tolabs.m] >>>>> /<>/inst/misc/test/stk_isequal_tolabs.m ***** shared r1, r2, a, b, tolabs a = 1.01; b = 1.02; tolabs = 0.1; ***** error rr = stk_isequal_tolabs(); ***** error rr = stk_isequal_tolabs(a); ***** test r1 = stk_isequal_tolabs(a, b); ***** test r2 = stk_isequal_tolabs(a, b, tolabs); ***** test assert(~r1); ***** test assert(r2); ***** test a = struct('u', []); b = struct('v', []); assert(~ stk_isequal_tolabs(a, b)) ***** test a = struct('u', 1.01); b = struct('u', 1.02); assert(stk_isequal_tolabs(a, b, tolabs)) 8 tests, 8 passed, 0 known failure, 0 skipped [inst/misc/pareto/stk_isdominated.m] >>>>> /<>/inst/misc/pareto/stk_isdominated.m ***** test A = [1 3 2]; B = [0 0 0]; [isdom, dpos] = stk_isdominated (A, B); assert (isdom == 1); assert (dpos == 1); ***** test A = [1 3 2]; B = [0 0 3]; [isdom, dpos] = stk_isdominated (A, B); assert (isdom == 0); assert (dpos == 0); ***** test A = [1 3 2]; B = [0 0 0; 0 0 3]; [isdom, dpos] = stk_isdominated (A, B); assert (isdom == 1); assert (dpos == 1); ***** test A = [1 3 2]; B = [0 0 3; 0 0 0]; [isdom, dpos] = stk_isdominated (A, B); assert (isdom == 1); assert (dpos == 2); ***** test A = [1 3 2; 1 0 1; -1 0 0; 1 3 2]; B = [1 0 0; 0 0 3; 0 0 0]; [isdom, dpos] = stk_isdominated (A, B); assert (isequal (isdom, logical ([1; 1; 0; 1]))); assert (isequal (dpos, [3; 3; 0; 3])); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/misc/pareto/stk_paretofind.m] >>>>> /<>/inst/misc/pareto/stk_paretofind.m ***** shared x, ndpos, drank x = [ ... 0 2; ... 2 2; ... ]; ***** test [ndpos, drank] = stk_paretofind (x); ***** assert (isequal (ndpos, 1)); ***** assert (isequal (drank, [0; 1])); ***** shared x, ndpos, drank x = [ ... 3 2; ... 2 2; ... ]; ***** test [ndpos, drank] = stk_paretofind (x); ***** assert (isequal (ndpos, 2)); ***** assert (isequal (drank, [1; 0])); ***** shared x, ndpos, drank x = [ ... 1 0; ... 2 0; ... 0 2; ... 2 2; ... -1 3 ]; ***** test [ndpos, drank] = stk_paretofind (x); ***** assert (isequal (ndpos, [5; 3; 1])); ***** assert (isequal (drank, [0; 3; 0; 2; 0])); ***** shared x, ndpos, drank x = [ ... 1 0; ... 2 0; ... 0 2; ... 2 2; ... -1 3; ... -1 4; ... 2 2 ]; ***** test [ndpos, drank] = stk_paretofind (x); ***** assert (isequal (ndpos, [5; 3; 1])); ***** assert (isequal (drank, [0; 3; 0; 2; 0; 1; 2])); 12 tests, 12 passed, 0 known failure, 0 skipped [inst/misc/pareto/stk_dominatedhv.m] >>>>> /<>/inst/misc/pareto/stk_dominatedhv.m ***** error hv = stk_dominatedhv (); ***** error hv = stk_dominatedhv (-y, 'incorrect ref type'); ***** error hv = stk_dominatedhv (-y, [0 0]); ***** error hv = stk_dominatedhv (-y, [0 0 0 0 0], 0, 'too many input args'); ***** shared y, hv0 % Example from README.TXT in WFG 1.10 y = [ ... 0.598 0.737 0.131 0.916 6.745; ... 0.263 0.740 0.449 0.753 6.964; ... 0.109 8.483 0.199 0.302 8.872 ]; hv0 = 1.1452351120; ***** test hv = stk_dominatedhv (-y); assert (stk_isequal_tolrel (hv, hv0, 1e-10)); ***** test yy = stk_dataframe (- y); % Check that @stk_dataframe inputs are accepted hv = stk_dominatedhv (yy); assert (stk_isequal_tolrel (hv, hv0, 1e-10)); ***** test hv = stk_dominatedhv (-y, [], 0); assert (stk_isequal_tolrel (hv, hv0, 1e-10)); ***** test hv = stk_dominatedhv (-y, [0 0 0 0 0]); assert (stk_isequal_tolrel (hv, hv0, 1e-10)); ***** test hv = stk_dominatedhv (1 - y, [1 1 1 1 1]); assert (stk_isequal_tolrel (hv, hv0, 1e-10)); ***** test r = stk_dominatedhv (-y, [], 1); hv = sum (r.sign .* prod (r.xmax - r.xmin, 2)); assert (stk_isequal_tolrel (hv, hv0, 1e-10)); ***** shared y1, y2, y0, S, S1 y0 = [1.00 1.00]; % Reference point y1 = [1.50 1.50]; % Above the reference point y2 = [0.50 0.50]; % Below the reference point ***** assert (isequal (0.00, stk_dominatedhv (y1, y0))); ***** assert (isequal (0.25, stk_dominatedhv (y2, y0))); ***** assert (isequal (0.25, stk_dominatedhv ([y1; y2], y0))); ***** assert (isequal (0.25, stk_dominatedhv ([y2; y1; y2], y0))); ***** test S = stk_dominatedhv (y1, y0, 1); % empty decomposition ***** assert (isequal (size (S.xmin, 1), 0)); ***** test S = stk_dominatedhv (y2, y0, 1); % trivial decomposition ***** assert (isequal (S.sign, 1)); ***** assert (isequal (S.xmin, y2)); ***** assert (isequal (S.xmax, y0)); ***** test S1 = stk_dominatedhv ([y2; y0], y0, 1); % shoud be the same as before ***** assert (isequal (S1, S)); ***** test S1 = stk_dominatedhv ([y2; y1], y0, 1); % shoud be the same as before ***** assert (isequal (S1, S)); ***** test S1 = stk_dominatedhv ([y2; y2], y0, 1); % shoud be the same as before ***** assert (isequal (S1, S)); ***** test for d = 1:10, y = - 0.5 * ones (1, d); hv = stk_dominatedhv (y); assert (isequal (stk_dominatedhv (y), 0.5 ^ d)); end ***** test for d = 1:10, y = - 0.5 * ones (1, d); r = stk_dominatedhv (y, [], 1); hv = sum (r.sign .* prod (r.xmax - r.xmin, 2)); assert (isequal (stk_dominatedhv (y), 0.5 ^ d)); end ***** shared y, y_ref, dv, hv0 y1 = [0.25 0.75]; y2 = [0.50 0.50]; y3 = [0.75 0.25]; y_ref = [1 1]; y = {[], y1, y2, y3; [y1; y2], [y1; y3], [y2; y3], [y1; y2; y3]}; dv = 0.25 ^ 2; hv0 = [0 3 4 3; 5 5 5 6] * dv; ***** test hv1 = stk_dominatedhv (y, y_ref); assert (isequal (hv0, hv1)); ***** test r = stk_dominatedhv (y, y_ref, 1); % Check the first decomposition, which should be empty assert (isempty (r(1).sign)); assert (isempty (r(1).xmin)); assert (isempty (r(1).xmax)); % Check the other decompositions for i = 2:6, hv2 = sum (r(i).sign .* prod (r(i).xmax - r(i).xmin, 2)); assert (isequal (hv0(i), hv2)); end ***** test y = (0.3:0.1:0.8)'; hv0 = 0.7; hv1 = stk_dominatedhv (y, 1); r = stk_dominatedhv (y, 1, true); hv2 = sum (r.sign .* prod (r.xmax - r.xmin, 2)); ***** test % four non-dominated points (hypervolume) zr = [1 1]; zi = [0.2 0.8; 0.4 0.6; 0.6 0.4; 0.8 0.2] P = perms (1:4); for i = 1:24 HV = stk_dominatedhv (zi(P(i, :), :), zr, 0); assert (stk_isequal_tolrel (HV, 0.4, 1e-15)); end zi = 0.20000 0.80000 0.40000 0.60000 0.60000 0.40000 0.80000 0.20000 ***** test % four non-dominated points (decomposition) zr = [1 1]; zi = [0.2 0.8; 0.4 0.6; 0.6 0.4; 0.8 0.2] P = perms (1:4); for i = 1:24 S = stk_dominatedhv (zi(P(i, :), :), zr, 1); HV = sum (S.sign .* prod (S.xmax - S.xmin, 2)); assert (stk_isequal_tolrel (HV, 0.4, 1e-15)); end zi = 0.20000 0.80000 0.40000 0.60000 0.60000 0.40000 0.80000 0.20000 ***** test % a case with 8 points and 5 objectives % http://sourceforge.net/p/kriging/tickets/33 yr = [1.03 0.91 0.96 1.99 16.2]; y = [ ... 0.8180 0.5600 0.1264 1.0755 1.2462; ... 0.8861 0.6928 0.2994 0.7228 0.9848; ... 0.9021 0.8829 0.6060 0.1642 0.4282; ... 0.9116 0.3097 0.8601 0.0468 0.2813; ... 0.9306 0.1429 0.6688 0.1462 1.3661; ... 0.9604 0.3406 0.4046 0.7239 1.8741; ... 0.9648 0.7764 0.5199 0.4098 1.3436; ... 0.9891 0.4518 0.7956 0.1164 1.2025]; hv1 = stk_dominatedhv (y, yr, 0); S = stk_dominatedhv (y, yr, 1); hv2 = sum (S.sign .* prod (S.xmax - S.xmin, 2)); assert (isequal (size (S.sign), [87 1])); assert (isequal (size (S.xmin), [87 5])); assert (isequal (size (S.xmax), [87 5])); assert (stk_isequal_tolrel (hv1, 1.538677420906463, 2 * eps)); assert (stk_isequal_tolrel (hv1, hv2, eps)); ***** test % with random data NREP = 5; for p = 1:5 for n = 1:10 for i = 1:NREP % Draw random data y = rand (n, p); y = - y ./ (norm (y)); % Compute hypervolume directly hv1 = stk_dominatedhv (y, [], 0); % Compute decomposition, then hypervolume R = stk_dominatedhv (y, [], 1); hv2 = sum (R.sign .* prod (R.xmax - R.xmin, 2)); % Compare results assert (stk_isequal_tolabs (hv1, hv2, eps)); end end end 35 tests, 35 passed, 0 known failure, 0 skipped [inst/misc/design/stk_maxabscorr.m] >>>>> /<>/inst/misc/design/stk_maxabscorr.m ***** assert (stk_isequal_tolabs (0.0, ... % Test on an OLHS(5) stk_maxabscorr ([0.4 0.8 0 -0.4 -0.8; -0.8 0.4 0 0.8 -0.4]'))); 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/design/stk_phipcrit.m] >>>>> /<>/inst/misc/design/stk_phipcrit.m ***** shared x x = [0, 0.2, 0.4, 0.6, 0.8, 1.0; 0, 0.6, 0.8, 1.0, 0.2, 0.4]'; ***** assert (stk_isequal_tolabs ... (stk_phipcrit (x, 10), 3.946317664423303, 1e-15)) ***** assert (stk_isequal_tolabs ... (stk_phipcrit (x, 50), 3.614077252813102, 1e-15)); ***** assert (stk_isequal_tolabs ... (stk_phipcrit (x, 100), 3.574589859827413, 1e-15)); ***** assert (stk_isequal_tolabs ... (stk_phipcrit (x, 1e9), 1 / stk_mindist (x), 1e-8)); ***** assert (isequal (stk_phipcrit (ones (2)), Inf)); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_student_cdf.m] >>>>> /<>/inst/misc/distrib/stk_distrib_student_cdf.m ***** assert (stk_isequal_tolrel ( ... stk_distrib_student_cdf ([-1; 0; 1], [1 2], 0, [1 10]), ... [0.25, ... % tcdf ((-1 - 0)/1, 1) 4.6473271920707004e-01; ... % tcdf ((-1 - 0)/10, 2) 0.50, ... % tcdf (( 0 - 0)/1, 1) 0.50; ... % tcdf (( 0 - 0)/10, 2) 0.75, ... % tcdf (( 1 - 0)/1, 1) 5.3526728079292996e-01 ... % tcdf (( 1 - 0)/10, 2) ], 4 * eps)) ***** test [p, q] = stk_distrib_student_cdf (1e10, 2); assert (isequal (p, 1.0)); assert (stk_isequal_tolrel (q, 4.999999999999999999925e-21, 10 * eps)); ***** assert (isequal (stk_distrib_student_cdf (0.0, 1), 0.5)); ***** assert (isequal (stk_distrib_student_cdf (inf, 1), 1.0)); ***** assert (isequal (stk_distrib_student_cdf (-inf, 1), 0.0)); ***** assert (isnan (stk_distrib_student_cdf (nan, 1))); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_bivnorm_cdf.m] >>>>> /<>/inst/misc/distrib/stk_distrib_bivnorm_cdf.m ***** test z1 = [0 1; -1 2]; z2 = [0 1; 1 -2]; z = cat (3, z1, z2); % 2 x 2 x 2 mu1 = 0; % 1 x 1 x 1 mu2 = [0 1]; % 1 x 2 x 1 sigma1 = [1 3]; % 1 x 2 x 1 sigma2 = [1; 2]; % 2 x 1 x 1 rho = [0; 0.5]; % 2 x 1 x 1 %% BROADCASTING => the result will be a 2 x 2 matrix p = stk_distrib_bivnorm_cdf (z, mu1, mu2, sigma1, sigma2, rho); p11 = 0.25; % mvncdf ([ 0 0], [0 0], [1 0; 0 1]); p12 = 0.315279329909118; % mvncdf ([ 1 1], [0 1], [9 0; 0 1]); p21 = 0.146208349559646; % mvncdf ([-1 1], [0 0], [1 1; 1 4]); p22 = 0.064656239880040; % mvncdf ([ 2 -2], [0 1], [9 3; 3 4]); assert (stk_isequal_tolabs (p, [p11 p12; p21 p22], 1e-14)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([inf -inf], 0, 0, 1, 1, 0); assert ((p == 0.0) && (q == 1.0)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([inf -10], 0, 0, 1, 1, 0); assert (stk_isequal_tolrel (p, 7.619853024160489e-24, 1e-12)) assert (q == 1.0) ***** test [p, q] = stk_distrib_bivnorm_cdf ([inf 0], 0, 0, 1, 1, 0); assert (stk_isequal_tolrel (p, 0.5, 1e-12)) assert (stk_isequal_tolrel (q, 0.5, 1e-12)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([inf 10], 0, 0, 1, 1, 0); assert (p == 1.0); assert (stk_isequal_tolrel (q, 7.619853024160489e-24, 1e-12)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([inf inf], 0, 0, 1, 1, 0); assert ((p == 1.0) && (q == 0.0)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([-inf inf], 0, 0, 1, 1, 0); assert ((p == 0.0) && (q == 1.0)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([-10 inf], 0, 0, 1, 1, 0); assert (stk_isequal_tolrel (p, 7.619853024160489e-24, 1e-12)) assert (q == 1.0) ***** test [p, q] = stk_distrib_bivnorm_cdf ([0 inf], 0, 0, 1, 1, 0); assert (stk_isequal_tolrel (p, 0.5, 1e-12)) assert (stk_isequal_tolrel (q, 0.5, 1e-12)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([10 inf], 0, 0, 1, 1, 0); assert (p == 1.0); assert (stk_isequal_tolrel (q, 7.619853024160489e-24, 1e-12)) ***** test [p, q] = stk_distrib_bivnorm_cdf ([inf inf], 0, 0, 1, 1, 0); assert ((p == 1.0) && (q == 0.0)) ***** test % A mixture of singular and non-singular cases p = stk_distrib_bivnorm_cdf ([0 0], 0, 0, [1; 0], 1, 0); assert (isequal (p, [0.25; 0.5])); 12 tests, 12 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_normal_pdf.m] >>>>> /<>/inst/misc/distrib/stk_distrib_normal_pdf.m ***** assert (stk_isequal_tolrel (stk_distrib_normal_pdf ([1; 3], 1, [1 10]), ... [1 / sqrt(2 * pi) ... % normpdf ((1 - 1) / 1) 0.1 / sqrt(2 * pi); ... % normpdf ((1 - 1) / 10) / 10 exp(-2) / sqrt(2 * pi) ... % normpdf ((3 - 1) / 1) 3.910426939754558780e-2 ... % normpdf ((3 - 1) / 10) / 10 ], eps)); ***** assert (isequal (stk_distrib_normal_pdf (inf), 0.0)); ***** assert (isequal (stk_distrib_normal_pdf (-inf), 0.0)); ***** assert (isnan (stk_distrib_normal_pdf (nan))); ***** assert (isnan (stk_distrib_normal_pdf (0, 0, -1))); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_normal_cdf.m] >>>>> /<>/inst/misc/distrib/stk_distrib_normal_cdf.m ***** assert (stk_isequal_tolrel (stk_distrib_normal_cdf ([1; 3], 1, [1 10]), ... [0.5, ... % normcdf ((1 - 1) / 1) 0.5; ... % normcdf ((1 - 1) / 10) 0.5 * erfc(-sqrt(2)), ... % normcdf ((3 - 1) / 1) 0.5 * erfc(-0.1*sqrt(2)) ... % normcdf ((3 - 1) / 10) ], eps)); ***** test [p, q] = stk_distrib_normal_cdf (10); assert (isequal (p, 1.0)); assert (stk_isequal_tolrel (q, 7.6198530241604975e-24, eps)); ***** assert (isequal (stk_distrib_normal_cdf ( 0.0), 0.5)); ***** assert (isequal (stk_distrib_normal_cdf ( inf), 1.0)); ***** assert (isequal (stk_distrib_normal_cdf (-inf), 0.0)); ***** assert (isnan (stk_distrib_normal_cdf ( nan))); ***** assert (isnan (stk_distrib_normal_cdf (0, 0, -1))); ***** assert (isequal (stk_distrib_normal_cdf (0, 0, 0), 1.0)); ***** assert (isequal (stk_distrib_normal_cdf (0, 1, 0), 0.0)); ***** assert (isequal (stk_distrib_normal_cdf (1, 0, 0), 1.0)); 10 tests, 10 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_normal_crps.m] >>>>> /<>/inst/misc/distrib/stk_distrib_normal_crps.m ***** assert (stk_isequal_tolabs (stk_distrib_normal_crps (0.0, 0.0, 0.0), 0.0)) ***** assert (stk_isequal_tolabs (stk_distrib_normal_crps (0.0, 0.0, 1.0), (sqrt(2) - 1)/sqrt(pi))) ***** shared n, x_obs, mu, sigma, crps, crps_exp x_obs = [ 1.78; -2.29; -1.62; -5.89; 2.88; 0.65; 2.74; -3.42]; % observations mu = [-0.31; -0.59; 1.48; -1.57; -0.05; -0.27; 1.05; 1.27]; % predictions sigma = [ 2.76; 6.80; 1.63; 1.19; 4.98; 9.60; 5.85; 2.24]; % standard dev n = size(x_obs, 1); crps = stk_distrib_normal_crps (x_obs, mu, sigma); ***** assert (isequal (size (crps), [n, 1])) ***** assert (all (crps >= 0)) ***** assert (stk_isequal_tolabs (crps, stk_distrib_normal_crps(mu, x_obs, sigma))) ***** assert (stk_isequal_tolabs (stk_distrib_normal_crps (x_obs, mu, 0), abs (x_obs - mu))) crps_ref = [ ... 1.247856605928301 ... 1.757798727719891 ... 2.216236225997414 ... 3.648696666764968 ... 1.832355265287495 ... 2.278618297947438 ... 1.560544734359158 ... 3.455697443411153 ]; assert (stk_isequal_tolabs (crps, crps_ref, 1e-10)); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_student_pdf.m] >>>>> /<>/inst/misc/distrib/stk_distrib_student_pdf.m ***** assert (stk_isequal_tolrel ( ... stk_distrib_student_pdf ([1; 3], [1; 2], [0 1], [1 10]), ... [0.50 / pi ... % tpdf ((1 - 1) / 10, 1) 0.10 / pi; ... % tpdf ((1 - 1) / 10, 1) / 10 1 / (11 * sqrt(11)) ... % tpdf ((3 - 0) / 1, 2) / 1 3.4320590294804165e-02 ... % tpdf ((3 - 1) / 10, 2) / 10 ], eps)); ***** assert (isequal (stk_distrib_student_pdf ( inf, 1.0), 0.0)); ***** assert (isequal (stk_distrib_student_pdf (-inf, 1.0), 0.0)); ***** assert (isnan (stk_distrib_student_pdf ( nan, 1.0))); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_normal_ei.m] >>>>> /<>/inst/misc/distrib/stk_distrib_normal_ei.m ***** assert (stk_isequal_tolrel (stk_distrib_normal_ei (0.0), 1 / sqrt (2 * pi), eps)) ***** test % Decreasing as a function of z ei = stk_distrib_normal_ei (linspace (-10, 10, 200)); assert (all (diff (ei) < 0)) ***** shared M, mu, sigma, ei M = randn (1, 10); mu = randn (5, 1); sigma = 1 + rand (1, 1, 7); ei = stk_distrib_normal_ei (M, mu, sigma); ***** assert (isequal (size (ei), [5, 10, 7])) ***** assert (all (ei(:) >= 0)) ***** assert (isequal (ei, stk_distrib_normal_ei (M, mu, sigma, false))); ***** assert (isequal (ei, stk_distrib_normal_ei (-M, -mu, sigma, true))); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/misc/distrib/stk_distrib_student_ei.m] >>>>> /<>/inst/misc/distrib/stk_distrib_student_ei.m ***** assert (stk_isequal_tolrel (stk_distrib_student_ei (0, 2), 1 / sqrt (2), eps)) ***** test % Decreasing as a function of z ei = stk_distrib_student_ei (linspace (-10, 10, 200), 3.33); assert (all (diff (ei) < 0)) ***** shared M, mu, sigma, ei, nu M = randn (1, 10); mu = randn (5, 1); sigma = 1 + rand (1, 1, 7); nu = 2; ei = stk_distrib_student_ei (M, nu, mu, sigma); ***** assert (isequal (size (ei), [5, 10, 7])) ***** assert (all (ei(:) >= 0)) ***** assert (isequal (ei, stk_distrib_student_ei (M, nu, mu, sigma, false))); ***** assert (isequal (ei, stk_distrib_student_ei (-M, nu, -mu, sigma, true))); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/misc/error/stk_error.m] >>>>> /<>/inst/misc/error/stk_error.m ***** shared errmsg, mnemonic, badstack errmsg = 'Go ahead, make my day.'; mnemonic = 'ClintEastwood'; badstack = 0; % not a valid stack structure ***** error stk_error(errmsg, mnemonic); ***** error stk_error (errmsg, mnemonic, badstack); ***** error id=STK:stk_error:InvalidArgument stk_error (errmsg, mnemonic, badstack); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/misc/parallel/@stk_parallel_engine_none/stk_parallel_engine_none.m] >>>>> /<>/inst/misc/parallel/@stk_parallel_engine_none/stk_parallel_engine_none.m ***** test stk_test_class ('stk_parallel_engine_none') 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/parallel/@stk_parallel_engine_parfor/stk_parallel_engine_parfor.m] >>>>> /<>/inst/misc/parallel/@stk_parallel_engine_parfor/stk_parallel_engine_parfor.m ***** test if exist ('matlabpool') || exist ('parpool') stk_test_class ('stk_parallel_engine_parfor') end 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/optim/stk_optim_testmin_unc.m] >>>>> /<>/inst/misc/optim/stk_optim_testmin_unc.m ***** shared algo algo = stk_options_get ('stk_param_estim', 'minimize_unc'); ***** error b = stk_optim_testmin_unc (); ***** assert (stk_optim_testmin_unc (algo)); ***** assert (~ stk_optim_testmin_unc ('dudule')); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/misc/optim/stk_optim_testmin_box.m] >>>>> /<>/inst/misc/optim/stk_optim_testmin_box.m ***** shared algo algo = stk_options_get ('stk_param_estim', 'minimize_box'); ***** error b = stk_optim_testmin_box (); ***** assert (stk_optim_testmin_box (algo)); ***** assert (~ stk_optim_testmin_box ('dudule')); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/misc/optim/@stk_optim_octavesqp/stk_optim_octavesqp.m] >>>>> /<>/inst/misc/optim/@stk_optim_octavesqp/stk_optim_octavesqp.m ***** test stk_test_class ('stk_optim_octavesqp') 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/optim/stk_minimize_unconstrained.m] >>>>> /<>/inst/misc/optim/stk_minimize_unconstrained.m ***** test % Call fminsearch using function name if stk_optim_isavailable ('fminsearch') assert (stk_optim_testmin_unc ('fminsearch')); end ***** test % Call fminsearch directly, using algorithm object if stk_optim_isavailable ('fminsearch') algo = stk_optim_fminsearch ('TolX', 1e-12, 'TolFun', 1e-12); assert (stk_optim_testmin_unc (algo)); end ***** test % Call sqp using function name if stk_optim_isavailable ('octavesqp') assert (stk_optim_testmin_unc ('octavesqp')); end ***** test % Call sqp directly, using algorithm object if stk_optim_isavailable ('octavesqp') algo = stk_optim_octavesqp (); assert (stk_optim_testmin_unc (algo)); end ***** error assert (stk_optim_testmin_unc ('InexistentOptimizer')); ***** error assert (stk_optim_testmin_unc (100)); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/misc/optim/stk_minimize_boxconstrained.m] >>>>> /<>/inst/misc/optim/stk_minimize_boxconstrained.m ***** test % Call fmincon using function name if stk_optim_isavailable ('fmincon') assert (stk_optim_testmin_box ('fmincon')); end ***** test % Call fmincon directly, using algorithm object if stk_optim_isavailable ('fmincon') algo = stk_optim_fmincon ('TolX', 1e-12, 'TolFun', 1e-12); assert (stk_optim_testmin_box (algo)); end ***** test % Call sqp using function name if stk_optim_isavailable ('octavesqp') assert (stk_optim_testmin_box ('octavesqp')); end ***** test % Call sqp directly, using algorithm object if stk_optim_isavailable ('octavesqp') algo = stk_optim_octavesqp (); assert (stk_optim_testmin_box (algo)); end ***** error assert (stk_optim_testmin_box ('InexistentOptimizer')); ***** error assert (stk_optim_testmin_box (100)); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/misc/optim/@stk_optim_fmincon/stk_optim_fmincon.m] >>>>> /<>/inst/misc/optim/@stk_optim_fmincon/stk_optim_fmincon.m ***** test stk_test_class ('stk_optim_fmincon') 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/optim/@stk_optim_fminsearch/stk_optim_fminsearch.m] >>>>> /<>/inst/misc/optim/@stk_optim_fminsearch/stk_optim_fminsearch.m ***** test stk_test_class ('stk_optim_fminsearch') 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/optim/@stk_optim_optimizer_/stk_optim_optimizer_.m] >>>>> /<>/inst/misc/optim/@stk_optim_optimizer_/stk_optim_optimizer_.m ***** test stk_test_class ('stk_optim_optimizer_') 1 test, 1 passed, 0 known failure, 0 skipped [inst/misc/text/stk_sprintf_colvect_scientific.m] >>>>> /<>/inst/misc/text/stk_sprintf_colvect_scientific.m ***** shared x, s x = [1.2; -34567]; ***** test s = stk_sprintf_colvect_scientific(x, 1); ***** assert (isequal(s, ['#'; '#'])) ***** test s = stk_sprintf_colvect_scientific(x, 3); ***** assert (isequal(s, ['###'; '###'])) ***** test s = stk_sprintf_colvect_scientific(x, 5); ***** assert (isequal(s, ['#####'; '#####'])) ***** test s = stk_sprintf_colvect_scientific(x, 6); ***** assert (isequal(s, [' 1e+00'; '-3e+04'])) ***** test s = stk_sprintf_colvect_scientific(x, 7); ***** assert (isequal(s, [' 1e+00'; '-3e+04'])) ***** test s = stk_sprintf_colvect_scientific(x, 8); ***** assert (isequal(s, [' 1.2e+00'; '-3.5e+04'])) ***** test s = stk_sprintf_colvect_scientific(x, 9); ***** assert (isequal(s, [' 1.20e+00'; '-3.46e+04'])) ***** test s = stk_sprintf_colvect_scientific(x, 10); ***** assert (isequal(s, [' 1.200e+00'; '-3.457e+04'])) ***** test s = stk_sprintf_colvect_scientific(x, 11); ***** assert (isequal(s, [' 1.2000e+00'; '-3.4567e+04'])) ***** test s = stk_sprintf_colvect_scientific(x, 12); ***** assert (isequal(s, [' 1.2000e+00'; '-3.4567e+04'])) ***** shared x, s x = [0.9; 0.91; 0.99; 0.999]; ***** test s = stk_sprintf_colvect_scientific (x, 4); ***** assert (isequal(s, ['####'; '####'; '####'; '####'])) ***** test s = stk_sprintf_colvect_scientific (x, 5); ***** assert (isequal(s, ['9e-01'; '9e-01'; '1e+00'; '1e+00'])) ***** test s = stk_sprintf_colvect_scientific (x, 6); ***** assert (isequal(s, ['9e-01'; '9e-01'; '1e+00'; '1e+00'])) ***** test s = stk_sprintf_colvect_scientific (x, 7); ***** assert (isequal(s, ['9.0e-01'; '9.1e-01'; '9.9e-01'; '1.0e+00'])) ***** test s = stk_sprintf_colvect_scientific (x, 8); ***** assert (isequal(s, ['9.00e-01'; '9.10e-01'; '9.90e-01'; '9.99e-01'])) ***** shared x, s x = [0.9; -0.91; 0.99; 0.999]; ***** test s = stk_sprintf_colvect_scientific (x, 4); ***** assert (isequal(s, ['####'; '####'; '####'; '####'])) ***** test s = stk_sprintf_colvect_scientific (x, 5); ***** assert (isequal(s, ['#####'; '#####'; '#####'; '#####'])) ***** test s = stk_sprintf_colvect_scientific (x, 6); ***** assert (isequal(s, [' 9e-01'; '-9e-01'; ' 1e+00'; ' 1e+00'])) ***** test s = stk_sprintf_colvect_scientific (x, 7); ***** assert (isequal(s, [' 9e-01'; '-9e-01'; ' 1e+00'; ' 1e+00'])) ***** test s = stk_sprintf_colvect_scientific (x, 8); ***** assert (isequal(s, [' 9.0e-01'; '-9.1e-01'; ' 9.9e-01'; ' 1.0e+00'])) ***** test x = [1e6; -1e10; 1e-221]; s = stk_sprintf_colvect_scientific(x, 10); assert(isequal(s, [' 1e+006'; '-1e+010'; ' 1e-221'])); 41 tests, 41 passed, 0 known failure, 0 skipped [inst/misc/text/stk_sprintf_colvect.m] >>>>> /<>/inst/misc/text/stk_sprintf_colvect.m ***** shared s ***** test s = stk_sprintf_colvect ([1 1e1], 6); ***** assert (isequal (s, [' 1'; '10'])) ***** test s = stk_sprintf_colvect ([1 1e3], 6); ***** assert (isequal (s, [' 1'; '1000'])) ***** test s = stk_sprintf_colvect ([1 1e5], 6); ***** assert (isequal (s, [' 1'; '100000'])) ***** test s = stk_sprintf_colvect ([1 1e6], 6); ***** assert (isequal (s, ['1e+00'; '1e+06'])) 8 tests, 8 passed, 0 known failure, 0 skipped [inst/misc/text/stk_sprintf_colvect_fixedpoint.m] >>>>> /<>/inst/misc/text/stk_sprintf_colvect_fixedpoint.m ***** shared x, s x = [1.2; 3.48]; ***** test s = stk_sprintf_colvect_fixedpoint(x, 1); ***** assert (isequal(s, ['1'; '3'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 2); ***** assert (isequal(s, ['1'; '3'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 3); ***** assert (isequal(s, ['1.2'; '3.5'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 4); ***** assert (isequal(s, ['1.20'; '3.48'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 5); ***** assert (isequal(s, ['1.20'; '3.48'])) ***** shared x, s x = [1.2; -3.48]; ***** test s = stk_sprintf_colvect_fixedpoint(x, 1); ***** assert (isequal(s, ['#'; '#'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 2); ***** assert (isequal(s, [' 1'; '-3'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 3); ***** assert (isequal(s, [' 1'; '-3'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 4); ***** assert (isequal(s, [' 1.2'; '-3.5'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 5); ***** assert (isequal(s, [' 1.20'; '-3.48'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 6); ***** assert (isequal(s, [' 1.20'; '-3.48'])) ***** shared x, s x = [0.2; 0.48]; ***** test s = stk_sprintf_colvect_fixedpoint(x, 1); ***** assert (isequal(s, ['0'; '0'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 2); ***** assert (isequal(s, ['0'; '0'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 3); ***** assert (isequal(s, ['0.2'; '0.5'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 4); ***** assert (isequal(s, ['0.20'; '0.48'])) ***** test s = stk_sprintf_colvect_fixedpoint(x, 5); ***** assert (isequal(s, ['0.20'; '0.48'])) 32 tests, 32 passed, 0 known failure, 0 skipped [inst/misc/text/stk_disp_progress.m] >>>>> /<>/inst/misc/text/stk_disp_progress.m ***** error stk_disp_progress ('toto ', 0, 1); ***** test stk_disp_progress ('toto ', 1, 1); warning: implicit conversion from numeric to char toto ***** error stk_disp_progress ('toto ', 2, 1); ***** test stk_disp_progress ('toto ', 1, 2); stk_disp_progress ('toto ', 2, 2); warning: implicit conversion from numeric to char toto toto 4 tests, 4 passed, 0 known failure, 0 skipped [inst/misc/dist/stk_dist.m] >>>>> /<>/inst/misc/dist/stk_dist.m ***** error stk_dist(); ***** error stk_dist(0, 0, 0); ***** error stk_dist(0, 0, 0, 0); ***** error stk_dist(0, ones(1, 2)); ***** error stk_dist(eye(3), ones(1, 2)); ***** error stk_dist(ones(2, 1), zeros(2)); ***** shared x, y, z x = zeros(11, 5); y = zeros(13, 5); z = ones(7, 5); ***** test Dx = stk_dist(x); assert(isequal(Dx, zeros(11))); ***** test Dxx = stk_dist(x, x); assert(isequal(Dxx, zeros(11))); ***** test Dxy = stk_dist(x, y); assert(isequal(Dxy, zeros(11, 13))); ***** test Dzz = stk_dist(z, z); assert(isequal(Dzz, zeros(7))); ***** test Dxz = stk_dist(x, z); assert(stk_isequal_tolabs(Dxz, sqrt(5)*ones(11, 7))); ***** test x = randn(5,3); y = randn(5,3); D1 = stk_dist(x, y, true); % pairwise D2 = stk_dist(x, y); assert(stk_isequal_tolabs(D1, diag(D2))); ***** test x = randn(5,3); D1 = stk_dist(x, [], true); % pairwise assert(stk_isequal_tolabs(D1, zeros(5, 1))); D1 = stk_dist(x, x, true); % pairwise assert(stk_isequal_tolabs(D1, zeros(5, 1))); 13 tests, 13 passed, 0 known failure, 0 skipped [inst/misc/dist/stk_mindist.m] >>>>> /<>/inst/misc/dist/stk_mindist.m ***** test d = 3; x = rand(7, d); md1 = stk_mindist(x); md2 = stk_mindist(stk_dataframe(x)); assert(stk_isequal_tolabs(md1, md2)); ***** test for nc = [0 5 10], x = zeros(0, nc); d = stk_mindist(x); assert(isempty(d)); end ***** test for nc = [0 5 10], x = rand(1, nc); d = stk_mindist(x); assert(isempty(d)); end ***** test for nr = [2 5 10], x = zeros(nr, 0); d = stk_mindist(x); assert(isequal(d, 0.0)); end ***** test nrep = 20; TOL_REL = 1e-15; for irep = 1:nrep, n = 2 + floor(rand * 10); d = 1 + floor(rand * 10); x = rand(n, d); z = stk_mindist(x); assert(isequal(size(d), [1, 1])); assert(~isnan(d)); assert(~isinf(d)); % check the result mindist = Inf; for i = 1:(n-1), for j = (i+1):n, mindist = min(mindist, norm(x(i,:) - x(j,:))); end end assert(abs(z - mindist) <= TOL_REL * mindist); end 5 tests, 5 passed, 0 known failure, 0 skipped [inst/misc/dist/stk_filldist.m] >>>>> /<>/inst/misc/dist/stk_filldist.m ***** test %%% exact d = 3; x = rand(7, d); box = repmat([0; 1], 1, d); fd1 = stk_filldist(x, box); fd2 = stk_filldist(stk_dataframe(x), stk_dataframe(box)); assert(stk_isequal_tolabs(fd1, fd2)); ***** test %%% discretized d = 3; x = rand(7, d); y = rand(20, d); fd1 = stk_filldist(x, y); fd2 = stk_filldist(stk_dataframe(x), stk_dataframe(y)); assert(stk_isequal_tolabs(fd1, fd2)); ***** test n = 5; % must be bigger than 2 for dim = 1:10, x = rand(n, dim); fd = stk_filldist(x, x); assert(stk_isequal_tolabs(fd, 0.0)); end ***** test %%% exact for dim = 1:6, x = 0.5 * ones(1, dim); fd = stk_filldist(x); % [0; 1]^d is the default box assert(stk_isequal_tolabs(fd, 0.5 * sqrt(dim))); end ***** test %%% discretized for dim = 1:6, x = 0.5 * ones(1, dim); y = stk_sampling_regulargrid(2^dim, dim); % [0; 1]^d is the default box fd = stk_filldist(x, y); assert(stk_isequal_tolabs(fd, 0.5 * sqrt(dim))); end ***** test for dim = [1 3 7], box = repmat([1; 2], 1, dim); x = 1 + 0.5 * ones(1, dim); fd = stk_filldist(x, box); assert(stk_isequal_tolabs(fd, 0.5 * sqrt(dim))); end ***** test dim = 3; box = repmat([-1; 1], 1, dim); x = stk_sampling_randunif(20, dim, box); y = stk_sampling_regulargrid(3^dim, dim, box); fd1 = stk_filldist(x, box); fd2 = stk_filldist(x, y); assert(fd1 >= fd2 - 10 * eps); ***** test %%% exact for dim = [1 3 7], x = zeros(1, dim); [fd, ymax] = stk_filldist_exact(x); assert(stk_isequal_tolabs(fd, sqrt(dim))); assert(stk_isequal_tolabs(ymax, ones(1, dim))); end ***** test %%% discretized for dim = [1 3 7], x = zeros(1, dim); y = stk_sampling_regulargrid(3^dim, dim); [fd, ymax] = stk_filldist(x, y); assert(stk_isequal_tolabs(fd, sqrt(dim))); assert(stk_isequal_tolabs(ymax, ones(1, dim))); end 9 tests, 9 passed, 0 known failure, 0 skipped [inst/misc/dist/stk_gpquadform.m] >>>>> /<>/inst/misc/dist/stk_gpquadform.m ***** shared x, y, z, rx, ry, rz x = rand(5, 2); rx = rand(5, 2) + 1; y = rand(6, 2); ry = rand(6, 2) + 1; z = rand(5, 3); rz = rand(5, 3) + 1; ***** error Q = stk_gpquadform(x, ry, y, ry) ***** error Q = stk_gpquadform(x, rz, y, ry) ***** error Q = stk_gpquadform(x, rx, y, rx) ***** error Q = stk_gpquadform(x, rx, y, rz) ***** error Q = stk_gpquadform(x, rx, z, ry) ***** shared x, y, z, rx, ry, rz x = zeros (11, 5); rx = 1/sqrt(2) * ones (11, 5); y = zeros (13, 5); ry = 1/sqrt(2) * ones (13, 5); z = ones ( 7, 5); rz = 1/sqrt(2) * ones ( 7, 5); ***** test Qx = stk_gpquadform(x, [], rx); assert(isequal(Qx, zeros(11))); ***** test Qxx = stk_gpquadform(x, x, rx, rx); assert(isequal(Qxx, zeros(11))); ***** test Qxy = stk_gpquadform(x, y, rx, ry); assert(isequal(Qxy, zeros(11, 13))); ***** test Qzz = stk_gpquadform(z, [], rz); assert(isequal(Qzz, zeros(7))); ***** test Qxz = stk_gpquadform(x, z, rx, rz); assert(stk_isequal_tolabs(Qxz, 5 * ones(11, 7))); ***** test x = randn(5, 3); rx = 1 + rand(5, 3); y = randn(5, 3); ry = 1 + rand(5, 3); Q1 = stk_gpquadform(x, y, rx, ry, true); % pairwise Q2 = stk_gpquadform(x, y, rx, ry, false); assert(isequal(size(Q1), [5 1])); assert(isequal(size(Q2), [5 5])); assert(stk_isequal_tolabs(Q1, diag(Q2))); ***** test x = randn(5, 3); rx = 1 + rand(5, 3); Q1 = stk_gpquadform(x, [], rx, [], true); % pairwise assert(stk_isequal_tolabs(Q1, zeros(5, 1))); Q1 = stk_gpquadform(x, x, rx, rx, true); % pairwise assert(stk_isequal_tolabs(Q1, zeros(5, 1))); ***** shared x, y, z, rx, ry, rz x = zeros (11, 5); rx = 2 * ones (11, 5); y = zeros (13, 5); ry = 2 * ones (13, 5); z = ones ( 7, 5); rz = 2 * ones ( 7, 5); ***** test Qx = stk_gpquadform(x, [], rx); assert(isequal(Qx, zeros(11))); ***** test Qxx = stk_gpquadform(x, x, rx, rx); assert(isequal(Qxx, zeros(11))); ***** test Qxy = stk_gpquadform(x, y, rx, ry); assert(isequal(Qxy, zeros(11, 13))); ***** test Qzz = stk_gpquadform(z, [], rz); assert(isequal(Qzz, zeros(7))); ***** test Qxz = stk_gpquadform(x, z, rx, rz); assert(stk_isequal_tolabs(Qxz, 5/8 * ones(11, 7))); 17 tests, 17 passed, 0 known failure, 0 skipped [inst/misc/dist/stk_filldist_discretized.m] >>>>> /<>/inst/misc/dist/stk_filldist_discretized.m ***** error stk_filldist_discretized(0.0) % incorrect nb of arguments ***** error stk_filldist_discretized(0.0, []) % second arg is empty ***** error stk_filldist_discretized([], 0.0) % first arg is empty ***** test d = 3; x = rand(7, d); y = rand(20, d); fd1 = stk_filldist_discretized(x, y); fd2 = stk_filldist_discretized(stk_dataframe(x), stk_dataframe(y)); assert(stk_isequal_tolabs(fd1, fd2)); ***** test n = 5; for dim = 1:10, x = rand(n, dim); fd = stk_filldist_discretized(x, x); assert(stk_isequal_tolabs(fd, 0.0)); end ***** test for dim = 1:10, x = rand(1, dim); y = rand(1, dim); fd = stk_filldist_discretized(x, y); assert(stk_isequal_tolabs(fd, norm(x - y))); end ***** test n = 4; for dim = 2:10, x = zeros(n, dim); y = rand(1, dim); fd = stk_filldist_discretized(x, y); assert(stk_isequal_tolabs(fd, max(stk_dist(x, y)))); end ***** test for dim = [1 3 6], x = 0.5 * ones(1, dim); y = stk_sampling_regulargrid(2^dim, dim); % [0; 1]^d is the default box fd = stk_filldist_discretized(x, y); assert(stk_isequal_tolabs(fd, 0.5 * sqrt(dim))); end ***** test for dim = [1 3 7], x = zeros(1, dim); y = stk_sampling_regulargrid(3^dim, dim); [fd, ymax] = stk_filldist_discretized(x, y); assert(stk_isequal_tolabs(fd, sqrt(dim))); assert(stk_isequal_tolabs(ymax, ones(1, dim))); end 9 tests, 9 passed, 0 known failure, 0 skipped [inst/misc/dist/stk_filldist_exact.m] >>>>> /<>/inst/misc/dist/stk_filldist_exact.m ***** test d = 3; x = rand(7, d); box = repmat([0; 1], 1, d); fd1 = stk_filldist_exact(x, box); fd2 = stk_filldist_exact(stk_dataframe(x), stk_dataframe(box)); assert(stk_isequal_tolabs(fd1, fd2)); ***** test for dim = 1:6, x = 0.5 * ones(1, dim); fd = stk_filldist_exact(x); % [0; 1]^d is the default box assert(stk_isequal_tolabs(fd, 0.5 * sqrt(dim))); end ***** test for dim = [1 3 7], box = repmat([1; 2], 1, dim); x = 1 + 0.5 * ones(1, dim); fd = stk_filldist_exact(x, box); assert(stk_isequal_tolabs(fd, 0.5 * sqrt(dim))); end ***** test for dim = [1 3 7], x = zeros(1, dim); [fd, ymax] = stk_filldist_exact(x); assert(stk_isequal_tolabs(fd, sqrt(dim))); assert(stk_isequal_tolabs(ymax, ones(1, dim))); end 4 tests, 4 passed, 0 known failure, 0 skipped [inst/model/prior_struct/stk_covmat_noise.m] >>>>> /<>/inst/model/prior_struct/stk_covmat_noise.m ***** shared model, model2, x1, x2, n1, n2, d, Ka, Kb, Kc, Pa, Pb, Pc, P1, P2, P3, K1, K2, K3 n1 = 20; n2 = 10; d = 4; model = stk_model ('stk_materncov52_aniso', d); model.lm = stk_lm_affine; model.param = log ([1.0; 2.1; 2.2; 2.3; 2.4]); model2 = model; model2.lognoisevariance = log(0.01); x1 = stk_sampling_randunif (n1, d); x2 = stk_sampling_randunif (n2, d); ***** error [KK, PP] = stk_covmat_noise (); ***** error [KK, PP] = stk_covmat_noise (model); ***** test [Ka, Pa] = stk_covmat_noise (model, x1); % (1) ***** test [K1, P1] = stk_covmat_noise (model, x1, []); ***** test [K2, P2] = stk_covmat_noise (model, x1, [], -1); ***** test [K3, P3] = stk_covmat_noise (model, x1, [], -1, false); ***** assert (isequal (size (Ka), [n1 n1])); ***** assert (isequal (size (Pa), [n1 0])); ***** assert (isequal (P1, Pa) && (isequal (K1, Ka))) ***** assert (isequal (P2, Pa) && (isequal (K2, Ka))) ***** assert (isequal (P3, Pa) && (isequal (K3, Ka))) ***** test [Kb, Pb] = stk_covmat_noise (model, x1, x1); % (2) ***** test [K1, P1] = stk_covmat_noise (model, x1, x1, -1); ***** test [K2, P2] = stk_covmat_noise (model, x1, x1, -1, false); ***** assert (isequal (size (Kb), [n1 n1])); ***** assert (isequal (size (Pb), [n1 0])); ***** assert (isequal (P1, Pb) && (isequal (K1, Kb))) ***** assert (isequal (P2, Pb) && (isequal (K2, Kb))) ***** test [Kc, Pc] = stk_covmat_noise (model, x1, x2); % (3) ***** test [K1, P1] = stk_covmat_noise (model, x1, x2, -1); ***** test [K2, P2] = stk_covmat_noise (model, x1, x2, -1, false); ***** assert (isequal (size (Kc), [n1 n2])); ***** assert (isequal (size (Pc), [n1 0])); ***** assert (isequal (P1, Pc) && (isequal (K1, Kc))) ***** assert (isequal (P2, Pc) && (isequal (K2, Kc))) ***** assert (isequal (Kb, Ka)); ***** test [Ka, Pa] = stk_covmat_noise (model2, x1); % (1') ***** test [Kb, Pb] = stk_covmat_noise (model2, x1, x1); % (2') ***** error assert (isequal (Kb, Ka)); ***** assert (isequal (Pa, Pb)); ***** assert (isequal (Pa, Pc)); 31 tests, 31 passed, 0 known failure, 0 skipped [inst/model/prior_struct/stk_model.m] >>>>> /<>/inst/model/prior_struct/stk_model.m ***** test model = stk_model(); ***** test model = stk_model('stk_expcov_iso'); ***** test model = stk_model('stk_expcov_iso', 1); ***** test model = stk_model('stk_expcov_iso', 3); ***** test model = stk_model('stk_expcov_aniso'); ***** test model = stk_model('stk_expcov_aniso', 1); ***** test model = stk_model('stk_expcov_aniso', 3); ***** test model = stk_model('stk_materncov_iso'); ***** test model = stk_model('stk_materncov_iso', 1); ***** test model = stk_model('stk_materncov_iso', 3); ***** test model = stk_model('stk_materncov_aniso'); ***** test model = stk_model('stk_materncov_aniso', 1); ***** test model = stk_model('stk_materncov_aniso', 3); ***** test model = stk_model('stk_materncov32_iso'); ***** test model = stk_model('stk_materncov32_iso', 1); ***** test model = stk_model('stk_materncov32_iso', 3); ***** test model = stk_model('stk_materncov32_aniso'); ***** test model = stk_model('stk_materncov32_aniso', 1); ***** test model = stk_model('stk_materncov32_aniso', 3); ***** test model = stk_model('stk_materncov52_iso'); ***** test model = stk_model('stk_materncov52_iso', 1); ***** test model = stk_model('stk_materncov52_iso', 3); ***** test model = stk_model('stk_materncov52_aniso'); ***** test model = stk_model('stk_materncov52_aniso', 1); ***** test model = stk_model('stk_materncov52_aniso', 3); ***** test model = stk_model('stk_gausscov_iso'); ***** test model = stk_model('stk_gausscov_iso', 1); ***** test model = stk_model('stk_gausscov_iso', 3); ***** test model = stk_model('stk_gausscov_aniso'); ***** test model = stk_model('stk_gausscov_aniso', 1); ***** test model = stk_model('stk_gausscov_aniso', 3); ***** test model = stk_model('stk_sphcov_iso'); ***** test model = stk_model('stk_sphcov_iso', 1); ***** test model = stk_model('stk_sphcov_iso', 3); ***** test model = stk_model('stk_sphcov_aniso'); ***** test model = stk_model('stk_sphcov_aniso', 1); ***** test model = stk_model('stk_sphcov_aniso', 3); 37 tests, 37 passed, 0 known failure, 0 skipped [inst/model/prior_struct/stk_ortho_func.m] >>>>> /<>/inst/model/prior_struct/stk_ortho_func.m ***** shared model, x, n, d n = 15; d = 4; model = stk_model ('stk_materncov_aniso', d); x = stk_sampling_randunif (n, d); model = rmfield (model, 'lm'); % Test the old .order approach ***** error P = stk_ortho_func (); ***** error P = stk_ortho_func (model); ***** test P = stk_ortho_func (model, x); ***** test model.order = -1; P = stk_ortho_func (model, x); assert (isequal (size (P), [n, 0])); ***** test model.order = 0; P = stk_ortho_func (model, x); assert (isequal (size (P), [n, 1])); ***** test model.order = 1; P = stk_ortho_func (model, x); assert (isequal (size (P), [n, d + 1])); ***** test model.order = 2; P = stk_ortho_func (model, x); assert (isequal (size (P), [n, 1 + d * (d + 3) / 2])); ***** test model.order = 3; P = stk_ortho_func (model, x); assert (isequal (size (P), [n, 1 + d * (11 + d * (6 + d)) / 6])); ***** error model.order = 4; P = stk_ortho_func (model, x); % model.order > 3 is not allowed 9 tests, 9 passed, 0 known failure, 0 skipped [inst/model/@stk_model_gpposterior/set.m] >>>>> /<>/inst/model/@stk_model_gpposterior/set.m ***** shared M_post x_obs = (linspace (0, pi, 15))'; z_obs = sin (x_obs); M_prior = stk_model ('stk_materncov32_iso'); M_prior.param = log ([1.0; 2.1]); M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); ***** error value = get (M_post, 1.33); ***** error value = get (M_post, 'dudule'); ***** test value = get (M_post, 'prior_model'); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/model/@stk_model_gpposterior/stk_model_update.m] >>>>> /<>/inst/model/@stk_model_gpposterior/stk_model_update.m ***** shared x_obs, z_obs, ref, M_prior, x_new, z_new, lnv_new [x_obs, z_obs, ref] = stk_dataset_twobumps ('noisy2'); M_prior = stk_model ('stk_materncov52_iso'); M_prior.param = [-0.15; 0.38]; M_prior.lognoisevariance = 2 * log (ref.noise_std); x_new = [-0.79; -0.79]; z_new = [-0.69; -0.85]; lnv_new = ref.noise_std_func (x_new); ***** test % heteroscedastic M_prior.lognoisevariance = 2 * log (ref.noise_std); M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); M_post = stk_model_update (M_post, x_new, z_new, lnv_new); ***** error % using lnv_new / homoscedastic M_prior.lognoisevariance = 0; M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); M_post = stk_model_update (M_post, x_new, z_new, lnv_new); % NOT OK ***** error % using lnv_new / noiseless M_prior.lognoisevariance = -inf; M_post = stk_model_gpposterior (M_prior, x_obs, z_obs) M_post = stk_model_update (M_post, x_new, z_new, lnv_new); % NOT OK ***** error % not using lnv_new / heteroscedastic M_prior.lognoisevariance = 2 * log (ref.noise_std); M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); M_post = stk_model_update (M_post, x_new, z_new); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/model/@stk_model_gpposterior/stk_predict.m] >>>>> /<>/inst/model/@stk_model_gpposterior/stk_predict.m ***** shared n, m, M_post, M_prior, x0, x_obs, z_obs, x_prd, y_prd, idx_obs, idx_prd n = 10; % number of observations m = n + 1; % number of predictions d = 1; % dimension of the input space x0 = (linspace (0, pi, n + m))'; idx_obs = (2:2:(n+m-1))'; idx_prd = (1:2:(n+m))'; x_obs = x0(idx_obs); z_obs = sin (x_obs); x_prd = x0(idx_prd); M_prior = stk_model ('stk_materncov32_iso'); M_prior.param = log ([1.0; 2.1]); M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); ***** error y_prd = stk_predict (M_post); ***** test y_prd = stk_predict (M_post, x_prd); ***** error y_prd = stk_predict (M_post, [x_prd x_prd]); ***** test % nargout = 2 [y_prd1, lambda] = stk_predict (M_post, x_prd); assert (stk_isequal_tolrel (y_prd, y_prd1)); assert (isequal (size (lambda), [n m])); ***** test % nargout = 3 [y_prd1, lambda, mu] = stk_predict (M_post, x_prd); assert (stk_isequal_tolrel (y_prd, y_prd1)); assert (isequal (size (lambda), [n m])); assert (isequal (size (mu), [1 m])); % ordinary kriging ***** test % nargout = 4 [y_prd1, lambda, mu, K] = stk_predict (M_post, x_prd); assert (stk_isequal_tolrel (y_prd, y_prd1)); assert (isequal (size (lambda), [n m])); assert (isequal (size (mu), [1 m])); % ordinary kriging assert (isequal (size (K), [m m])); ***** test % nargout = 2, compute only variances M_post1 = stk_model_gpposterior (M_prior, x_obs, []); [y_prd_nan, lambda] = stk_predict (M_post1, x_prd); assert (isequal (size (lambda), [n m])); assert (all (isnan (y_prd_nan.mean))); ***** test % discrete model (prediction indices provided) M_prior1 = stk_model ('stk_discretecov', M_prior, x0); M_post1 = stk_model_gpposterior (M_prior1, idx_obs, z_obs); y_prd1 = stk_predict (M_post1, idx_prd); assert (stk_isequal_tolrel (y_prd, y_prd1)); ***** test % discrete model (prediction indices *not* provided) M_prior1 = stk_model ('stk_discretecov', M_prior, x0); M_post1 = stk_model_gpposterior (M_prior1, idx_obs, z_obs); y_prd1 = stk_predict (M_post1, []); % predict them all! assert (stk_isequal_tolrel (y_prd, y_prd1(idx_prd, :))); 9 tests, 9 passed, 0 known failure, 0 skipped [inst/model/@stk_model_gpposterior/stk_model_gpposterior.m] >>>>> /<>/inst/model/@stk_model_gpposterior/stk_model_gpposterior.m ***** test stk_test_class ('stk_model_gpposterior') ***** shared M_prior, x_obs, z_obs x_obs = (linspace (0, pi, 15))'; z_obs = sin (x_obs); M_prior = stk_model ('stk_materncov32_iso'); M_prior.param = log ([1.0; 2.1]); ***** test M_post = stk_model_gpposterior (); ***** test M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); ***** error M_post = stk_model_gpposterior (M_prior, x_obs, [z_obs; z_obs]); ***** error M_post = stk_model_gpposterior (M_prior, x_obs, [z_obs; z_obs], 3.441); ***** test % hidden feature kreq = stk_kreq_qr (M_prior, x_obs); M_post = stk_model_gpposterior (M_prior, {x_obs, kreq}, z_obs); ***** test % NaNs in prior_model.param DIM = 1; M = stk_model (@stk_materncov52_aniso, DIM); M.param = nan (2, 1); % this is currently the default x = stk_sampling_regulargrid (20, DIM, [0; 1]); y = sin (double (x)); zp = stk_predict (M, x, y, x); 7 tests, 7 passed, 0 known failure, 0 skipped [inst/model/@stk_model_gpposterior/stk_predict_leaveoneout.m] >>>>> /<>/inst/model/@stk_model_gpposterior/stk_predict_leaveoneout.m ***** test % Check virtual Leave-One-Out formula n = 20; d = 1; x_obs = stk_sampling_regulargrid (n, d, [0; 2*pi]); z_obs = stk_feval (@sin, x_obs); lm_list = {stk_lm_null, stk_lm_constant, stk_lm_affine}; for j = 0:2 for k = 1:(length (lm_list)) model = stk_model ('stk_materncov32_iso', d); model.lm = lm_list{k}; model.param = log ([1; 5]); switch j % test various scenarios for lognoisevariance case 0 model.lognoisevariance = -inf; case 1 model.lognoisevariance = 0; case 2 model.lognoisevariance = (1 + rand (n, 1)) * 1e-3; end M_post = stk_model_gpposterior (model, x_obs, z_obs); [loo_pred, loo_res] = stk_predict_leaveoneout (M_post); [direct_pred, direct_res] = stk_predict_leaveoneout_direct (M_post); assert (stk_isequal_tolrel (loo_pred, direct_pred)); assert (stk_isequal_tolrel (loo_res, direct_res)); end end 1 test, 1 passed, 0 known failure, 0 skipped [inst/model/@stk_model_gpposterior/get.m] >>>>> /<>/inst/model/@stk_model_gpposterior/get.m ***** shared M_post x_obs = (linspace (0, pi, 15))'; z_obs = sin (x_obs); M_prior = stk_model ('stk_materncov32_iso'); M_prior.param = log ([1.0; 2.1]); M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); ***** error value = get (M_post, 1.33); ***** error value = get (M_post, 'dudule'); ***** test value = get (M_post, 'prior_model'); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/model/noise/@stk_gaussiannoise_het0/set.m] >>>>> /<>/inst/model/noise/@stk_gaussiannoise_het0/set.m ***** shared M_post x_obs = (linspace (0, pi, 15))'; z_obs = sin (x_obs); M_prior = stk_model ('stk_materncov32_iso'); M_prior.param = log ([1.0; 2.1]); M_post = stk_model_gpposterior (M_prior, x_obs, z_obs); ***** error value = get (M_post, 1.33); ***** error value = get (M_post, 'dudule'); ***** test value = get (M_post, 'prior_model'); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/sampling/stk_halfpintl.m] >>>>> /<>/inst/sampling/stk_halfpintl.m ***** test % case #1 a = 1; b = 1; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (a_out == 1) assert (b_out == 1) assert (isempty (z_out)) ***** test % case #2: two lines, slopes not equal, already sorted a = [1; -1]; b = [0; 2]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (isequal (a_out, [1; -1])) assert (isequal (b_out, [0; 2])) assert (z_out == 1) ***** test % case #3: same as #2, but not sorted a = [-1; 1]; b = [ 2; 0]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (isequal (a_out, [1; -1])) assert (isequal (b_out, [0; 2])) assert (z_out == 1) ***** test % case #4: two lines, equal slopes, already sorted a = [0; 0]; b = [1; 2]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (a_out == 0) assert (b_out == 1) assert (isempty (z_out)) ***** test % case #5: same as #4, but not sorted a = [0; 0]; b = [2; 1]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (a_out == 0) assert (b_out == 1) assert (isempty (z_out)) ***** test % case #6: add a dominated line to #2 (the result does not change) a = [1; -1; 0]; b = [0; 2; 1]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (isequal (a_out, [1; -1])) assert (isequal (b_out, [0; 2])) assert (z_out == 1) ***** test % case #7: permutation of #6 a = [1; 0; -1]; b = [0; 1; 2]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (isequal (a_out, [1; -1])) assert (isequal (b_out, [0; 2])) assert (z_out == 1) ***** test % case #8: another permutation of #6 a = [0; 1; -1]; b = [1; 0; 2]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (isequal (a_out, [1; -1])) assert (isequal (b_out, [0; 2])) assert (z_out == 1) ***** test % case #9: same as #8, with some duplicated lines added a = [0; 1; 0; -1; 0; -1; 1]; b = [1; 0; 1; 2; 1; 2; 0]; [a_out, b_out, z_out] = stk_halfpintl (a, b); assert (isequal (a_out, [1; -1])) assert (isequal (b_out, [0; 2])) assert (z_out == 1) 9 tests, 9 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_olhs.m] >>>>> /<>/inst/sampling/stk_sampling_olhs.m ***** shared x, n, d, box, permut n = 5; d = 2; box = [0 0; 1, 1]; permut = 1:2; ***** error x = stk_sampling_olhs(); ***** test x = stk_sampling_olhs(n); ***** test x = stk_sampling_olhs(n, d); ***** test x = stk_sampling_olhs(n, d, box); ***** test x = stk_sampling_olhs(n, d, box, permut); ***** error x = stk_sampling_olhs(n, d, box, permut, pi); ***** assert (isa (x, 'stk_dataframe')); ***** assert (isequal (x.colnames, {})); ***** test cn = {'W', 'H'}; box = stk_hrect (box, cn); x = stk_sampling_olhs (n, d, box); assert (isequal (x.colnames, cn)); ***** test for r = 1:5 n = 2 ^ (r + 1) + 1; d = 2 * r; x = stk_sampling_olhs (n, d); assert (isequal (size (x), [n d])); box = repmat ([-1; 1], 1, d); assert (stk_is_lhs (x, n, d, box)); x = double (x); w = x' * x; assert (stk_isequal_tolabs (w / w(1,1), eye (d))); end 10 tests, 10 passed, 0 known failure, 0 skipped [inst/sampling/@stk_sampcrit_ei/stk_sampcrit_ei.m] >>>>> /<>/inst/sampling/@stk_sampcrit_ei/stk_sampcrit_ei.m ***** shared F, M, EI M = stk_model_gpposterior (stk_model, [1 2 3]', [1.234 3 2]'); ***** test F = stk_sampcrit_ei () % ending ";" omitted on purpose, to test disp F = | | model: -- (not instantiated) | current_minimum: Inf | ***** assert (isempty (F.model)) ***** assert (isempty (get (F, 'model'))) ***** assert (F.current_minimum == +inf) ***** assert (get (F, 'current_minimum') == +inf) ***** error F.toto ***** error get (F, 'toto') ***** error F.current_min = 1.234; % read-only ***** error F = set (F, 'current_min', 1.234); % read-only ***** error F.toto = 1.234; % field does not exist ***** error F = set (F, 'toto', 1.234); % field does not exist ***** error EI = feval (F, 1.0); ***** test F = stk_sampcrit_ei (); F.model = M; assert (~ isempty (F.model)); ***** test F = stk_sampcrit_ei (); F = set (F, 'model', M); assert (~ isempty (F.model)); ***** test F.model = []; % remove model assert (isempty (F.model)); assert (F.current_minimum == +inf); ***** test F = stk_sampcrit_ei (M) % ending ";" omitted on purpose, to test disp F = | | model: | current_minimum: 1.234 | ***** assert (isequal (F.model, M)) ***** assert (F.current_minimum == 1.234); ***** test EI = feval (F, [1.0; 1.1; 1.2]); ***** assert (isequal (size (EI), [3 1])) ***** assert (all (EI >= 0)) ***** shared F ***** test F = stk_sampcrit_ei (stk_model ()); ***** assert (F.current_minimum == +inf); ***** error feval (F, 1.0); 24 tests, 24 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_regulargrid.m] >>>>> /<>/inst/sampling/stk_sampling_regulargrid.m ***** shared x, n, dim, box n = 9; dim = 2; box = [0, 0; 1, 1]; ***** error x = stk_sampling_regulargrid (); ***** test x = stk_sampling_regulargrid (n); ***** test x = stk_sampling_regulargrid (n, dim); ***** test x = stk_sampling_regulargrid (n, dim, box); ***** assert (isa (x, 'stk_dataframe')); ***** assert (isa (x, 'stk_factorialdesign')); ***** assert (isequal (x.colnames, {})); ***** test cn = {'W', 'H'}; box = stk_hrect (box, cn); x = stk_sampling_regulargrid (n, dim, box); assert (isequal (x.colnames, cn)); ***** test for dim = 1:3, n = 3^dim; x = stk_sampling_regulargrid(n, dim); assert(isequal(size(x), [n dim])); u = double(x); u = u(:); assert(~any(isnan(u) | isinf(u))); assert((min(u) >= 0) && (max(u) <= 1)); end ***** test nn = [3 4 5]; for dim = 1:3, x = stk_sampling_regulargrid(nn(1:dim), dim); assert(isequal(size(x), [prod(nn(1:dim)) dim])); u = double(x); u = u(:); assert(~any(isnan(u) | isinf(u))); assert((min(u) >= 0) && (max(u) <= 1)); end 10 tests, 10 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_randomlhs.m] >>>>> /<>/inst/sampling/stk_sampling_randomlhs.m ***** shared x, n, dim, box n = 10; dim = 2; box = [0, 0; 1, 1]; ***** error x = stk_sampling_randomlhs (); ***** test x = stk_sampling_randomlhs (n); ***** test x = stk_sampling_randomlhs (n, dim); ***** test x = stk_sampling_randomlhs (n, dim, box); ***** assert (isa(x, 'stk_dataframe')); ***** assert (isequal (x.colnames, {})); ***** test cn = {'W', 'H'}; box = stk_hrect (box, cn); x = stk_sampling_randomlhs (n, dim, box); assert (isequal (x.colnames, cn)); ***** test for dim = 1:5, x = stk_sampling_randomlhs(n, dim); assert(isequal(size(x), [n dim])); u = double(x); u = u(:); assert(~any(isnan(u) | isinf(u))); assert((min(u) >= 0) && (max(u) <= 1)); assert(stk_is_lhs(x, n, dim)); end 8 tests, 8 passed, 0 known failure, 0 skipped [inst/sampling/@stk_function/stk_function.m] >>>>> /<>/inst/sampling/@stk_function/stk_function.m ***** shared F ***** test F = stk_function () % ending ";" omitted on purpose, to test disp F = ***** error [F F]; % arrays of sampling criterion objects are not supported ***** error [F; F]; % idem ***** error get (F, 'toto'); % field does not exist ***** error y = feval (F, 1.0); % not implemented for "pure" function objects ***** error dummy = F{2}; % illegal indexing ***** error dummy = F(1.0); % feval not implemented ***** error dummy = F.toto; % field does not exist ***** error F{2} = 1.234; % illegal indexing ***** error F(5) = 1.234; % illegal indexing ***** error F.toto = 1.234; % field does not exist 11 tests, 11 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_nesteddesign.m] >>>>> /<>/inst/sampling/stk_sampling_nesteddesign.m ***** shared x, n, dim, box, niter, levels n = [23; 14; 5; 2]; dim = 2; box = [0, 0; 4, 4]; niter = 10; levels = [10.1; 15.2; -9.3; 2.4; 17.5]; ***** error x = stk_sampling_nesteddesign (); ***** test x = stk_sampling_nesteddesign (n); ***** test x = stk_sampling_nesteddesign (n, dim); ***** test x = stk_sampling_nesteddesign (n, dim, box); ***** test x = stk_sampling_nesteddesign (n, dim, box, niter); ***** test x = stk_sampling_nesteddesign (n, dim, box, niter, levels); ***** assert ( isequal(size(x), [sum(n), dim + 1]) ); ***** assert ( isa(x, 'stk_dataframe') ); cn = [0; cumsum(n)]; for lev = 1:length(n), y = x( (cn(lev) + 1):(cn(lev + 1)), 1:dim ); assert (isequal (size (y), [n(lev) dim])); if lev > 1 assert ( isequal(z((end - n(lev) + 1):end, :), y) ); end if lev == length(n) assert (stk_is_lhs (y, n(lev), dim, box)); end z = y; end ***** assert (isequal (x.colnames{dim + 1}, 'Level')); levels = stk_dataframe(levels, {'t'}); box = stk_hrect(box, {'x1', 'x2', 'x3', 'x4'}); ***** test x = stk_sampling_nesteddesign (n, [], box, [], levels); ***** assert (isequal(x.colnames, {'x1', 'x2', 'x3', 'x4', 't'}) ); 11 tests, 11 passed, 0 known failure, 0 skipped [inst/sampling/@stk_sampcrit_akg/stk_sampcrit_akg.m] >>>>> /<>/inst/sampling/@stk_sampcrit_akg/stk_sampcrit_akg.m ***** shared F, M, AKG M = stk_model_gpposterior (stk_model, [1 2 3]', [1.234 3 2]'); ***** test F = stk_sampcrit_akg () % ending ";" omitted on purpose, to test disp F = | | model: -- (not instantiated) | reference_grid: -- (use current evaluation points) | ***** assert (isempty (F.model)) ***** assert (isempty (get (F, 'model'))) ***** assert (isempty (F.reference_grid)) ***** assert (isempty (get (F, 'reference_grid'))) ***** error F.toto ***** error get (F, 'toto') ***** error F.toto = 1.234; % field does not exist ***** error F = set (F, 'toto', 1.234); % field does not exist ***** error AKG = feval (F, 1.0); ***** test F = stk_sampcrit_akg (); F.model = M; assert (isequal (F.model, M)); ***** test F = stk_sampcrit_akg (); F = set (F, 'model', M); assert (isequal (F.model, M)); assert (isequal (size (F.zr_mean), [3 1])) % n x 1 assert (isequal (size (F.zr_std), [3 1])) % n x 1 assert (isequal (size (F.zr_lambdamu), [4 3])) % (n+1) x n (constant mean) ***** test F.model = []; % remove model assert (isempty (F.model)); assert (isempty (F.zr_mean)) assert (isempty (F.zr_std)) assert (isempty (F.zr_lambdamu)) ***** test xr = [1 1.5 2 2.5 3]'; F.reference_grid = xr % ending ";" omitted on purpose, to test disp assert (isequal (F.reference_grid, xr)) assert (isempty (F.zr_mean)) assert (isempty (F.zr_std)) assert (isempty (F.zr_lambdamu)) F = | | model: -- (not instantiated) | reference_grid: <5x1 double array> | ***** test F.reference_grid = []; assert (isempty (F.reference_grid)) ***** test F = stk_sampcrit_akg (); F.model = M; assert (isequal (F.model, M)); xr = [1 1.5 2 2.5 3]'; F.reference_grid = xr % ending ";" omitted on purpose, to test disp assert (isequal (F.reference_grid, xr)) assert (isequal (size (F.zr_mean), [5 1])) % nr x 1 assert (isequal (size (F.zr_std), [5 1])) % nr x 1 assert (isequal (size (F.zr_lambdamu), [4 5])) % (n+1) x nr (constant mean) F = | | model: | reference_grid: <5x1 double array> | ***** test F.reference_grid = []; assert (isempty (F.reference_grid)) ***** test F = stk_sampcrit_akg (M) % ending ";" omitted on purpose, to test disp F = | | model: | reference_grid: -- (use current evaluation points) | ***** assert (isequal (F.model, M)) ***** test AKG = feval (F, [1.0; 1.1; 1.2]); ***** assert (isequal (size (AKG), [3 1])) ***** assert (all (AKG >= 0)) ***** test [AKG2, zp] = feval (F, [1.0; 1.1; 1.2]); assert (isequal (AKG2, AKG)); assert (isa (zp, 'stk_dataframe') && isequal (size (zp), [3 2])) ***** shared F, xr xr = [1 1.5 2 2.5 3]'; ***** test F = stk_sampcrit_akg (stk_model ()); ***** assert (isempty (F.reference_grid)) ***** test F.reference_grid = xr; ***** assert (isequal (F.reference_grid, xr)) ***** assert (isempty (F.zr_mean)) ***** assert (isempty (F.zr_std)) ***** assert (isempty (F.zr_lambdamu)) ***** error AKG = feval (F, 1.0); ***** shared F, M, xr xr = [1 1.5 2 2.5 3]'; M = stk_model_gpposterior (stk_model, [1 2 3]', [1.234 3 2]'); ***** test F = stk_sampcrit_akg (M, xr); ***** assert (isequal (F.model, M)) ***** assert (isequal (F.reference_grid, xr)) ***** assert (isequal (size (F.zr_mean), [5 1])) % nr x 1 ***** assert (isequal (size (F.zr_std), [5 1])) % nr x 1 ***** assert (isequal (size (F.zr_lambdamu), [4 5])) % (n+1) x nr (constant mean) 37 tests, 37 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_vdc_rr2.m] >>>>> /<>/inst/sampling/stk_sampling_vdc_rr2.m ***** error __stk_sampling_vdc_rr2__() % two inputs required ***** error __stk_sampling_vdc_rr2__(10) % two inputs required ***** error __stk_sampling_vdc_rr2__(10, 3, -1) % two inputs required ***** test n = 300; j = 25; x = __stk_sampling_vdc_rr2__(n, j); assert(isequal(size(x), [n 1])) ***** test x = __stk_sampling_vdc_rr2__(2000, 7); y = double (x(1998:2000, :)); yref = [0.849786281294525; 0.085080398941584; 0.555668634235701]; assert(stk_isequal_tolrel(y, yref, 1e-13)); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampcrit_ei_eval.m] >>>>> /<>/inst/sampling/stk_sampcrit_ei_eval.m ***** error EI = stk_sampcrit_ei_eval () % not enough args ***** error EI = stk_sampcrit_ei_eval (0) % not enough args ***** shared xi, zi, M_prior, xt, zp, EIref, EI1, EI2, EI3 xi = [0; 0.2; 0.7; 0.9]; zi = [1; 0.9; 0.6; 0.1]; M_prior = stk_model('stk_materncov32_iso'); M_prior.param = log ([1.0; 2.1]); xt = stk_sampling_regulargrid (20, 1, [0; 1]); zp = stk_predict (M_prior, xi, zi, xt); EIref = stk_distrib_normal_ei (min (zi), zp.mean, sqrt (zp.var), true); ***** test % Current syntax (STK 2.4.1 and later) EI1 = stk_sampcrit_ei_eval (zp.mean, sqrt (zp.var), min (zi)); ***** assert (isequal (EI1, EIref)) 4 tests, 4 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_maximinlhs.m] >>>>> /<>/inst/sampling/stk_sampling_maximinlhs.m ***** shared x, n, dim, box, niter n = 20; dim = 2; box = [0, 0; 1, 1]; niter = 1; ***** error x = stk_sampling_maximinlhs (); ***** test x = stk_sampling_maximinlhs (n); ***** test x = stk_sampling_maximinlhs (n, dim); ***** test x = stk_sampling_maximinlhs (n, dim, box); ***** test x = stk_sampling_maximinlhs (n, dim, box, niter); ***** assert (isa (x, 'stk_dataframe')); ***** assert (isequal (x.colnames, {})); ***** test cn = {'W', 'H'}; box = stk_hrect (box, cn); x = stk_sampling_maximinlhs (n, dim, box); assert (isequal (x.colnames, cn)); ***** test for dim = 1:5, x = stk_sampling_randomlhs (n, dim); assert (isequal (size (x), [n dim])); u = double (x); u = u(:); assert (~ any (isnan (u) | isinf (u))); assert ((min (u) >= 0) && (max (u) <= 1)); assert (stk_is_lhs (x, n, dim)); end 9 tests, 9 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_halton_rr2.m] >>>>> /<>/inst/sampling/stk_sampling_halton_rr2.m ***** error stk_sampling_halton_rr2 () % nargin < 1 ***** test n = 300; d = 25; x = stk_sampling_halton_rr2 (n, d); assert (isequal (size (x), [n d])) ***** test x = stk_sampling_halton_rr2 (1000, 3); y = double (x(end, :)); yref = [0.9052734375 0.028349336991312 0.74848]; assert (stk_isequal_tolrel (y, yref, 1e-13)); ***** test dim = 2; box = stk_hrect (dim); x = stk_sampling_halton_rr2 (5, dim, box); assert (isequal (x.colnames, {})); ***** test dim = 2; cn = {'W', 'H'}; box = stk_hrect (dim, cn); x = stk_sampling_halton_rr2 (5, dim, box); assert (isequal (x.colnames, cn)); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_randunif.m] >>>>> /<>/inst/sampling/stk_sampling_randunif.m ***** shared x, n, dim, box n = 10; dim = 2; box = [0, 0; 2, 2]; ***** error x = stk_sampling_randunif (); ***** test x = stk_sampling_randunif (n); ***** test x = stk_sampling_randunif (n, dim); ***** test x = stk_sampling_randunif (n, dim, box); ***** assert (isa(x, 'stk_dataframe')); ***** assert (isequal (x.colnames, {})); ***** test cn = {'W', 'H'}; box = stk_hrect (box, cn); x = stk_sampling_randunif (n, dim, box); assert (isequal (x.colnames, cn)); ***** test for dim = 1:5, x = stk_sampling_randunif(n, dim); assert(isequal(size(x), [n dim])); u = double(x); u = u(:); assert(~any(isnan(u) | isinf(u))); assert((min(u) >= 0) && (max(u) <= 1)); end 8 tests, 8 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampling_nestedlhs.m] >>>>> /<>/inst/sampling/stk_sampling_nestedlhs.m ***** shared x, n, dim, box, niter, levels n = [48; 12; 4; 2]; dim = 2; box = [0, 0; 4, 4]; niter = 10; levels = [10.1; 15.2; -9.3; 2.4; 17.5]; ***** error x = stk_sampling_nestedlhs (); ***** test x = stk_sampling_nestedlhs (n); ***** test x = stk_sampling_nestedlhs (n, dim); ***** test x = stk_sampling_nestedlhs (n, dim, box); ***** test x = stk_sampling_nestedlhs (n, dim, box, niter); ***** test x = stk_sampling_nestedlhs (n, dim, box, niter, levels); ***** assert ( isequal(size(x), [sum(n), dim + 1]) ); ***** assert ( isa(x, 'stk_dataframe') ); cn = [0; cumsum(n)]; for lev = 1:length(n), y = x( (cn(lev) + 1):(cn(lev + 1)), 1:dim ); assert (isequal (size (y), [n(lev) dim])); assert (stk_is_lhs (y, n(lev), dim, box)); if lev > 1 assert ( isequal(z((end - n(lev) + 1):end, :), y) ); end z = y; end ***** assert (isequal (x.colnames{dim + 1}, 'Level')); levels = stk_dataframe(levels, {'t'}); box = stk_hrect(box, {'x1', 'x2', 'x3', 'x4'}); ***** test x = stk_sampling_nestedlhs (n, [], box, [], levels); ***** assert (isequal(x.colnames, {'x1', 'x2', 'x3', 'x4', 't'}) ); 11 tests, 11 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampcrit_akg_eval.m] >>>>> /<>/inst/sampling/stk_sampcrit_akg_eval.m ***** shared zc_mean, zc_std, zr_mean, zr_std, zcr_cov, AKG, nc xi = [0; 0.2; 0.7; 0.9]; zi = [1; 0.9; 0.6; 0.1] - 10; ni = 4; M_prior = stk_model('stk_materncov32_iso'); M_prior.param = log ([1.0; 2.1]); M_prior.lognoisevariance = 0.678; nc = 20; xc = stk_sampling_regulargrid (nc, 1, [0; 1]); [zp, ignd1, ignd2, K] = stk_predict (M_prior, xi, zi, [xi; xc]); % See CG#07 ir = 1:ni; ic = ni + (1:nc); zc_mean = zp.mean(ic); zc_std = sqrt (zp.var(ic)); % reference grid: current evaluation points ("KGCP") zr_mean = zp.mean(ir); zr_std = sqrt (zp.var(ir)); zcr_cov = K(ic, ir); ***** test AKG = stk_sampcrit_akg_eval (zc_mean, zc_std, zr_mean, zr_std, zcr_cov); ***** assert (isequal (size (AKG), [nc 1])) ***** assert (all (AKG >= 0)) ***** error AKG = stk_sampcrit_akg_eval (zc_mean, zc_std, zr_mean, zr_std); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/sampling/@stk_sampcrit_eqi/stk_sampcrit_eqi.m] >>>>> /<>/inst/sampling/@stk_sampcrit_eqi/stk_sampcrit_eqi.m ***** shared F, M, EQI M = stk_model_gpposterior (stk_model, [1 2 3]', [1.234 3 2]'); ***** test F = stk_sampcrit_eqi () % ending ";" omitted on purpose, to test disp F = | | model: -- (not instantiated) | quantile_order: 0.5 | point_batch_size: 1 | current_minimum: Inf | ***** assert (isempty (F.model)) ***** assert (isempty (get (F, 'model'))) ***** assert (F.quantile_order == 0.5) ***** assert (get (F, 'quantile_order') == 0.5) ***** assert (F.current_minimum == +inf) ***** assert (get (F, 'current_minimum') == +inf) ***** error F.toto ***** error get (F, 'toto') ***** error F.current_min = 1.234; % read-only ***** error F = set (F, 'current_min', 1.234); % read-only ***** error F.toto = 1.234; % field does not exist ***** error F = set (F, 'toto', 1.234); % field does not exist ***** test F.quantile_order = 0.9; assert (F.quantile_order == 0.9) ***** test F = set (F, 'quantile_order', 0.8); assert (F.quantile_order == 0.8) ***** error F.quantile_order = 1.1; ***** error F.quantile_order = -0.1; ***** error F.quantile_order = [1 2]; ***** error F.current_minimum = 3.333; % read-only ***** error F.quantile_value = 2.222; % read-only ***** error EQI = feval (F, 1.0); ***** test F = stk_sampcrit_eqi (); F.model = M; assert (~ isempty (F.model)); ***** test F = stk_sampcrit_eqi (); F = set (F, 'model', M); assert (~ isempty (F.model)); ***** test F.model = []; % remove model assert (isempty (F.model)); assert (F.current_minimum == +inf); ***** test F = stk_sampcrit_eqi (M) % ending ";" omitted on purpose, to test disp F = | | model: | quantile_order: 0.5 | point_batch_size: 1 | current_minimum: 1.234 | ***** assert (isequal (F.model, M)) ***** assert (stk_isequal_tolrel (F.current_minimum, 1.234, 10 * eps)); ***** test EQI = feval (F, [1.0; 1.1; 1.2]); ***** assert (isequal (size (EQI), [3 1])) ***** assert (all (EQI >= 0)) ***** test F.quantile_order = 0.9; assert (F.quantile_order == 0.9) ***** shared F, M, EQI prior_model = stk_model (); prior_model.lognoisevariance = 0.678; M = stk_model_gpposterior (prior_model, [1 2 3]', [1.234 3 2]'); ***** test F = stk_sampcrit_eqi (M); ***** assert (isequal (F.model, M)) ***** assert (stk_isequal_tolrel (F.current_minimum, 2.077997, 1e-5)); ***** test EQI = feval (F, [1.0; 1.1; 1.2]); ***** assert (isequal (size (EQI), [3 1])) ***** assert (all (EQI >= 0)) ***** test F.quantile_order = 0.9; assert (F.quantile_order == 0.9) ***** shared F ***** test F = stk_sampcrit_eqi (stk_model ()); ***** assert (F.current_minimum == +inf); ***** error feval (F, 1.0); ***** shared F, M M = stk_model_gpposterior (stk_model (), [1 2 3]', [1.234 3 2]'); ***** error F = stk_sampcrit_eqi (M, [], 0); ***** error F = stk_sampcrit_eqi (M, [], 1.5); ***** error F = stk_sampcrit_eqi (M, [], nan); ***** error F = stk_sampcrit_eqi (M, [], [10 20]); ***** test F = stk_sampcrit_eqi (M, [], 10); ***** assert (isequal (F.quantile_order, 0.5)); ***** assert (isequal (F.point_batch_size, 10)); ***** error F = stk_sampcrit_eqi (M, 0.8, 0); ***** error F = stk_sampcrit_eqi (M, 0.8, 1.5); ***** error F = stk_sampcrit_eqi (M, 0.8, nan); ***** error F = stk_sampcrit_eqi (M, 0.8, [10 20]); ***** test F = stk_sampcrit_eqi (M, 0.8, 5); ***** assert (isequal (F.quantile_order, 0.8)); ***** assert (isequal (F.point_batch_size, 5)); ***** shared F, M, EQI prior_model = stk_model (); prior_model.lognoisevariance = 0.678; M = stk_model_gpposterior (prior_model, [1 2 3]', [1.234 3 2]'); F = stk_sampcrit_eqi (M); ***** test F.point_batch_size = 10; % numeric ***** assert (isequal (F.point_batch_size, 10)) ***** test EQI = feval (F, [1.0; 1.1; 1.2]); ***** test F.point_batch_size = @(x, n) 100 - n; % function handle ***** assert (isa (F.point_batch_size, 'function_handle')) ***** test EQI = feval (F, [1.0; 1.1; 1.2]); ***** test F.point_batch_size = 'sin'; % char ***** assert (isa (F.point_batch_size, 'function_handle')) 63 tests, 63 passed, 0 known failure, 0 skipped [inst/sampling/stk_sampcrit_ehvi_eval.m] >>>>> /<>/inst/sampling/stk_sampcrit_ehvi_eval.m ***** shared zr, zi zr = [1 1]; zi = [0.25 0.75; 0.5 0.5; 0.75 0.25]; ***** test % no improvement (1 computation) zp_mean = [0.6 0.6]; zp_std = [0 0]; EHVI = stk_sampcrit_ehvi_eval (zp_mean, zp_std, zi, zr); assert (stk_isequal_tolabs (EHVI, 0, 1e-12)); ***** test % guaranteed improvement (1 computation) zp_mean = [0 0]; zp_std = [0 0]; EHVI = stk_sampcrit_ehvi_eval (zp_mean, zp_std, zi, zr); assert (stk_isequal_tolabs (EHVI, 10 * 0.25 ^ 2)); ***** test % no improvement again (2 computations) zp_mean = [0.5 0.5; 0.6 0.6]; zp_std = [0 0; 0 0]; EHVI = stk_sampcrit_ehvi_eval (zp_mean, zp_std, zi, zr); assert (stk_isequal_tolabs (EHVI, [0; 0], 1e-12)); ***** test % no observation -> EHVI wrt zr zp_mean = [0.6 0.6]; zp_std = 0.01 * [1 1]; zi = []; EHVI = stk_sampcrit_ehvi_eval (zp_mean, zp_std, zi, zr); assert (stk_isequal_tolabs (EHVI, (1 - 0.6)^2, 1e-12)); ***** test % no observation below zr -> EHVI wrt zr zp_mean = [0.6 0.6]; zp_std = 0.01 * [1 1]; zi = [2 2]; EHVI = stk_sampcrit_ehvi_eval (zp_mean, zp_std, zi, zr); assert (stk_isequal_tolabs (EHVI, (1 - 0.6)^2, 1e-12)); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/stk_normalize.m] >>>>> /<>/inst/arrays/@stk_hrect/stk_normalize.m ***** shared x, box, y1, y2, y3, y4 n = 5; box = stk_hrect ([2; 3]); x = 2 + rand (n, 1); ***** error y1 = stk_normalize (); ***** test y2 = stk_normalize (x); ***** test y3 = stk_normalize (x, box); ***** test assert (~ any ((y2 < -10 * eps) | (y2 > 1 + 10 * eps))); ***** test assert (~ any ((y3 < -10 * eps) | (y3 > 1 + 10 * eps))); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/vertcat.m] >>>>> /<>/inst/arrays/@stk_hrect/vertcat.m ***** shared d, x, y d = 10; x = stk_hrect (d); y = double (x); ***** test z = vertcat (x, x); assert (isequal (size (z), [4 d])); assert (strcmp (class (z), 'stk_dataframe')); ***** test z = vertcat (x, y); assert (isequal (size (z), [4 d])); assert (strcmp (class (z), 'stk_dataframe')); ***** test z = vertcat (y, x); assert (isequal (size (z), [4 d])); assert (strcmp (class (z), 'stk_dataframe')); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/horzcat.m] >>>>> /<>/inst/arrays/@stk_hrect/horzcat.m ***** shared d, x1, x2, x3 d = 10; x1 = stk_hrect (d); x2 = double (x1); x3 = [1:d; 0:(d-1)]; % illegal bounds ***** test y1 = horzcat (x1, x1); assert (isequal (size (y1), [2 2*d])); assert (strcmp (class (y1), 'stk_hrect')); ***** test y2 = horzcat (x1, x2); assert (isequal (size (y2), [2 2*d])); assert (strcmp (class (y2), 'stk_hrect')); ***** test y3 = horzcat (x2, x1); assert (isequal (size (y3), [2 2*d])); assert (strcmp (class (y3), 'stk_hrect')); ***** test lastwarn ('') y4 = horzcat (x1, x3); assert (isequal (size (y4), [2 2*d])); assert (strcmp (class (y4), 'stk_dataframe')); [warn_msg, warn_id] = lastwarn (); assert (strcmp (warn_id, 'STK:stk_hrect:horzcat:IllegalBounds')) warning: Illegal bounds, the result is not an stk_hrect object. 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/ismember.m] >>>>> /<>/inst/arrays/@stk_hrect/ismember.m ***** shared n, box n = 5; box = stk_hrect (n); ***** assert (ismember (box(1, :), box)) ***** assert (ismember (box(2, :), box)) ***** assert (ismember (.5 * ones (1, 5), box)) ***** assert (~ ismember (box(1, :) - 1, box)) ***** assert (~ ismember (box(2, :) + 1, box)) ***** test y = double (box); y = [y; y + 2]; assert (isequal (ismember (y, box), [1; 1; 0; 0])) 6 tests, 6 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/stk_hrect.m] >>>>> /<>/inst/arrays/@stk_hrect/stk_hrect.m ***** test stk_test_class ('stk_hrect') ***** shared dom ***** test dom = stk_hrect ([-1; 1], {'x'}); ***** assert (isequal (dom.colnames, {'x'})) ***** assert (isequal (dom.rownames, {'lower_bounds'; 'upper_bounds'})) ***** assert (isequal (dom.data, [-1; 1])) 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/stk_boundingbox.m] >>>>> /<>/inst/arrays/@stk_hrect/stk_boundingbox.m ***** shared x, y lb = rand (1, 5); ub = lb + 1; cn = {'a', 'b', 'c', 'd', 'e'}; x = stk_hrect ([lb; ub], cn); ***** error y = stk_boundingbox (); ***** test y = stk_boundingbox (x); ***** assert (isequal (y, x)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/subsref.m] >>>>> /<>/inst/arrays/@stk_hrect/subsref.m ***** test B = stk_hrect ([0 0 0 0; 1 2 3 4]); B = B(:, [1 3 4]); assert (strcmp (class (B), 'stk_hrect')); assert (isequal (double (B), [0 0 0; 1 3 4])); ***** test B = stk_hrect ([0 0 0 0; 1 2 3 4]); B = B(1, :); assert (strcmp (class (B), 'stk_dataframe')); assert (isequal (double (B), [0 0 0 0])); 2 tests, 2 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/stk_rescale.m] >>>>> /<>/inst/arrays/@stk_hrect/stk_rescale.m ***** shared x x = rand (10, 4); y = stk_rescale (x, [], []); assert (stk_isequal_tolabs (x, y)); ***** test y = stk_rescale(0.5, [], [0; 2]); assert (stk_isequal_tolabs (y, 1.0)); ***** test y = stk_rescale (0.5, [0; 1], [0; 2]); assert (stk_isequal_tolabs (y, 1.0)); ***** test y = stk_rescale (0.5, [0; 2], []); assert (stk_isequal_tolabs (y, 0.25)); ***** test y = stk_rescale (0.5, [0; 2], [0; 1]); assert (stk_isequal_tolabs (y, 0.25)); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/@stk_hrect/stk_dataframe.m] >>>>> /<>/inst/arrays/@stk_hrect/stk_dataframe.m ***** shared x, cn, rn, y, cn2, rn2 cn = {'x' 'y'}; rn = {'lower_bounds'; 'upper_bounds'}; x = stk_hrect ([0 0; 1 1], cn); cn2 = {'xx' 'yy'}; rn2 = {'aa'; 'bb'}; ***** test y = stk_dataframe (x); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn)) ***** assert (isequal (y.rownames, rn)) ***** test y = stk_dataframe (x, cn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn2)) ***** assert (isequal (y.rownames, rn)) ***** test y = stk_dataframe (x, cn2, rn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn2)) ***** assert (isequal (y.rownames, rn2)) ***** test y = stk_dataframe (x, [], rn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn)) ***** assert (isequal (y.rownames, rn2)) ***** test y = stk_dataframe (x, {}, rn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, {})) ***** assert (isequal (y.rownames, rn2)) 20 tests, 20 passed, 0 known failure, 0 skipped [inst/arrays/generic/stk_normalize.m] >>>>> /<>/inst/arrays/generic/stk_normalize.m ***** shared x, box, y1, y2, y3, y4 n = 5; box = [2; 3]; x = box(1) + diff (box) * rand (n, 1); ***** error y1 = stk_normalize (); ***** test y2 = stk_normalize (x); ***** test y3 = stk_normalize (x, box); ***** test assert (~ any ((y2 < -10 * eps) | (y2 > 1 + 10 * eps))); ***** test assert (~ any ((y3 < -10 * eps) | (y3 > 1 + 10 * eps))); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/generic/stk_boundingbox.m] >>>>> /<>/inst/arrays/generic/stk_boundingbox.m ***** shared x, y, cn cn = {'a', 'b', 'c'}; x = [0 3 2; 1 4 1; 7 0 2]; ***** error y = stk_boundingbox (); ***** test y = stk_boundingbox (x); ***** assert (isequal (y.data, [0 0 1; 7 4 2])); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/generic/stk_length.m] >>>>> /<>/inst/arrays/generic/stk_length.m ***** assert (isequal (stk_length ([1 2; 3 4; 5 6]), 3)); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/generic/stk_rescale.m] >>>>> /<>/inst/arrays/generic/stk_rescale.m ***** shared x x = rand (10, 4); y = stk_rescale (x, [], []); assert (stk_isequal_tolabs (x, y)); ***** test y = stk_rescale(0.5, [], [0; 2]); assert (stk_isequal_tolabs (y, 1.0)); ***** test y = stk_rescale (0.5, [0; 1], [0; 2]); assert (stk_isequal_tolabs (y, 1.0)); ***** test y = stk_rescale (0.5, [0; 2], []); assert (stk_isequal_tolabs (y, 0.25)); ***** test y = stk_rescale (0.5, [0; 2], [0; 1]); assert (stk_isequal_tolabs (y, 0.25)); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/generic/stk_feval.m] >>>>> /<>/inst/arrays/generic/stk_feval.m ***** shared f, xt f = @(x)(- (0.7 * x + sin (5 * x + 1) + 0.1 * sin (10 * x))); xt = stk_sampling_regulargrid (20, 1, [0; 1]); ***** error yt = stk_feval (); ***** error yt = stk_feval (f); ***** test yt = stk_feval (f, xt); ***** test yt = stk_feval (f, xt, false); ***** test yt = stk_feval (f, xt, false, false); ***** test yt = stk_feval (f, xt, false, false, false); ***** test N = 15; xt = stk_sampling_regulargrid (N, 1, [0; 1]); yt = stk_feval (f, xt); assert (isequal (size (yt), [N 1])); ***** test x = stk_dataframe ([1; 2; 3], {'x'}, {'a'; 'b'; 'c'}); y = stk_feval (@(u)(2 * u), x); assert (isequal (y.data, [2; 4; 6])); assert (isequal (y.rownames, {'a'; 'b'; 'c'})); ***** shared t, z_ref, n n = 20; t = stk_sampling_regulargrid (n, 1, [0; 2*pi]); z_ref = [sin(t.data) cos(t.data)]; ***** test t.colnames = {'time'}; z = stk_feval ({@sin, @cos}, t); assert (isa (z, 'stk_dataframe')); assert (isequal (z.data, z_ref)); ***** test F = @(x)([sin(x) cos(x)]); z = stk_feval (F, t); assert (isequal (z.data, z_ref)); ***** test t = stk_sampling_regulargrid (n, 1, [0; 2*pi]); F = {'sin', 'cos'}; z = stk_feval (F, t); assert (isequal (z.data, [sin(t.data) cos(t.data)])); assert (isequal (z.colnames, {'sin' 'cos'})); ***** test % vectorized F = @(t)([sin(t) cos(t)]); G = @(t)(0.365 * t.^2 + (cos ((t - 1).*(t - 2) + 0.579033))); z = stk_feval ({@sin, @cos, G, F, 'tan'}, t); assert (isequal (z.colnames, {'sin' 'cos' 'F3' 'F4_1' 'F4_2' 'tan'})); ***** test % not vectorized F = @(t)([sin(t) cos(t)]); G = @(t)(0.365 * t^2 + (cos ((t - 1)*(t - 2) + 0.579033))); z = stk_feval ({@sin, @cos, G, F, 'tan'}, t, [], [], false); assert (isequal (z.colnames, {'sin' 'cos' 'F3' 'F4_1' 'F4_2' 'tan'})); 13 tests, 13 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_sprintf.m] >>>>> /<>/inst/arrays/@stk_dataframe/stk_sprintf.m ***** shared x, fmt fmt = stk_disp_getformat (); x = stk_dataframe (rand (3, 2)); ***** test format rat; disp (x); : -------- -------- * : 0.016429 0.407478 * : 0.226203 0.526352 * : 0.143935 0.500732 ***** test format long; disp (x); : ---------------- ---------------- * : 0.01642901672048 0.40747790702360 * : 0.22620336568865 0.52635163767381 * : 0.14393479856885 0.50073155377497 ***** test format short; disp (x); format (fmt); : -------- -------- * : 0.016429 0.407478 * : 0.226203 0.526352 * : 0.143935 0.500732 ***** test disp (stk_dataframe (zeros (0, 1))) Empty data frame with 0 rows and 0 columns ***** test disp (stk_dataframe (zeros (0, 2))) Empty data frame with 0 rows and 0 columns 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/acos.m] >>>>> /<>/inst/arrays/@stk_dataframe/acos.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = acos (x); assert (strcmp (class (v), class (u)) && isequal (v, acos (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_normalize.m] >>>>> /<>/inst/arrays/@stk_dataframe/stk_normalize.m ***** test u = rand (6, 2) * 2; x = stk_dataframe (u); y = stk_normalize (x); assert (isa (y, 'stk_dataframe') ... && stk_isequal_tolabs (double (y), stk_normalize (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/quantile.m] >>>>> /<>/inst/arrays/@stk_dataframe/quantile.m ***** shared x1, df1, p x1 = rand (9, 3); df1 = stk_dataframe (x1, {'a', 'b', 'c'}); p = 0.95; ***** assert (isequal (quantile (df1, p), quantile (x1, p))) ***** assert (isequal (quantile (df1, p, 1), quantile (x1, p))) ***** assert (isequal (quantile (df1, p, 2), quantile (x1, p, 2))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/acosh.m] >>>>> /<>/inst/arrays/@stk_dataframe/acosh.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = acosh (x); assert (strcmp (class (v), class (u)) && isequal (v, acosh (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/std.m] >>>>> /<>/inst/arrays/@stk_dataframe/std.m ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (std(df1), std(x1))) ***** assert (isequal (std(df1, 0, 1), std(x1))) ***** assert (isequal (std(df1, 0, 2), std(x1, 0, 2))) ***** assert (isequal (std(df1, 1), std(x1, 1))) ***** assert (isequal (std(df1, 1, 1), std(x1, 1))) ***** assert (isequal (std(df1, 1, 2), std(x1, 1, 2))) 6 tests, 6 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/sinh.m] >>>>> /<>/inst/arrays/@stk_dataframe/sinh.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = sinh (x); assert (strcmp (class (v), class (u)) && isequal (v, sinh (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/asind.m] >>>>> /<>/inst/arrays/@stk_dataframe/asind.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = asind (x); assert (strcmp (class (v), class (u)) && isequal (v, asind (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/asinh.m] >>>>> /<>/inst/arrays/@stk_dataframe/asinh.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = asinh (x); assert (strcmp (class (v), class (u)) && isequal (v, asinh (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/minus.m] >>>>> /<>/inst/arrays/@stk_dataframe/minus.m ***** test stk_test_dfbinaryop(@minus, rand(7, 2), rand(7, 2)); ***** test stk_test_dfbinaryop(@minus, rand(7, 2), pi); ***** error stk_test_dfbinaryop(@minus, rand(7, 2), rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/length.m] >>>>> /<>/inst/arrays/@stk_dataframe/length.m ***** error length (stk_dataframe ([1 2; 3 4; 5 6])) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/double.m] >>>>> /<>/inst/arrays/@stk_dataframe/double.m ***** test u = rand(4, 3); x = stk_dataframe(u); v = double(x); assert (strcmp(class(v), 'double') && isequal(v, u)) ***** test u = (rand(4, 3) < 0.5); x = stk_dataframe(u); v = double(x); assert (strcmp(class(v), 'double') && isequal(v, double(u))) ***** test u = uint8 (rand (4, 3) * 5); x = stk_dataframe(u); v = double(x); assert (strcmp(class(v), 'double') && isequal(v, double(u))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/vertcat.m] >>>>> /<>/inst/arrays/@stk_dataframe/vertcat.m ***** shared u, v u = rand (3, 2); v = rand (3, 2); ***** test x = stk_dataframe (u); y = stk_dataframe (v); z = vertcat (x, y); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u; v])); ***** test % the same, with row names this time x = stk_dataframe (u, {}, {'a'; 'b'; 'c'}); y = stk_dataframe (v, {}, {'d'; 'e'; 'f'}); z = vertcat (x, y); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u; v])); assert (all (strcmp (z.rownames, {'a'; 'b'; 'c'; 'd'; 'e'; 'f'}))); ***** test % the same, with row names only for the first argument x = stk_dataframe (u, {}, {'a'; 'b'; 'c'}); y = stk_dataframe (v); z = vertcat (x, y); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u; v])); ***** test % incompatible variable names u = rand (3, 1); x = stk_dataframe (u, {'x'}); v = rand (3, 1); y = stk_dataframe (v, {'y'}); z = vertcat (x, y); assert (isequal (z.colnames, {})); warning: Incompatible column names ! The output of vertcat will have no column names. ***** test x = stk_dataframe (u); z = vertcat (x, v); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u; v])); ***** test % the same, with row names for the first argument x = stk_dataframe (u, {}, {'a'; 'b'; 'c'}); z = vertcat (x, v); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u; v])); ***** test y = stk_dataframe (v); z = vertcat (u, y); assert (isa (z, 'stk_dataframe') && (isequal (double (z), [u; v]))); ***** test x = stk_dataframe (u); y = stk_dataframe (v); z = vertcat (x, y, u, v); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u; v; u; v])); ***** shared x, y x = stk_dataframe (rand (2, 3), {'a', 'b', 'c'}); y = stk_dataframe (rand (3, 2), {'a', 'b'}); y = horzcat (y, rand(3, 1)); % last column name is missing ***** test z = vertcat (x, y); assert (isequal (z.colnames, {'a' 'b' 'c'})) ***** test z = vertcat (y, x); assert (isequal (z.colnames, {'a' 'b' 'c'})) 10 tests, 10 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/power.m] >>>>> /<>/inst/arrays/@stk_dataframe/power.m ***** test stk_test_dfbinaryop(@power, rand(7, 2), .1 + rand(7, 2)); ***** test stk_test_dfbinaryop(@power, rand(7, 2), .1); ***** error stk_test_dfbinaryop(@power, rand(7, 2), .1 + rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/min.m] >>>>> /<>/inst/arrays/@stk_dataframe/min.m ***** test stk_test_dfbinaryop ('min', rand(7, 2), rand(7, 2)); ***** test stk_test_dfbinaryop ('min', rand(7, 2), pi); ***** error stk_test_dfbinaryop ('min', rand(7, 2), rand(7, 3)); ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (min(df1), min(x1))) ***** assert (isequal (min(df1, [], 1), min(x1))) ***** assert (isequal (min(df1, [], 2), min(x1, [], 2))) ***** error (min(df1, df1, 2)) ***** test x = stk_dataframe ([5; 2; 4]); [M, k] = min (x); assert ((M == 2) && (k == 2)); 8 tests, 8 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/plus.m] >>>>> /<>/inst/arrays/@stk_dataframe/plus.m ***** test stk_test_dfbinaryop(@plus, rand(7, 2), rand(7, 2)); ***** test stk_test_dfbinaryop(@plus, rand(7, 2), pi); ***** error stk_test_dfbinaryop(@plus, rand(7, 2), rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/display.m] >>>>> /<>/inst/arrays/@stk_dataframe/display.m ***** test display (stk_dataframe (rand (3, 2))); = <3x2 stk_dataframe array> : -------- -------- * : 0.840255 0.499865 * : 0.950976 0.621664 * : 0.905152 0.077187 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/cos.m] >>>>> /<>/inst/arrays/@stk_dataframe/cos.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = cos (x); assert (strcmp (class (v), class (u)) && isequal (v, cos (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/size.m] >>>>> /<>/inst/arrays/@stk_dataframe/size.m ***** shared x x = stk_dataframe([1 2; 3 4; 5 6]); ***** assert (isequal (size(x), [3 2])) ***** assert (numel(x) == 1) ***** assert (ndims(x) == 2) ***** test size(x); % force exploration of branch nargout == 0 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/horzcat.m] >>>>> /<>/inst/arrays/@stk_dataframe/horzcat.m ***** shared u, v u = rand(3, 2); v = rand(3, 2); ***** test x = stk_dataframe(u, {'x1' 'x2'}); y = stk_dataframe(v, {'y1' 'y2'}); z = horzcat (x, y); assert(isa(z, 'stk_dataframe') && isequal(double(z), [u v])); assert(all(strcmp(z.colnames, {'x1' 'x2' 'y1' 'y2'}))); ***** test x = stk_dataframe(u, {'x1' 'x2'}, {'a'; 'b'; 'c'}); y = stk_dataframe(v, {'y1' 'y2'}); z = horzcat (x, y); assert(isa(z, 'stk_dataframe') && isequal(double(z), [u v])); assert(all(strcmp(z.colnames, {'x1' 'x2' 'y1' 'y2'}))); assert(all(strcmp(z.rownames, {'a'; 'b'; 'c'}))); ***** test x = stk_dataframe(u, {'x1' 'x2'}); y = stk_dataframe(v, {'y1' 'y2'}, {'a'; 'b'; 'c'}); z = horzcat (x, y); assert(isa(z, 'stk_dataframe') && isequal(double(z), [u v])); assert(all(strcmp(z.colnames, {'x1' 'x2' 'y1' 'y2'}))); assert(all(strcmp(z.rownames, {'a'; 'b'; 'c'}))); ***** test % incompatible row names x = stk_dataframe (u, {'x1' 'x2'}, {'a'; 'b'; 'c'}); y = stk_dataframe (v, {'y1' 'y2'}, {'a'; 'b'; 'd'}); z = horzcat (x, y); assert (isequal (z.rownames, {})); warning: Incompatible row names ! The output of horzcat will have no row names. ***** test x = stk_dataframe (u); z = horzcat (x, v); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u v])); ***** test y = stk_dataframe (v); z = horzcat (u, y); assert (isa (z, 'stk_dataframe') && isequal (double (z), [u v])); ***** test x = stk_dataframe(u, {'x1' 'x2'}); y = stk_dataframe(v, {'y1' 'y2'}); z = horzcat (x, y, u, v); assert(isa(z, 'stk_dataframe') && isequal(double(z), [u v u v])); 7 tests, 7 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/mean.m] >>>>> /<>/inst/arrays/@stk_dataframe/mean.m ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (mean(df1), mean(x1))) ***** assert (isequal (mean(df1, 1), mean(x1))) ***** assert (isequal (mean(df1, 2), mean(x1, 2))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/sind.m] >>>>> /<>/inst/arrays/@stk_dataframe/sind.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = sind (x); assert (strcmp (class (v), class (u)) && isequal (v, sind (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/subsasgn.m] >>>>> /<>/inst/arrays/@stk_dataframe/subsasgn.m ***** shared x, s, t, data x = stk_dataframe (rand (3, 2)); s = {'a'; 'b'; 'c'}; t = {'xx' 'yy'}; ***** test x.rownames = s; assert (isequal (get (x, 'rownames'), s)) ***** test x.colnames = t; assert (isequal (get (x, 'rownames'), s)) assert (isequal (get (x, 'colnames'), t)) ***** test x.rownames{2} = 'dudule'; assert (isequal (get (x, 'rownames'), {'a'; 'dudule'; 'c'})) assert (isequal (get (x, 'colnames'), t)) ***** test x.colnames{1} = 'martha'; assert (isequal (get (x, 'rownames'), {'a'; 'dudule'; 'c'})) assert (isequal (get (x, 'colnames'), {'martha' 'yy'})) ***** test data = stk_dataframe (zeros(3, 2), {'x1' 'x2'}); u = rand(3, 1); data.x2 = u; assert (isequal (double (data), [zeros(3, 1) u])) ***** test data = stk_dataframe (zeros (3, 2), {'x1' 'x2'}); data.x2(3) = 27; assert (isequal (double (data), [0 0; 0 0; 0 27])) ***** error data.toto = rand (3, 1); ***** shared x x = stk_dataframe (reshape (1:12, 4, 3), {'u' 'v' 'w'}); ***** test x(:, 2) = []; assert (isequal (size (x), [4 2])) assert (isequal (double (x), [1 9; 2 10; 3 11; 4 12])) assert (isequal (get (x, 'colnames'), {'u' 'w'})) assert (isempty (get (x, 'rownames'))) ***** test x(2, :) = []; assert (isequal (size (x), [3 2])) assert (isequal (double (x), [1 9; 3 11; 4 12])) assert (isempty (get (x, 'rownames'))) ***** test x.rownames = {'a'; 'b'; 'c'}; x(2, :) = []; assert (isequal (size (x), [2 2])) assert (isequal (double (x), [1 9; 4 12])) assert (isequal (x.rownames, {'a'; 'c'})) ***** test % change one value with matrix-style indexing x(1, 2) = 11; assert (isequal (size (x), [2 2])) assert (isequal (double (x), [1 11; 4 12])) ***** test % change one value with linear indexing x(3) = 13; assert (isequal (size (x), [2 2])) assert (isequal (double (x), [1 13; 4 12])) ***** assert (isequal (double (x(:, :)), [1 13; 4 12])); ***** test % assignment to a variable that doesn't exist A = stk_dataframe (7.1); clear B; B(2) = A; assert (strcmp (class (B), 'stk_dataframe')) assert (isequal (B.data, [0 7.1])); ***** test % repmat x = stk_dataframe (1); y = repmat (x, 2, 3); assert (isa (y, 'stk_dataframe')); assert (isequal (y.data, ones (2, 3))); ***** test x(:, :) = []; assert (isempty (x)); ***** test % Delete the only row of a one-row dataframe y1 = stk_dataframe ([1.2 3.33], {'mean', 'var'}); y1(1, :) = []; % Remove the only row of data assert (isequal (size (y1), [0 2])) assert (isequal (y1.colnames, {'mean', 'var'})) y11 = get (y1, 'mean'); assert (isempty (y11)); ***** error x{1} = 2; ***** error x(1, 2) = []; ***** error x(1, 2).a = 3; ***** shared x x = stk_dataframe((1:5)'); ***** test x(2) = 0; assert (isequal (double (x), [1; 0; 3; 4; 5])); ***** test x(3) = []; assert (isequal (double (x), [1; 0; 4; 5])); ***** test x(3, 1) = 0; assert (isequal(double(x), [1; 0; 0; 5])); ***** error x(3, 1, 1) = 297; ***** test % create a new row and a new column through subsasgn() x = stk_dataframe (rand (5, 2)); x(6, 3) = 7; assert(isequal(size(x), [6, 3])); ***** test x = stk_dataframe ([]); x.colnames{2} = 'v'; x.rownames{2} = 'b'; assert (isequal (x.rownames, {''; 'b'})); assert (isequal (x.colnames, {'' 'v'})); assert (isequal (size (x.data), [2 2]) && (all (isnan (x.data(:))))) ***** shared x x = stk_dataframe (reshape (1:12, 4, 3), {'u' 'v' 'w'}); ***** test % change one column using ':', plain numeric argument y = [0; 9; 0; 9]; z = x; z(:, 2) = y; assert (isequal (z(:, 1), x(:, 1))); assert (isequal (z(:, 2).data, y)); ***** test % change one column using ':', skt_dataframe argument y = stk_dataframe ([0; 9; 0; 9], {'y'}); z = x; z(:, 2) = y; assert (isequal (z(:, 1), x(:, 1))); assert (isequal (z(:, 2), y)); ***** shared x x = stk_dataframe (reshape (1:12, 4, 3), [], {'a'; 'b'; 'c'; 'd'}); ***** test % change one row using ':', plain numeric argument y = [7 7 7]; z = x; z(3, :) = y; assert (isequal (z(1, :), x(1, :))); assert (isequal (z(3, :).data, y)); ***** test % change one row using ':', skt_dataframe argument y = stk_dataframe ([7 7 7], [], {'y'}); z = x; z(3, :) = y; assert (isequal (z(1, :), x(1, :))); assert (isequal (z(3, :), y)); ***** shared x x = stk_dataframe (zeros (2), {'u' 'v'}); ***** test % first column x(1:2) = 1; y = stk_dataframe ([1 0; 1 0], {'u' 'v'}); assert (isequal (x, y)); ***** test % one more element x(1:3) = 2; y = stk_dataframe ([2 2; 2 0], {'u' 'v'}); assert (isequal (x, y)); ***** error % too many elements x(1:5) = 3; ***** shared x x = stk_dataframe (randn (3, 3)); ***** test x.colnames{2} = 'y'; ***** assert (isequal (x.colnames, {'' 'y' ''})); ***** test x.rownames{2} = 'b'; ***** assert (isequal (x.rownames, {''; 'b'; ''})); 37 tests, 37 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/isnan.m] >>>>> /<>/inst/arrays/@stk_dataframe/isnan.m ***** test u = [pi, NaN, Inf, -Inf]; x = stk_dataframe (u); v = isnan (x); assert (islogical (v) && isequal (v, isnan (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/reshape.m] >>>>> /<>/inst/arrays/@stk_dataframe/reshape.m ***** test x = stk_dataframe (randn (10, 3)); y = reshape (x, 5, 6); assert (isa (y, 'stk_dataframe') && isequal (size (y), [5 6])) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/ismember.m] >>>>> /<>/inst/arrays/@stk_dataframe/ismember.m ***** shared u, x, u1, x1, u2, x2 u = rand (10, 4); x = stk_dataframe (u); x1 = x(1, :); u1 = double (x1); u2 = - ones (1, 4); x2 = stk_dataframe (u2); ***** assert (ismember (u1, x, 'rows')) ***** assert (ismember (x1, u, 'rows')) ***** assert (ismember (x1, x, 'rows')) ***** assert (~ ismember (u2, x, 'rows')) ***** assert (~ ismember (x2, u, 'rows')) ***** assert (~ ismember (x2, x, 'rows')) ***** test [b, idx] = ismember ([x2; x1; x1], x, 'rows'); assert (isequal (b, [false; true; true])); assert (isequal (idx, [0; 1; 1])) 7 tests, 7 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/cat.m] >>>>> /<>/inst/arrays/@stk_dataframe/cat.m ***** shared u, v, x, y u = rand(3, 2); v = rand(3, 2); x = stk_dataframe(u); y = stk_dataframe(v); ***** test % vertical z = cat(1, x, y); assert(isa(z, 'stk_dataframe')); assert(isequal(double(z), [u; v])); ***** error z = cat(3, x, y); ***** test % horizontal y = stk_dataframe(v, {'y1' 'y2'}); z = cat(2, x, y); assert(isa(z, 'stk_dataframe')); assert(isequal(double(z), [u v])); assert(all(strcmp(z.colnames, {'' '' 'y1' 'y2'}))); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/sort.m] >>>>> /<>/inst/arrays/@stk_dataframe/sort.m ***** shared x, y x = stk_dataframe ([3; 2; 1], {}, {'a', 'b', 'c'}); y = sort (x); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.data, [1; 2; 3])) ***** assert (isequal (y.rownames, {'c'; 'b'; 'a'})) ***** error y = sort (x, []); ***** assert (isequal (sort (x, 1), y)) ***** assert (isequal (sort (x, 2), x)) ***** error sort (x, 3) ***** error y = sort (x, [], 'ascend'); ***** assert (isequal (sort (x, 1, 'ascend'), y)) ***** assert (isequal (sort (x, 2, 'ascend'), x)) ***** error y = sort (x, 3, 'ascend'); ***** error y = sort (x, [], 'descend'); ***** assert (isequal (sort (x, 1, 'descend'), x)) ***** assert (isequal (sort (x, 2, 'descend'), x)) ***** error sort (x, 3, 'descend') 15 tests, 15 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/disp.m] >>>>> /<>/inst/arrays/@stk_dataframe/disp.m ***** shared x, fmt fmt = stk_disp_getformat (); x = stk_dataframe (rand (3, 2)); ***** test format rat; disp (x); : -------- -------- * : 0.181679 0.672150 * : 0.474989 0.265962 * : 0.310470 0.671465 ***** test format long; disp (x); : ---------------- ---------------- * : 0.18167938590950 0.67214984480931 * : 0.47498867600284 0.26596197409067 * : 0.31047007486308 0.67146492160708 ***** test format short; disp (x); format (fmt); : -------- -------- * : 0.181679 0.672150 * : 0.474989 0.265962 * : 0.310470 0.671465 ***** test disp (stk_dataframe (zeros (0, 1))) Empty data frame with 0 rows and 0 columns ***** test disp (stk_dataframe (zeros (0, 2))) Empty data frame with 0 rows and 0 columns 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/asin.m] >>>>> /<>/inst/arrays/@stk_dataframe/asin.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = asin (x); assert (strcmp (class (v), class (u)) && isequal (v, asin (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/exp.m] >>>>> /<>/inst/arrays/@stk_dataframe/exp.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = exp (x); assert (strcmp (class (v), class (u)) && isequal (v, exp (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/mode.m] >>>>> /<>/inst/arrays/@stk_dataframe/mode.m ***** shared x1, df1 x1 = floor(3 * rand(9, 3)); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (mode(df1), mode(x1))) ***** assert (isequal (mode(df1, 1), mode(x1))) ***** assert (isequal (mode(df1, 2), mode(x1, 2))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/sin.m] >>>>> /<>/inst/arrays/@stk_dataframe/sin.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = sin (x); assert (strcmp (class (v), class (u)) && isequal (v, sin (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/log.m] >>>>> /<>/inst/arrays/@stk_dataframe/log.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = log (x); assert (strcmp (class (v), class (u)) && isequal (v, log (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/tand.m] >>>>> /<>/inst/arrays/@stk_dataframe/tand.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = tand (x); assert (strcmp (class (v), class (u)) && isequal (v, tand (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/cosd.m] >>>>> /<>/inst/arrays/@stk_dataframe/cosd.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = cosd (x); assert (strcmp (class (v), class (u)) && isequal (v, cosd (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/isinf.m] >>>>> /<>/inst/arrays/@stk_dataframe/isinf.m ***** test u = [pi, NaN, Inf, -Inf]; x = stk_dataframe (u); v = isinf (x); assert (islogical (v) && isequal (v, isinf (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/ldivide.m] >>>>> /<>/inst/arrays/@stk_dataframe/ldivide.m ***** test stk_test_dfbinaryop(@ldivide, 1 + rand(7, 2), rand(7, 2)); ***** test stk_test_dfbinaryop(@ldivide, 1 + rand(7, 2), pi); ***** error stk_test_dfbinaryop(@ldivide, 1 + rand(7, 2), rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/log2.m] >>>>> /<>/inst/arrays/@stk_dataframe/log2.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = log2 (x); assert (strcmp (class (v), class (u)) && isequal (v, log2 (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/mrdivide.m] >>>>> /<>/inst/arrays/@stk_dataframe/mrdivide.m ***** test x1_data = [8 7; 58 49]; x1 = stk_dataframe (x1_data, {'x' 'y'}, {'a'; 'b'}); x2_data = [8 7; 2 0]; x2 = stk_dataframe (x2_data, {'x' 'y'}, {'u'; 'v'}); y = x1 / x2; assert (stk_isequal_tolabs (y, ... stk_dataframe ([1 0; 7 1], {'u'; 'v'}, {'a'; 'b'}))); ***** shared x_data, x, y_data, y x_data = [3 3; 6 3; 9 12]; y_data = [1 1; 2 1; 3 4]; x = stk_dataframe (x_data, {'x' 'y'}, {'a'; 'b'; 'c'}); ***** test y = x / 3; ***** assert (isequal (y, stk_dataframe ([1 1; 2 1; 3 4], {'x' 'y'}, {'a'; 'b'; 'c'}))); ***** error y = 3 / x; 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/acosd.m] >>>>> /<>/inst/arrays/@stk_dataframe/acosd.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = acosd (x); assert (strcmp (class (v), class (u)) && isequal (v, acosd (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/plot.m] >>>>> /<>/inst/arrays/@stk_dataframe/plot.m ***** test % plot with x as a vector and z as a (univariate) dataframe x = linspace(0, 2*pi, 30)'; z = stk_dataframe(sin(x)); figure; plot(x, z); close(gcf); ***** test % plot with x as a vector and z as a (multivariate) dataframe x = linspace(0, 2*pi, 30)'; z = stk_dataframe([sin(x) cos(x)], {'sin' 'cos'}); figure; plot(x, z); close(gcf); ***** test % plot with x as a dataframe and z as a vector x = stk_dataframe(linspace(0, 2*pi, 30)'); z = sin(double(x)); figure; plot(x, z); close(gcf); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/apply.m] >>>>> /<>/inst/arrays/@stk_dataframe/apply.m ***** shared x, t, u t = rand (3, 2); x = stk_dataframe (t); ***** test u = apply (x, 1, @sum); ***** assert (isequal (u, sum (t, 1))) ***** test u = apply (x, 2, @sum); ***** assert (isequal (u, sum (t, 2))) ***** error u = apply (x, 3, @sum); ***** test u = apply (x, 1, @min, []); ***** assert (isequal (u, min (t, [], 1))) ***** test u = apply (x, 2, @min, []); ***** assert (isequal (u, min (t, [], 2))) ***** error u = apply (x, 3, @min, []); ***** test t = [1; 3; 2]; x = stk_dataframe (t); [M, k] = apply (x, 1, @max, []); assert ((M == 3) && (k == 2)); 11 tests, 11 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/prod.m] >>>>> /<>/inst/arrays/@stk_dataframe/prod.m ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (prod(df1), prod(x1))) ***** assert (isequal (prod(df1, 1), prod(x1))) ***** assert (isequal (prod(df1, 2), prod(x1, 2))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/cosh.m] >>>>> /<>/inst/arrays/@stk_dataframe/cosh.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = cosh (x); assert (strcmp (class (v), class (u)) && isequal (v, cosh (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/sum.m] >>>>> /<>/inst/arrays/@stk_dataframe/sum.m ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (sum(df1), sum(x1))) ***** assert (isequal (sum(df1, 1), sum(x1))) ***** assert (isequal (sum(df1, 2), sum(x1, 2))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_boundingbox.m] >>>>> /<>/inst/arrays/@stk_dataframe/stk_boundingbox.m ***** shared x, y, cn cn = {'a', 'b', 'c'}; x = stk_dataframe ([0 3 2; 1 4 1; 7 0 2], cn); ***** error y = stk_boundingbox (); ***** test y = stk_boundingbox (x); ***** assert (isequal (y, stk_hrect ([0 0 1; 7 4 2], cn))); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/times.m] >>>>> /<>/inst/arrays/@stk_dataframe/times.m ***** test stk_test_dfbinaryop(@times, rand(7, 2), rand(7, 2)); ***** test stk_test_dfbinaryop(@times, rand(7, 2), pi); ***** error stk_test_dfbinaryop(@times, rand(7, 2), rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/expm1.m] >>>>> /<>/inst/arrays/@stk_dataframe/expm1.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = expm1 (x); assert (strcmp (class (v), class (u)) && isequal (v, expm1 (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_length.m] >>>>> /<>/inst/arrays/@stk_dataframe/stk_length.m ***** test x = stk_dataframe ([1 2; 3 4; 5 6]); assert (isequal (stk_length (x), 3)); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/subsref.m] >>>>> /<>/inst/arrays/@stk_dataframe/subsref.m ***** shared x, s, t, data x = stk_dataframe(rand(3, 2)); s = {'a'; 'b'; 'c'}; t = {'xx' 'yy'}; ***** test x = set(x, 'rownames', s); assert (isequal (x.rownames, s)) assert (isequal (x.rownames{2}, 'b')) ***** test x = set(x, 'colnames', t); assert (isequal (x.rownames, s)) assert (isequal (x.colnames, t)) assert (isequal (x.colnames{2}, 'yy')) ***** shared u, data u = rand(3, 2); data = stk_dataframe(u, {'x1', 'x2'}); ***** assert (isequal (data.x2, u(:, 2))) ***** assert (data.x2(3) == u(3, 2)) ***** error t = data.toto; ***** error t = data(1, 1).zzz; % illegal multilevel indexing ***** error t = data(1, 1, 1); % too many indices ***** error t = data{1}; % curly braces not allowed ***** test % select rows and columns x = stk_dataframe (reshape (1:15, 5, 3), {'u' 'v' 'w'}); assert (isequal (x([3 5], 2), stk_dataframe ([8; 10], {'v'}))); ***** shared u, data u = rand(3, 1); data = stk_dataframe(u, {'x'}); ***** assert (isequal (data.x, u)) ***** assert (isequal (double (data), u)) ***** assert (isequal (double (data(2)), u(2))) ***** assert (isequal (double (data(3, 1)), u(3))) ***** error t = data(1, 1, 1); % too many indices ***** test x = stk_dataframe (randn (2, 2), {'u' 'v'}); y = x ([], :); assert (isa (y, 'stk_dataframe')); assert (isequal (size (y), [0 2])); assert (isequal (y.colnames, {'u' 'v'})); ***** test x = stk_dataframe (randn (2, 2), [], {'a' 'b'}); y = x (:, []); assert (isa (y, 'stk_dataframe')); assert (isequal (size (y), [2 0])); assert (isequal (y.rownames, {'a'; 'b'})); 16 tests, 16 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/unique.m] >>>>> /<>/inst/arrays/@stk_dataframe/unique.m ***** test cn = {'u' 'v' 'w'}; x = stk_dataframe (rand (4, 3), cn); y = [x; x]; z = unique (y, 'rows'); assert (isequal (z.colnames, cn)); assert (isequal (z.data, unique (x.data, 'rows'))); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/atand.m] >>>>> /<>/inst/arrays/@stk_dataframe/atand.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = atand (x); assert (strcmp (class (v), class (u)) && isequal (v, atand (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/fieldnames.m] >>>>> /<>/inst/arrays/@stk_dataframe/fieldnames.m ***** test x = stk_dataframe (rand (3, 2), {'u' 'v'}); s1 = sort (fieldnames (x)); s2 = {'colnames' 'data' 'info' 'rownames' 'u' 'v'}; assert (all (strcmp (s1, s2))); ***** test x = stk_dataframe (rand (3, 2)); x.rownames(2:3) = {'aa', 'bb'}; x.colnames{2} = 'toto'; assert (isequal (fieldnames (x), ... {'toto' 'aa' 'bb' 'data' 'info' 'rownames' 'colnames'})); 2 tests, 2 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/abs.m] >>>>> /<>/inst/arrays/@stk_dataframe/abs.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = abs (x); assert (strcmp (class (v), class (u)) && isequal (v, abs (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/var.m] >>>>> /<>/inst/arrays/@stk_dataframe/var.m ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (var(df1), var(x1))) ***** assert (isequal (var(df1, 0, 1), var(x1))) ***** assert (isequal (var(df1, 0, 2), var(x1, 0, 2))) ***** assert (isequal (var(df1, 1), var(x1, 1))) ***** assert (isequal (var(df1, 1, 1), var(x1, 1))) ***** assert (isequal (var(df1, 1, 2), var(x1, 1, 2))) 6 tests, 6 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/logical.m] >>>>> /<>/inst/arrays/@stk_dataframe/logical.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = logical (x); assert (strcmp (class(v), 'logical') && isequal (v, logical (u))) ***** test u = (rand (4, 3) < 0.5); x = stk_dataframe (u); v = logical (x); assert (strcmp (class (v), 'logical') && isequal (v, u)) ***** test u = uint8 (rand (4, 3) * 5); x = stk_dataframe (u); v = logical (x); assert (strcmp (class (v), 'logical') && isequal (v, logical (u))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/log10.m] >>>>> /<>/inst/arrays/@stk_dataframe/log10.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = log10 (x); assert (strcmp (class (v), class (u)) && isequal (v, log10 (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/max.m] >>>>> /<>/inst/arrays/@stk_dataframe/max.m ***** test stk_test_dfbinaryop ('max', rand(7, 2), rand(7, 2)); ***** test stk_test_dfbinaryop ('max', rand(7, 2), pi); ***** error stk_test_dfbinaryop ('max', rand(7, 2), rand(7, 3)); ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (max(df1), max(x1))) ***** assert (isequal (max(df1, [], 1), max(x1))) ***** assert (isequal (max(df1, [], 2), max(x1, [], 2))) ***** error (max(df1, df1, 2)) ***** test x = stk_dataframe ([1; 3; 2]); [M, k] = max (x); assert ((M == 3) && (k == 2)); 8 tests, 8 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/log1p.m] >>>>> /<>/inst/arrays/@stk_dataframe/log1p.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = log1p (x); assert (strcmp (class (v), class (u)) && isequal (v, log1p (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/ctranspose.m] >>>>> /<>/inst/arrays/@stk_dataframe/ctranspose.m ***** test u = rand(3, 2) + 1i * rand(3, 2); data = stk_dataframe(u, {'x' 'y'}, {'obs1'; 'obs2'; 'obs3'}); data = data'; assert (isa(data, 'stk_dataframe') && isequal(double(data), u')); assert (isequal(data.rownames, {'x'; 'y'})); assert (isequal(data.colnames, {'obs1' 'obs2' 'obs3'})); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/rdivide.m] >>>>> /<>/inst/arrays/@stk_dataframe/rdivide.m ***** test stk_test_dfbinaryop(@rdivide, rand(7, 2), 1 + rand(7, 2)); ***** test stk_test_dfbinaryop(@rdivide, rand(7, 2), pi); ***** error stk_test_dfbinaryop(@rdivide, rand(7, 2), 1 + rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/sqrt.m] >>>>> /<>/inst/arrays/@stk_dataframe/sqrt.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = sqrt (x); assert (strcmp (class (v), class (u)) && isequal (v, sqrt (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/end.m] >>>>> /<>/inst/arrays/@stk_dataframe/end.m ***** shared x x = stk_dataframe ([1; 2; 3]); ***** assert (isequal (double (x(2:end, :)), [2; 3])) ***** assert (isequal (double (x(2:end)), [2; 3])) ***** assert (isequal (double (x(2, 1:end)), 2)) ***** assert (isequal (double (x(end)), 3)) ***** shared x x = stk_dataframe ([1 2; 3 4; 5 6]); ***** assert (isequal (x(2:end, :), x(2:3, :))) ***** assert (isequal (x(2, 1:end), x(2, :))) ***** assert (isequal (x(2:end, 2:end), x(2:3, 2))) ***** error x(1:end, 1:end, 1:end) 8 tests, 8 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/mldivide.m] >>>>> /<>/inst/arrays/@stk_dataframe/mldivide.m ***** test x1_data = [57 7; 2 0]; x1 = stk_dataframe (x1_data, {'x' 'y'}, {'a'; 'b'}); x2_data = [8 7; 2 0]; x2 = stk_dataframe (x2_data, {'w' 'z'}, {'a'; 'b'}); y = x2 \ x1; assert (stk_isequal_tolabs (y, ... stk_dataframe ([1 0; 7 1], {'x'; 'y'}, {'w'; 'z'}))); ***** shared x_data, x, y_data, y x_data = [3 3; 6 3; 9 12]; y_data = [1 1; 2 1; 3 4]; x = stk_dataframe (x_data, {'x' 'y'}, {'a'; 'b'; 'c'}); ***** test y = 3 \ x; ***** assert (isequal (y, stk_dataframe (y_data, {'x' 'y'}, {'a'; 'b'; 'c'}))); ***** error y = x \ 3; 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/atan.m] >>>>> /<>/inst/arrays/@stk_dataframe/atan.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = atan (x); assert (strcmp (class (v), class (u)) && isequal (v, atan (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/isfinite.m] >>>>> /<>/inst/arrays/@stk_dataframe/isfinite.m ***** test u = [pi, NaN, Inf, -Inf]; x = stk_dataframe (u); v = isfinite (x); assert (islogical (v) && isequal (v, isfinite (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_rescale.m] >>>>> /<>/inst/arrays/@stk_dataframe/stk_rescale.m ***** test u = rand(5, 1) * 2; x = stk_dataframe(u); y = stk_rescale(x, [0; 2], [0; 3]); assert (isa (y, 'stk_dataframe') && isequal(double(y), u * 3/2)) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/atanh.m] >>>>> /<>/inst/arrays/@stk_dataframe/atanh.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = atanh (x); assert (strcmp (class (v), class (u)) && isequal (v, atanh (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/tan.m] >>>>> /<>/inst/arrays/@stk_dataframe/tan.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = tan (x); assert (strcmp (class (v), class (u)) && isequal (v, tan (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/mtimes.m] >>>>> /<>/inst/arrays/@stk_dataframe/mtimes.m ***** shared x, y, z, w u = [1 3 4; 2 7 6]; % 2 x 3 v = [6 2; 1 7; 9 4]; % 3 x 2 w = [45 39; 73 77]; % u * v x = stk_dataframe (u, {}, {'a'; 'b'}); y = stk_dataframe (v, {'c' 'd'}); z = x * y; ***** assert (isa (z, 'stk_dataframe')); ***** assert (isequal (z.data, w)); ***** assert (isequal (z.rownames, x.rownames)); ***** assert (isequal (z.colnames, y.colnames)); ***** shared x, y x = stk_dataframe (rand (3, 2), {'x' 'y'}, {'a'; 'b'; 'c'}); ***** test y = 3 * x; ***** assert (isequal (y, stk_dataframe (3 * x.data, {'x' 'y'}, {'a'; 'b'; 'c'}))); ***** test y = x * 3; ***** assert (isequal (y, stk_dataframe (3 * x.data, {'x' 'y'}, {'a'; 'b'; 'c'}))); 8 tests, 8 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/median.m] >>>>> /<>/inst/arrays/@stk_dataframe/median.m ***** shared x1, df1 x1 = rand(9, 3); df1 = stk_dataframe(x1, {'a', 'b', 'c'}); ***** assert (isequal (median(df1), median(x1))) ***** assert (isequal (median(df1, 1), median(x1))) ***** assert (isequal (median(df1, 2), median(x1, 2))) 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/tanh.m] >>>>> /<>/inst/arrays/@stk_dataframe/tanh.m ***** test u = rand (4, 3); x = stk_dataframe (u); v = tanh (x); assert (strcmp (class (v), class (u)) && isequal (v, tanh (u))) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/transpose.m] >>>>> /<>/inst/arrays/@stk_dataframe/transpose.m ***** test u = rand(3, 2) + 1i * rand(3, 2); data = stk_dataframe(u, {'x' 'y'}, {'obs1'; 'obs2'; 'obs3'}); data = data.'; assert (isa(data, 'stk_dataframe') && isequal(double(data), u.')); assert (isequal(data.rownames, {'x'; 'y'})); assert (isequal(data.colnames, {'obs1' 'obs2' 'obs3'})); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/stk_dataframe.m] >>>>> /<>/inst/arrays/@stk_dataframe/stk_dataframe.m ***** test stk_test_class ('stk_dataframe') ***** test % default constructor x = stk_dataframe (); assert (isa (x, 'stk_dataframe') && isequal (size (x), [0 0])) ***** test y = stk_dataframe (rand (3, 2)); assert (isa (y, 'stk_dataframe') && isequal (size (y), [3 2])) ***** test y = stk_dataframe (rand (3, 2), {'x', 'y'}); assert (isa (y, 'stk_dataframe') && isequal (size(y), [3 2])) assert (isequal (y.colnames, {'x' 'y'})) ***** test y = stk_dataframe (rand (3, 2), {'x', 'y'}, {'a', 'b', 'c'}); assert (isa (y, 'stk_dataframe') && isequal (size (y), [3 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'})) ***** test x = stk_dataframe (rand (3, 2)); y = stk_dataframe (x); assert (isa (y, 'stk_dataframe') && isequal (size (y), [3 2])) ***** error x = stk_dataframe (rand (3, 2)); y = stk_dataframe (x, pi); ***** error x = stk_dataframe (rand (3, 2)); y = stk_dataframe (x, {}, pi); ***** test x = stk_dataframe (rand (3, 2)); y = stk_dataframe (x, {'x' 'y'}); assert (isa (y, 'stk_dataframe') && isequal (size(y), [3 2])) assert (isequal (y.colnames, {'x' 'y'})) ***** test x = stk_dataframe (rand (3, 2)); y = stk_dataframe (x, {'x' 'y'}, {'a', 'b', 'c'}); assert (isa (y, 'stk_dataframe') && isequal (size(y), [3 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'})) ***** test x = stk_dataframe (rand (3, 2), {'x' 'y'}); y = stk_dataframe (x, [], {'a', 'b', 'c'}); assert (isa (y, 'stk_dataframe') && isequal (size(y), [3 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'})) ***** test x = stk_dataframe (rand (3, 2), {'x' 'y'}); y = stk_dataframe (x, {}, {'a', 'b', 'c'}); assert (isa (y, 'stk_dataframe') && isequal (size(y), [3 2])) assert (isequal (y.colnames, {})) assert (isequal (y.rownames, {'a'; 'b'; 'c'})) ***** test x = stk_factorialdesign ({1:3, 1:2}, {'x' 'y'}); y = stk_dataframe (x, [], {'a' 'b' 'c' 'd' 'e' 'f'}); assert (isa (y, 'stk_dataframe') && isequal (size (y), [6 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'; 'd'; 'e'; 'f'})) ***** test x = stk_factorialdesign ({1:3, 1:2}, {}, {'a' 'b' 'c' 'd' 'e' 'f'}); y = stk_dataframe (x, {'x' 'y'}); assert (isa (y, 'stk_dataframe') && isequal (size (y), [6 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'; 'd'; 'e'; 'f'})) ***** test x = stk_factorialdesign ({1:3, 1:2}, {}, {'a' 'b' 'c' 'd' 'e' 'f'}); y = stk_dataframe (x, {'x' 'y'}, []); assert (isa (y, 'stk_dataframe') && isequal (size (y), [6 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'; 'd'; 'e'; 'f'})) ***** test x = stk_factorialdesign ({1:3, 1:2}, {'x' 'y'}, {'a' 'b' 'c' 'd' 'e' 'f'}); y = stk_dataframe (x); assert (isa (y, 'stk_dataframe') && isequal (size (y), [6 2])) assert (isequal (y.colnames, {'x' 'y'})) assert (isequal (y.rownames, {'a'; 'b'; 'c'; 'd'; 'e'; 'f'})) ***** error x = stk_factorialdesign ({1:3, 1:2}); y = stk_dataframe (x, pi); ***** error x = stk_factorialdesign ({1:3, 1:2}); y = stk_dataframe (x, {}, pi); ***** test x = stk_dataframe ([], {'a', 'b'}); assert (isequal (size (x), [0 2])) assert (isequal (x.colnames, {'a' 'b'})); assert (isequal (x.rownames, {})); ***** test x = stk_dataframe ([], {'a', 'b'}, {'toto'}); assert (isequal (size (x), [1 2])) assert (isequal (x.colnames, {'a' 'b'})); assert (isequal (x.rownames, {'toto'})); ***** shared x ***** test x = stk_dataframe (randn (10, 1), 'NOx'); assert (isequal (x.colnames, {'NOx'})); ***** test y = stk_dataframe (x, 'toto'); assert (isequal (y.colnames, {'toto'})); ***** test x = stk_dataframe (randn (1, 2), {}, 'aaa'); assert (isequal (x.rownames, {'aaa'})); ***** test y = stk_dataframe (x, {}, 'tata'); assert (isequal (y.rownames, {'tata'})); 24 tests, 24 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/bsxfun.m] >>>>> /<>/inst/arrays/@stk_dataframe/bsxfun.m ***** shared x1, x2, data1, data2 x1 = rand (3, 2); data1 = stk_dataframe (x1); x2 = rand (3, 2); data2 = stk_dataframe (x2); ***** test z = bsxfun (@plus, data1, x2); assert (isa (z, 'stk_dataframe') && isequal (double (z), x1 + x2)) ***** test z = bsxfun (@plus, x1, data2); assert (isa (z, 'stk_dataframe') && isequal (double (z), x1 + x2)) ***** test z = bsxfun (@plus, data1, data2); assert (isa (z, 'stk_dataframe') && isequal (double (z), x1 + x2)) ***** shared x, y x = stk_dataframe (randn (2), {'x1', 'x2'}, {'a'; 'b'}); y = stk_dataframe (randn (2), {'y1', 'y2'}, {'c'; 'd'}); ***** test z = x + y; assert (isequal (z.colnames, x.colnames)); assert (isequal (z.rownames, x.rownames)); ***** test z = y + x; assert (isequal (z.colnames, y.colnames)); assert (isequal (z.rownames, y.rownames)); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/arrays/@stk_dataframe/realpow.m] >>>>> /<>/inst/arrays/@stk_dataframe/realpow.m ***** test stk_test_dfbinaryop(@realpow, rand(7, 2), .1 + rand(7, 2)); ***** test stk_test_dfbinaryop(@realpow, rand(7, 2), .1); ***** error stk_test_dfbinaryop(@realpow, rand(7, 2), .1 + rand(7, 3)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/stk_normalize.m] >>>>> /<>/inst/arrays/@stk_factorialdesign/stk_normalize.m ***** test x = stk_factorialdesign ({[1 2], [5 6]}); y = stk_factorialdesign ({[0 1], [0 1]}); assert (stk_isequal_tolabs (stk_normalize (x), y)) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/ismember.m] >>>>> /<>/inst/arrays/@stk_factorialdesign/ismember.m ***** shared A, B, BB, b i_max = 10; n = 100; d = 5; A = randi (i_max, n, d); levels = repmat ({1:i_max}, 1, d); levels{4} = 1:2:i_max; B = stk_factorialdesign (levels); BB = double (B); ***** test b = ismember (A, B); ***** assert (isequal (b, ismember (A, BB))); ***** test b = ismember (A, B, 'rows'); ***** assert (isequal (b, ismember (A, BB, 'rows'))); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/uminus.m] >>>>> /<>/inst/arrays/@stk_factorialdesign/uminus.m ***** test x = stk_factorialdesign ({1:3, 1:2}); y = stk_factorialdesign ({-(1:3), -(1:2)}); assert (isequal (-x, y)) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/stk_factorialdesign.m] >>>>> /<>/inst/arrays/@stk_factorialdesign/stk_factorialdesign.m ***** test stk_test_class ('stk_factorialdesign') ***** test % constructor with two factors + column names x = stk_factorialdesign ({[0 1], [1 2 3]}, {'a', 'b'}); assert (isequal(x.colnames, {'a', 'b'})); assert (isequal(get (x, 'colnames'), {'a', 'b'})); ***** error stk_factorialdesign ('bouh'); ***** error stk_factorialdesign ({{'a' 'b'}}); ***** shared x, fmt fmt = stk_disp_getformat (); x = stk_sampling_regulargrid (3^2, 2); ***** test format rat; disp (x); : --- --- * : 0.0 0.0 * : 0.5 0.0 * : 1.0 0.0 * : 0.0 0.5 * : 0.5 0.5 * : 1.0 0.5 * : 0.0 1.0 * : 0.5 1.0 * : 1.0 1.0 ***** test format long; disp (x); : --- --- * : 0.0 0.0 * : 0.5 0.0 * : 1.0 0.0 * : 0.0 0.5 * : 0.5 0.5 * : 1.0 0.5 * : 0.0 1.0 * : 0.5 1.0 * : 1.0 1.0 ***** test format short; disp (x); format (fmt); : --- --- * : 0.0 0.0 * : 0.5 0.0 * : 1.0 0.0 * : 0.0 0.5 * : 0.5 0.5 * : 1.0 0.5 * : 0.0 1.0 * : 0.5 1.0 * : 1.0 1.0 ***** test disp (stk_sampling_regulargrid (0^1, 1)); Empty data frame with 0 rows and 0 columns ***** test disp (stk_sampling_regulargrid (0^2, 2)); Empty data frame with 0 rows and 0 columns ***** test display (x); x = <9x2 stk_factorialdesign array> : --- --- * : 0.0 0.0 * : 0.5 0.0 * : 1.0 0.0 * : 0.0 0.5 * : 0.5 0.5 * : 1.0 0.5 * : 0.0 1.0 * : 0.5 1.0 * : 1.0 1.0 ***** error length (stk_sampling_regulargrid (7^2, 2)) % not defined ***** shared x x = stk_factorialdesign ({[0 1], [0 1]}); ***** assert (isequal (x(2:end, :), x(2:4, :))) ***** assert (isequal (x(2, 1:end), x(2, :))) ***** assert (isequal (x(2:end, 2:end), x(2:4, 2))) ***** error x(1:end, 1:end, 1:end) ***** shared x, y x = stk_sampling_regulargrid (3^2, 2); y = x; ***** test %%%% vercat z = vertcat (x, y); assert (strcmp (class (z), 'stk_dataframe')); assert (isequal (double (z), [double(x); double(y)])); ***** test %%%% same thing, using cat(1, ...) z = cat (1, x, y); assert (strcmp (class (z), 'stk_dataframe')); assert (isequal (double (z), [double(x); double(y)])); ***** test %%%% horzcat y.colnames = {'y1' 'y2'}; z = horzcat (x, y); assert (strcmp (class (z), 'stk_dataframe')); assert (isequal (double (z), [double(x) double(y)])); ***** test %%%% same thing, using cat (2, ...) z = cat (2, x, y); assert (strcmp (class (z), 'stk_dataframe')); assert (isequal (double (z), [double(x) double(y)])); ***** error cat (3, x, y) ***** shared x, t x = stk_sampling_regulargrid (3^2, 2); t = double (x); ***** assert (isequal (apply (x, 1, @sum), sum (t, 1))) ***** assert (isequal (apply (x, 2, @sum), sum (t, 2))) ***** error u = apply (x, 3, @sum); ***** assert (isequal (apply (x, 1, @min, []), min (t, [], 1))) ***** assert (isequal (apply (x, 2, @min, []), min (t, [], 2))) ***** error u = apply (x, 3, @min, []); ***** assert (isequal (min (x), min (t))) ***** assert (isequal (max (x), max (t))) ***** assert (isequal (std (x), std (t))) ***** assert (isequal (var (x), var (t))) ***** assert (isequal (sum (x), sum (t))) ***** assert (isequal (mean (x), mean (t))) ***** assert (isequal (mode (x), mode (t))) ***** assert (isequal (prod (x), prod (t))) ***** assert (isequal (median (x), median (t))) ***** shared x1, x2, x3, u1, u2, u3 x1 = stk_sampling_regulargrid ([4 3], 2); u1 = double (x1); x2 = stk_sampling_regulargrid ([3 4], 2); u2 = double (x2); x3 = x1 + 1; u3 = u1 + 1; ***** test z = bsxfun (@plus, x1, u2); assert (isa (z, 'stk_dataframe') && isequal (double (z), u1 + u2)) ***** test z = bsxfun (@plus, u1, x2); assert (isa (z, 'stk_dataframe') && isequal (double (z), u1 + u2)) ***** test z = bsxfun (@plus, x1, x2); assert (isa (z, 'stk_dataframe') && isequal (double (z), u1 + u2)) ***** test z = min (x1, x2); assert (isequal (double (z), min (u1, u2))); ***** test z = max (x1, x2); assert (isequal (double (z), max (u1, u2))); ***** error z = min (x1, x2, 1); ***** error z = max (x1, x2, 1); ***** test z = x1 + x2; assert (isequal (double (z), u1 + u2)); ***** test z = x1 - x2; assert (isequal (double (z), u1 - u2)); ***** test z = x1 .* x2; assert (isequal (double (z), u1 .* u2)); ***** test z = x3 .\ x2; assert (isequal (double (z), u3 .\ u2)); ***** test z = x2 ./ x3; assert (isequal (double (z), u2 ./ u3)); ***** test z = x3 .^ x2; assert (isequal (double (z), u3 .^ u2)); ***** test z = realpow (x3, x2); assert (isequal (double (z), realpow (u3, u2))); ***** test z = (x1 == x2); assert (isequal (double (z), (u1 == u2))); ***** test z = (x1 ~= x2); assert (isequal (double (z), (u1 ~= u2))); ***** test z = (x1 <= x2); assert (isequal (double (z), (u1 <= u2))); ***** test z = (x1 >= x2); assert (isequal (double (z), (u1 >= u2))); ***** test z = (x1 < x2); assert (isequal (double (z), (u1 < u2))); ***** test z = (x1 > x2); assert (isequal (double (z), (u1 > u2))); ***** test z = x1 & x2; assert (isequal (double (z), u1 & u2)); ***** test z = x1 | x2; assert (isequal (double (z), u1 | u2)); ***** test z = xor (x1, x2); assert (isequal (double (z), xor (u1, u2))); ***** shared x x = stk_factorialdesign ({[0 1], [0 1 2]}); ***** assert (strcmp (class (x'), 'stk_dataframe')) ***** assert (strcmp (class (x.'), 'stk_dataframe')) 60 tests, 60 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/stk_boundingbox.m] >>>>> /<>/inst/arrays/@stk_factorialdesign/stk_boundingbox.m ***** shared x, y, cn cn = {'a', 'b', 'c'}; x = stk_factorialdesign ({[1 2], [3 4 5], [0 2 8]}, cn); ***** error y = stk_boundingbox (); ***** test y = stk_boundingbox (x); ***** assert (isequal (y, stk_hrect ([1 3 0; 2 5 8], cn))); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/fieldnames.m] >>>>> /<>/inst/arrays/@stk_factorialdesign/fieldnames.m ***** test x = stk_factorialdesign ({0:1, 3:5}, {'u' 'v'}); fn1 = sort (fieldnames (x)); fn2 = {'colnames', 'data', 'info', 'levels', ... 'rownames', 'stk_dataframe', 'u', 'v'}; assert (isequal (fn1, fn2)); 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/stk_rescale.m] >>>>> /<>/inst/arrays/@stk_factorialdesign/stk_rescale.m ***** test x = stk_factorialdesign ({[1 2], [5 6]}); y = stk_factorialdesign ({[0 3], [0 3]}); z = stk_rescale (x, [1 5; 2 6], [0 0; 3 3]); assert (stk_isequal_tolabs (y, z)) 1 test, 1 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/ndgrid.m] >>>>> /<>/inst/arrays/@stk_factorialdesign/ndgrid.m ***** shared data data = stk_factorialdesign ({[0 1], [5 6 7]}); ***** test % nargout = 0 ndgrid (data); assert (isequal (ans, [0 0 0; 1 1 1])); ***** test % nargout = 1 x = ndgrid (data); assert (isequal (x, [0 0 0; 1 1 1])); ***** test % nargout = 2 [x, y] = ndgrid (data); assert (isequal ({x, y}, {[0 0 0; 1 1 1], [5 6 7; 5 6 7]})); ***** error % nargout = 3 [x, y, z] = ndgrid (data); ***** test data = stk_factorialdesign ({[], []}); [x, y] = ndgrid (data); assert (isequal ({x, y}, {[], []})); ***** test data = stk_factorialdesign ({[1:3]}); x = ndgrid (data); assert (isequal (x, [1; 2; 3])); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/arrays/@stk_factorialdesign/stk_dataframe.m] >>>>> /<>/inst/arrays/@stk_factorialdesign/stk_dataframe.m ***** shared x, cn, rn, y, cn2, rn2 cn = {'x' 'y'}; rn = {'a'; 'b'; 'c'; 'd'}; x = stk_factorialdesign ({1:2, 1:2}, cn, rn); cn2 = {'xx' 'yy'}; rn2 = {'aa'; 'bb'; 'cc'; 'dd'}; ***** test y = stk_dataframe (x); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn)) ***** assert (isequal (y.rownames, rn)) ***** test y = stk_dataframe (x, cn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn2)) ***** assert (isequal (y.rownames, rn)) ***** test y = stk_dataframe (x, cn2, rn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn2)) ***** assert (isequal (y.rownames, rn2)) ***** test y = stk_dataframe (x, [], rn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, cn)) ***** assert (isequal (y.rownames, rn2)) ***** test y = stk_dataframe (x, {}, rn2); ***** assert (strcmp (class (y), 'stk_dataframe')) ***** assert (isequal (y.colnames, {})) ***** assert (isequal (y.rownames, rn2)) 20 tests, 20 passed, 0 known failure, 0 skipped [inst/covfcs/stk_materncov32_aniso.m] >>>>> /<>/inst/covfcs/stk_materncov32_aniso.m ***** shared param, x, y, K1, K2, K3 dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (6, dim); ***** error K0 = stk_materncov32_aniso (); ***** error K0 = stk_materncov32_aniso (param); ***** error K0 = stk_materncov32_aniso (param, x); ***** test K1 = stk_materncov32_aniso (param, x, y); ***** test K2 = stk_materncov32_aniso (param, x, y, -1); ***** test K3 = stk_materncov32_aniso (param, x, y, -1, false); ***** assert (isequal (K1, K2)); ***** assert (isequal (K1, K3)); ***** test % df versus ordinary array u = double (x); v = double (y); K1 = stk_materncov32_aniso (param, u, v, -1); K2 = stk_materncov32_aniso (param, stk_dataframe (u), stk_dataframe (v), -1); assert (isequal (K1, K2)); ***** error stk_materncov32_aniso (param, x, y, -2); ***** test stk_materncov32_aniso (param, x, y, -1); ***** error stk_materncov32_aniso (param, x, y, 0); ***** test stk_materncov32_aniso (param, x, y, 1); ***** test stk_materncov32_aniso (param, x, y, 2); ***** error stk_materncov32_aniso (param, x, y, 3); ***** error stk_materncov32_aniso (param, x, y, nan); ***** error stk_materncov32_aniso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5; 2.4; 2.6]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_materncov32_aniso (param, x, y); K2 = stk_materncov32_aniso (param, x, y, -1); assert (isequal (size(K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:(dim + 1), dK = stk_materncov32_aniso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_materncov32_aniso (param, x, y); K2 = stk_materncov32_aniso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:(dim + 1), dK1 = stk_materncov32_aniso (param, x, y, i); dK2 = stk_materncov32_aniso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 20 tests, 20 passed, 0 known failure, 0 skipped [inst/covfcs/stk_expcov_iso.m] >>>>> /<>/inst/covfcs/stk_expcov_iso.m ***** shared param, x, y dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (5, dim); ***** error stk_expcov_iso (); ***** error stk_expcov_iso (param); ***** error stk_expcov_iso (param, x); ***** test stk_expcov_iso (param, x, y); ***** test stk_expcov_iso (param, x, y, -1); ***** test stk_expcov_iso (param, x, y, -1, false); ***** error stk_expcov_iso (param, x, y, -2); ***** test stk_expcov_iso (param, x, y, -1); ***** error stk_expcov_iso (param, x, y, 0); ***** test stk_expcov_iso (param, x, y, 1); ***** test stk_expcov_iso (param, x, y, 2); ***** error stk_expcov_iso (param, x, y, 3); ***** error stk_expcov_iso (param, x, y, nan); ***** error stk_expcov_iso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_expcov_iso (param, x, y); K2 = stk_expcov_iso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:2, dK = stk_expcov_iso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_expcov_iso (param, x, y); K2 = stk_expcov_iso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:2, dK1 = stk_expcov_iso (param, x, y, i); dK2 = stk_expcov_iso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 17 tests, 17 passed, 0 known failure, 0 skipped [inst/covfcs/stk_materncov32_iso.m] >>>>> /<>/inst/covfcs/stk_materncov32_iso.m ***** shared param, x, y dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (5, dim); ***** error stk_materncov32_iso (); ***** error stk_materncov32_iso (param); ***** error stk_materncov32_iso (param, x); ***** test stk_materncov32_iso (param, x, y); ***** test stk_materncov32_iso (param, x, y, -1); ***** test stk_materncov32_iso (param, x, y, -1, false); ***** error stk_materncov32_iso (param, x, y, -2); ***** test stk_materncov32_iso (param, x, y, -1); ***** error stk_materncov32_iso (param, x, y, 0); ***** test stk_materncov32_iso (param, x, y, 1); ***** test stk_materncov32_iso (param, x, y, 2); ***** error stk_materncov32_iso (param, x, y, 3); ***** error stk_materncov32_iso (param, x, y, nan); ***** error stk_materncov32_iso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_materncov32_iso (param, x, y); K2 = stk_materncov32_iso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:2, dK = stk_materncov32_iso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_materncov32_iso (param, x, y); K2 = stk_materncov32_iso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:2, dK1 = stk_materncov32_iso (param, x, y, i); dK2 = stk_materncov32_iso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 17 tests, 17 passed, 0 known failure, 0 skipped [inst/covfcs/stk_materncov52_aniso.m] >>>>> /<>/inst/covfcs/stk_materncov52_aniso.m ***** shared param, x, y dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (5, dim); ***** error stk_materncov52_aniso (); ***** error stk_materncov52_aniso (param); ***** error stk_materncov52_aniso (param, x); ***** test stk_materncov52_aniso (param, x, y); ***** test stk_materncov52_aniso (param, x, y, -1); ***** test stk_materncov52_aniso (param, x, y, -1, false); ***** error stk_materncov52_aniso (param, x, y, -2); ***** test stk_materncov52_aniso (param, x, y, -1); ***** error stk_materncov52_aniso (param, x, y, 0); ***** test stk_materncov52_aniso (param, x, y, 1); ***** test stk_materncov52_aniso (param, x, y, 2); ***** error stk_materncov52_aniso (param, x, y, 3); ***** error stk_materncov52_aniso (param, x, y, nan); ***** error stk_materncov52_aniso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5; 2.4; 2.6]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_materncov52_aniso (param, x, y); K2 = stk_materncov52_aniso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:(dim + 1), dK = stk_materncov52_aniso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_materncov52_aniso (param, x, y); K2 = stk_materncov52_aniso(param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:(dim + 1), dK1 = stk_materncov52_aniso (param, x, y, i); dK2 = stk_materncov52_aniso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 17 tests, 17 passed, 0 known failure, 0 skipped [inst/covfcs/stk_materncov52_iso.m] >>>>> /<>/inst/covfcs/stk_materncov52_iso.m ***** shared param, x, y dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (5, dim); ***** error stk_materncov52_iso (); ***** error stk_materncov52_iso (param); ***** error stk_materncov52_iso (param, x); ***** test stk_materncov52_iso (param, x, y); ***** test stk_materncov52_iso (param, x, y, -1); ***** test stk_materncov52_iso (param, x, y, -1, false); ***** error stk_materncov52_iso (param, x, y, -2); ***** test stk_materncov52_iso (param, x, y, -1); ***** error stk_materncov52_iso (param, x, y, 0); ***** test stk_materncov52_iso (param, x, y, 1); ***** test stk_materncov52_iso (param, x, y, 2); ***** error stk_materncov52_iso (param, x, y, 3); ***** error stk_materncov52_iso (param, x, y, nan); ***** error stk_materncov52_iso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_materncov52_iso (param, x, y); K2 = stk_materncov52_iso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:2, dK = stk_materncov52_iso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_materncov52_iso (param, x, y); K2 = stk_materncov52_iso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:2, dK1 = stk_materncov52_iso (param, x, y, i); dK2 = stk_materncov52_iso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 17 tests, 17 passed, 0 known failure, 0 skipped [inst/covfcs/rbf/stk_rbf_matern.m] >>>>> /<>/inst/covfcs/rbf/stk_rbf_matern.m ***** shared nu, h, diff nu = 1.0; h = 1.0; diff = -1; ***** error stk_rbf_matern (); ***** error stk_rbf_matern (nu); ***** test stk_rbf_matern (nu, h); ***** test stk_rbf_matern (nu, h, diff); ***** test %% h = 0.0 => correlation = 1.0 for nu = 0.1:0.2:5.0, x = stk_rbf_matern (nu, 0.0); assert (stk_isequal_tolrel (x, 1.0, 1e-8)); end 5 tests, 5 passed, 0 known failure, 0 skipped [inst/covfcs/rbf/stk_rbf_gauss.m] >>>>> /<>/inst/covfcs/rbf/stk_rbf_gauss.m ***** shared h, diff h = 1.0; diff = -1; ***** error stk_rbf_gauss (); ***** test stk_rbf_gauss (h); ***** test stk_rbf_gauss (h, diff); ***** test % h = 0.0 => correlation = 1.0 x = stk_rbf_gauss (0.0); assert (stk_isequal_tolrel (x, 1.0, 1e-8)); 4 tests, 4 passed, 0 known failure, 0 skipped [inst/covfcs/rbf/stk_rbf_matern52.m] >>>>> /<>/inst/covfcs/rbf/stk_rbf_matern52.m ***** shared h, diff h = 1.0; diff = -1; ***** error stk_rbf_matern52 (); ***** test stk_rbf_matern52 (h); ***** test stk_rbf_matern52 (h, diff); ***** test %% h = 0.0 => correlation = 1.0 x = stk_rbf_matern52 (0.0); assert (stk_isequal_tolrel (x, 1.0, 1e-8)); ***** test %% consistency with stk_rbf_matern: function values for h = 0.1:0.1:2.0, x = stk_rbf_matern (5/2, h); y = stk_rbf_matern52 (h); assert (stk_isequal_tolrel (x, y, 1e-8)); end ***** test %% consistency with stk_rbf_matern: derivatives for h = 0.1:0.1:2.0, x = stk_rbf_matern (5/2, h, 2); y = stk_rbf_matern52 (h, 1); assert (stk_isequal_tolrel (x, y, 1e-8)); end ***** assert (stk_rbf_matern52 (inf) == 0) 7 tests, 7 passed, 0 known failure, 0 skipped [inst/covfcs/rbf/stk_rbf_spherical.m] >>>>> /<>/inst/covfcs/rbf/stk_rbf_spherical.m ***** shared h, diff h = 1.0; diff = -1; ***** error stk_rbf_spherical (); ***** test stk_rbf_spherical (h); ***** test stk_rbf_spherical (h, diff); ***** test %% h = 0.0 => correlation = 1.0 x = stk_rbf_spherical (0.0); assert (stk_isequal_tolrel (x, 1.0, 1e-8)); ***** test %% check derivative numerically h = [-1 -0.5 -0.1 0.1 0.5 1]; delta = 1e-9; d1 = (stk_rbf_spherical (h + delta) - stk_rbf_spherical (h)) / delta; d2 = stk_rbf_spherical (h, 1); assert (stk_isequal_tolabs (d1, d2, 1e-4)); ***** assert (stk_rbf_spherical (inf) == 0) 6 tests, 6 passed, 0 known failure, 0 skipped [inst/covfcs/rbf/stk_rbf_exponential.m] >>>>> /<>/inst/covfcs/rbf/stk_rbf_exponential.m ***** shared h, diff h = 1.0; diff = -1; ***** error stk_rbf_exponential (); ***** test stk_rbf_exponential (h); ***** test stk_rbf_exponential (h, diff); ***** test %% h = 0.0 => correlation = 1.0 x = stk_rbf_exponential (0.0); assert (stk_isequal_tolrel (x, 1.0, 1e-8)); ***** test %% check derivative numerically h = [-1 -0.5 -0.1 0.1 0.5 1]; delta = 1e-9; d1 = (stk_rbf_exponential (h + delta) - stk_rbf_exponential (h)) / delta; d2 = stk_rbf_exponential (h, 1); assert (stk_isequal_tolabs (d1, d2, 1e-4)); ***** test %% consistency with stk_rbf_matern: function values for h = 0.1:0.1:2.0, x = stk_rbf_matern (1/2, h); y = stk_rbf_exponential (h); assert (stk_isequal_tolrel (x, y, 1e-8)); end ***** test %% consistency with stk_rbf_matern: derivatives for h = 0.1:0.1:2.0, x = stk_rbf_matern (1/2, h, 2); y = stk_rbf_exponential (h, 1); assert (stk_isequal_tolrel (x, y, 1e-8)); end ***** assert (stk_rbf_exponential (inf) == 0) 8 tests, 8 passed, 0 known failure, 0 skipped [inst/covfcs/rbf/stk_rbf_matern32.m] >>>>> /<>/inst/covfcs/rbf/stk_rbf_matern32.m ***** shared h, diff h = 1.0; diff = -1; ***** error stk_rbf_matern32 (); ***** test stk_rbf_matern32 (h); ***** test stk_rbf_matern32 (h, diff); ***** test %% h = 0.0 => correlation = 1.0 x = stk_rbf_matern32 (0.0); assert (stk_isequal_tolrel (x, 1.0, 1e-8)); ***** test %% consistency with stk_rbf_matern: function values for h = 0.1:0.1:2.0, x = stk_rbf_matern (3/2, h); y = stk_rbf_matern32 (h); assert (stk_isequal_tolrel (x, y, 1e-8)); end ***** test %% consistency with stk_rbf_matern: derivatives for h = 0.1:0.1:2.0, x = stk_rbf_matern (3/2, h, 2); y = stk_rbf_matern32 (h, 1); assert (stk_isequal_tolrel (x, y, 1e-8)); end ***** assert (stk_rbf_matern32 (inf) == 0) 7 tests, 7 passed, 0 known failure, 0 skipped [inst/covfcs/stk_noisecov.m] >>>>> /<>/inst/covfcs/stk_noisecov.m ***** shared ni, lognoisevariance, diff ni = 5; lognoisevariance = 0.0; diff = -1; ***** error K = stk_noisecov (); ***** error K = stk_noisecov (ni); ***** test K = stk_noisecov (ni, lognoisevariance); ***** test K = stk_noisecov (ni, lognoisevariance, diff); ***** test K = stk_noisecov (ni, lognoisevariance, diff, true); 5 tests, 5 passed, 0 known failure, 0 skipped [inst/covfcs/stk_expcov_aniso.m] >>>>> /<>/inst/covfcs/stk_expcov_aniso.m ***** shared param, x, y, K1, K2, K3 dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (6, dim); ***** error K0 = stk_expcov_aniso (); ***** error K0 = stk_expcov_aniso (param); ***** error K0 = stk_expcov_aniso (param, x); ***** test K1 = stk_expcov_aniso (param, x, y); ***** test K2 = stk_expcov_aniso (param, x, y, -1); ***** test K3 = stk_expcov_aniso (param, x, y, -1, false); ***** assert (isequal (K1, K2)); ***** assert (isequal (K1, K3)); ***** test % df versus ordinary array u = double (x); v = double (y); K1 = stk_expcov_aniso (param, u, v, -1); K2 = stk_expcov_aniso (param, stk_dataframe (u), stk_dataframe (v), -1); ***** error stk_expcov_aniso (param, x, y, -2); ***** test stk_expcov_aniso (param, x, y, -1); ***** error stk_expcov_aniso (param, x, y, 0); ***** test stk_expcov_aniso (param, x, y, 1); ***** test stk_expcov_aniso (param, x, y, 2); ***** error stk_expcov_aniso (param, x, y, 3); ***** error stk_expcov_aniso (param, x, y, nan); ***** error stk_expcov_aniso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5; 2.4; 2.6]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_expcov_aniso (param, x, y); K2 = stk_expcov_aniso (param, x, y, -1); assert (isequal (size(K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:(dim + 1), dK = stk_expcov_aniso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_expcov_aniso (param, x, y); K2 = stk_expcov_aniso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:(dim + 1), dK1 = stk_expcov_aniso (param, x, y, i); dK2 = stk_expcov_aniso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 20 tests, 20 passed, 0 known failure, 0 skipped [inst/covfcs/stk_sphcov_aniso.m] >>>>> /<>/inst/covfcs/stk_sphcov_aniso.m ***** shared param, x, y, K1, K2, K3 dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (6, dim); ***** error K0 = stk_sphcov_aniso (); ***** error K0 = stk_sphcov_aniso (param); ***** error K0 = stk_sphcov_aniso (param, x); ***** test K1 = stk_sphcov_aniso (param, x, y); ***** test K2 = stk_sphcov_aniso (param, x, y, -1); ***** test K3 = stk_sphcov_aniso (param, x, y, -1, false); ***** assert (isequal (K1, K2)); ***** assert (isequal (K1, K3)); ***** test % df versus ordinary array u = double (x); v = double (y); K1 = stk_sphcov_aniso (param, u, v, -1); K2 = stk_sphcov_aniso (param, stk_dataframe (u), stk_dataframe (v), -1); assert (isequal (K1, K2)); ***** error stk_sphcov_aniso (param, x, y, -2); ***** test stk_sphcov_aniso (param, x, y, -1); ***** error stk_sphcov_aniso (param, x, y, 0); ***** test stk_sphcov_aniso (param, x, y, 1); ***** test stk_sphcov_aniso (param, x, y, 2); ***** error stk_sphcov_aniso (param, x, y, 3); ***** error stk_sphcov_aniso (param, x, y, nan); ***** error stk_sphcov_aniso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5; 2.4; 2.6]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_sphcov_aniso (param, x, y); K2 = stk_sphcov_aniso (param, x, y, -1); assert (isequal (size(K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:(dim + 1), dK = stk_sphcov_aniso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_sphcov_aniso (param, x, y); K2 = stk_sphcov_aniso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:(dim + 1), dK1 = stk_sphcov_aniso (param, x, y, i); dK2 = stk_sphcov_aniso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 20 tests, 20 passed, 0 known failure, 0 skipped [inst/covfcs/stk_materncov_iso.m] >>>>> /<>/inst/covfcs/stk_materncov_iso.m ***** shared param, x, y dim = 1; param = log ([1.0; 1.5; 2.9]); x = stk_sampling_randunif(5, dim); y = stk_sampling_randunif(5, dim); ***** error stk_materncov_iso(); ***** error stk_materncov_iso(param); ***** error stk_materncov_iso(param, x); ***** test stk_materncov_iso(param, x, y); ***** test stk_materncov_iso(param, x, y, -1); ***** test stk_materncov_iso(param, x, y, -1, false); ***** error stk_materncov_iso(param, x, y, -2); ***** test stk_materncov_iso(param, x, y, -1); ***** error stk_materncov_iso(param, x, y, 0); ***** test stk_materncov_iso(param, x, y, 1); ***** test stk_materncov_iso(param, x, y, 2); ***** test stk_materncov_iso(param, x, y, 3); ***** error stk_materncov_iso(param, x, y, 4); ***** error stk_materncov_iso(param, x, y, nan); ***** error stk_materncov_iso(param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 1.5; 2.9]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_materncov_iso (param, x, y); K2 = stk_materncov_iso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:3, dK = stk_materncov_iso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif(n, dim); y = stk_sampling_randunif(n, dim); K1 = stk_materncov_iso(param, x, y); K2 = stk_materncov_iso(param, x, y, -1, true); assert(isequal(size(K1), [n n])); assert(stk_isequal_tolabs(K2, diag(K1))); for i = 1:3, dK1 = stk_materncov_iso(param, x, y, i); dK2 = stk_materncov_iso(param, x, y, i, true); assert(isequal(size(dK1), [n n])); assert(stk_isequal_tolabs(dK2, diag(dK1))); end 18 tests, 18 passed, 0 known failure, 0 skipped [inst/covfcs/stk_materncov_aniso.m] >>>>> /<>/inst/covfcs/stk_materncov_aniso.m ***** shared param, x, y dim = 1; param = log ([1.0; 1.5; 2.8]); x = stk_sampling_randunif(5, dim); y = stk_sampling_randunif(5, dim); ***** error stk_materncov_aniso(); ***** error stk_materncov_aniso(param); ***** error stk_materncov_aniso(param, x); ***** test stk_materncov_aniso(param, x, y); ***** test stk_materncov_aniso(param, x, y, -1); ***** test stk_materncov_aniso(param, x, y, -1, false); ***** error stk_materncov_aniso(param, x, y, -2); ***** test stk_materncov_aniso(param, x, y, -1); ***** error stk_materncov_aniso(param, x, y, 0); ***** test stk_materncov_aniso(param, x, y, 1); ***** test stk_materncov_aniso(param, x, y, 2); ***** test stk_materncov_aniso(param, x, y, 3); ***** error stk_materncov_aniso(param, x, y, 4); ***** error stk_materncov_aniso(param, x, y, nan); ***** error stk_materncov_aniso(param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 1.5; 2.8; 2.7; 2.9]); nx = 4; ny = 10; x = stk_sampling_randunif(nx, dim); y = stk_sampling_randunif(ny, dim); ***** test K1 = stk_materncov_aniso(param, x, y); K2 = stk_materncov_aniso(param, x, y, -1); assert(isequal(size(K1), [nx ny])); assert(stk_isequal_tolabs(K1, K2)); ***** test for i = 1:(dim+2), dK = stk_materncov_aniso(param, x, y, i); assert(isequal(size(dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif(n, dim); y = stk_sampling_randunif(n, dim); K1 = stk_materncov_aniso(param, x, y); K2 = stk_materncov_aniso(param, x, y, -1, true); assert(isequal(size(K1), [n n])); assert(stk_isequal_tolabs(K2, diag(K1))); for i = 1:(dim+2), dK1 = stk_materncov_aniso(param, x, y, i); dK2 = stk_materncov_aniso(param, x, y, i, true); assert(isequal(size(dK1), [n n])); assert(stk_isequal_tolabs(dK2, diag(dK1))); end 18 tests, 18 passed, 0 known failure, 0 skipped [inst/covfcs/stk_sphcov_iso.m] >>>>> /<>/inst/covfcs/stk_sphcov_iso.m ***** shared param, x, y dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (5, dim); ***** error stk_sphcov_iso (); ***** error stk_sphcov_iso (param); ***** error stk_sphcov_iso (param, x); ***** test stk_sphcov_iso (param, x, y); ***** test stk_sphcov_iso (param, x, y, -1); ***** test stk_sphcov_iso (param, x, y, -1, false); ***** error stk_sphcov_iso (param, x, y, -2); ***** test stk_sphcov_iso (param, x, y, -1); ***** error stk_sphcov_iso (param, x, y, 0); ***** test stk_sphcov_iso (param, x, y, 1); ***** test stk_sphcov_iso (param, x, y, 2); ***** error stk_sphcov_iso (param, x, y, 3); ***** error stk_sphcov_iso (param, x, y, nan); ***** error stk_sphcov_iso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_sphcov_iso (param, x, y); K2 = stk_sphcov_iso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:2, dK = stk_sphcov_iso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_sphcov_iso (param, x, y); K2 = stk_sphcov_iso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:2, dK1 = stk_sphcov_iso (param, x, y, i); dK2 = stk_sphcov_iso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 17 tests, 17 passed, 0 known failure, 0 skipped [inst/covfcs/stk_gausscov_aniso.m] >>>>> /<>/inst/covfcs/stk_gausscov_aniso.m ***** shared param, x, y, K1, K2, K3 dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (6, dim); ***** error K0 = stk_gausscov_aniso (); ***** error K0 = stk_gausscov_aniso (param); ***** error K0 = stk_gausscov_aniso (param, x); ***** test K1 = stk_gausscov_aniso (param, x, y); ***** test K2 = stk_gausscov_aniso (param, x, y, -1); ***** test K3 = stk_gausscov_aniso (param, x, y, -1, false); ***** assert (isequal (K1, K2)); ***** assert (isequal (K1, K3)); ***** test % df versus ordinary array u = double (x); v = double (y); K1 = stk_gausscov_aniso (param, u, v, -1); K2 = stk_gausscov_aniso (param, stk_dataframe (u), stk_dataframe (v), -1); ***** error stk_gausscov_aniso (param, x, y, -2); ***** test stk_gausscov_aniso (param, x, y, -1); ***** error stk_gausscov_aniso (param, x, y, 0); ***** test stk_gausscov_aniso (param, x, y, 1); ***** test stk_gausscov_aniso (param, x, y, 2); ***** error stk_gausscov_aniso (param, x, y, 3); ***** error stk_gausscov_aniso (param, x, y, nan); ***** error stk_gausscov_aniso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5; 2.4; 2.6]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_gausscov_aniso (param, x, y); K2 = stk_gausscov_aniso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:(dim + 1), dK = stk_gausscov_aniso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_gausscov_aniso (param, x, y); K2 = stk_gausscov_aniso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:(dim + 1), dK1 = stk_gausscov_aniso (param, x, y, i); dK2 = stk_gausscov_aniso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 20 tests, 20 passed, 0 known failure, 0 skipped [inst/covfcs/stk_discretecov.m] >>>>> /<>/inst/covfcs/stk_discretecov.m ***** shared model, model2, x0 n0 = 20; n1 = 10; dim = 4; x0 = stk_sampling_randunif (n0, dim); x1 = stk_sampling_randunif (n1, dim); model = stk_model ('stk_materncov52_aniso', dim); model.lm = stk_lm_affine (); model.param = log ([1.0; 2.1; 2.2; 2.3; 2.4]); ***** test % without noise, pairwise = false model.lognoisevariance = - inf; model2 = stk_model ('stk_discretecov', model, x0); idx = [1 4 9]; [K1, P1] = stk_make_matcov (model, x0(idx, :)); [K2, P2] = stk_make_matcov (model2, idx'); assert (stk_isequal_tolrel (K1, K2)); assert (stk_isequal_tolrel (P1, P2)); ***** test % without noise, pairwise = true K1 = stk_make_matcov (model, x0([2 5 6], :), [], true); K2 = stk_make_matcov (model2, [2 5 6]', [], true); assert (stk_isequal_tolrel (K1, K2)); ***** test % with noise, pairwise = false model.lognoisevariance = log (0.01); model2 = stk_model ('stk_discretecov', model, x0); idx = [1 4 9]; [K1, P1] = stk_make_matcov (model, x0(idx, :)); [K2, P2] = stk_make_matcov (model2, idx'); assert (stk_isequal_tolrel (K1, K2)); assert (stk_isequal_tolrel (P1, P2)); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/covfcs/stk_gausscov_iso.m] >>>>> /<>/inst/covfcs/stk_gausscov_iso.m ***** shared param, x, y dim = 1; param = log ([1.0; 2.5]); x = stk_sampling_randunif (5, dim); y = stk_sampling_randunif (5, dim); ***** error stk_gausscov_iso (); ***** error stk_gausscov_iso (param); ***** error stk_gausscov_iso (param, x); ***** test stk_gausscov_iso (param, x, y); ***** test stk_gausscov_iso (param, x, y, -1); ***** test stk_gausscov_iso (param, x, y, -1, false); ***** error stk_gausscov_iso (param, x, y, -2); ***** test stk_gausscov_iso (param, x, y, -1); ***** error stk_gausscov_iso (param, x, y, 0); ***** test stk_gausscov_iso (param, x, y, 1); ***** test stk_gausscov_iso (param, x, y, 2); ***** error stk_gausscov_iso (param, x, y, 3); ***** error stk_gausscov_iso (param, x, y, nan); ***** error stk_gausscov_iso (param, x, y, inf); ***** shared dim, param, x, y, nx, ny dim = 3; param = log ([1.0; 2.5]); nx = 4; ny = 10; x = stk_sampling_randunif (nx, dim); y = stk_sampling_randunif (ny, dim); ***** test K1 = stk_gausscov_iso (param, x, y); K2 = stk_gausscov_iso (param, x, y, -1); assert (isequal (size (K1), [nx ny])); assert (stk_isequal_tolabs (K1, K2)); ***** test for i = 1:2, dK = stk_gausscov_iso (param, x, y, i); assert (isequal (size (dK), [nx ny])); end ***** test n = 7; x = stk_sampling_randunif (n, dim); y = stk_sampling_randunif (n, dim); K1 = stk_gausscov_iso (param, x, y); K2 = stk_gausscov_iso (param, x, y, -1, true); assert (isequal (size (K1), [n n])); assert (stk_isequal_tolabs (K2, diag (K1))); for i = 1:2, dK1 = stk_gausscov_iso (param, x, y, i); dK2 = stk_gausscov_iso (param, x, y, i, true); assert (isequal (size (dK1), [n n])); assert (stk_isequal_tolabs (dK2, diag (dK1))); end 17 tests, 17 passed, 0 known failure, 0 skipped [inst/core/stk_model_update.m] >>>>> /<>/inst/core/stk_model_update.m ***** test x1 = (linspace (0, 1, 15))'; z1 = sin (x1); x2 = (linspace (2, 3, 15))'; z2 = sin (x2); xt = (linspace (1, 2, 15))'; zt = sin (xt); % Prior model M0 = stk_model ('stk_materncov32_iso'); M0.param = log ([1.0; 2.1]); M1 = stk_model_update (M0, x1, z1); M1 = stk_model_update (M1, x2, z2); % this calls @stk_model_gpposterior/... zp1 = stk_predict (M1, xt); M2 = stk_model_gpposterior (M0, [x1; x2], [z1; z2]); zp2 = stk_predict (M2, xt); assert (stk_isequal_tolabs (double (zp2 - zp1), zeros (15, 2), 1e-10)) 1 test, 1 passed, 0 known failure, 0 skipped [inst/core/stk_predict.m] >>>>> /<>/inst/core/stk_predict.m ***** shared n, m, model, x0, x_obs, z_obs, x_prd, y_prd1, idx_obs, idx_prd n = 10; % number of observations m = n + 1; % number of predictions d = 1; % dimension of the input space x0 = stk_sampling_regulargrid(n+m, d, [0; pi]); idx_obs = (2:2:(n+m-1))'; idx_prd = (1:2:(n+m))'; x_obs = x0(idx_obs); z_obs = sin (double (x_obs)); x_prd = x0(idx_prd); model = stk_model ('stk_materncov32_iso'); model.param = log ([1.0; 2.1]); ***** error y_prd1 = stk_predict (); ***** error y_prd1 = stk_predict (model); ***** error y_prd1 = stk_predict (model, x_obs); ***** error y_prd1 = stk_predict (model, x_obs, z_obs); ***** test y_prd1 = stk_predict (model, x_obs, z_obs, x_prd); ***** error y_prd1 = stk_predict (model, [x_obs; x_obs], [z_obs; z_obs], x_prd); ***** test % nargout = 2 [y_prd1, lambda] = stk_predict (model, x_obs, z_obs, x_prd); assert (isequal (size (lambda), [n m])); ***** test % nargout = 2, compute only variances [y_prd1, lambda] = stk_predict (model, x_obs, [], x_prd); assert (isequal (size (lambda), [n m])); assert (all (isnan (y_prd1.mean))); ***** test % nargout = 3 [y_prd1, lambda, mu] = stk_predict (model, x_obs, z_obs, x_prd); assert (isequal (size (lambda), [n m])); assert (isequal (size (mu), [1 m])); % ordinary kriging ***** test % nargout = 4 [y_prd1, lambda, mu, K] = stk_predict (model, x_obs, z_obs, x_prd); assert (isequal (size (lambda), [n m])); assert (isequal (size (mu), [1 m])); % ordinary kriging assert (isequal (size (K), [m m])); ***** test % predict on large set of locations x_prd = stk_sampling_regulargrid (1e5, 1, [0; pi]); y_prd = stk_predict (model, x_obs, z_obs, x_prd); ***** test % predict on an observation point % https://sourceforge.net/p/kriging/tickets/49/ [zp, lambda] = stk_predict (model, x_obs, z_obs, x_obs(4)); assert (isequal (z_obs(4), zp.mean)) assert (isequal (zp.var, 0)) lambda_ref = zeros (n, 1); lambda_ref(4) = 1; assert (isequal (lambda, lambda_ref)) 12 tests, 12 passed, 0 known failure, 0 skipped [inst/core/@stk_kreq_qr/stk_kreq_qr.m] >>>>> /<>/inst/core/@stk_kreq_qr/stk_kreq_qr.m ***** test stk_test_class ('stk_kreq_qr') 1 test, 1 passed, 0 known failure, 0 skipped [inst/core/@stk_kreq_qr/stk_update.m] >>>>> /<>/inst/core/@stk_kreq_qr/stk_update.m ***** shared model, x, y model = stk_model ('stk_materncov32_iso', 1); model.param = log ([1.0; 2.8]); x = [1.2; 0.3; -1.9]; y = 0.0; ***** test kreqA = stk_kreq_qr (model, x); [Kii, Pi] = stk_make_matcov (model, x); kreqB = stk_kreq_qr (model, x(1)); kreqB = stk_update (kreqB, Kii(2, 2), Kii(2, 1), Pi(2)); kreqB = stk_update (kreqB, Kii(3, 3), Kii(3, [1 2]), Pi(3)); assert (stk_isequal_tolabs (kreqA, kreqB, 3 * eps)) ***** test kreqA = stk_kreq_qr (model, x, y); [Kii, Pi] = stk_make_matcov (model, x); [Kti, Pt] = stk_make_matcov (model, y, x); kreqB = stk_kreq_qr (model, x(1), y); kreqB = stk_update (kreqB, Kii(2, 2), Kii(2, 1), Pi(2), Kti(2)); kreqB = stk_update (kreqB, Kii(3, 3), Kii(3, [1 2]), Pi(3), Kti(3)); assert (stk_isequal_tolabs (kreqA, kreqB, 3 * eps)) 2 tests, 2 passed, 0 known failure, 0 skipped [inst/core/stk_predict_leaveoneout.m] >>>>> /<>/inst/core/stk_predict_leaveoneout.m ***** shared n, x_obs, z_obs, model n = 20; x_obs = stk_sampling_regulargrid (n, 1, [0; 2*pi]); z_obs = stk_feval (@sin, x_obs); model = stk_model ('stk_materncov32_iso'); model.param = log ([1; 5]); ***** test % one output loo_pred = stk_predict_leaveoneout (model, x_obs, z_obs); assert (isequal (size (loo_pred), [n 2])); assert (isequal (loo_pred.colnames, {'mean', 'var'})); assert (all (isfinite (loo_pred(:)))); ***** test % two outputs [loo_pred, loo_res] = stk_predict_leaveoneout (model, x_obs, z_obs); assert (isequal (size (loo_pred), [n 2])); assert (isequal (loo_pred.colnames, {'mean', 'var'})); assert (all (isfinite (loo_pred(:)))); assert (isequal (size (loo_res), [n 2])); assert (isequal (loo_res.colnames, {'residuals', 'norm_res'})); assert (all (isfinite (loo_res(:)))); ***** test % heteroscedastic noise case model.lognoisevariance = (1 + rand (n, 1)) * 1e-6; [loo_pred, loo_res] = stk_predict_leaveoneout (model, x_obs, z_obs); assert (isequal (size (loo_pred), [n 2])); assert (isequal (loo_pred.colnames, {'mean', 'var'})); assert (all (isfinite (loo_pred(:)))); assert (isequal (size (loo_res), [n 2])); assert (isequal (loo_res.colnames, {'residuals', 'norm_res'})); assert (all (isfinite (loo_res(:)))); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/core/stk_make_matcov.m] >>>>> /<>/inst/core/stk_make_matcov.m ***** shared model, model2, x0, x1, n0, n1, d, Ka, Kb, Kc, Pa, Pb, Pc n0 = 20; n1 = 10; d = 4; model = stk_model ('stk_materncov52_aniso', d); model.lm = stk_lm_affine; model.param = log ([1.0; 2.1; 2.2; 2.3; 2.4]); model2 = model; model2.lognoisevariance = log(0.01); x0 = stk_sampling_randunif (n0, d); x1 = stk_sampling_randunif (n1, d); ***** error [KK, PP] = stk_make_matcov (); ***** error [KK, PP] = stk_make_matcov (model); ***** test [Ka, Pa] = stk_make_matcov (model, x0); % (1) ***** test [Kb, Pb] = stk_make_matcov (model, x0, x0); % (2) ***** test [Kc, Pc] = stk_make_matcov (model, x0, x1); % (3) ***** error [KK, PP] = stk_make_matcov (model, x0, x1, pi); ***** assert (isequal (size (Ka), [n0 n0])); ***** assert (isequal (size (Kb), [n0 n0])); ***** assert (isequal (size (Kc), [n0 n1])); ***** assert (isequal (size (Pa), [n0 d + 1])); ***** assert (isequal (size (Pb), [n0 d + 1])); ***** assert (isequal (size (Pc), [n0 d + 1])); ***** assert (isequal (Kb, Ka)); ***** test [Ka, Pa] = stk_make_matcov (model2, x0); % (1') ***** test [Kb, Pb] = stk_make_matcov (model2, x0, x0); % (2') ***** error assert (isequal (Kb, Ka)); ***** assert (isequal (Pa, Pb)); ***** assert (isequal (Pa, Pc)); 18 tests, 18 passed, 0 known failure, 0 skipped [inst/core/stk_cholcov.m] >>>>> /<>/inst/core/stk_cholcov.m ***** shared Q, K, L, U, epsi Q = 0.25 * hadamard(4); ***** test K = Q * diag ([1, 0.1, 0.01, 1e-7]) * Q'; [U, epsi] = stk_cholcov (K); ***** assert (istriu (U)) ***** assert (epsi == 0) ***** test K = Q * diag ([1, 0.1, 0.01, 1e-7]) * Q'; [L, epsi] = stk_cholcov (K, 'lower'); ***** assert (istril (L)) ***** assert (epsi == 0) ***** test K = Q * diag ([1, 0.1, 0.01, -1e-7]) * Q'; [U, epsi] = stk_cholcov (K); ***** assert (istriu (U)) ***** assert (epsi > 0) ***** test K = Q * diag ([1, 0.1, 0.01, -1e-7]) * Q'; [L, epsi] = stk_cholcov (K, 'lower'); ***** assert (istril (L)) ***** assert (epsi > 0) 12 tests, 12 passed, 0 known failure, 0 skipped [inst/param/estim/stk_param_init.m] >>>>> /<>/inst/param/estim/stk_param_init.m ***** test xi = (1:10)'; zi = sin (xi); model = stk_model ('stk_materncov52_iso'); model.param = stk_param_init (model, xi, zi, [1; 10], false); xt = (1:9)' + 0.5; zt = sin (xt); zp = stk_predict (model, xi, zi, xt); assert (sum ((zt - zp.mean) .^ 2) < 1e-3); ***** test % check equivariance of parameter estimates f = @(x) sin (x); xi = stk_sampling_regulargrid (10, 1); zi = stk_feval (f, xi); shift = 1000; scale = 0.01; model = stk_model ('stk_materncov32_iso'); p1 = stk_param_init (model, xi, zi); p2 = stk_param_init (model, xi, shift + scale .* zi); assert (stk_isequal_tolabs (p2(1), p1(1) + log (scale^2), 1e-10)) assert (stk_isequal_tolabs (p2(2), p1(2), eps)) ***** shared xi, zi, BOX, xt, zt f = @(x)(- (0.8 * x + sin (5 * x + 1) + 0.1 * sin (10 * x))); DIM = 1; % Dimension of the factor space BOX = [-1.0; 1.0]; % Factor space xi = stk_sampling_regulargrid (20, DIM, BOX); % Evaluation points zi = stk_feval (f, xi); % Evaluation results NT = 400; % Number of points in the grid xt = stk_sampling_regulargrid (NT, DIM, BOX); % Generate a regular grid zt = stk_feval (f, xt); % Values of f on the grid ***** xtest % This test is known to fail in Debian buster i386 % because of a known problem in Octave's sqp/qp functions % http://savannah.gnu.org/bugs/?38875 model = stk_model ('stk_materncov_iso'); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** test model = stk_model ('stk_materncov_aniso'); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** test model = stk_model ('stk_materncov32_iso'); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** test model = stk_model ('stk_materncov32_aniso'); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** test model = stk_model ('stk_materncov52_iso'); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** test model = stk_model ('stk_materncov52_aniso'); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** test model = stk_model ('stk_gausscov_iso'); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) warning: matrix singular to machine precision, rcond = 5.11775e-18 ***** test model = stk_model ('stk_gausscov_aniso'); [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (max ((zp.mean - zt) .^ 2) < 1e-3) warning: matrix singular to machine precision, rcond = 5.17983e-18 ***** test % Homoscedastic case / do_estim_lnv = true model = stk_model ('stk_materncov32_iso'); [model.param, model.lognoisevariance] = ... stk_param_init (model, xi, zi, BOX, true); [model.param, model.lognoisevariance] = ... stk_param_estim (model, xi, zi); zp = stk_predict (model, xi, zi, xt); assert (model.lognoisevariance > -inf); assert (max ((zp.mean - zt) .^ 2) < 1e-3) warning: This way of setting do_estim_lnv is deprecated ***** error % Homoscedastic case / do_estim_lnv = false / model.lnv = nan model = stk_model ('stk_materncov32_iso'); model.lognoisevariance = nan; % not compatible with do_estim_lnv == false [model.param, model.lognoisevariance] = ... stk_param_init (model, xi, zi, BOX, false); ***** test % Heteroscedastic case / known noise variance model = stk_model ('stk_materncov32_iso'); lnv = log ((100 + rand (size (zi))) / 1e6); model.lognoisevariance = lnv; % here we say that lnv is known [param0, model.lognoisevariance] = stk_param_init (model, xi, zi, BOX); model.param = stk_param_estim (model, xi, zi, param0); zp = stk_predict (model, xi, zi, xt); assert (isequal (model.lognoisevariance, lnv)); % should be untouched assert (max ((zp.mean - zt) .^ 2) < 1e-3) ***** shared model, x, z model = stk_model ('stk_materncov52_iso'); n = 10; x = stk_sampling_regulargrid (n, 1, [0; 1]); z = ones (size (x)); ***** test % Constant response, noiseless model [param, lnv] = stk_param_init (model, x, z); assert ((all (isfinite (param))) && (length (param) == 2)); assert (isequal (lnv, -inf)); warning: Parameter estimation is impossible with constant-response data. ***** test % Constant response, noisy model model.lognoisevariance = nan; [param, lnv] = stk_param_init (model, x, z); assert ((all (isfinite (param))) && (length (param) == 2)); assert (isscalar (lnv) && isfinite (lnv)); warning: Parameter estimation is impossible with constant-response data. 15 tests, 15 passed, 0 known failure, 0 skipped [inst/param/estim/stk_param_estim.m] >>>>> /<>/inst/param/estim/stk_param_estim.m ***** shared f, xi, zi, NI, param0, param1, model f = @(x)(- (0.8 * x + sin (5 * x + 1) + 0.1 * sin (10 * x)) ); DIM = 1; NI = 20; box = [-1.0; 1.0]; xi = stk_sampling_regulargrid (NI, DIM, box); SIGMA2 = 1.0; % variance parameter NU = 4.0; % regularity parameter RHO1 = 0.4; % scale (range) parameter param0 = log ([SIGMA2; NU; 1/RHO1]); model = stk_model ('stk_materncov_iso'); ***** test % noiseless zi = stk_feval (f, xi); param1 = stk_param_estim (model, xi, zi, param0); assert (isequal (size (param1), size (param0))) ***** test % same thing, with empty lnv0 (ok) param2 = stk_param_estim (model, xi, zi, param0, []); assert (stk_isequal_tolrel (param2, param1, 1e-2)) ***** error % same thing, with lnv0 == NaN (not ok as a starting point) param2 = stk_param_estim (model, xi, zi, param0, nan); ***** error % same thing, with lnv0 == -inf (not ok as a starting point) param2 = stk_param_estim (model, xi, zi, param0, -inf); ***** test % same thing, with explicit value for 'criterion' param2 = stk_param_estim (model, xi, zi, param0, [], @stk_param_relik); assert (stk_isequal_tolrel (param1, param2, 1e-2)) ***** test % noiseless zi = stk_feval (f, xi); param1 = stk_param_estim (model, xi, zi, param0); param2 = stk_param_estim (model, xi, zi, param0, [], @stk_param_relik); % We cannot assume a DETERMINISTIC optimization algorithm % (for some reason, Octave's sqp is not exactly deterministic) assert (stk_isequal_tolrel (param1, param2, 1e-2)) ***** test % noisy NOISE_STD_TRUE = 0.1; NOISE_STD_INIT = 1e-5; zi = zi + NOISE_STD_TRUE * randn(NI, 1); model.lognoisevariance = 2 * log(NOISE_STD_INIT); [param, lnv] = stk_param_estim ... (model, xi, zi, param0, model.lognoisevariance); ***** error param = stk_param_estim () ***** error param = stk_param_estim (model); ***** error param = stk_param_estim (model, xi); ***** test % Constant response model = stk_model ('stk_materncov52_iso'); n = 10; x = stk_sampling_regulargrid (n, 1, [0; 1]); z = ones (size (x)); param = stk_param_estim (model, x, z); assert ((all (isfinite (param))) && (length (param) == 2)); warning: Constant-response data: the output of stk_param_estim is likely to be unreliable. warning: Parameter estimation is impossible with constant-response data. 11 tests, 11 passed, 0 known failure, 0 skipped [inst/param/estim/stk_param_init_lnv.m] >>>>> /<>/inst/param/estim/stk_param_init_lnv.m ***** test f = @(x)(- (0.8 * x + sin (5 * x + 1) + 0.1 * sin (10 * x))); ni = 20; xi = (linspace (-1, 1, ni))' + 0.2 * (randn (ni, 1)); zi = stk_feval (f, xi); model = stk_model ('stk_materncov_iso'); model.param = log ([1; 5/2; 1/0.4]); model.lognoisevariance = nan; lnv = stk_param_init_lnv (model, xi, zi); assert ((isscalar (lnv)) && (lnv > -30) && (lnv < 30)); 1 test, 1 passed, 0 known failure, 0 skipped [inst/param/estim/stk_param_gls.m] >>>>> /<>/inst/param/estim/stk_param_gls.m ***** shared xi, zi, model, beta, sigma2 xi = (1:10)'; zi = sin (xi); model = stk_model ('stk_materncov52_iso'); model.param = [0.0 0.0]; ***** test model.lm = stk_lm_constant (); [beta, sigma2] = stk_param_gls (model, xi, zi); ***** assert (stk_isequal_tolabs (beta, 0.1346064, 1e-6)) ***** assert (stk_isequal_tolabs (sigma2, 0.4295288, 1e-6)) ***** test model.lm = stk_lm_affine (); [beta, sigma2] = stk_param_gls (model, xi, zi); ***** assert (stk_isequal_tolabs (beta, [0.4728342; -0.0614960], 1e-6)) ***** assert (stk_isequal_tolabs (sigma2, 0.4559431, 1e-6)) ***** test model.lm = stk_lm_null (); [beta, sigma2] = stk_param_gls (model, xi, zi); ***** assert (isequal (beta, zeros (0, 1))) ***** assert (stk_isequal_tolabs (sigma2, 0.3977993, 1e-6)) 9 tests, 9 passed, 0 known failure, 0 skipped [inst/param/estim/stk_param_relik.m] >>>>> /<>/inst/param/estim/stk_param_relik.m ***** shared f, xi, zi, NI, model, C, dC1, dC2 f = @(x)(- (0.8 * x(:, 1) + sin (5 * x(:, 2) + 1) ... + 0.1 * sin (10 * x(:, 3)))); DIM = 3; NI = 20; box = repmat ([-1.0; 1.0], 1, DIM); xi = stk_sampling_halton_rr2 (NI, DIM, box); zi = stk_feval (f, xi); SIGMA2 = 1.0; % variance parameter NU = 4.0; % regularity parameter RHO1 = 0.4; % scale (range) parameter model = stk_model('stk_materncov_aniso'); model.param = log([SIGMA2; NU; 1/RHO1 * ones(DIM, 1)]); ***** error [C, dC1, dC2] = stk_param_relik (); ***** error [C, dC1, dC2] = stk_param_relik (model); ***** error [C, dC1, dC2] = stk_param_relik (model, xi); ***** test [C, dC1, dC2] = stk_param_relik (model, xi, zi); ***** test TOL_REL = 0.01; assert (stk_isequal_tolrel (C, 21.6, TOL_REL)); assert (stk_isequal_tolrel (dC1, [4.387 -0.1803 0.7917 0.1392 2.580]', TOL_REL)); assert (isequal (dC2, [])); ***** shared xi, zi, model, TOL_REL xi = [-1 -.6 -.2 .2 .6 1]'; zi = [-0.11 1.30 0.23 -1.14 0.36 -0.37]'; model = stk_model ('stk_materncov_iso'); model.param = log ([1.0 4.0 2.5]); model.lognoisevariance = log (0.01); TOL_REL = 0.01; ***** test % Another simple 1D check [C, dC1, dC2] = stk_param_relik (model, xi, zi); assert (stk_isequal_tolrel (C, 6.327, TOL_REL)); assert (stk_isequal_tolrel (dC1, [0.268 0.0149 -0.636]', TOL_REL)); assert (stk_isequal_tolrel (dC2, -1.581e-04, TOL_REL)); ***** test % Same 1D test with simple kriging model.lm = stk_lm_null; [C, dC1, dC2] = stk_param_relik (model, xi, zi); assert (stk_isequal_tolrel (C, 7.475, TOL_REL)); assert (stk_isequal_tolrel (dC1, [0.765 0.0238 -1.019]', TOL_REL)); assert (stk_isequal_tolrel (dC2, 3.0517e-03, TOL_REL)); ***** test % Check the gradient on a 2D test case f = @stk_testfun_braninhoo; DIM = 2; BOX = [[-5; 10], [0; 15]]; NI = 20; TOL_REL = 1e-2; DELTA = 1e-6; model = stk_model ('stk_materncov52_iso', DIM); xi = stk_sampling_halton_rr2 (NI, DIM, BOX); zi = stk_feval (f, xi); model.param = [1 1]; [C1 dC] = stk_param_relik (model, xi, zi); model.param = model.param + DELTA * [0 1]; C2 = stk_param_relik (model, xi, zi); assert (stk_isequal_tolrel (dC(2), (C2 - C1) / DELTA, TOL_REL)); 8 tests, 8 passed, 0 known failure, 0 skipped [inst/utils/stk_generate_samplepaths.m] >>>>> /<>/inst/utils/stk_generate_samplepaths.m ***** shared model, xi, zi, xt, n, nb_paths dim = 1; n = 50; nb_paths = 5; model = stk_model ('stk_materncov32_iso', dim); model.param = log ([1.0; 2.9]); xt = stk_sampling_regulargrid (n, dim, [-1.0; 1.0]); xi = [xt(1, :); xt(end, :)]; zi = [0; 0]; ***** error zsim = stk_generate_samplepaths (); ***** error zsim = stk_generate_samplepaths (model); ***** test zsim = stk_generate_samplepaths (model, xt); ***** test zsim = stk_generate_samplepaths (model, xt, nb_paths); ***** test zsim = stk_generate_samplepaths (model, xi, zi, xt); ***** test zsim = stk_generate_samplepaths (model, xi, zi, xt, nb_paths); ***** test zsim = stk_generate_samplepaths (model, xt); assert (isequal (size (zsim), [n, 1])); ***** test zsim = stk_generate_samplepaths (model, xt, nb_paths); assert (isequal (size (zsim), [n, nb_paths])); ***** test % duplicate simulation points zsim = stk_generate_samplepaths (model, [xt; xt], nb_paths); assert (isequal (size (zsim), [2 * n, nb_paths])); assert (isequal (zsim(1:n, :), zsim((n + 1):end, :))); ***** test % simulation points equal to observation points (noiseless model) % https://sourceforge.net/p/kriging/tickets/14/ zsim = stk_generate_samplepaths (model, xt, zeros (n, 1), xt); assert (isequal (zsim, zeros (n, 1))); 10 tests, 10 passed, 0 known failure, 0 skipped [inst/utils/stk_conditioning.m] >>>>> /<>/inst/utils/stk_conditioning.m ***** shared n, m, ni, xi_ind, lambda, zsim, zi n = 50; m = 5; ni = 10; xi_ind = 1:ni; lambda = 1/ni * ones (ni, n); % prediction == averaging zsim = ones (n, m); % const unconditioned samplepaths zi = zeros (ni, 1); % conditioning by zeros ***** error zsimc = stk_conditioning (); ***** error zsimc = stk_conditioning (lambda); ***** error zsimc = stk_conditioning (lambda, zi); ***** test zsimc = stk_conditioning (lambda, zi, zsim); ***** test zsimc = stk_conditioning (lambda, zi, zsim, xi_ind); ***** test zsimc = stk_conditioning (lambda, zi, zsim, xi_ind); assert (stk_isequal_tolabs (double (zsimc), zeros (n, m))); ***** test zi = 2 * ones (ni, 1); % conditioning by twos zsimc = stk_conditioning (lambda, zi, zsim, xi_ind); assert (stk_isequal_tolabs (double (zsimc), 2 * ones (n, m))); ***** test DIM = 1; nt = 400; xt = stk_sampling_regulargrid (nt, DIM, [-1.0; 1.0]); NI = 6; xi_ind = [1 20 90 200 300 350]; xi = xt(xi_ind, 1); zi = (1:NI)'; % linear response ;-) % Carry out the kriging prediction at points xt model = stk_model ('stk_materncov52_iso'); model.param = log ([1.0; 2.9]); [ignore_zp, lambda] = stk_predict (model, xi, [], xt); % Generate (unconditional) sample paths according to the model NB_PATHS = 10; zsim = stk_generate_samplepaths (model, xt, NB_PATHS); zsimc = stk_conditioning (lambda, zi, zsim, xi_ind); 8 tests, 8 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_constant/stk_lm_constant.m] >>>>> /<>/inst/lm/@stk_lm_constant/stk_lm_constant.m ***** test stk_test_class ('stk_lm_constant') 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_constant/feval.m] >>>>> /<>/inst/lm/@stk_lm_constant/feval.m ***** test n = 15; d = 4; x = stk_sampling_randunif (n, d); P = feval (stk_lm_constant (), x); assert (isequal (size (P), [n, 1])); 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/stk_lm_polynomial.m] >>>>> /<>/inst/lm/stk_lm_polynomial.m ***** error lm = stk_lm_polynomial (); ***** test lm = stk_lm_polynomial (-1); assert (isa (lm, 'stk_lm_null')); ***** test lm = stk_lm_polynomial (0); assert (isa (lm, 'stk_lm_constant')); ***** test lm = stk_lm_polynomial (1); assert (isa (lm, 'stk_lm_affine')); ***** test lm = stk_lm_polynomial (2); assert (isa (lm, 'stk_lm_quadratic')); ***** test lm = stk_lm_polynomial (3); assert (isa (lm, 'stk_lm_cubic')); 6 tests, 6 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_affine/feval.m] >>>>> /<>/inst/lm/@stk_lm_affine/feval.m ***** test n = 15; d = 4; x = stk_sampling_randunif (n, d); P = feval (stk_lm_affine (), x); assert (isequal (size (P), [n, d + 1])); 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_affine/stk_lm_affine.m] >>>>> /<>/inst/lm/@stk_lm_affine/stk_lm_affine.m ***** test stk_test_class ('stk_lm_affine') 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_null/stk_lm_null.m] >>>>> /<>/inst/lm/@stk_lm_null/stk_lm_null.m ***** test stk_test_class ('stk_lm_null') 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_null/feval.m] >>>>> /<>/inst/lm/@stk_lm_null/feval.m ***** test n = 15; d = 4; x = stk_sampling_randunif (n, d); P = feval (stk_lm_null (), x); assert (isequal (size (P), [n, 0])); 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_matrix/stk_lm_matrix.m] >>>>> /<>/inst/lm/@stk_lm_matrix/stk_lm_matrix.m ***** test stk_test_class ('stk_lm_matrix') ***** test %%% dim 1 data = rand (10, 1); idx = 3:7; lm = stk_lm_matrix (data); assert (isa (lm, 'stk_lm_matrix')); assert (isequal (data(idx, :), feval (lm, idx))); ***** test %%% dim 3 data = rand (10, 3); idx = 3:7; lm = stk_lm_matrix (data); assert (isa (lm, 'stk_lm_matrix')); assert (isequal (data(idx, :), feval (lm, idx))); 3 tests, 3 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_cubic/feval.m] >>>>> /<>/inst/lm/@stk_lm_cubic/feval.m ***** test n = 15; d = 4; x = stk_sampling_randunif (n, d); P = feval (stk_lm_cubic (), x); assert (isequal (size (P), [n, 1 + d * (11 + d * (6 + d)) / 6])) 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_cubic/stk_lm_cubic.m] >>>>> /<>/inst/lm/@stk_lm_cubic/stk_lm_cubic.m ***** test stk_test_class ('stk_lm_cubic') 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_quadratic/stk_lm_quadratic.m] >>>>> /<>/inst/lm/@stk_lm_quadratic/stk_lm_quadratic.m ***** test stk_test_class ('stk_lm_quadratic') 1 test, 1 passed, 0 known failure, 0 skipped [inst/lm/@stk_lm_quadratic/feval.m] >>>>> /<>/inst/lm/@stk_lm_quadratic/feval.m ***** test n = 15; d = 4; x = stk_sampling_randunif (n, d); P = feval (stk_lm_quadratic (), x); assert (isequal (size (P), [n, 1 + d * (d + 3) / 2])); 1 test, 1 passed, 0 known failure, 0 skipped Checking C++ files ... Summary: 1549 tests, 1549 passed, 0 known failures, 0 skipped dh_installdocs -a -O--buildsystem=octave dh_installchangelogs -a -O--buildsystem=octave dh_octave_changelogs -a -O--buildsystem=octave dh_octave_examples -a -O--buildsystem=octave dh_installsystemduser -a -O--buildsystem=octave dh_lintian -a -O--buildsystem=octave dh_perl -a -O--buildsystem=octave dh_link -a -O--buildsystem=octave dh_strip_nondeterminism -a -O--buildsystem=octave dh_compress -a -O--buildsystem=octave dh_fixperms -a -O--buildsystem=octave dh_missing -a -O--buildsystem=octave dh_dwz -a -a -O--buildsystem=octave dh_strip -a -a -O--buildsystem=octave dh_makeshlibs -a -a -O--buildsystem=octave dh_shlibdeps -a -a -O--buildsystem=octave dh_octave_substvar -a -O--buildsystem=octave dh_installdeb -a -O--buildsystem=octave dh_gencontrol -a -O--buildsystem=octave dpkg-gencontrol: warning: package octave-stk: substitution variable ${octave:Upstream-Description} unused, but is defined dh_md5sums -a -O--buildsystem=octave dh_builddeb -a -O--buildsystem=octave INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 pkgstriptranslations: processing octave-stk-dbgsym (in debian/.debhelper/octave-stk/dbgsym-root); do_strip: , oemstrip: pkgstriptranslations: processing octave-stk (in debian/octave-stk); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/octave-stk/dbgsym-root/DEBIAN/control, package octave-stk-dbgsym, directory debian/.debhelper/octave-stk/dbgsym-root dpkg-deb: building package 'octave-stk-dbgsym' in 'debian/.debhelper/scratch-space/build-octave-stk/octave-stk-dbgsym_2.6.1-3_ppc64el.deb'. pkgstripfiles: processing control file: debian/octave-stk/DEBIAN/control, package octave-stk, directory debian/octave-stk pkgstripfiles: Truncating usr/share/doc/octave-stk/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package octave-stk ... pkgstripfiles: No PNG files. dpkg-deb: building package 'octave-stk' in '../octave-stk_2.6.1-3_ppc64el.deb'. Renaming octave-stk-dbgsym_2.6.1-3_ppc64el.deb to octave-stk-dbgsym_2.6.1-3_ppc64el.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../octave-stk_2.6.1-3_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20200803-1718 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ octave-stk_2.6.1-3_ppc64el.changes: ----------------------------------- Format: 1.8 Date: Sun, 02 Aug 2020 13:07:37 -0300 Source: octave-stk Binary: octave-stk Architecture: ppc64el Version: 2.6.1-3 Distribution: groovy-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Rafael Laboissière Description: octave-stk - (not so) Small Toolbox for Kriging Changes: octave-stk (2.6.1-3) unstable; urgency=medium . * Team upload . * d/control: + Bump Standards-Version to 4.5.0 (no changes needed) + Bump debhelper compatibility level to 13 * d/u/metadata: + Add Bug-{Database,Submit} and Repository-Browse fields + Drop Name and Contact fields * d/p/0003-Mark-expected-failure.patch: Set Forwarded:not-needed * d/octave-stk.lintian-overrides: Rename tag shared-library-lacks-prerequisites Checksums-Sha1: 200fba4df85e473503b565e2d4a5f45d0709efbd 82040 octave-stk-dbgsym_2.6.1-3_ppc64el.ddeb 96d80ba50d99b4cd5fb3245b6e84cafcf96dbf69 19241 octave-stk_2.6.1-3_ppc64el.buildinfo d553bcded9ff8654170358a12dcd6c20ee6c0d05 315032 octave-stk_2.6.1-3_ppc64el.deb Checksums-Sha256: 27f2eba9b166279725c65ea2c28cd476339a647bab0c9191d9775249aaee9c62 82040 octave-stk-dbgsym_2.6.1-3_ppc64el.ddeb 1dfb9ce0103b24198d2a74f32fbb8b10efaeb0f6ccbfa58060c256ba2ddecae5 19241 octave-stk_2.6.1-3_ppc64el.buildinfo 55c5533776327b596e8b6ca55250decfced740e6a5ac42b518d96332982a4c59 315032 octave-stk_2.6.1-3_ppc64el.deb Files: 450597ebcf67e22c78b0ad6ffba313a0 82040 debug optional octave-stk-dbgsym_2.6.1-3_ppc64el.ddeb cd4389c2be3479ab785e78d8687a0d81 19241 math optional octave-stk_2.6.1-3_ppc64el.buildinfo 053b70549fb8a21a12d5b8e8d334e435 315032 math optional octave-stk_2.6.1-3_ppc64el.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ octave-stk_2.6.1-3_ppc64el.deb ------------------------------ new debian package, version 2.0. size 315032 bytes: control archive=13648 bytes. 1114 bytes, 22 lines control 54321 bytes, 510 lines md5sums Package: octave-stk Version: 2.6.1-3 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Octave Group Installed-Size: 2966 Depends: octave (>= 5.2.0), libc6 (>= 2.29), octave-abi-53 Section: math Priority: optional Homepage: https://octave.sourceforge.io/stk/ Description: (not so) Small Toolbox for Kriging The STK is a (not so) Small Toolbox for Kriging. Its primary focus is on the interpolation/regression technique known as kriging, which is very closely related to Splines and Radial Basis Functions, and can be interpreted as a non-parametric Bayesian method using a Gaussian Process (GP) prior. The STK also provides tools for the sequential and non-sequential design of experiments. Even though it is, currently, mostly geared towards the Design and Analysis of Computer Experiments (DACE), the STK can be useful for other applications areas (such as Geostatistics, Machine Learning, Non-parametric Regression, etc.). . This Octave add-on package is part of the Octave-Forge project. drwxr-xr-x root/root 0 2020-08-02 16:07 ./ drwxr-xr-x root/root 0 2020-08-02 16:07 ./usr/ drwxr-xr-x root/root 0 2020-08-02 16:07 ./usr/lib/ drwxr-xr-x root/root 0 2020-08-02 16:07 ./usr/lib/powerpc64le-linux-gnu/ drwxr-xr-x root/root 0 2020-08-02 16:07 ./usr/lib/powerpc64le-linux-gnu/octave/ drwxr-xr-x root/root 0 2020-08-02 16:07 ./usr/lib/powerpc64le-linux-gnu/octave/packages/ drwxr-xr-x root/root 0 2020-08-02 16:07 ./usr/lib/powerpc64le-linux-gnu/octave/packages/stk-2.6.1/ drwxr-xr-x root/root 0 2020-08-02 16:07 ./usr/lib/powerpc64le-linux-gnu/octave/packages/stk-2.6.1/powerpc64le-unknown-linux-gnu-api-v53/ -rw-r--r-- root/root 67808 2020-08-02 16:07 ./usr/lib/powerpc64le-linux-gnu/octave/packages/stk-2.6.1/powerpc64le-unknown-linux-gnu-api-v53/__get_column_number__.mex -rw-r--r-- root/root 67760 2020-08-02 16:07 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Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: ppc64el Build-Space: 8892 Build-Time: 265 Distribution: groovy-proposed Host Architecture: ppc64el Install-Time: 40 Job: octave-stk_2.6.1-3.dsc Machine Architecture: ppc64el Package: octave-stk Package-Time: 306 Source-Version: 2.6.1-3 Space: 8892 Status: successful Version: 2.6.1-3 -------------------------------------------------------------------------------- Finished at 20200803-1718 Build needed 00:05:06, 8892k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=groovy --arch=ppc64el PACKAGEBUILD-19765811 Scanning for processes to kill in build PACKAGEBUILD-19765811