https://launchpad.net/ubuntu/+source/openbabel/3.0.0+dfsg-2/+build/18599927 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-038 4.4.0-171-generic #200-Ubuntu SMP Tue Dec 3 11:07:23 UTC 2019 aarch64 Buildd toolchain package versions: launchpad-buildd_183 python-lpbuildd_183 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 22 Jan 23:12:14 ntpdate[1917]: adjust time server 10.211.37.1 offset -0.003220 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-18599927 --image-type chroot /home/buildd/filecache-default/9d93b4075e16ce7cfbdf01f21507152b0a173b17 Creating target for build PACKAGEBUILD-18599927 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-18599927 Starting target for build PACKAGEBUILD-18599927 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-18599927 'deb http://ftpmaster.internal/ubuntu focal main universe' 'deb http://ftpmaster.internal/ubuntu focal-security main universe' 'deb http://ftpmaster.internal/ubuntu focal-updates main universe' 'deb http://ftpmaster.internal/ubuntu focal-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-18599927 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-18599927 Updating target for build PACKAGEBUILD-18599927 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu focal-security InRelease [79.7 kB] Get:3 http://ftpmaster.internal/ubuntu focal-updates InRelease [79.7 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed InRelease [255 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main arm64 Packages [937 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main Translation-en [500 kB] Get:7 http://ftpmaster.internal/ubuntu focal/universe arm64 Packages [8398 kB] Get:8 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5139 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 Packages [119 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main Translation-en [56.8 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 Packages [459 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/universe Translation-en [239 kB] Fetched 16.5 MB in 6s (2561 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libffi6 libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libctf-nobfd0 libctf0 libffi7 libhogweed5 libisl22 libnettle7 libperl5.30 perl-modules-5.30 The following packages will be upgraded: apt base-files base-passwd bash binutils binutils-aarch64-linux-gnu binutils-common bsdutils bzip2 cpp-9 debianutils fdisk g++-9 gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv gzip hostname libacl1 libapparmor1 libapt-pkg5.90 libasan5 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcryptsetup12 libdebconfclient0 libdevmapper1.02.1 libfdisk1 libgcc-9-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libitm1 libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblsan0 liblz4-1 libmount1 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libsqlite3-0 libssl1.1 libstdc++-9-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libtsan0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev login lsb-base mount ncurses-base ncurses-bin openssl passwd perl perl-base sensible-utils systemd systemd-sysv sysvinit-utils util-linux 97 upgraded, 8 newly installed, 0 to remove and 0 not upgraded. Need to get 57.5 MB of archives. After this operation, 40.0 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main arm64 libc6-dev arm64 2.30-0ubuntu3 [2091 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main arm64 libc-dev-bin arm64 2.30-0ubuntu3 [64.1 kB] Get:3 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 linux-libc-dev arm64 5.4.0-12.15 [1084 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main arm64 libisl22 arm64 0.22-2 [536 kB] Get:5 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libcc1-0 arm64 9.2.1-24ubuntu1 [37.1 kB] Get:6 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libctf-nobfd0 arm64 2.33.90.20200122-1ubuntu2 [43.4 kB] Get:7 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libctf0 arm64 2.33.90.20200122-1ubuntu2 [43.0 kB] Get:8 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 binutils-aarch64-linux-gnu arm64 2.33.90.20200122-1ubuntu2 [1988 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libbinutils arm64 2.33.90.20200122-1ubuntu2 [473 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 binutils-common arm64 2.33.90.20200122-1ubuntu2 [206 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 binutils arm64 2.33.90.20200122-1ubuntu2 [3356 B] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 gcc-9-base arm64 9.2.1-24ubuntu1 [19.0 kB] Get:13 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libgcc1 arm64 1:9.2.1-24ubuntu1 [34.3 kB] Get:14 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libgomp1 arm64 9.2.1-24ubuntu1 [80.6 kB] Get:15 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libitm1 arm64 9.2.1-24ubuntu1 [25.0 kB] Get:16 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libatomic1 arm64 9.2.1-24ubuntu1 [9172 B] Get:17 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libasan5 arm64 9.2.1-24ubuntu1 [365 kB] Get:18 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 liblsan0 arm64 9.2.1-24ubuntu1 [126 kB] Get:19 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libtsan0 arm64 9.2.1-24ubuntu1 [284 kB] Get:20 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libubsan1 arm64 9.2.1-24ubuntu1 [121 kB] Get:21 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 g++-9 arm64 9.2.1-24ubuntu1 [6808 kB] Get:22 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libstdc++-9-dev arm64 9.2.1-24ubuntu1 [1674 kB] Get:23 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libgcc-9-dev arm64 9.2.1-24ubuntu1 [905 kB] Get:24 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 gcc-9 arm64 9.2.1-24ubuntu1 [6673 kB] Get:25 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 cpp-9 arm64 9.2.1-24ubuntu1 [5960 kB] Get:26 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libstdc++6 arm64 9.2.1-24ubuntu1 [466 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main arm64 libc6 arm64 2.30-0ubuntu3 [2273 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main arm64 base-files arm64 11ubuntu2 [60.0 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main arm64 debianutils arm64 4.9.1 [85.6 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main arm64 bash arm64 5.0-5ubuntu1 [603 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main arm64 bsdutils arm64 1:2.34-0.1ubuntu5 [60.7 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main arm64 gzip arm64 1.10-0ubuntu4 [93.0 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main arm64 hostname arm64 3.23 [11.1 kB] Get:34 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 login arm64 1:4.8-1ubuntu1 [218 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main arm64 ncurses-bin arm64 6.1+20191019-1ubuntu1 [166 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main arm64 perl-modules-5.30 all 5.30.0-9 [2739 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main arm64 libperl5.30 arm64 5.30.0-9 [3764 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main arm64 perl arm64 5.30.0-9 [224 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main arm64 perl-base arm64 5.30.0-9 [1389 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main arm64 bzip2 arm64 1.0.8-2 [33.0 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main arm64 libbz2-1.0 arm64 1.0.8-2 [32.9 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main arm64 libblkid1 arm64 2.34-0.1ubuntu5 [129 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main arm64 libuuid1 arm64 2.34-0.1ubuntu5 [19.9 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main arm64 libfdisk1 arm64 2.34-0.1ubuntu5 [160 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main arm64 libpcre2-8-0 arm64 10.34-7 [170 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main arm64 libselinux1 arm64 3.0-1 [64.8 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main arm64 libmount1 arm64 2.34-0.1ubuntu5 [140 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main arm64 libncurses6 arm64 6.1+20191019-1ubuntu1 [91.8 kB] Get:49 http://ftpmaster.internal/ubuntu focal/main arm64 libtinfo6 arm64 6.1+20191019-1ubuntu1 [80.4 kB] Get:50 http://ftpmaster.internal/ubuntu focal/main arm64 libncursesw6 arm64 6.1+20191019-1ubuntu1 [120 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main arm64 libsmartcols1 arm64 2.34-0.1ubuntu5 [93.4 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main arm64 fdisk arm64 2.34-0.1ubuntu5 [114 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main arm64 util-linux arm64 2.34-0.1ubuntu5 [982 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main arm64 libdebconfclient0 arm64 0.250ubuntu2 [6260 B] Get:55 http://ftpmaster.internal/ubuntu focal/main arm64 base-passwd arm64 3.5.47 [47.0 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main arm64 libc-bin arm64 2.30-0ubuntu3 [502 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main arm64 ncurses-base all 6.1+20191019-1ubuntu1 [17.9 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main arm64 lsb-base all 11.1.0ubuntu2 [12.1 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main arm64 sysvinit-utils arm64 2.96-1ubuntu1 [20.5 kB] Get:60 http://ftpmaster.internal/ubuntu focal/main arm64 libgcrypt20 arm64 1.8.5-3ubuntu1 [350 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main arm64 liblz4-1 arm64 1.9.2-2 [52.7 kB] Get:62 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 systemd-sysv arm64 244.1-0ubuntu2 [9364 B] Get:63 http://ftpmaster.internal/ubuntu focal/main arm64 libacl1 arm64 2.2.53-5ubuntu1 [17.7 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main arm64 libapparmor1 arm64 2.13.3-7ubuntu1 [33.2 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main arm64 libaudit-common all 1:2.8.5-2ubuntu5 [4076 B] Get:66 http://ftpmaster.internal/ubuntu focal/main arm64 libcap-ng0 arm64 0.7.9-2.1 [10.5 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main arm64 libaudit1 arm64 1:2.8.5-2ubuntu5 [38.4 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main arm64 libcap2 arm64 1:2.27-1 [13.9 kB] Get:69 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libudev1 arm64 244.1-0ubuntu2 [70.5 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main arm64 libdevmapper1.02.1 arm64 2:1.02.155-2ubuntu7 [111 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main arm64 libjson-c4 arm64 0.13.1+dfsg-6 [28.0 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main arm64 libssl1.1 arm64 1.1.1d-2ubuntu3 [1153 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main arm64 libcryptsetup12 arm64 2:2.2.2-1ubuntu1 [166 kB] Get:74 http://ftpmaster.internal/ubuntu focal/main arm64 libnettle7 arm64 3.5.1+really3.5.1-2 [124 kB] Get:75 http://ftpmaster.internal/ubuntu focal/main arm64 libhogweed5 arm64 3.5.1+really3.5.1-2 [134 kB] Get:76 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libffi7 arm64 3.3-3 [17.1 kB] Get:77 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libp11-kit0 arm64 0.23.18.1-2build1 [176 kB] Get:78 http://ftpmaster.internal/ubuntu focal/main arm64 libtasn1-6 arm64 4.15.0-2 [36.3 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main arm64 libgnutls30 arm64 3.6.11.1-2ubuntu2 [720 kB] Get:80 http://ftpmaster.internal/ubuntu focal/main arm64 libkmod2 arm64 26-3ubuntu1 [39.5 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main arm64 libpam0g arm64 1.3.1-5ubuntu4 [53.9 kB] Get:82 http://ftpmaster.internal/ubuntu focal/main arm64 libseccomp2 arm64 2.4.2-2ubuntu2 [39.8 kB] Get:83 http://ftpmaster.internal/ubuntu focal/main arm64 mount arm64 2.34-0.1ubuntu5 [112 kB] Get:84 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 systemd arm64 244.1-0ubuntu2 [3384 kB] Get:85 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libsystemd0 arm64 244.1-0ubuntu2 [240 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main arm64 libzstd1 arm64 1.4.4+dfsg-1 [216 kB] Get:87 http://ftpmaster.internal/ubuntu focal/main arm64 libapt-pkg5.90 arm64 1.9.7 [776 kB] Get:88 http://ftpmaster.internal/ubuntu focal/main arm64 gpgv arm64 2.2.17-3ubuntu1 [183 kB] Get:89 http://ftpmaster.internal/ubuntu focal/main arm64 apt arm64 1.9.7 [1229 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main arm64 libpam-modules-bin arm64 1.3.1-5ubuntu4 [35.8 kB] Get:91 http://ftpmaster.internal/ubuntu focal/main arm64 libpam-modules arm64 1.3.1-5ubuntu4 [242 kB] Get:92 http://ftpmaster.internal/ubuntu focal/main arm64 libattr1 arm64 1:2.4.48-5 [12.5 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main arm64 libpam-runtime all 1.3.1-5ubuntu4 [37.3 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main arm64 libsepol1 arm64 3.0-1 [231 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main arm64 libsemanage-common all 3.0-1 [9880 B] Get:96 http://ftpmaster.internal/ubuntu focal/main arm64 libsemanage1 arm64 3.0-1 [79.6 kB] Get:97 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 passwd arm64 1:4.8-1ubuntu1 [771 kB] Get:98 http://ftpmaster.internal/ubuntu focal/main arm64 sensible-utils all 0.0.12+nmu1 [15.0 kB] Get:99 http://ftpmaster.internal/ubuntu focal/main arm64 libsqlite3-0 arm64 3.30.1-1ubuntu1 [499 kB] Get:100 http://ftpmaster.internal/ubuntu focal/main arm64 openssl arm64 1.1.1d-2ubuntu3 [597 kB] Get:101 http://ftpmaster.internal/ubuntu focal/main arm64 gpg arm64 2.2.17-3ubuntu1 [437 kB] Get:102 http://ftpmaster.internal/ubuntu focal/main arm64 gpgconf arm64 2.2.17-3ubuntu1 [117 kB] Get:103 http://ftpmaster.internal/ubuntu focal/main arm64 gpg-agent arm64 2.2.17-3ubuntu1 [216 kB] Get:104 http://ftpmaster.internal/ubuntu focal/main arm64 liblockfile-bin arm64 1.16-1.1 [11.3 kB] Get:105 http://ftpmaster.internal/ubuntu focal/main arm64 liblockfile1 arm64 1.16-1.1 [6440 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 57.5 MB in 2s (27.7 MB/s) (Reading database ... 12731 files and directories currently installed.) 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Setting up gpg-agent (2.2.17-3ubuntu1) ... Installing new version of config file /etc/logcheck/ignore.d.server/gpg-agent ... Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket -> /usr/lib/systemd/user/gpg-agent-browser.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket -> /usr/lib/systemd/user/gpg-agent-extra.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket -> /usr/lib/systemd/user/gpg-agent-ssh.socket. Created symlink /etc/systemd/user/sockets.target.wants/gpg-agent.socket -> /usr/lib/systemd/user/gpg-agent.socket. Setting up binutils-aarch64-linux-gnu (2.33.90.20200122-1ubuntu2) ... Setting up binutils (2.33.90.20200122-1ubuntu2) ... Setting up libgcc-9-dev:arm64 (9.2.1-24ubuntu1) ... Setting up perl (5.30.0-9) ... Setting up cpp-9 (9.2.1-24ubuntu1) ... Setting up libc6-dev:arm64 (2.30-0ubuntu3) ... Setting up libcryptsetup12:arm64 (2:2.2.2-1ubuntu1) ... Setting up gcc-9 (9.2.1-24ubuntu1) ... Setting up libstdc++-9-dev:arm64 (9.2.1-24ubuntu1) ... Setting up systemd (244.1-0ubuntu2) ... Installing new version of config file /etc/dhcp/dhclient-enter-hooks.d/resolved ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from KVM UUID. Setting up g++-9 (9.2.1-24ubuntu1) ... Setting up systemd-sysv (244.1-0ubuntu2) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-18599927 arm64 focal-proposed -c chroot:build-PACKAGEBUILD-18599927 --arch=arm64 --dist=focal-proposed --nolog openbabel_3.0.0+dfsg-2.dsc Initiating build PACKAGEBUILD-18599927 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-171-generic #200-Ubuntu SMP Tue Dec 3 11:07:23 UTC 2019 aarch64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-038.buildd +==============================================================================+ | openbabel 3.0.0+dfsg-2 (arm64) 22 Jan 2020 23:13 | +==============================================================================+ Package: openbabel Version: 3.0.0+dfsg-2 Source Version: 3.0.0+dfsg-2 Distribution: focal-proposed Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 I: NOTICE: Log filtering will replace 'build/openbabel-xeLJVK/openbabel-3.0.0+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/openbabel-xeLJVK' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-18599927/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- openbabel_3.0.0+dfsg-2.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-1KKOcj/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-1KKOcj/apt_archive ./ InRelease Get:2 copy:/<>/resolver-1KKOcj/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-1KKOcj/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-1KKOcj/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-1KKOcj/apt_archive ./ Packages [523 B] Fetched 2856 B in 0s (60.5 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libffi6 libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-1KKOcj/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (62.4 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14657 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: cmake, debhelper (>= 12), dh-python, doxygen, ghostscript, graphviz, libboost-all-dev, libcairo2-dev, libeigen3-dev, libschroedinger-maeparser-dev (>= 1.2.2), libperl-dev, libwxgtk3.0-gtk3-dev, libxml2-dev, pkg-config, python3-dev, python3-setuptools, rapidjson-dev, swig, texlive-binaries, texlive-latex-base, zlib1g-dev Filtered Build-Depends: cmake, debhelper (>= 12), dh-python, doxygen, ghostscript, graphviz, libboost-all-dev, libcairo2-dev, libeigen3-dev, libschroedinger-maeparser-dev (>= 1.2.2), libperl-dev, libwxgtk3.0-gtk3-dev, libxml2-dev, pkg-config, python3-dev, python3-setuptools, rapidjson-dev, swig, texlive-binaries, texlive-latex-base, zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-openbabel-dummy' in '/<>/resolver-LiRfMx/apt_archive/sbuild-build-depends-openbabel-dummy.deb'. Ign:1 copy:/<>/resolver-LiRfMx/apt_archive ./ InRelease Get:2 copy:/<>/resolver-LiRfMx/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-LiRfMx/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-LiRfMx/apt_archive ./ Sources [365 B] Get:5 copy:/<>/resolver-LiRfMx/apt_archive ./ Packages [691 B] Fetched 3175 B in 0s (91.9 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install openbabel build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libffi6 libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: adwaita-icon-theme autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data cpp-8 dbus dbus-user-session dconf-gsettings-backend dconf-service debhelper dh-autoreconf dh-python dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gcc-8 gcc-8-base gettext gettext-base gfortran-8 ghostscript glib-networking glib-networking-common glib-networking-services graphviz groff-base gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme ibverbs-providers icu-devtools intltool-debian libann0 libarchive-zip-perl libarchive13 libasn1-8-heimdal libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libblkid-dev libboost-all-dev libboost-atomic-dev libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono-dev libboost-chrono1.67-dev libboost-chrono1.67.0 libboost-container-dev libboost-container1.67-dev libboost-container1.67.0 libboost-context-dev libboost-context1.67-dev libboost-context1.67.0 libboost-coroutine-dev libboost-coroutine1.67-dev libboost-coroutine1.67.0 libboost-date-time-dev libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev libboost-exception-dev libboost-exception1.67-dev libboost-fiber-dev libboost-fiber1.67-dev libboost-fiber1.67.0 libboost-filesystem-dev libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-graph-dev libboost-graph-parallel-dev libboost-graph-parallel1.67-dev libboost-graph-parallel1.67.0 libboost-graph1.67-dev libboost-graph1.67.0 libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-locale-dev libboost-locale1.67-dev libboost-locale1.67.0 libboost-log-dev libboost-log1.67-dev libboost-log1.67.0 libboost-math-dev libboost-math1.67-dev libboost-math1.67.0 libboost-mpi-dev libboost-mpi-python-dev libboost-mpi-python1.67-dev libboost-mpi-python1.67.0 libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-numpy-dev libboost-numpy1.67-dev libboost-numpy1.67.0 libboost-program-options-dev libboost-program-options1.67-dev libboost-program-options1.67.0 libboost-python-dev libboost-python1.67-dev libboost-python1.67.0 libboost-random-dev libboost-random1.67-dev libboost-random1.67.0 libboost-regex-dev libboost-regex1.67-dev libboost-regex1.67.0 libboost-serialization-dev libboost-serialization1.67-dev libboost-serialization1.67.0 libboost-signals-dev libboost-signals1.67-dev libboost-signals1.67.0 libboost-stacktrace-dev libboost-stacktrace1.67-dev libboost-stacktrace1.67.0 libboost-system-dev libboost-system1.67-dev libboost-system1.67.0 libboost-test-dev libboost-test1.67-dev libboost-test1.67.0 libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0 libboost-timer-dev libboost-timer1.67-dev libboost-timer1.67.0 libboost-tools-dev libboost-type-erasure-dev libboost-type-erasure1.67-dev libboost-type-erasure1.67.0 libboost-wave-dev libboost-wave1.67-dev libboost-wave1.67.0 libboost1.67-dev libboost1.67-tools-dev libbrotli1 libbsd0 libcairo-gobject2 libcairo-script-interpreter2 libcairo2 libcairo2-dev libcdt5 libcgraph6 libclang1-9 libcolord2 libcroco3 libcups2 libcurl4 libdatrie1 libdbus-1-3 libdconf1 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libeigen3-dev libelf1 libepoxy0 libevent-2.1-7 libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libexpat1 libexpat1-dev libffi-dev libfile-stripnondeterminism-perl libfontconfig1 libfontconfig1-dev libfreetype-dev libfreetype6 libfreetype6-dev libfribidi0 libgcc-8-dev libgd3 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran-8-dev libgfortran5 libgl-dev libgl1 libgl1-mesa-dev libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libgssapi3-heimdal libgtk-3-0 libgtk-3-common libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz-icu0 libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhwloc-dev libhwloc-plugins libhwloc15 libhx509-5-heimdal libibverbs-dev libibverbs1 libice-dev libice6 libicu-dev libicu63 libidn11 libijs-0.35 libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libjson-glib-1.0-0 libjson-glib-1.0-common libjsoncpp1 libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblab-gamut1 liblcms2-2 libldap-2.4-2 libldap-common libllvm9 libltdl-dev libltdl7 liblzo2-2 libmagic-mgc libmagic1 libmount-dev libmpdec2 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnotify4 libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4 libpciaccess0 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libperl-dev libpipeline1 libpixman-1-0 libpixman-1-dev libpmix2 libpng-dev libproxy1v5 libpsl5 libptexenc1 libpthread-stubs0-dev libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librest-0.7-0 librhash0 libroken18-heimdal librsvg2-2 librsvg2-common librtmp1 libsasl2-2 libsasl2-modules-db libschroedinger-maeparser-dev libschroedinger-maeparser1 libselinux1-dev libsensors-config libsensors5 libsepol1-dev libsigsegv2 libsm-dev libsm6 libsoup-gnome2.4-1 libsoup2.4-1 libssh-4 libsub-override-perl libsynctex2 libteckit0 libtexlua53 libthai-data libthai0 libtiff5 libtool libuchardet0 libuv1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwind0-heimdal libwxbase3.0-0v5 libwxbase3.0-dev libwxgtk3.0-gtk3-0v5 libwxgtk3.0-gtk3-dev libx11-6 libx11-data libx11-dev libx11-xcb1 libxapian30 libxau-dev libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-render0-dev libxcb-shm0 libxcb-shm0-dev libxcb-sync1 libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml2 libxml2-dev libxmu6 libxnvctrl0 libxpm4 libxrandr2 libxrender-dev libxrender1 libxshmfence1 libxt6 libxxf86vm1 libzzip-0-13 m4 man-db mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client pkg-config po-debconf poppler-data python2 python2-dev python2-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-dev python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3-setuptools python3.7 python3.7-dev python3.7-minimal rapidjson-dev shared-mime-info swig swig3.0 t1utils tex-common texlive-base texlive-binaries texlive-latex-base ubuntu-mono ucf uuid-dev wx-common wx3.0-headers x11-common x11proto-core-dev x11proto-dev x11proto-xext-dev xdg-utils xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build gcc-8-locales dh-make doxygen-latex doxygen-doc doxygen-gui gcc-8-doc gettext-doc libasprintf-dev libgettextpo-dev gfortran-8-doc libcoarrays-dev ghostscript-x gsfonts graphviz-doc groff lrzip libboost-doc python libboost1.67-doc gccxml libboost-contract1.67-dev libmpfrc++-dev libntl-dev xsltproc docbook-xml docbook-xsl default-jdk fop libcairo2-doc colord cups-common libeigen3-doc freetype2-doc libgd-tools libgirepository1.0-dev libglib2.0-doc libgdk-pixbuf2.0-bin | libgdk-pixbuf2.0-dev libxml2-utils krb5-doc krb5-user gvfs libice-doc icu-doc liblcms2-utils libtool-doc openmpi-doc pciutils librsvg2-bin lm-sensors libsm-doc gcj-jdk wx3.0-doc libx11-doc xapian-tools libxcb-doc libxext-doc m4-doc apparmor less www-browser opencl-icd gfortran | fortran-compiler keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum python2-doc python-tk python2.7-doc binfmt-support python3-doc python3-tk python3-venv python-setuptools-doc python3.7-venv python3.7-doc swig-doc swig-examples swig3.0-examples swig3.0-doc perl-tk xpdf | pdf-viewer xzdec texlive-latex-base-doc Recommended packages: curl | wget | lynx gsfonts fonts-liberation at-spi2-core libarchive-cpio-perl libgdk-pixbuf2.0-bin xdg-user-dirs fonts-droid-fallback libgtk-3-bin libgts-bin krb5-locales gnome-shell | notification-daemon libcoarrays-openmpi-dev libpng-tools publicsuffix libsasl2-modules xauth libmail-sendmail-perl lmodern dvisvgm zip libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: adwaita-icon-theme autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data cpp-8 dbus dbus-user-session dconf-gsettings-backend dconf-service debhelper dh-autoreconf dh-python dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gcc-8 gcc-8-base gettext gettext-base gfortran-8 ghostscript glib-networking glib-networking-common glib-networking-services graphviz groff-base gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme ibverbs-providers icu-devtools intltool-debian libann0 libarchive-zip-perl libarchive13 libasn1-8-heimdal libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libblkid-dev libboost-all-dev libboost-atomic-dev libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono-dev libboost-chrono1.67-dev libboost-chrono1.67.0 libboost-container-dev libboost-container1.67-dev libboost-container1.67.0 libboost-context-dev libboost-context1.67-dev libboost-context1.67.0 libboost-coroutine-dev libboost-coroutine1.67-dev libboost-coroutine1.67.0 libboost-date-time-dev libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev libboost-exception-dev libboost-exception1.67-dev libboost-fiber-dev libboost-fiber1.67-dev libboost-fiber1.67.0 libboost-filesystem-dev libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-graph-dev libboost-graph-parallel-dev libboost-graph-parallel1.67-dev libboost-graph-parallel1.67.0 libboost-graph1.67-dev libboost-graph1.67.0 libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-locale-dev libboost-locale1.67-dev libboost-locale1.67.0 libboost-log-dev libboost-log1.67-dev libboost-log1.67.0 libboost-math-dev libboost-math1.67-dev libboost-math1.67.0 libboost-mpi-dev libboost-mpi-python-dev libboost-mpi-python1.67-dev libboost-mpi-python1.67.0 libboost-mpi1.67-dev libboost-mpi1.67.0 libboost-numpy-dev libboost-numpy1.67-dev libboost-numpy1.67.0 libboost-program-options-dev libboost-program-options1.67-dev libboost-program-options1.67.0 libboost-python-dev libboost-python1.67-dev libboost-python1.67.0 libboost-random-dev libboost-random1.67-dev libboost-random1.67.0 libboost-regex-dev libboost-regex1.67-dev libboost-regex1.67.0 libboost-serialization-dev libboost-serialization1.67-dev libboost-serialization1.67.0 libboost-signals-dev libboost-signals1.67-dev libboost-signals1.67.0 libboost-stacktrace-dev libboost-stacktrace1.67-dev libboost-stacktrace1.67.0 libboost-system-dev libboost-system1.67-dev libboost-system1.67.0 libboost-test-dev libboost-test1.67-dev libboost-test1.67.0 libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0 libboost-timer-dev libboost-timer1.67-dev libboost-timer1.67.0 libboost-tools-dev libboost-type-erasure-dev libboost-type-erasure1.67-dev libboost-type-erasure1.67.0 libboost-wave-dev libboost-wave1.67-dev libboost-wave1.67.0 libboost1.67-dev libboost1.67-tools-dev libbrotli1 libbsd0 libcairo-gobject2 libcairo-script-interpreter2 libcairo2 libcairo2-dev libcdt5 libcgraph6 libclang1-9 libcolord2 libcroco3 libcups2 libcurl4 libdatrie1 libdbus-1-3 libdconf1 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libeigen3-dev libelf1 libepoxy0 libevent-2.1-7 libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libexpat1 libexpat1-dev libffi-dev libfile-stripnondeterminism-perl libfontconfig1 libfontconfig1-dev libfreetype-dev libfreetype6 libfreetype6-dev libfribidi0 libgcc-8-dev libgd3 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran-8-dev libgfortran5 libgl-dev libgl1 libgl1-mesa-dev libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2 libgssapi3-heimdal libgtk-3-0 libgtk-3-common libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz-icu0 libharfbuzz0b libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhwloc-dev libhwloc-plugins libhwloc15 libhx509-5-heimdal libibverbs-dev libibverbs1 libice-dev libice6 libicu-dev libicu63 libidn11 libijs-0.35 libjbig0 libjbig2dec0 libjpeg-turbo8 libjpeg8 libjson-glib-1.0-0 libjson-glib-1.0-common libjsoncpp1 libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblab-gamut1 liblcms2-2 libldap-2.4-2 libldap-common libllvm9 libltdl-dev libltdl7 liblzo2-2 libmagic-mgc libmagic1 libmount-dev libmpdec2 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnotify4 libnuma-dev libnuma1 libopenmpi-dev libopenmpi3 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpathplan4 libpciaccess0 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libperl-dev libpipeline1 libpixman-1-0 libpixman-1-dev libpmix2 libpng-dev libproxy1v5 libpsl5 libptexenc1 libpthread-stubs0-dev libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib librest-0.7-0 librhash0 libroken18-heimdal librsvg2-2 librsvg2-common librtmp1 libsasl2-2 libsasl2-modules-db libschroedinger-maeparser-dev libschroedinger-maeparser1 libselinux1-dev libsensors-config libsensors5 libsepol1-dev libsigsegv2 libsm-dev libsm6 libsoup-gnome2.4-1 libsoup2.4-1 libssh-4 libsub-override-perl libsynctex2 libteckit0 libtexlua53 libthai-data libthai0 libtiff5 libtool libuchardet0 libuv1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwind0-heimdal libwxbase3.0-0v5 libwxbase3.0-dev libwxgtk3.0-gtk3-0v5 libwxgtk3.0-gtk3-dev libx11-6 libx11-data libx11-dev libx11-xcb1 libxapian30 libxau-dev libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-render0-dev libxcb-shm0 libxcb-shm0-dev libxcb-sync1 libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml2 libxml2-dev libxmu6 libxnvctrl0 libxpm4 libxrandr2 libxrender-dev libxrender1 libxshmfence1 libxt6 libxxf86vm1 libzzip-0-13 m4 man-db mime-support mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client pkg-config po-debconf poppler-data python2 python2-dev python2-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-dev python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3-setuptools python3.7 python3.7-dev python3.7-minimal rapidjson-dev sbuild-build-depends-openbabel-dummy shared-mime-info swig swig3.0 t1utils tex-common texlive-base texlive-binaries texlive-latex-base ubuntu-mono ucf uuid-dev wx-common wx3.0-headers x11-common x11proto-core-dev x11proto-dev x11proto-xext-dev xdg-utils xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 448 newly installed, 0 to remove and 0 not upgraded. Need to get 221 MB of archives. After this operation, 1669 MB of additional disk space will be used. Get:1 copy:/<>/resolver-LiRfMx/apt_archive ./ sbuild-build-depends-openbabel-dummy 0.invalid.0 [1024 B] Get:2 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libpython3.7-minimal arm64 3.7.6-1ubuntu2 [547 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main arm64 libexpat1 arm64 2.2.9-1 [61.3 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3.7-minimal arm64 3.7.6-1ubuntu2 [1723 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main arm64 python3-minimal arm64 3.7.5-1ubuntu1 [23.3 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main arm64 mime-support all 3.64ubuntu1 [30.6 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main arm64 libmpdec2 arm64 2.4.2-2 [74.0 kB] Get:8 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libpython3.7-stdlib arm64 3.7.6-1ubuntu2 [1717 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3.7 arm64 3.7.6-1ubuntu2 [304 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main arm64 libpython3-stdlib arm64 3.7.5-1ubuntu1 [6844 B] Get:11 http://ftpmaster.internal/ubuntu focal/main arm64 python3 arm64 3.7.5-1ubuntu1 [47.2 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main arm64 libbsd0 arm64 0.10.0-1 [43.7 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main arm64 bsdmainutils arm64 11.1.2ubuntu2 [175 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main arm64 libuchardet0 arm64 0.0.6-3 [65.0 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main arm64 groff-base arm64 1.22.4-4 [815 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main arm64 libpipeline1 arm64 1.5.2-2 [26.0 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main arm64 man-db arm64 2.9.0-2 [1097 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main arm64 poppler-data all 0.4.9-2 [1475 kB] Get:19 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libpython2.7-minimal arm64 2.7.17-1ubuntu5 [335 kB] Get:20 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 python2.7-minimal arm64 2.7.17-1ubuntu5 [1227 kB] Get:21 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 python2-minimal arm64 2.7.17-2ubuntu2 [27.5 kB] Get:22 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libpython2.7-stdlib arm64 2.7.17-1ubuntu5 [1866 kB] Get:23 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 python2.7 arm64 2.7.17-1ubuntu5 [248 kB] Get:24 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libpython2-stdlib arm64 2.7.17-2ubuntu2 [7144 B] Get:25 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 python2 arm64 2.7.17-2ubuntu2 [26.5 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main arm64 ucf all 3.0038+nmu1 [51.6 kB] Get:27 http://ftpmaster.internal/ubuntu focal/universe arm64 tex-common all 6.13 [32.7 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main arm64 libdbus-1-3 arm64 1.12.16-2ubuntu2 [169 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main arm64 dbus arm64 1.12.16-2ubuntu2 [142 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[575 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main arm64 python3-pkg-resources all 44.0.0-1 [100 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main arm64 shared-mime-info arm64 1.10-1 [427 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main arm64 xkb-data all 2.26-2ubuntu3 [335 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main arm64 gettext-base arm64 0.19.8.1-10 [48.4 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main arm64 libdrm-common all 2.4.100-4 [5340 B] Get:45 http://ftpmaster.internal/ubuntu focal/main arm64 libdrm2 arm64 2.4.100-4 [31.6 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main arm64 libedit2 arm64 3.1-20191231-1 [82.7 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main arm64 libevent-2.1-7 arm64 2.1.11-stable-1 [125 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main arm64 libkrb5support0 arm64 1.17-6ubuntu3 [30.4 kB] Get:49 http://ftpmaster.internal/ubuntu focal/main arm64 libk5crypto3 arm64 1.17-6ubuntu3 [80.5 kB] Get:50 http://ftpmaster.internal/ubuntu focal/main arm64 libkeyutils1 arm64 1.6-6ubuntu1 [10.1 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main arm64 libkrb5-3 arm64 1.17-6ubuntu3 [312 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main arm64 libgssapi-krb5-2 arm64 1.17-6ubuntu3 [113 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main arm64 libnuma1 arm64 2.0.12-1 [20.5 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main arm64 libpsl5 arm64 0.20.2-2 [49.9 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main arm64 libxau6 arm64 1:1.0.9-0ubuntu1 [7356 B] Get:56 http://ftpmaster.internal/ubuntu focal/main arm64 libxdmcp6 arm64 1:1.1.3-0ubuntu1 [10.3 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main arm64 libxcb1 arm64 1.13.1-3build1 [43.8 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main arm64 libx11-data all 2:1.6.8-1 [113 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main arm64 libx11-6 arm64 2:1.6.8-1 [553 kB] Get:60 http://ftpmaster.internal/ubuntu focal/main arm64 libxext6 arm64 2:1.3.4-0ubuntu1 [27.7 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main arm64 openssh-client arm64 1:8.1p1-5 [591 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main arm64 hicolor-icon-theme all 0.17-2 [9976 B] Get:63 http://ftpmaster.internal/ubuntu focal/main arm64 libjpeg-turbo8 arm64 2.0.3-0ubuntu1 [101 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main arm64 libjpeg8 arm64 8c-2ubuntu8 [2198 B] Get:65 http://ftpmaster.internal/ubuntu focal/main arm64 libjbig0 arm64 2.1-3.1build1 [24.0 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main arm64 libwebp6 arm64 0.6.1-2 [155 kB] Get:67 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libtiff5 arm64 4.1.0+git191117-2 [150 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main arm64 libgdk-pixbuf2.0-common all 2.40.0+dfsg-2 [5000 B] Get:69 http://ftpmaster.internal/ubuntu focal/main arm64 libgdk-pixbuf2.0-0 arm64 2.40.0+dfsg-2 [157 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main arm64 gtk-update-icon-cache arm64 3.24.13-1ubuntu1 [29.1 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main arm64 libfreetype6 arm64 2.10.1-2 [316 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main arm64 fonts-dejavu-core all 2.37-1 [1041 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main arm64 fontconfig-config all 2.13.1-2ubuntu2 [28.9 kB] Get:74 http://ftpmaster.internal/ubuntu focal/main arm64 libfontconfig1 arm64 2.13.1-2ubuntu2 [111 kB] Get:75 http://ftpmaster.internal/ubuntu focal/main arm64 libpixman-1-0 arm64 0.38.4-0ubuntu1 [130 kB] Get:76 http://ftpmaster.internal/ubuntu focal/main arm64 libxcb-render0 arm64 1.13.1-3build1 [14.7 kB] Get:77 http://ftpmaster.internal/ubuntu focal/main arm64 libxcb-shm0 arm64 1.13.1-3build1 [5564 B] Get:78 http://ftpmaster.internal/ubuntu focal/main arm64 libxrender1 arm64 1:0.9.10-1 [16.1 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main arm64 libcairo2 arm64 1.16.0-4ubuntu1 [538 kB] Get:80 http://ftpmaster.internal/ubuntu focal/main arm64 libcroco3 arm64 0.6.13-1 [77.1 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main arm64 fontconfig arm64 2.13.1-2ubuntu2 [171 kB] Get:82 http://ftpmaster.internal/ubuntu focal/main arm64 libgraphite2-3 arm64 1.3.13-11 [67.8 kB] Get:83 http://ftpmaster.internal/ubuntu focal/main arm64 libharfbuzz0b arm64 2.6.4-1ubuntu1 [353 kB] Get:84 http://ftpmaster.internal/ubuntu focal/main arm64 libthai-data all 0.1.28-3 [134 kB] Get:85 http://ftpmaster.internal/ubuntu focal/main arm64 libdatrie1 arm64 0.2.12-3 [17.9 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main arm64 libthai0 arm64 0.1.28-3 [16.8 kB] Get:87 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libpango-1.0-0 arm64 1.44.7-1ubuntu1 [153 kB] Get:88 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libpangoft2-1.0-0 arm64 1.44.7-1ubuntu1 [32.0 kB] Get:89 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libpangocairo-1.0-0 arm64 1.44.7-1ubuntu1 [22.5 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main arm64 librsvg2-2 arm64 2.46.4-1ubuntu1 [1120 kB] Get:91 http://ftpmaster.internal/ubuntu focal/main arm64 librsvg2-common arm64 2.46.4-1ubuntu1 [9060 B] Get:92 http://ftpmaster.internal/ubuntu focal/main arm64 humanity-icon-theme all 0.6.15 [1250 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main arm64 ubuntu-mono all 19.04-0ubuntu2 [148 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main arm64 adwaita-icon-theme all 3.34.0-1ubuntu1 [3162 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main arm64 libsigsegv2 arm64 2.12-2 [13.3 kB] Get:96 http://ftpmaster.internal/ubuntu focal/main arm64 m4 arm64 1.4.18-4 [194 kB] Get:97 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 autoconf all 2.69-11.1 [321 kB] Get:98 http://ftpmaster.internal/ubuntu focal/main arm64 autotools-dev all 20180224.1 [39.6 kB] Get:99 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 automake all 1:1.16.1-4ubuntu4 [522 kB] Get:100 http://ftpmaster.internal/ubuntu focal/main arm64 autopoint all 0.19.8.1-10 [412 kB] Get:101 http://ftpmaster.internal/ubuntu focal/main arm64 cmake-data all 3.15.4-1ubuntu3 [1562 kB] Get:102 http://ftpmaster.internal/ubuntu focal/main arm64 libarchive13 arm64 3.4.0-1build1 [304 kB] Get:103 http://ftpmaster.internal/ubuntu focal/main arm64 libbrotli1 arm64 1.0.7-6 [257 kB] Get:104 http://ftpmaster.internal/ubuntu focal/main arm64 libroken18-heimdal arm64 7.7.0+dfsg-1 [39.3 kB] Get:105 http://ftpmaster.internal/ubuntu focal/main arm64 libasn1-8-heimdal arm64 7.7.0+dfsg-1 [150 kB] Get:106 http://ftpmaster.internal/ubuntu focal/main arm64 libheimbase1-heimdal arm64 7.7.0+dfsg-1 [27.9 kB] Get:107 http://ftpmaster.internal/ubuntu focal/main arm64 libhcrypto4-heimdal arm64 7.7.0+dfsg-1 [86.5 kB] Get:108 http://ftpmaster.internal/ubuntu focal/main arm64 libwind0-heimdal arm64 7.7.0+dfsg-1 [47.2 kB] Get:109 http://ftpmaster.internal/ubuntu focal/main arm64 libhx509-5-heimdal arm64 7.7.0+dfsg-1 [98.6 kB] Get:110 http://ftpmaster.internal/ubuntu focal/main arm64 libkrb5-26-heimdal arm64 7.7.0+dfsg-1 [192 kB] Get:111 http://ftpmaster.internal/ubuntu focal/main arm64 libheimntlm0-heimdal arm64 7.7.0+dfsg-1 [14.8 kB] Get:112 http://ftpmaster.internal/ubuntu focal/main arm64 libgssapi3-heimdal arm64 7.7.0+dfsg-1 [88.3 kB] Get:113 http://ftpmaster.internal/ubuntu focal/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-2 [15.1 kB] Get:114 http://ftpmaster.internal/ubuntu focal/main arm64 libsasl2-2 arm64 2.1.27+dfsg-2 [48.4 kB] Get:115 http://ftpmaster.internal/ubuntu focal/main arm64 libldap-common all 2.4.48+dfsg-1ubuntu4 [16.9 kB] Get:116 http://ftpmaster.internal/ubuntu focal/main arm64 libldap-2.4-2 arm64 2.4.48+dfsg-1ubuntu4 [145 kB] Get:117 http://ftpmaster.internal/ubuntu focal/main arm64 libnghttp2-14 arm64 1.40.0-1 [75.2 kB] Get:118 http://ftpmaster.internal/ubuntu focal/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2build1 [53.3 kB] Get:119 http://ftpmaster.internal/ubuntu focal/main arm64 libssh-4 arm64 0.9.3-2ubuntu1 [159 kB] Get:120 http://ftpmaster.internal/ubuntu focal/main arm64 libcurl4 arm64 7.66.0-1ubuntu1 [213 kB] Get:121 http://ftpmaster.internal/ubuntu focal/main arm64 libjsoncpp1 arm64 1.7.4-3 [69.2 kB] Get:122 http://ftpmaster.internal/ubuntu focal/main arm64 librhash0 arm64 1.3.9-1 [111 kB] Get:123 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libuv1 arm64 1.33.1-2ubuntu1 [74.5 kB] Get:124 http://ftpmaster.internal/ubuntu focal/main arm64 cmake arm64 3.15.4-1ubuntu3 [3010 kB] Get:125 http://ftpmaster.internal/ubuntu focal/universe arm64 gcc-8-base arm64 8.3.0-26ubuntu1 [18.4 kB] Get:126 http://ftpmaster.internal/ubuntu focal/universe arm64 cpp-8 arm64 8.3.0-26ubuntu1 [7387 kB] Get:127 http://ftpmaster.internal/ubuntu focal/main arm64 dbus-user-session arm64 1.12.16-2ubuntu2 [9424 B] Get:128 http://ftpmaster.internal/ubuntu focal/main arm64 libdconf1 arm64 0.34.0-2 [35.4 kB] Get:129 http://ftpmaster.internal/ubuntu focal/main arm64 dconf-service arm64 0.34.0-2 [27.5 kB] Get:130 http://ftpmaster.internal/ubuntu focal/main arm64 dconf-gsettings-backend arm64 0.34.0-2 [20.7 kB] Get:131 http://ftpmaster.internal/ubuntu focal/universe arm64 libgcc-8-dev arm64 8.3.0-26ubuntu1 [860 kB] Get:132 http://ftpmaster.internal/ubuntu focal/universe arm64 gcc-8 arm64 8.3.0-26ubuntu1 [8230 kB] Get:133 http://ftpmaster.internal/ubuntu focal/main arm64 libtool all 2.4.6-11 [194 kB] Get:134 http://ftpmaster.internal/ubuntu focal/main arm64 dh-autoreconf all 19 [16.1 kB] Get:135 http://ftpmaster.internal/ubuntu focal/main arm64 libdebhelper-perl all 12.7.3ubuntu1 [52.1 kB] Get:136 http://ftpmaster.internal/ubuntu focal/main arm64 libarchive-zip-perl all 1.67-1 [90.4 kB] Get:137 http://ftpmaster.internal/ubuntu focal/main arm64 libsub-override-perl all 0.09-2 [9532 B] Get:138 http://ftpmaster.internal/ubuntu focal/main arm64 libfile-stripnondeterminism-perl all 1.6.3-2 [16.0 kB] Get:139 http://ftpmaster.internal/ubuntu focal/main arm64 dh-strip-nondeterminism all 1.6.3-2 [5228 B] Get:140 http://ftpmaster.internal/ubuntu focal/main arm64 dwz arm64 0.13-5 [134 kB] Get:141 http://ftpmaster.internal/ubuntu focal/main arm64 gettext arm64 0.19.8.1-10 [851 kB] Get:142 http://ftpmaster.internal/ubuntu focal/main arm64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:143 http://ftpmaster.internal/ubuntu focal/main arm64 po-debconf all 1.0.21 [233 kB] Get:144 http://ftpmaster.internal/ubuntu focal/main arm64 debhelper all 12.7.3ubuntu1 [896 kB] Get:145 http://ftpmaster.internal/ubuntu focal/main arm64 python3-lib2to3 all 3.8.0-1 [75.6 kB] Get:146 http://ftpmaster.internal/ubuntu focal/main arm64 python3-distutils all 3.8.0-1 [142 kB] Get:147 http://ftpmaster.internal/ubuntu focal/main arm64 dh-python all 4.20191017ubuntu4 [88.2 kB] Get:148 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libllvm9 arm64 1:9.0.1-6build2 [12.4 MB] Get:149 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libclang1-9 arm64 1:9.0.1-6build2 [5483 kB] Get:150 http://ftpmaster.internal/ubuntu focal/universe arm64 libxapian30 arm64 1.4.12-1 [583 kB] Get:151 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 doxygen arm64 1.8.16-2 [7805 kB] Get:152 http://ftpmaster.internal/ubuntu focal/universe arm64 fonts-lmodern all 2.004.5-6 [4532 kB] Get:153 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libgfortran5 arm64 9.2.1-24ubuntu1 [333 kB] Get:154 http://ftpmaster.internal/ubuntu focal/universe arm64 libgfortran-8-dev arm64 8.3.0-26ubuntu1 [357 kB] Get:155 http://ftpmaster.internal/ubuntu focal/universe arm64 gfortran-8 arm64 8.3.0-26ubuntu1 [7863 kB] Get:156 http://ftpmaster.internal/ubuntu focal/main arm64 libavahi-common-data arm64 0.7-4ubuntu6 [21.3 kB] Get:157 http://ftpmaster.internal/ubuntu focal/main arm64 libavahi-common3 arm64 0.7-4ubuntu6 [20.4 kB] Get:158 http://ftpmaster.internal/ubuntu focal/main arm64 libavahi-client3 arm64 0.7-4ubuntu6 [24.2 kB] Get:159 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libcups2 arm64 2.3.1-1ubuntu1 [218 kB] Get:160 http://ftpmaster.internal/ubuntu focal/main arm64 libidn11 arm64 1.33-2.2ubuntu2 [45.3 kB] Get:161 http://ftpmaster.internal/ubuntu focal/main arm64 libijs-0.35 arm64 0.35-15 [15.1 kB] Get:162 http://ftpmaster.internal/ubuntu focal/main arm64 libjbig2dec0 arm64 0.17-1 [55.1 kB] Get:163 http://ftpmaster.internal/ubuntu focal/main arm64 libpaper1 arm64 1.1.28 [12.7 kB] Get:164 http://ftpmaster.internal/ubuntu focal/main arm64 libgs9-common all 9.27~dfsg+0-0ubuntu4 [5093 kB] Get:165 http://ftpmaster.internal/ubuntu focal/main arm64 libgs9 arm64 9.27~dfsg+0-0ubuntu4 [2205 kB] Get:166 http://ftpmaster.internal/ubuntu focal/main arm64 ghostscript arm64 9.27~dfsg+0-0ubuntu4 [51.6 kB] Get:167 http://ftpmaster.internal/ubuntu focal/main arm64 libproxy1v5 arm64 0.4.15-9build1 [46.0 kB] Get:168 http://ftpmaster.internal/ubuntu focal/main arm64 glib-networking-common all 2.63.2-1 [3380 B] Get:169 http://ftpmaster.internal/ubuntu focal/main arm64 glib-networking-services arm64 2.63.2-1 [8800 B] Get:170 http://ftpmaster.internal/ubuntu focal/main arm64 gsettings-desktop-schemas all 3.34.0-1ubuntu1 [29.0 kB] Get:171 http://ftpmaster.internal/ubuntu focal/main arm64 glib-networking arm64 2.63.2-1 [54.0 kB] Get:172 http://ftpmaster.internal/ubuntu focal/universe arm64 libann0 arm64 1.1.2+doc-7 [25.1 kB] Get:173 http://ftpmaster.internal/ubuntu focal/universe arm64 libcdt5 arm64 2.42.2-3 [17.6 kB] Get:174 http://ftpmaster.internal/ubuntu focal/universe arm64 libcgraph6 arm64 2.42.2-3 [38.8 kB] Get:175 http://ftpmaster.internal/ubuntu focal/main arm64 libxpm4 arm64 1:3.5.12-1 [28.8 kB] Get:176 http://ftpmaster.internal/ubuntu focal/main arm64 libgd3 arm64 2.2.5-5.2 [108 kB] Get:177 http://ftpmaster.internal/ubuntu focal/universe arm64 libgts-0.7-5 arm64 0.7.6+darcs121130-4 [117 kB] Get:178 http://ftpmaster.internal/ubuntu focal/main arm64 libltdl7 arm64 2.4.6-11 [37.3 kB] Get:179 http://ftpmaster.internal/ubuntu focal/universe arm64 libpathplan4 arm64 2.42.2-3 [20.1 kB] Get:180 http://ftpmaster.internal/ubuntu focal/universe arm64 libgvc6 arm64 2.42.2-3 [585 kB] Get:181 http://ftpmaster.internal/ubuntu focal/universe arm64 libgvpr2 arm64 2.42.2-3 [157 kB] Get:182 http://ftpmaster.internal/ubuntu focal/universe arm64 liblab-gamut1 arm64 2.42.2-3 [177 kB] Get:183 http://ftpmaster.internal/ubuntu focal/main arm64 x11-common all 1:7.7+19ubuntu13 [22.4 kB] Get:184 http://ftpmaster.internal/ubuntu focal/main arm64 libice6 arm64 2:1.0.10-0ubuntu1 [37.7 kB] Get:185 http://ftpmaster.internal/ubuntu focal/main arm64 libsm6 arm64 2:1.2.3-1 [15.1 kB] Get:186 http://ftpmaster.internal/ubuntu focal/main arm64 libxt6 arm64 1:1.1.5-1 [128 kB] Get:187 http://ftpmaster.internal/ubuntu focal/main arm64 libxmu6 arm64 2:1.1.3-0ubuntu1 [42.9 kB] Get:188 http://ftpmaster.internal/ubuntu focal/main arm64 libxaw7 arm64 2:1.0.13-1 [137 kB] Get:189 http://ftpmaster.internal/ubuntu focal/universe arm64 graphviz arm64 2.42.2-3 [552 kB] Get:190 http://ftpmaster.internal/ubuntu focal/main arm64 libnl-3-200 arm64 3.4.0-1 [51.5 kB] Get:191 http://ftpmaster.internal/ubuntu focal/main arm64 libnl-route-3-200 arm64 3.4.0-1 [138 kB] Get:192 http://ftpmaster.internal/ubuntu focal/main arm64 libibverbs1 arm64 27.0-2 [50.7 kB] Get:193 http://ftpmaster.internal/ubuntu focal/main arm64 ibverbs-providers arm64 27.0-2 [212 kB] Get:194 http://ftpmaster.internal/ubuntu focal/main arm64 icu-devtools arm64 63.2-2 [170 kB] Get:195 http://ftpmaster.internal/ubuntu focal/main arm64 libatk1.0-data all 2.34.1-1ubuntu1 [2880 B] Get:196 http://ftpmaster.internal/ubuntu focal/main arm64 libatk1.0-0 arm64 2.34.1-1ubuntu1 [42.5 kB] Get:197 http://ftpmaster.internal/ubuntu focal/main arm64 libatspi2.0-0 arm64 2.34.0-3ubuntu2 [60.7 kB] Get:198 http://ftpmaster.internal/ubuntu focal/main arm64 libatk-bridge2.0-0 arm64 2.34.1-2ubuntu1 [55.1 kB] Get:199 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost1.67-dev arm64 1.67.0-17ubuntu4 [8363 kB] Get:200 http://ftpmaster.internal/ubuntu focal/main arm64 libboost-dev arm64 1.67.0.2ubuntu1 [3596 B] Get:201 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost1.67-tools-dev arm64 1.67.0-17ubuntu4 [1324 kB] Get:202 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-tools-dev arm64 1.67.0.2ubuntu1 [3572 B] Get:203 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-atomic1.67.0 arm64 1.67.0-17ubuntu4 [201 kB] Get:204 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-atomic1.67-dev arm64 1.67.0-17ubuntu4 [199 kB] Get:205 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-atomic-dev arm64 1.67.0.2ubuntu1 [3700 B] Get:206 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-system1.67.0 arm64 1.67.0-17ubuntu4 [205 kB] Get:207 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-chrono1.67.0 arm64 1.67.0-17ubuntu4 [207 kB] Get:208 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-chrono1.67-dev arm64 1.67.0-17ubuntu4 [210 kB] Get:209 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-chrono-dev arm64 1.67.0.2ubuntu1 [4020 B] Get:210 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-container1.67.0 arm64 1.67.0-17ubuntu4 [230 kB] Get:211 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-container1.67-dev arm64 1.67.0-17ubuntu4 [230 kB] Get:212 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-container-dev arm64 1.67.0.2ubuntu1 [3872 B] Get:213 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-context1.67.0 arm64 1.67.0-17ubuntu4 [203 kB] Get:214 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-context1.67-dev arm64 1.67.0-17ubuntu4 [202 kB] Get:215 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-context-dev arm64 1.67.0.2ubuntu1 [3592 B] Get:216 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-thread1.67.0 arm64 1.67.0-17ubuntu4 [240 kB] Get:217 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-coroutine1.67.0 arm64 1.67.0-17ubuntu4 [214 kB] Get:218 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-coroutine1.67-dev arm64 1.67.0-17ubuntu4 [217 kB] Get:219 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-coroutine-dev arm64 1.67.0.2ubuntu1 [3672 B] Get:220 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-date-time1.67.0 arm64 1.67.0-17ubuntu4 [214 kB] Get:221 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-serialization1.67.0 arm64 1.67.0-17ubuntu4 [284 kB] Get:222 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-serialization1.67-dev arm64 1.67.0-17ubuntu4 [329 kB] Get:223 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-date-time1.67-dev arm64 1.67.0-17ubuntu4 [222 kB] Get:224 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-date-time-dev arm64 1.67.0.2ubuntu1 [3400 B] Get:225 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-exception1.67-dev arm64 1.67.0-17ubuntu4 [198 kB] Get:226 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-exception-dev arm64 1.67.0.2ubuntu1 [3388 B] Get:227 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-filesystem1.67.0 arm64 1.67.0-17ubuntu4 [230 kB] Get:228 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-fiber1.67.0 arm64 1.67.0-17ubuntu4 [298 kB] Get:229 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-fiber1.67-dev arm64 1.67.0-17ubuntu4 [316 kB] Get:230 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-fiber-dev arm64 1.67.0.2ubuntu1 [3820 B] Get:231 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-system1.67-dev arm64 1.67.0-17ubuntu4 [205 kB] Get:232 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-filesystem1.67-dev arm64 1.67.0-17ubuntu4 [241 kB] Get:233 http://ftpmaster.internal/ubuntu focal/main arm64 libboost-filesystem-dev arm64 1.67.0.2ubuntu1 [3432 B] Get:234 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-regex1.67.0 arm64 1.67.0-17ubuntu4 [455 kB] Get:235 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-graph1.67.0 arm64 1.67.0-17ubuntu4 [290 kB] Get:236 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-test1.67.0 arm64 1.67.0-17ubuntu4 [411 kB] Get:237 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-test1.67-dev arm64 1.67.0-17ubuntu4 [480 kB] Get:238 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-graph1.67-dev arm64 1.67.0-17ubuntu4 [305 kB] Get:239 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-graph-dev arm64 1.67.0.2ubuntu1 [3500 B] Get:240 http://ftpmaster.internal/ubuntu focal/main arm64 libevent-core-2.1-7 arm64 2.1.11-stable-1 [82.2 kB] Get:241 http://ftpmaster.internal/ubuntu focal/main arm64 libevent-pthreads-2.1-7 arm64 2.1.11-stable-1 [7292 B] Get:242 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libhwloc15 arm64 2.1.0+dfsg-3 [116 kB] Get:243 http://ftpmaster.internal/ubuntu focal/main arm64 libpciaccess0 arm64 0.16-0ubuntu1 [17.1 kB] Get:244 http://ftpmaster.internal/ubuntu focal/main arm64 libxnvctrl0 arm64 435.21-0ubuntu2 [10.7 kB] Get:245 http://ftpmaster.internal/ubuntu focal/main arm64 ocl-icd-libopencl1 arm64 2.2.11-1ubuntu1 [29.2 kB] Get:246 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libhwloc-plugins arm64 2.1.0+dfsg-3 [13.8 kB] Get:247 http://ftpmaster.internal/ubuntu focal/universe arm64 libpmix2 arm64 3.1.4-1build1 [396 kB] Get:248 http://ftpmaster.internal/ubuntu focal/universe arm64 libopenmpi3 arm64 4.0.2-5 [1810 kB] Get:249 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-mpi1.67.0 arm64 1.67.0-17ubuntu4 [242 kB] Get:250 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-graph-parallel1.67.0 arm64 1.67.0-17ubuntu4 [256 kB] Get:251 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-graph-parallel1.67-dev arm64 1.67.0-17ubuntu4 [263 kB] Get:252 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-graph-parallel-dev arm64 1.67.0.2ubuntu1 [3524 B] Get:253 http://ftpmaster.internal/ubuntu focal/main arm64 libicu-dev arm64 63.2-2 [9055 kB] Get:254 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-regex1.67-dev arm64 1.67.0-17ubuntu4 [516 kB] Get:255 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-iostreams1.67.0 arm64 1.67.0-17ubuntu4 [223 kB] Get:256 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-iostreams1.67-dev arm64 1.67.0-17ubuntu4 [229 kB] Get:257 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-iostreams-dev arm64 1.67.0.2ubuntu1 [3384 B] Get:258 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-locale1.67.0 arm64 1.67.0-17ubuntu4 [413 kB] Get:259 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-locale1.67-dev arm64 1.67.0-17ubuntu4 [519 kB] Get:260 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-locale-dev arm64 1.67.0.2ubuntu1 [3720 B] Get:261 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-log1.67.0 arm64 1.67.0-17ubuntu4 [543 kB] Get:262 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-thread1.67-dev arm64 1.67.0-17ubuntu4 [244 kB] Get:263 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-log1.67-dev arm64 1.67.0-17ubuntu4 [748 kB] Get:264 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-log-dev arm64 1.67.0.2ubuntu1 [3592 B] Get:265 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-math1.67.0 arm64 1.67.0-17ubuntu4 [438 kB] Get:266 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-math1.67-dev arm64 1.67.0-17ubuntu4 [650 kB] Get:267 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-math-dev arm64 1.67.0.2ubuntu1 [3588 B] Get:268 http://ftpmaster.internal/ubuntu focal/universe arm64 openmpi-common all 4.0.2-5 [150 kB] Get:269 http://ftpmaster.internal/ubuntu focal/main arm64 libnl-3-dev arm64 3.4.0-1 [93.7 kB] Get:270 http://ftpmaster.internal/ubuntu focal/main arm64 libnl-route-3-dev arm64 3.4.0-1 [166 kB] Get:271 http://ftpmaster.internal/ubuntu focal/main arm64 libibverbs-dev arm64 27.0-2 [431 kB] Get:272 http://ftpmaster.internal/ubuntu focal/main arm64 libnuma-dev arm64 2.0.12-1 [33.3 kB] Get:273 http://ftpmaster.internal/ubuntu focal/main arm64 libltdl-dev arm64 2.4.6-11 [162 kB] Get:274 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libhwloc-dev arm64 2.1.0+dfsg-3 [191 kB] Get:275 http://ftpmaster.internal/ubuntu focal/main arm64 libevent-extra-2.1-7 arm64 2.1.11-stable-1 [54.2 kB] Get:276 http://ftpmaster.internal/ubuntu focal/main arm64 libevent-openssl-2.1-7 arm64 2.1.11-stable-1 [13.2 kB] Get:277 http://ftpmaster.internal/ubuntu focal/main arm64 libevent-dev arm64 2.1.11-stable-1 [258 kB] Get:278 http://ftpmaster.internal/ubuntu focal/universe arm64 openmpi-bin arm64 4.0.2-5 [68.0 kB] Get:279 http://ftpmaster.internal/ubuntu focal/universe arm64 libopenmpi-dev arm64 4.0.2-5 [797 kB] Get:280 http://ftpmaster.internal/ubuntu focal/universe arm64 mpi-default-dev arm64 1.13 [3748 B] Get:281 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-mpi1.67-dev arm64 1.67.0-17ubuntu4 [359 kB] Get:282 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-mpi-dev arm64 1.67.0.2ubuntu1 [3480 B] Get:283 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-python1.67.0 arm64 1.67.0-17ubuntu4 [328 kB] Get:284 http://ftpmaster.internal/ubuntu focal/universe arm64 mpi-default-bin arm64 1.13 [2968 B] Get:285 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-mpi-python1.67.0 arm64 1.67.0-17ubuntu4 [479 kB] Get:286 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-mpi-python1.67-dev arm64 1.67.0-17ubuntu4 [225 kB] Get:287 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-mpi-python-dev arm64 1.67.0.2ubuntu1 [3516 B] Get:288 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-numpy1.67.0 arm64 1.67.0-17ubuntu4 [215 kB] Get:289 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-numpy1.67-dev arm64 1.67.0-17ubuntu4 [219 kB] Get:290 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-numpy-dev arm64 1.67.0.2ubuntu1 [3432 B] Get:291 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-program-options1.67.0 arm64 1.67.0-17ubuntu4 [316 kB] Get:292 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-program-options1.67-dev arm64 1.67.0-17ubuntu4 [351 kB] Get:293 http://ftpmaster.internal/ubuntu focal/main arm64 libboost-program-options-dev arm64 1.67.0.2ubuntu1 [3408 B] Get:294 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libpython2.7 arm64 2.7.17-1ubuntu5 [958 kB] Get:295 http://ftpmaster.internal/ubuntu focal/main arm64 libexpat1-dev arm64 2.2.9-1 [103 kB] Get:296 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libpython2.7-dev arm64 2.7.17-1ubuntu5 [2352 kB] Get:297 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libpython2-dev arm64 2.7.17-2ubuntu2 [7208 B] Get:298 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 python2.7-dev arm64 2.7.17-1ubuntu5 [288 kB] Get:299 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 python2-dev arm64 2.7.17-2ubuntu2 [1272 B] Get:300 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libpython3.7 arm64 3.7.6-1ubuntu2 [1373 kB] Get:301 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libpython3.7-dev arm64 3.7.6-1ubuntu2 [3051 kB] Get:302 http://ftpmaster.internal/ubuntu focal/main arm64 libpython3-dev arm64 3.7.5-1ubuntu1 [6940 B] Get:303 http://ftpmaster.internal/ubuntu focal/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-1ubuntu3 [170 kB] Get:304 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 python3.7-dev arm64 3.7.6-1ubuntu2 [520 kB] Get:305 http://ftpmaster.internal/ubuntu focal/main arm64 python3-dev arm64 3.7.5-1ubuntu1 [1312 B] Get:306 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-python1.67-dev arm64 1.67.0-17ubuntu4 [345 kB] Get:307 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-python-dev arm64 1.67.0.2ubuntu1 [3692 B] Get:308 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libboost-random1.67.0 arm64 1.67.0-17ubuntu4 [206 kB] Get:309 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-random1.67-dev arm64 1.67.0-17ubuntu4 [207 kB] Get:310 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-random-dev arm64 1.67.0.2ubuntu1 [3400 B] Get:311 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-regex-dev arm64 1.67.0.2ubuntu1 [3660 B] Get:312 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-serialization-dev arm64 1.67.0.2ubuntu1 [3624 B] Get:313 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-signals1.67.0 arm64 1.67.0-17ubuntu4 [224 kB] Get:314 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-signals1.67-dev arm64 1.67.0-17ubuntu4 [227 kB] Get:315 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-signals-dev arm64 1.67.0.2ubuntu1 [3468 B] Get:316 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-stacktrace1.67.0 arm64 1.67.0-17ubuntu4 [238 kB] Get:317 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-stacktrace1.67-dev arm64 1.67.0-17ubuntu4 [217 kB] Get:318 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-stacktrace-dev arm64 1.67.0.2ubuntu1 [3392 B] Get:319 http://ftpmaster.internal/ubuntu focal/main arm64 libboost-system-dev arm64 1.67.0.2ubuntu1 [3536 B] Get:320 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-test-dev arm64 1.67.0.2ubuntu1 [3432 B] Get:321 http://ftpmaster.internal/ubuntu focal/main arm64 libboost-thread-dev arm64 1.67.0.2ubuntu1 [3428 B] Get:322 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-timer1.67.0 arm64 1.67.0-17ubuntu4 [205 kB] Get:323 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-timer1.67-dev arm64 1.67.0-17ubuntu4 [205 kB] Get:324 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-timer-dev arm64 1.67.0.2ubuntu1 [3516 B] Get:325 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-type-erasure1.67.0 arm64 1.67.0-17ubuntu4 [213 kB] Get:326 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-type-erasure1.67-dev arm64 1.67.0-17ubuntu4 [214 kB] Get:327 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-type-erasure-dev arm64 1.67.0.2ubuntu1 [3492 B] Get:328 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-wave1.67.0 arm64 1.67.0-17ubuntu4 [394 kB] Get:329 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libboost-wave1.67-dev arm64 1.67.0-17ubuntu4 [438 kB] Get:330 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-wave-dev arm64 1.67.0.2ubuntu1 [3424 B] Get:331 http://ftpmaster.internal/ubuntu focal/universe arm64 libboost-all-dev arm64 1.67.0.2ubuntu1 [2472 B] Get:332 http://ftpmaster.internal/ubuntu focal/main arm64 libcairo-gobject2 arm64 1.16.0-4ubuntu1 [17.0 kB] Get:333 http://ftpmaster.internal/ubuntu focal/main arm64 liblzo2-2 arm64 2.10-0.1 [42.9 kB] Get:334 http://ftpmaster.internal/ubuntu focal/main arm64 libcairo-script-interpreter2 arm64 1.16.0-4ubuntu1 [50.7 kB] Get:335 http://ftpmaster.internal/ubuntu focal/main arm64 libpng-dev arm64 1.6.37-1 [172 kB] Get:336 http://ftpmaster.internal/ubuntu focal/main arm64 libfreetype-dev arm64 2.10.1-2 [473 kB] Get:337 http://ftpmaster.internal/ubuntu focal/main arm64 libfreetype6-dev arm64 2.10.1-2 [9792 B] Get:338 http://ftpmaster.internal/ubuntu focal/main arm64 uuid-dev arm64 2.34-0.1ubuntu5 [33.9 kB] Get:339 http://ftpmaster.internal/ubuntu focal/main arm64 pkg-config arm64 0.29.1-0ubuntu3 [43.7 kB] Get:340 http://ftpmaster.internal/ubuntu focal/main arm64 libfontconfig1-dev arm64 2.13.1-2ubuntu2 [730 kB] Get:341 http://ftpmaster.internal/ubuntu focal/main arm64 xorg-sgml-doctools all 1:1.11-1 [12.9 kB] Get:342 http://ftpmaster.internal/ubuntu focal/main arm64 x11proto-dev all 2018.4-4 [251 kB] Get:343 http://ftpmaster.internal/ubuntu focal/main arm64 x11proto-core-dev all 2018.4-4 [2620 B] Get:344 http://ftpmaster.internal/ubuntu focal/main arm64 libxau-dev arm64 1:1.0.9-0ubuntu1 [9728 B] Get:345 http://ftpmaster.internal/ubuntu focal/main arm64 libxdmcp-dev arm64 1:1.1.3-0ubuntu1 [25.1 kB] Get:346 http://ftpmaster.internal/ubuntu focal/main arm64 xtrans-dev all 1.3.5-1build1 [70.7 kB] Get:347 http://ftpmaster.internal/ubuntu focal/main arm64 libpthread-stubs0-dev arm64 0.4-1 [5376 B] Get:348 http://ftpmaster.internal/ubuntu focal/main arm64 libxcb1-dev arm64 1.13.1-3build1 [80.6 kB] Get:349 http://ftpmaster.internal/ubuntu focal/main arm64 libx11-dev arm64 2:1.6.8-1 [632 kB] Get:350 http://ftpmaster.internal/ubuntu focal/main arm64 libxrender-dev arm64 1:0.9.10-1 [22.9 kB] Get:351 http://ftpmaster.internal/ubuntu focal/main arm64 x11proto-xext-dev all 2018.4-4 [2620 B] Get:352 http://ftpmaster.internal/ubuntu focal/main arm64 libxext-dev arm64 2:1.3.4-0ubuntu1 [82.1 kB] Get:353 http://ftpmaster.internal/ubuntu focal/main arm64 libice-dev arm64 2:1.0.10-0ubuntu1 [46.2 kB] Get:354 http://ftpmaster.internal/ubuntu focal/main arm64 libsm-dev arm64 2:1.2.3-1 [16.4 kB] Get:355 http://ftpmaster.internal/ubuntu focal/main arm64 libpixman-1-dev arm64 0.38.4-0ubuntu1 [147 kB] Get:356 http://ftpmaster.internal/ubuntu focal/main arm64 libxcb-render0-dev arm64 1.13.1-3build1 [18.6 kB] Get:357 http://ftpmaster.internal/ubuntu focal/main arm64 libxcb-shm0-dev arm64 1.13.1-3build1 [6896 B] Get:358 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libffi-dev arm64 3.3-3 [53.5 kB] Get:359 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libglib2.0-bin arm64 2.63.3-3 [68.7 kB] Get:360 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libglib2.0-dev-bin arm64 2.63.3-3 [105 kB] Get:361 http://ftpmaster.internal/ubuntu focal/main arm64 libblkid-dev arm64 2.34-0.1ubuntu5 [169 kB] Get:362 http://ftpmaster.internal/ubuntu focal/main arm64 libmount-dev arm64 2.34-0.1ubuntu5 [181 kB] Get:363 http://ftpmaster.internal/ubuntu focal/main arm64 libpcre16-3 arm64 2:8.39-12 [126 kB] Get:364 http://ftpmaster.internal/ubuntu focal/main arm64 libpcre32-3 arm64 2:8.39-12 [119 kB] Get:365 http://ftpmaster.internal/ubuntu focal/main arm64 libpcrecpp0v5 arm64 2:8.39-12 [14.8 kB] Get:366 http://ftpmaster.internal/ubuntu focal/main arm64 libpcre3-dev arm64 2:8.39-12 [468 kB] Get:367 http://ftpmaster.internal/ubuntu focal/main arm64 libsepol1-dev arm64 3.0-1 [317 kB] Get:368 http://ftpmaster.internal/ubuntu focal/main arm64 libpcre2-16-0 arm64 10.34-7 [156 kB] Get:369 http://ftpmaster.internal/ubuntu focal/main arm64 libpcre2-32-0 arm64 10.34-7 [147 kB] Get:370 http://ftpmaster.internal/ubuntu focal/main arm64 libpcre2-posix2 arm64 10.34-7 [5820 B] Get:371 http://ftpmaster.internal/ubuntu focal/main arm64 libpcre2-dev arm64 10.34-7 [595 kB] Get:372 http://ftpmaster.internal/ubuntu focal/main arm64 libselinux1-dev arm64 3.0-1 [152 kB] Get:373 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libglib2.0-dev arm64 2.63.3-3 [1511 kB] Get:374 http://ftpmaster.internal/ubuntu focal/main arm64 libcairo2-dev arm64 1.16.0-4ubuntu1 [598 kB] Get:375 http://ftpmaster.internal/ubuntu focal/main arm64 liblcms2-2 arm64 2.9-4 [131 kB] Get:376 http://ftpmaster.internal/ubuntu focal/main arm64 libcolord2 arm64 1.4.4-1ubuntu1 [124 kB] Get:377 http://ftpmaster.internal/ubuntu focal/main arm64 libdrm-amdgpu1 arm64 2.4.100-4 [17.8 kB] Get:378 http://ftpmaster.internal/ubuntu focal/main arm64 libdrm-nouveau2 arm64 2.4.100-4 [15.6 kB] Get:379 http://ftpmaster.internal/ubuntu focal/main arm64 libdrm-radeon1 arm64 2.4.100-4 [18.7 kB] Get:380 http://ftpmaster.internal/ubuntu focal/main arm64 libepoxy0 arm64 1.5.4-1 [200 kB] Get:381 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libglvnd0 arm64 1.3.0-7 [42.7 kB] Get:382 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libglapi-mesa arm64 19.3.2-1ubuntu1 [35.5 kB] Get:383 http://ftpmaster.internal/ubuntu focal/main arm64 libx11-xcb1 arm64 2:1.6.8-1 [9244 B] Get:384 http://ftpmaster.internal/ubuntu focal/main arm64 libxcb-dri2-0 arm64 1.13.1-3build1 [6864 B] Get:385 http://ftpmaster.internal/ubuntu focal/main arm64 libxcb-dri3-0 arm64 1.13.1-3build1 [6564 B] Get:386 http://ftpmaster.internal/ubuntu focal/main arm64 libxcb-glx0 arm64 1.13.1-3build1 [22.4 kB] Get:387 http://ftpmaster.internal/ubuntu focal/main arm64 libxcb-present0 arm64 1.13.1-3build1 [5496 B] Get:388 http://ftpmaster.internal/ubuntu focal/main arm64 libxcb-sync1 arm64 1.13.1-3build1 [8848 B] Get:389 http://ftpmaster.internal/ubuntu focal/main arm64 libxdamage1 arm64 1:1.1.5-1 [6896 B] Get:390 http://ftpmaster.internal/ubuntu focal/main arm64 libxfixes3 arm64 1:5.0.3-1 [9844 B] Get:391 http://ftpmaster.internal/ubuntu focal/main arm64 libxshmfence1 arm64 1.3-1 [4868 B] Get:392 http://ftpmaster.internal/ubuntu focal/main arm64 libxxf86vm1 arm64 1:1.1.4-1build1 [9908 B] Get:393 http://ftpmaster.internal/ubuntu focal/main arm64 libsensors-config all 1:3.6.0-2ubuntu1 [6092 B] Get:394 http://ftpmaster.internal/ubuntu focal/main arm64 libsensors5 arm64 1:3.6.0-2ubuntu1 [26.1 kB] Get:395 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libgl1-mesa-dri arm64 19.3.2-1ubuntu1 [6008 kB] Get:396 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libglx-mesa0 arm64 19.3.2-1ubuntu1 [140 kB] Get:397 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libglx0 arm64 1.3.0-7 [29.4 kB] Get:398 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libgl1 arm64 1.3.0-7 [88.7 kB] Get:399 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libglx-dev arm64 1.3.0-7 [14.0 kB] Get:400 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libgl-dev arm64 1.3.0-7 [97.8 kB] Get:401 http://ftpmaster.internal/ubuntu focal/main arm64 libglu1-mesa arm64 9.0.1-1 [146 kB] Get:402 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libgl1-mesa-dev arm64 19.3.2-1ubuntu1 [6520 B] Get:403 http://ftpmaster.internal/ubuntu focal/main arm64 libglu1-mesa-dev arm64 9.0.1-1 [185 kB] Get:404 http://ftpmaster.internal/ubuntu focal/main arm64 libjson-glib-1.0-common all 1.4.4-2ubuntu1 [3508 B] Get:405 http://ftpmaster.internal/ubuntu focal/main arm64 libjson-glib-1.0-0 arm64 1.4.4-2ubuntu1 [54.0 kB] Get:406 http://ftpmaster.internal/ubuntu focal/main arm64 libsoup2.4-1 arm64 2.68.2-2build2 [242 kB] Get:407 http://ftpmaster.internal/ubuntu focal/main arm64 libsoup-gnome2.4-1 arm64 2.68.2-2build2 [5928 B] Get:408 http://ftpmaster.internal/ubuntu focal/main arm64 librest-0.7-0 arm64 0.8.1-1 [30.2 kB] Get:409 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libwayland-client0 arm64 1.17.0-1build1 [23.1 kB] Get:410 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libwayland-cursor0 arm64 1.17.0-1build1 [9964 B] Get:411 http://ftpmaster.internal/ubuntu focal-proposed/main arm64 libwayland-egl1 arm64 1.17.0-1build1 [5640 B] Get:412 http://ftpmaster.internal/ubuntu focal/main arm64 libxcomposite1 arm64 1:0.4.5-0ubuntu1 [6900 B] Get:413 http://ftpmaster.internal/ubuntu focal/main arm64 libxcursor1 arm64 1:1.2.0-2 [19.2 kB] Get:414 http://ftpmaster.internal/ubuntu focal/main arm64 libxi6 arm64 2:1.7.10-0ubuntu1 [28.2 kB] Get:415 http://ftpmaster.internal/ubuntu focal/main arm64 libxinerama1 arm64 2:1.1.4-2 [6872 B] Get:416 http://ftpmaster.internal/ubuntu focal/main arm64 libxkbcommon0 arm64 0.9.1-1 [92.0 kB] Get:417 http://ftpmaster.internal/ubuntu focal/main arm64 libxrandr2 arm64 2:1.5.2-0ubuntu1 [17.7 kB] Get:418 http://ftpmaster.internal/ubuntu focal/main arm64 libgtk-3-common all 3.24.13-1ubuntu1 [234 kB] Get:419 http://ftpmaster.internal/ubuntu focal/main arm64 libgtk-3-0 arm64 3.24.13-1ubuntu1 [2361 kB] Get:420 http://ftpmaster.internal/ubuntu focal/main arm64 libharfbuzz-icu0 arm64 2.6.4-1ubuntu1 [5460 B] Get:421 http://ftpmaster.internal/ubuntu focal/main arm64 libkpathsea6 arm64 2019.20190605.51237-3 [54.1 kB] Get:422 http://ftpmaster.internal/ubuntu focal/main arm64 libnotify4 arm64 0.7.8-1ubuntu4 [16.7 kB] Get:423 http://ftpmaster.internal/ubuntu focal/main arm64 libpaper-utils arm64 1.1.28 [8328 B] Get:424 http://ftpmaster.internal/ubuntu focal/main arm64 libperl-dev arm64 5.30.0-9 [886 kB] Get:425 http://ftpmaster.internal/ubuntu focal/main arm64 libptexenc1 arm64 2019.20190605.51237-3 [36.6 kB] Get:426 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libschroedinger-maeparser1 arm64 1.2.2-1 [79.0 kB] Get:427 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libschroedinger-maeparser-dev arm64 1.2.2-1 [11.9 kB] Get:428 http://ftpmaster.internal/ubuntu focal/main arm64 libsynctex2 arm64 2019.20190605.51237-3 [52.0 kB] Get:429 http://ftpmaster.internal/ubuntu focal/universe arm64 libteckit0 arm64 2.5.8+ds2-5ubuntu1 [284 kB] Get:430 http://ftpmaster.internal/ubuntu focal/main arm64 libtexlua53 arm64 2019.20190605.51237-3 [97.8 kB] Get:431 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libwxbase3.0-0v5 arm64 3.0.4+dfsg-15 [843 kB] Get:432 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 wx3.0-headers all 3.0.4+dfsg-15 [1019 kB] Get:433 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libwxbase3.0-dev arm64 3.0.4+dfsg-15 [29.4 kB] Get:434 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libwxgtk3.0-gtk3-0v5 arm64 3.0.4+dfsg-15 [3796 kB] Get:435 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 wx-common arm64 3.0.4+dfsg-15 [65.3 kB] Get:436 http://ftpmaster.internal/ubuntu focal-proposed/universe arm64 libwxgtk3.0-gtk3-dev arm64 3.0.4+dfsg-15 [29.6 kB] Get:437 http://ftpmaster.internal/ubuntu focal/main arm64 libxml2-dev arm64 2.9.4+dfsg1-8ubuntu3 [701 kB] Get:438 http://ftpmaster.internal/ubuntu focal/universe arm64 libzzip-0-13 arm64 0.13.62-3.2 [25.7 kB] Get:439 http://ftpmaster.internal/ubuntu focal/main arm64 python3-setuptools all 44.0.0-1 [257 kB] Get:440 http://ftpmaster.internal/ubuntu focal/universe arm64 rapidjson-dev all 1.1.0+dfsg2-5 [95.0 kB] Get:441 http://ftpmaster.internal/ubuntu focal/universe arm64 swig3.0 arm64 3.0.12-2.2 [1024 kB] Get:442 http://ftpmaster.internal/ubuntu focal/universe arm64 swig arm64 3.0.12-2.2 [6464 B] Get:443 http://ftpmaster.internal/ubuntu focal/main arm64 t1utils arm64 1.41-3 [53.5 kB] Get:444 http://ftpmaster.internal/ubuntu focal/universe arm64 texlive-binaries arm64 2019.20190605.51237-3 [6848 kB] Get:445 http://ftpmaster.internal/ubuntu focal/main arm64 xdg-utils all 1.1.3-1ubuntu2 [60.5 kB] Get:446 http://ftpmaster.internal/ubuntu focal/universe arm64 texlive-base all 2019.20191208-4ubuntu2 [20.5 MB] Get:447 http://ftpmaster.internal/ubuntu focal/universe arm64 texlive-latex-base all 2019.20191208-4ubuntu2 [849 kB] Get:448 http://ftpmaster.internal/ubuntu focal/universe arm64 libeigen3-dev all 3.3.7-1 [814 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 221 MB in 13s (16.7 MB/s) Selecting previously unselected package libpython3.7-minimal:arm64. (Reading database ... 14657 files and directories currently installed.) Preparing to unpack .../libpython3.7-minimal_3.7.6-1ubuntu2_arm64.deb ... Unpacking libpython3.7-minimal:arm64 (3.7.6-1ubuntu2) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.2.9-1_arm64.deb ... Unpacking libexpat1:arm64 (2.2.9-1) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../python3.7-minimal_3.7.6-1ubuntu2_arm64.deb ... Unpacking python3.7-minimal (3.7.6-1ubuntu2) ... Setting up libpython3.7-minimal:arm64 (3.7.6-1ubuntu2) ... Setting up libexpat1:arm64 (2.2.9-1) ... Setting up python3.7-minimal (3.7.6-1ubuntu2) ... Selecting previously unselected package python3-minimal. (Reading database ... 14906 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.7.5-1ubuntu1_arm64.deb ... Unpacking python3-minimal (3.7.5-1ubuntu1) ... Selecting previously unselected package mime-support. 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Unpacking libpython2.7-stdlib:arm64 (2.7.17-1ubuntu5) ... Selecting previously unselected package python2.7. Preparing to unpack .../12-python2.7_2.7.17-1ubuntu5_arm64.deb ... Unpacking python2.7 (2.7.17-1ubuntu5) ... Selecting previously unselected package libpython2-stdlib:arm64. Preparing to unpack .../13-libpython2-stdlib_2.7.17-2ubuntu2_arm64.deb ... Unpacking libpython2-stdlib:arm64 (2.7.17-2ubuntu2) ... Setting up libpython2.7-minimal:arm64 (2.7.17-1ubuntu5) ... Setting up python2.7-minimal (2.7.17-1ubuntu5) ... Setting up python2-minimal (2.7.17-2ubuntu2) ... Selecting previously unselected package python2. (Reading database ... 17229 files and directories currently installed.) Preparing to unpack .../000-python2_2.7.17-2ubuntu2_arm64.deb ... Unpacking python2 (2.7.17-2ubuntu2) ... Selecting previously unselected package ucf. Preparing to unpack .../001-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... 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Setting up dbus-user-session (1.12.16-2ubuntu2) ... Setting up libxdmcp-dev:arm64 (1:1.1.3-0ubuntu1) ... Setting up libboost-date-time1.67-dev:arm64 (1.67.0-17ubuntu4) ... Setting up libwind0-heimdal:arm64 (7.7.0+dfsg-1) ... Setting up libboost-chrono1.67-dev:arm64 (1.67.0-17ubuntu4) ... Setting up libxml2-dev:arm64 (2.9.4+dfsg1-8ubuntu3) ... Setting up libptexenc1:arm64 (2019.20190605.51237-3) ... Setting up libxcb-sync1:arm64 (1.13.1-3build1) ... Setting up x11proto-core-dev (2018.4-4) ... Setting up shared-mime-info (1.10-1) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libevent-dev (2.1.11-stable-1) ... Setting up libhwloc15:arm64 (2.1.0+dfsg-3) ... Setting up libeigen3-dev (3.3.7-1) ... Setting up libgssapi-krb5-2:arm64 (1.17-6ubuntu3) ... Setting up libcroco3:arm64 (0.6.13-1) ... 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Setting up libpython3-stdlib:arm64 (3.7.5-1ubuntu1) ... Setting up libdrm-amdgpu1:arm64 (2.4.100-4) ... Setting up libschroedinger-maeparser-dev:arm64 (1.2.2-1) ... Setting up python2.7-dev (2.7.17-1ubuntu5) ... Setting up automake (1:1.16.1-4ubuntu4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libxcb-dri3-0:arm64 (1.13.1-3build1) ... Setting up libboost-graph-dev:arm64 (1.67.0.2ubuntu1) ... Setting up python3.7 (3.7.6-1ubuntu2) ... Setting up libibverbs1:arm64 (27.0-2) ... Setting up fontconfig (2.13.1-2ubuntu2) ... Regenerating fonts cache... done. Setting up libdrm-nouveau2:arm64 (2.4.100-4) ... Setting up gettext (0.19.8.1-10) ... Setting up libxdamage1:arm64 (1:1.1.5-1) ... Setting up libpython3-dev:arm64 (3.7.5-1ubuntu1) ... Setting up libxcb1-dev:arm64 (1.13.1-3build1) ... Setting up python2-dev (2.7.17-2ubuntu2) ... Setting up libxpm4:arm64 (1:3.5.12-1) ... 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Setting up python3 (3.7.5-1ubuntu1) ... Setting up libboost-context-dev:arm64 (1.67.0.2ubuntu1) ... Setting up libatspi2.0-0:arm64 (2.34.0-3ubuntu2) ... Setting up libboost-iostreams-dev:arm64 (1.67.0.2ubuntu1) ... Setting up libboost-type-erasure1.67-dev:arm64 (1.67.0-17ubuntu4) ... Setting up man-db (2.9.0-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up python3.7-dev (3.7.6-1ubuntu2) ... Setting up libcairo2:arm64 (1.16.0-4ubuntu1) ... Setting up libboost-type-erasure-dev:arm64 (1.67.0.2ubuntu1) ... Setting up libfreetype6-dev:arm64 (2.10.1-2) ... Setting up libxxf86vm1:arm64 (1:1.1.4-1build1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxnvctrl0:arm64 (435.21-0ubuntu2) ... Setting up libatk-bridge2.0-0:arm64 (2.34.1-2ubuntu1) ... Setting up libnl-route-3-dev:arm64 (3.4.0-1) ... Setting up libxcb-shm0-dev:arm64 (1.13.1-3build1) ... Setting up libltdl-dev:arm64 (2.4.6-11) ... Setting up doxygen (1.8.16-2) ... Setting up libboost-fiber1.67.0:arm64 (1.67.0-17ubuntu4) ... Setting up libxfixes3:arm64 (1:5.0.3-1) ... Setting up libboost-log1.67.0 (1.67.0-17ubuntu4) ... Setting up libgdk-pixbuf2.0-0:arm64 (2.40.0+dfsg-2) ... Setting up libxinerama1:arm64 (2:1.1.4-2) ... Setting up libboost-numpy-dev (1.67.0.2ubuntu1) ... Setting up libgd3:arm64 (2.2.5-5.2) ... Setting up libxrandr2:arm64 (2:1.5.2-0ubuntu1) ... Setting up libxcb-render0-dev:arm64 (1.13.1-3build1) ... Setting up libxt6:arm64 (1:1.1.5-1) ... Setting up libxext-dev:arm64 (2:1.3.4-0ubuntu1) ... Setting up libcups2:arm64 (2.3.1-1ubuntu1) ... Setting up libboost-timer1.67-dev:arm64 (1.67.0-17ubuntu4) ... Setting up libboost-stacktrace-dev:arm64 (1.67.0.2ubuntu1) ... Setting up libboost-fiber1.67-dev:arm64 (1.67.0-17ubuntu4) ... Setting up libcairo-gobject2:arm64 (1.16.0-4ubuntu1) ... Setting up libhwloc-dev:arm64 (2.1.0+dfsg-3) ... Setting up libboost-coroutine-dev:arm64 (1.67.0.2ubuntu1) ... Setting up libpangoft2-1.0-0:arm64 (1.44.7-1ubuntu1) ... Setting up python3-lib2to3 (3.8.0-1) ... Setting up libxrender-dev:arm64 (1:0.9.10-1) ... Setting up libboost-timer-dev:arm64 (1.67.0.2ubuntu1) ... Setting up libboost-filesystem-dev:arm64 (1.67.0.2ubuntu1) ... Setting up libboost-thread-dev:arm64 (1.67.0.2ubuntu1) ... Setting up libpangocairo-1.0-0:arm64 (1.44.7-1ubuntu1) ... Setting up libboost-fiber-dev:arm64 (1.67.0.2ubuntu1) ... Setting up libkrb5-26-heimdal:arm64 (7.7.0+dfsg-1) ... Setting up python3-pkg-resources (44.0.0-1) ... Setting up python3-distutils (3.8.0-1) ... Setting up dh-python (4.20191017ubuntu4) ... Setting up libcairo-script-interpreter2:arm64 (1.16.0-4ubuntu1) ... Setting up libglib2.0-dev-bin (2.63.3-3) ... Setting up libboost-wave1.67-dev:arm64 (1.67.0-17ubuntu4) ... Setting up gtk-update-icon-cache (3.24.13-1ubuntu1) ... Setting up libxmu6:arm64 (2:1.1.3-0ubuntu1) ... Setting up libfontconfig1-dev:arm64 (2.13.1-2ubuntu2) ... Setting up libglx-mesa0:arm64 (19.3.2-1ubuntu1) ... Setting up python3-setuptools (44.0.0-1) ... Setting up libgs9:arm64 (9.27~dfsg+0-0ubuntu4) ... Setting up libxi6:arm64 (2:1.7.10-0ubuntu1) ... Setting up libglx0:arm64 (1.3.0-7) ... Setting up dconf-gsettings-backend:arm64 (0.34.0-2) ... Setting up po-debconf (1.0.21) ... Setting up libxcursor1:arm64 (1:1.2.0-2) ... Setting up libboost-wave-dev:arm64 (1.67.0.2ubuntu1) ... Setting up libxaw7:arm64 (2:1.0.13-1) ... Setting up libibverbs-dev:arm64 (27.0-2) ... Setting up ghostscript (9.27~dfsg+0-0ubuntu4) ... Setting up libboost-log1.67-dev (1.67.0-17ubuntu4) ... Setting up libhwloc-plugins:arm64 (2.1.0+dfsg-3) ... Setting up libheimntlm0-heimdal:arm64 (7.7.0+dfsg-1) ... Setting up librsvg2-2:arm64 (2.46.4-1ubuntu1) ... Setting up libgl1:arm64 (1.3.0-7) ... Setting up libglib2.0-dev:arm64 (2.63.3-3) ... Setting up libgssapi3-heimdal:arm64 (7.7.0+dfsg-1) ... Setting up libnotify4:arm64 (0.7.8-1ubuntu4) ... Setting up python3-dev (3.7.5-1ubuntu1) ... Setting up libgvc6 (2.42.2-3) ... Setting up librsvg2-common:arm64 (2.46.4-1ubuntu1) ... Setting up texlive-binaries (2019.20190605.51237-3) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libglx-dev:arm64 (1.3.0-7) ... Setting up libcairo2-dev:arm64 (1.16.0-4ubuntu1) ... Setting up libglu1-mesa:arm64 (9.0.1-1) ... Setting up libboost-python1.67-dev (1.67.0-17ubuntu4) ... Setting up texlive-base (2019.20191208-4ubuntu2) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex Setting up libboost-log-dev (1.67.0.2ubuntu1) ... Setting up libgl-dev:arm64 (1.3.0-7) ... Setting up libgtk-3-common (3.24.13-1ubuntu1) ... Setting up gsettings-desktop-schemas (3.34.0-1ubuntu1) ... Setting up graphviz (2.42.2-3) ... Setting up libpmix2:arm64 (3.1.4-1build1) ... Setting up libopenmpi3:arm64 (4.0.2-5) ... Setting up libboost-mpi1.67.0 (1.67.0-17ubuntu4) ... Setting up libldap-2.4-2:arm64 (2.4.48+dfsg-1ubuntu4) ... Setting up libboost-python-dev (1.67.0.2ubuntu1) ... Setting up libboost-graph-parallel1.67.0 (1.67.0-17ubuntu4) ... Setting up texlive-latex-base (2019.20191208-4ubuntu2) ... Setting up libglu1-mesa-dev:arm64 (9.0.1-1) ... Setting up libgl1-mesa-dev:arm64 (19.3.2-1ubuntu1) ... Setting up libcurl4:arm64 (7.66.0-1ubuntu1) ... Setting up glib-networking:arm64 (2.63.2-1) ... Setting up openmpi-bin (4.0.2-5) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libsoup2.4-1:arm64 (2.68.2-2build2) ... Setting up mpi-default-bin (1.13) ... Setting up libboost-graph-parallel1.67-dev (1.67.0-17ubuntu4) ... Setting up libboost-graph-parallel-dev (1.67.0.2ubuntu1) ... Setting up cmake (3.15.4-1ubuntu3) ... Setting up libopenmpi-dev:arm64 (4.0.2-5) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode Setting up libsoup-gnome2.4-1:arm64 (2.68.2-2build2) ... Setting up librest-0.7-0:arm64 (0.8.1-1) ... Setting up libboost-mpi-python1.67.0 (1.67.0-17ubuntu4) ... Setting up mpi-default-dev (1.13) ... Setting up libboost-mpi1.67-dev (1.67.0-17ubuntu4) ... Setting up libboost-mpi-dev (1.67.0.2ubuntu1) ... Setting up libboost-mpi-python1.67-dev (1.67.0-17ubuntu4) ... Setting up libboost-mpi-python-dev (1.67.0.2ubuntu1) ... Setting up libboost-all-dev (1.67.0.2ubuntu1) ... Setting up dh-autoreconf (19) ... Setting up adwaita-icon-theme (3.34.0-1ubuntu1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libgtk-3-0:arm64 (3.24.13-1ubuntu1) ... Setting up debhelper (12.7.3ubuntu1) ... Setting up libwxgtk3.0-gtk3-0v5:arm64 (3.0.4+dfsg-15) ... Setting up humanity-icon-theme (0.6.15) ... Setting up ubuntu-mono (19.04-0ubuntu2) ... Setting up libwxgtk3.0-gtk3-dev:arm64 (3.0.4+dfsg-15) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/wx/config/gtk3-unicode-3.0 to provide /usr/bin/wx-config (wx-config) in auto mode Setting up sbuild-build-depends-openbabel-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.30-0ubuntu3) ... Processing triggers for systemd (244.1-0ubuntu2) ... Processing triggers for libgdk-pixbuf2.0-0:arm64 (2.40.0+dfsg-2) ... Processing triggers for tex-common (6.13) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-171-generic arm64 (aarch64) Toolchain package versions: binutils_2.33.90.20200122-1ubuntu2 dpkg-dev_1.19.7ubuntu2 g++-9_9.2.1-24ubuntu1 gcc-8_8.3.0-26ubuntu1 gcc-9_9.2.1-24ubuntu1 libc6-dev_2.30-0ubuntu3 libstdc++-9-dev_9.2.1-24ubuntu1 libstdc++6_9.2.1-24ubuntu1 linux-libc-dev_5.4.0-12.15 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 adwaita-icon-theme_3.34.0-1ubuntu1 apt_1.9.7 autoconf_2.69-11.1 automake_1:1.16.1-4ubuntu4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11ubuntu2 base-passwd_3.5.47 bash_5.0-5ubuntu1 binutils_2.33.90.20200122-1ubuntu2 binutils-aarch64-linux-gnu_2.33.90.20200122-1ubuntu2 binutils-common_2.33.90.20200122-1ubuntu2 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu5 build-essential_12.8ubuntu1 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libxcb-render0_1.13.1-3build1 libxcb-render0-dev_1.13.1-3build1 libxcb-shm0_1.13.1-3build1 libxcb-shm0-dev_1.13.1-3build1 libxcb-sync1_1.13.1-3build1 libxcb1_1.13.1-3build1 libxcb1-dev_1.13.1-3build1 libxcomposite1_1:0.4.5-0ubuntu1 libxcursor1_1:1.2.0-2 libxdamage1_1:1.1.5-1 libxdmcp-dev_1:1.1.3-0ubuntu1 libxdmcp6_1:1.1.3-0ubuntu1 libxext-dev_2:1.3.4-0ubuntu1 libxext6_2:1.3.4-0ubuntu1 libxfixes3_1:5.0.3-1 libxi6_2:1.7.10-0ubuntu1 libxinerama1_2:1.1.4-2 libxkbcommon0_0.9.1-1 libxml2_2.9.4+dfsg1-8ubuntu3 libxml2-dev_2.9.4+dfsg1-8ubuntu3 libxmu6_2:1.1.3-0ubuntu1 libxnvctrl0_435.21-0ubuntu2 libxpm4_1:3.5.12-1 libxrandr2_2:1.5.2-0ubuntu1 libxrender-dev_1:0.9.10-1 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxt6_1:1.1.5-1 libxxf86vm1_1:1.1.4-1build1 libzstd1_1.4.4+dfsg-1 libzzip-0-13_0.13.62-3.2 linux-libc-dev_5.4.0-12.15 lockfile-progs_0.1.18 login_1:4.8-1ubuntu1 logsave_1.45.3-4ubuntu2 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.3-17ubuntu3 mime-support_3.64ubuntu1 mount_2.34-0.1ubuntu5 mpi-default-bin_1.13 mpi-default-dev_1.13 ncurses-base_6.1+20191019-1ubuntu1 ncurses-bin_6.1+20191019-1ubuntu1 ocl-icd-libopencl1_2.2.11-1ubuntu1 openmpi-bin_4.0.2-5 openmpi-common_4.0.2-5 openssh-client_1:8.1p1-5 openssl_1.1.1d-2ubuntu3 optipng_0.7.7-1 passwd_1:4.8-1ubuntu1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkg-config_0.29.1-0ubuntu3 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 poppler-data_0.4.9-2 procps_2:3.3.15-2ubuntu3 python2_2.7.17-2ubuntu2 python2-dev_2.7.17-2ubuntu2 python2-minimal_2.7.17-2ubuntu2 python2.7_2.7.17-1ubuntu5 python2.7-dev_2.7.17-1ubuntu5 python2.7-minimal_2.7.17-1ubuntu5 python3_3.7.5-1ubuntu1 python3-dev_3.7.5-1ubuntu1 python3-distutils_3.8.0-1 python3-lib2to3_3.8.0-1 python3-minimal_3.7.5-1ubuntu1 python3-pkg-resources_44.0.0-1 python3-setuptools_44.0.0-1 python3.7_3.7.6-1ubuntu2 python3.7-dev_3.7.6-1ubuntu2 python3.7-minimal_3.7.6-1ubuntu2 rapidjson-dev_1.1.0+dfsg2-5 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-openbabel-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 shared-mime-info_1.10-1 swig_3.0.12-2.2 swig3.0_3.0.12-2.2 systemd_244.1-0ubuntu2 systemd-sysv_244.1-0ubuntu2 sysvinit-utils_2.96-1ubuntu1 t1utils_1.41-3 tar_1.30+dfsg-6 tex-common_6.13 texlive-base_2019.20191208-4ubuntu2 texlive-binaries_2019.20190605.51237-3 texlive-latex-base_2019.20191208-4ubuntu2 tzdata_2019c-3 ubuntu-keyring_2018.09.18.1 ubuntu-mono_19.04-0ubuntu2 ucf_3.0038+nmu1 util-linux_2.34-0.1ubuntu5 uuid-dev_2.34-0.1ubuntu5 wx-common_3.0.4+dfsg-15 wx3.0-headers_3.0.4+dfsg-15 x11-common_1:7.7+19ubuntu13 x11proto-core-dev_2018.4-4 x11proto-dev_2018.4-4 x11proto-xext-dev_2018.4-4 xdg-utils_1.1.3-1ubuntu2 xkb-data_2.26-2ubuntu3 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1build1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu3 zlib1g-dev_1:1.2.11.dfsg-1ubuntu3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Wed Jan 22 16:01:55 2020 UTC gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./openbabel_3.0.0+dfsg-2.dsc dpkg-source: info: extracting openbabel in openbabel-3.0.0+dfsg dpkg-source: info: unpacking openbabel_3.0.0+dfsg.orig.tar.xz dpkg-source: info: unpacking openbabel_3.0.0+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying libinchi_static.patch dpkg-source: info: applying remove_link_top.diff dpkg-source: info: applying use-system-maeparser.patch dpkg-source: info: applying 3f7a07f7e40afa3fcce3bf9014f3c3a8ceca0da5.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-18599927 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-18599927 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-18599927 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package openbabel dpkg-buildpackage: info: source version 3.0.0+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --with=python3 --builddirectory=/<>/openbabel-3.0.0+dfsg/builddir dh_auto_clean -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_autoreconf_clean -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_clean -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir debian/rules binary-arch dh binary-arch --with=python3 --builddirectory=/<>/openbabel-3.0.0+dfsg/builddir dh_update_autotools_config -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_autoreconf -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/openbabel-3.0.0+dfsg' dh_auto_configure -- -DCMAKE_BUILD_TYPE=None -DPYTHON_BINDINGS=ON -DPYTHON_EXECUTABLE=/usr/bin/python3 -DPERL_BINDINGS=ON -DOBPERL_INSTALLDIRS=vendor -DRUN_SWIG=ON -DCMAKE_SKIP_RPATH=ON -DBUILD_GUI=ON -DENABLE_OPENMP=ON -DBUILD_DOCS=ON cd builddir && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DCMAKE_BUILD_TYPE=None -DPYTHON_BINDINGS=ON -DPYTHON_EXECUTABLE=/usr/bin/python3 -DPERL_BINDINGS=ON -DOBPERL_INSTALLDIRS=vendor -DRUN_SWIG=ON -DCMAKE_SKIP_RPATH=ON -DBUILD_GUI=ON -DENABLE_OPENMP=ON -DBUILD_DOCS=ON .. -- The C compiler identification is GNU 9.2.1 -- The CXX compiler identification is GNU 9.2.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:12 (cmake_policy): The OLD behavior for policy CMP0042 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. -- Performing Test COMPILER_SUPPORTS_CXX11 -- Performing Test COMPILER_SUPPORTS_CXX11 - Success -- Performing Test COMPILER_SUPPORTS_CXX0X -- Performing Test COMPILER_SUPPORTS_CXX0X - Success -- Using included inchi library. -- Found LibXml2: /usr/lib/aarch64-linux-gnu/libxml2.so (found version "2.9.4") -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.2.11") -- Found wxWidgets: -L/usr/lib/aarch64-linux-gnu;-pthread;;;-lwx_baseu-3.0;-lwx_gtk3u_core-3.0;-lwx_gtk3u_adv-3.0 (found version "3.0.4") -- Looking for conio.h -- Looking for conio.h - not found -- Looking for sys/time.h -- Looking for sys/time.h - found -- Looking for time.h -- Looking for time.h - found -- Looking for strings.h -- Looking for strings.h - found -- Looking for rpc/xdr.h -- Looking for rpc/xdr.h - found -- Looking for regex.h -- Looking for regex.h - found -- Looking for C++ include sstream -- Looking for C++ include sstream - found -- Looking for rint -- Looking for rint - not found -- Looking for snprintf -- Looking for snprintf - found -- Looking for sranddev -- Looking for sranddev - not found -- Looking for strcasecmp -- Looking for strcasecmp - found -- Looking for strncasecmp -- Looking for strncasecmp - found -- Looking for dlopen in dl -- Looking for dlopen in dl - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of clock_t -- Check size of clock_t - done -- Performing Test SCANDIR_NEEDS_CONST -- Performing Test SCANDIR_NEEDS_CONST - Failed -- Performing Test HAVE_GCC_VISIBILITY -- Performing Test HAVE_GCC_VISIBILITY - Success -- Checking available shared pointer... -- Performing Test HAVE_STD_SHARED_PTR -- Performing Test HAVE_STD_SHARED_PTR - Success -- Performing Test HAVE_STD_TR1_SHARED_PTR -- Performing Test HAVE_STD_TR1_SHARED_PTR - Failed -- Performing Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER -- Performing Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER - Success -- Use std::shared_ptr in memory -- Found Boost: /usr/include (found version "1.67.0") found components: program_options iostreams regex -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") -- Found Boost: /usr/include (found version "1.67.0") -- Maestro formats will be supported. Using MaeParser 1.1 at -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.1") -- Found RapidJSON: /usr/include (found suitable version "1.1.0", minimum required is "1.1.0") -- JSON formats will be supported. Using RapidJSON 1.1.0 at /usr/include -- Checking for module 'cairo' -- Found cairo, version 1.16.0 -- Found Cairo: /usr/lib/aarch64-linux-gnu/libcairo.so -- Cairo found. PNG output will be supported. -- Found Doxygen: /usr/bin/doxygen (found version "1.8.16") found components: doxygen dot -- Found Boost: /usr/include (found suitable version "1.67.0", minimum required is "1.45.0") found components: system -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost: /usr/include (found version "1.67.0") found components: program_options iostreams regex -- Looking for getopt -- Looking for getopt - found -- Attempting to build the GUI -- wxWidgets found => GUI will be built -- Found PythonInterp: /usr/bin/python3 (found version "3.7.6") -- Found SWIG: /usr/bin/swig3.0 (found version "3.0.12") -- Found SWIG: /usr/bin/swig3.0 (found suitable version "3.0.12", minimum required is "2.0") -- Found PythonLibs: /usr/lib/aarch64-linux-gnu/libpython3.7m.so (found version "3.7.6") -- Python bindings will be compiled -- Found Perl: /usr/bin/perl (found version "5.30.0") -- Found PerlLibs: /usr/lib/aarch64-linux-gnu/libperl.so.5.30 (found version "5.30.0") -- Perl bindings will be compiled -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR OBPERL_INSTALLDIRS -- Build files have been written to: /<>/openbabel-3.0.0+dfsg/builddir sed -i -e "s@##DEB_HOST_MULTIARCH##@aarch64-linux-gnu@g" \ debian/libopenbabel-dev.install \ debian/libopenbabel6.install make[1]: Leaving directory '/<>/openbabel-3.0.0+dfsg' debian/rules override_dh_auto_build make[1]: Entering directory '/<>/openbabel-3.0.0+dfsg' dh_auto_build cd builddir && make -j4 "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' /usr/bin/cmake -S/<>/openbabel-3.0.0+dfsg -B/<>/openbabel-3.0.0+dfsg/builddir --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/openbabel-3.0.0+dfsg/builddir/CMakeFiles /<>/openbabel-3.0.0+dfsg/builddir/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/depend make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats/libinchi /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi/CMakeFiles/inchi.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src /<>/openbabel-3.0.0+dfsg/builddir/src/CMakeFiles/openbabel.dir/DependInfo.cmake --color= Scanning dependencies of target inchi make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichi_bns.c.o [ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichi_io.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichi_io.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichi_io.c [ 0%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichican2.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichi_bns.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichi_bns.c cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichican2.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichican2.c Scanning dependencies of target openbabel make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 0%] Building CXX object src/CMakeFiles/openbabel.dir/alias.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/alias.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/alias.cpp [ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichicano.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichicano.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichicano.c [ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichicans.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichicans.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichicans.c [ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiisot.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichiisot.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichiisot.c [ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichilnct.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichilnct.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichilnct.c [ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimak2.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichimak2.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichimak2.c [ 1%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimake.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichimake.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichimake.c [ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap1.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichimap1.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichimap1.c [ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap2.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichimap2.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichimap2.c [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/atom.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/atom.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/atom.cpp [ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichimap4.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichimap4.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichimap4.c [ 2%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichinorm.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichinorm.c.o -c 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/<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichiparm.c [ 3%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichiprt1.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichiprt1.c.o -c 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-DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichirvr3.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichirvr3.c [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/bond.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/bond.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/bond.cpp [ 5%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr4.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichirvr4.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichirvr4.c [ 5%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr5.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichirvr5.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichirvr5.c [ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr6.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichirvr6.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichirvr6.c [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/bondtyper.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/bondtyper.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/bondtyper.cpp [ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichirvr7.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichirvr7.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichirvr7.c [ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichisort.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichisort.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichisort.c [ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichister.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichister.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichister.c [ 6%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ichitaut.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ichitaut.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ichitaut.c [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/builder.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/builder.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/builder.cpp [ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ikey_base26.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ikey_base26.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ikey_base26.c [ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/ikey_dll.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/ikey_dll.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/ikey_dll.c [ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/inchi_dll.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/inchi_dll.c [ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_a.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/inchi_dll_a.c.o -c /<>/openbabel-3.0.0+dfsg/src/formats/libinchi/inchi_dll_a.c [ 7%] Building C object src/formats/libinchi/CMakeFiles/inchi.dir/inchi_dll_a2.c.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi && /usr/bin/cc -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC -fPIC -w -o CMakeFiles/inchi.dir/inchi_dll_a2.c.o -c 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/<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/canon.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/canon.cpp [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/chains.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON 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/usr/bin/ar qc libinchi.a CMakeFiles/inchi.dir/ichi_bns.c.o CMakeFiles/inchi.dir/ichi_io.c.o CMakeFiles/inchi.dir/ichican2.c.o CMakeFiles/inchi.dir/ichicano.c.o CMakeFiles/inchi.dir/ichicans.c.o CMakeFiles/inchi.dir/ichiisot.c.o CMakeFiles/inchi.dir/ichilnct.c.o CMakeFiles/inchi.dir/ichimak2.c.o CMakeFiles/inchi.dir/ichimake.c.o CMakeFiles/inchi.dir/ichimap1.c.o CMakeFiles/inchi.dir/ichimap2.c.o CMakeFiles/inchi.dir/ichimap4.c.o CMakeFiles/inchi.dir/ichinorm.c.o CMakeFiles/inchi.dir/ichiparm.c.o CMakeFiles/inchi.dir/ichiprt1.c.o CMakeFiles/inchi.dir/ichiprt2.c.o CMakeFiles/inchi.dir/ichiprt3.c.o CMakeFiles/inchi.dir/ichiqueu.c.o CMakeFiles/inchi.dir/ichiread.c.o CMakeFiles/inchi.dir/ichiring.c.o CMakeFiles/inchi.dir/ichirvr1.c.o CMakeFiles/inchi.dir/ichirvr2.c.o CMakeFiles/inchi.dir/ichirvr3.c.o CMakeFiles/inchi.dir/ichirvr4.c.o CMakeFiles/inchi.dir/ichirvr5.c.o CMakeFiles/inchi.dir/ichirvr6.c.o CMakeFiles/inchi.dir/ichirvr7.c.o CMakeFiles/inchi.dir/ichisort.c.o 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/usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/graphsym.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/graphsym.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/grid.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/grid.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/grid.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/griddata.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/griddata.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/griddata.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/isomorphism.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/isomorphism.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/isomorphism.cpp [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/kekulize.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/kekulize.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/kekulize.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/locale.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/locale.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/locale.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/matrix.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 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-D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/mcdlutil.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/mcdlutil.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/molchrg.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/molchrg.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/molchrg.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/mol.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/mol.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/mol.cpp [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/obconversion.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/obconversion.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/obconversion.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/oberror.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security 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object src/CMakeFiles/openbabel.dir/obutil.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/obutil.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/obutil.cpp [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/op.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/op.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/op.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/parsmart.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/parsmart.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/parsmart.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/patty.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/patty.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/patty.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/phmodel.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/phmodel.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/phmodel.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/plugin.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/plugin.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/plugin.cpp [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/pointgroup.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 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src/CMakeFiles/openbabel.dir/reactionfacade.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/reactionfacade.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/reactionfacade.cpp [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/residue.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ 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-I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/rotamer.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/rotamer.cpp [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/rotor.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/rotor.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/rotor.cpp [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/spectrophore.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/spectrophore.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/spectrophore.cpp [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/tautomer.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security 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CXX object src/CMakeFiles/openbabel.dir/typer.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/typer.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/typer.cpp [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/obmolecformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN 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-I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/confsearch.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/confsearch.cpp [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/distgeom.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include 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-isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/dlhandler_unix.cpp [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/depict/depict.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. 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-I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/stereo/tetranonplanar.cpp [ 19%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/stereo/tetraplanar.cpp [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/stereo/squareplanar.cpp [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/stereo/cistrans.cpp [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/stereo/tetrahedral.cpp [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/perception.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/perception.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/stereo/perception.cpp [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/facade.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/openbabel.dir/stereo/facade.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/stereo/facade.cpp /<>/openbabel-3.0.0+dfsg/src/stereo/perception.cpp: In function ‘void OpenBabel::StereoRefToImplicit(OpenBabel::OBMol&, OpenBabel::OBStereo::Ref)’: /<>/openbabel-3.0.0+dfsg/src/stereo/perception.cpp:2880:16: warning: ‘template class std::binder1st’ is deprecated [-Wdeprecated-declarations] 2880 | const std::binder1st > equal_to_atomId = std::bind1st (equal_to(), atomId); | ^~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_function.h:1392, from /usr/include/c++/9/bits/stl_tree.h:65, from /usr/include/c++/9/map:60, from /<>/openbabel-3.0.0+dfsg/include/openbabel/base.h:26, from /<>/openbabel-3.0.0+dfsg/include/openbabel/stereo/stereo.h:27, from /<>/openbabel-3.0.0+dfsg/include/openbabel/stereo/tetranonplanar.h:27, from /<>/openbabel-3.0.0+dfsg/include/openbabel/stereo/tetrahedral.h:27, from /<>/openbabel-3.0.0+dfsg/src/stereo/perception.cpp:26: /usr/include/c++/9/backward/binders.h:108:11: note: declared here 108 | class binder1st | ^~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/stereo/perception.cpp: In function ‘void OpenBabel::ImplicitRefToStereo(OpenBabel::OBMol&, OpenBabel::OBStereo::Ref, OpenBabel::OBStereo::Ref)’: /<>/openbabel-3.0.0+dfsg/src/stereo/perception.cpp:2912:16: warning: ‘template class std::binder1st’ is deprecated [-Wdeprecated-declarations] 2912 | const std::binder1st > equal_to_implicitRef = std::bind1st (equal_to(), (OBStereo::Ref) OBStereo::ImplicitRef); | ^~~~~~~~~ In file included from /usr/include/c++/9/bits/stl_function.h:1392, from /usr/include/c++/9/bits/stl_tree.h:65, from /usr/include/c++/9/map:60, from /<>/openbabel-3.0.0+dfsg/include/openbabel/base.h:26, from /<>/openbabel-3.0.0+dfsg/include/openbabel/stereo/stereo.h:27, from /<>/openbabel-3.0.0+dfsg/include/openbabel/stereo/tetranonplanar.h:27, from /<>/openbabel-3.0.0+dfsg/include/openbabel/stereo/tetrahedral.h:27, from /<>/openbabel-3.0.0+dfsg/src/stereo/perception.cpp:26: /usr/include/c++/9/backward/binders.h:108:11: note: declared here 108 | class binder1st | ^~~~~~~~~ [ 21%] Linking CXX shared library ../lib/libopenbabel.so cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/openbabel.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -Wl,-soname,libopenbabel.so.6 -o ../lib/libopenbabel.so.6.0.0 CMakeFiles/openbabel.dir/alias.cpp.o CMakeFiles/openbabel.dir/atom.cpp.o CMakeFiles/openbabel.dir/base.cpp.o CMakeFiles/openbabel.dir/bitvec.cpp.o CMakeFiles/openbabel.dir/bond.cpp.o CMakeFiles/openbabel.dir/bondtyper.cpp.o CMakeFiles/openbabel.dir/builder.cpp.o CMakeFiles/openbabel.dir/canon.cpp.o CMakeFiles/openbabel.dir/chains.cpp.o CMakeFiles/openbabel.dir/chargemodel.cpp.o CMakeFiles/openbabel.dir/data.cpp.o CMakeFiles/openbabel.dir/data_utilities.cpp.o CMakeFiles/openbabel.dir/descriptor.cpp.o CMakeFiles/openbabel.dir/elements.cpp.o CMakeFiles/openbabel.dir/fingerprint.cpp.o CMakeFiles/openbabel.dir/forcefield.cpp.o CMakeFiles/openbabel.dir/format.cpp.o CMakeFiles/openbabel.dir/generic.cpp.o CMakeFiles/openbabel.dir/graphsym.cpp.o CMakeFiles/openbabel.dir/grid.cpp.o CMakeFiles/openbabel.dir/griddata.cpp.o CMakeFiles/openbabel.dir/isomorphism.cpp.o CMakeFiles/openbabel.dir/kekulize.cpp.o CMakeFiles/openbabel.dir/locale.cpp.o CMakeFiles/openbabel.dir/matrix.cpp.o CMakeFiles/openbabel.dir/mcdlutil.cpp.o CMakeFiles/openbabel.dir/molchrg.cpp.o CMakeFiles/openbabel.dir/mol.cpp.o CMakeFiles/openbabel.dir/obconversion.cpp.o CMakeFiles/openbabel.dir/oberror.cpp.o CMakeFiles/openbabel.dir/obfunctions.cpp.o CMakeFiles/openbabel.dir/obiter.cpp.o CMakeFiles/openbabel.dir/obutil.cpp.o CMakeFiles/openbabel.dir/op.cpp.o CMakeFiles/openbabel.dir/parsmart.cpp.o CMakeFiles/openbabel.dir/patty.cpp.o CMakeFiles/openbabel.dir/phmodel.cpp.o CMakeFiles/openbabel.dir/plugin.cpp.o CMakeFiles/openbabel.dir/pointgroup.cpp.o CMakeFiles/openbabel.dir/query.cpp.o CMakeFiles/openbabel.dir/rand.cpp.o CMakeFiles/openbabel.dir/reactionfacade.cpp.o CMakeFiles/openbabel.dir/residue.cpp.o CMakeFiles/openbabel.dir/ring.cpp.o CMakeFiles/openbabel.dir/rotamer.cpp.o CMakeFiles/openbabel.dir/rotor.cpp.o CMakeFiles/openbabel.dir/spectrophore.cpp.o CMakeFiles/openbabel.dir/tautomer.cpp.o CMakeFiles/openbabel.dir/tokenst.cpp.o CMakeFiles/openbabel.dir/transform.cpp.o CMakeFiles/openbabel.dir/typer.cpp.o CMakeFiles/openbabel.dir/obmolecformat.cpp.o CMakeFiles/openbabel.dir/conformersearch.cpp.o CMakeFiles/openbabel.dir/confsearch.cpp.o CMakeFiles/openbabel.dir/distgeom.cpp.o CMakeFiles/openbabel.dir/dlhandler_unix.cpp.o CMakeFiles/openbabel.dir/depict/depict.cpp.o CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o CMakeFiles/openbabel.dir/math/spacegroup.cpp.o CMakeFiles/openbabel.dir/math/transform3d.cpp.o CMakeFiles/openbabel.dir/math/vector3.cpp.o CMakeFiles/openbabel.dir/math/align.cpp.o CMakeFiles/openbabel.dir/stereo/stereo.cpp.o CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o CMakeFiles/openbabel.dir/stereo/perception.cpp.o CMakeFiles/openbabel.dir/stereo/facade.cpp.o -lmaeparser -lm -ldl -lz -lboost_system cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/cmake -E cmake_symlink_library ../lib/libopenbabel.so.6.0.0 ../lib/libopenbabel.so.6 ../lib/libopenbabel.so make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 21%] Built target openbabel make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src /<>/openbabel-3.0.0+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src /<>/openbabel-3.0.0+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src /<>/openbabel-3.0.0+dfsg/builddir/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src /<>/openbabel-3.0.0+dfsg/builddir/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake --color= Scanning dependencies of target plugin_descriptors make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 21%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o Scanning dependencies of target plugin_forcefields cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/descriptors/cansmidescriptor.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' Scanning dependencies of target plugin_ops make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build [ 21%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/forcefields/forcefieldgaff.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/addfilename.cpp Scanning dependencies of target plugin_charges make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 21%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eem.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/eem.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/charges/eem.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/descriptors/cmpdfilter.cpp [ 21%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/addinindex.cpp [ 22%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/descriptors/groupcontrib.cpp [ 23%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/addpolarh.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/charges/gasteiger.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/addnonpolarh.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/none.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/none.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/charges/none.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/canonical.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/descriptors/filters.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/charges/mmff94.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/changecell.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/descriptors/inchidescriptor.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/charges/fromfile.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_descriptors_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/descriptors/smartsdescriptors.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/delpolarh.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/forcefields/forcefieldghemical.cpp [ 24%] Linking CXX shared module ../lib/plugin_descriptors.so cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_descriptors.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../lib/plugin_descriptors.so CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/filters.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.cpp.o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.cpp.o -lmaeparser -lm -ldl -lz ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 24%] Built target plugin_descriptors make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src /<>/openbabel-3.0.0+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= Scanning dependencies of target plugin_fingerprints make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 24%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/fingerprints/finger2.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/delnonpolarh.cpp [ 24%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/charges/eqeq.cpp [ 25%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/gen2D.cpp [ 25%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/fillUC.cpp [ 26%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/fingerprints/finger3.cpp [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/forcefield.cpp [ 26%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/fingerprints/fingerecfp.cpp [ 26%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/gen3d.cpp [ 27%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/forcefields/forcefieldmmff94.cpp [ 27%] Linking CXX shared module ../lib/plugin_fingerprints.so cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_fingerprints.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../lib/plugin_fingerprints.so CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.cpp.o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.cpp.o CMakeFiles/plugin_fingerprints.dir/fingerprints/fingerecfp.cpp.o -lmaeparser -lm -ldl -lz ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 27%] Built target plugin_fingerprints make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake --color= Scanning dependencies of target pubchem make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 27%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/pubchem.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchem_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pubchem.dir/xml/pubchem.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xml/pubchem.cpp [ 28%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/xml.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchem_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pubchem.dir/xml/xml.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xml/xml.cpp [ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/largest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/largest.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/largest.cpp [ 28%] Linking CXX shared module ../../lib/pubchem.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchem.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/pubchem.so CMakeFiles/pubchem.dir/xml/pubchem.cpp.o CMakeFiles/pubchem.dir/xml/xml.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 28%] Built target pubchem make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake --color= Scanning dependencies of target cdxmlformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 28%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xml/cdxmlformat.cpp [ 29%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/loader.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/loader.cpp [ 29%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcdxmlformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xml/xml.cpp [ 29%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/opsplit.cpp [ 29%] Linking CXX shared module ../../lib/cdxmlformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cdxmlformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/cdxmlformat.so CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.cpp.o CMakeFiles/cdxmlformat.dir/xml/xml.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 29%] Built target cdxmlformat make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake --color= Scanning dependencies of target png2format make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 29%] Building CXX object src/formats/CMakeFiles/png2format.dir/png2format.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpng2format_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/png2format.dir/png2format.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/png2format.cpp [ 29%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/optransform.cpp [ 30%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/charges/qeq.cpp [ 30%] Building CXX object src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpng2format_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/depict/cairopainter.cpp [ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/partialcharges.cpp [ 30%] Linking CXX shared module ../../lib/png2format.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/png2format.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/png2format.so CMakeFiles/png2format.dir/png2format.cpp.o CMakeFiles/png2format.dir/__/depict/cairopainter.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 30%] Built target png2format make -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/rinchiformat.dir/DependInfo.cmake --color= Scanning dependencies of target rinchiformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 30%] Building CXX object src/formats/CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Drinchiformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/rinchiformat.cpp [ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/readconformers.cpp [ 30%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_forcefields_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/forcefields/forcefielduff.cpp [ 31%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/sort.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/sort.cpp [ 32%] Linking CXX shared module ../../lib/rinchiformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rinchiformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/rinchiformat.so CMakeFiles/rinchiformat.dir/rinchiformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 32%] Built target rinchiformat make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake --color= Scanning dependencies of target chemkinformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 32%] Building CXX object src/formats/CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemkinformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/chemkinformat.cpp [ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/opisomorph.cpp [ 32%] Linking CXX shared module ../../lib/chemkinformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemkinformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/chemkinformat.so CMakeFiles/chemkinformat.dir/chemkinformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/ophighlight.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 32%] Built target chemkinformat make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake --color= Scanning dependencies of target chemdrawcdx make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 32%] Building CXX object src/formats/CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemdrawcdx_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/chemdrawcdx.cpp [ 32%] Linking CXX shared module ../lib/plugin_forcefields.so cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_forcefields.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../lib/plugin_forcefields.so CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.cpp.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.cpp.o -lmaeparser -lm -ldl -lz ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 32%] Built target plugin_forcefields make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake --color= Scanning dependencies of target cmlformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 32%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xml/cmlformat.cpp [ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/xout.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/xout.cpp [ 32%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/conformer.cpp [ 32%] Linking CXX shared module ../../lib/chemdrawcdx.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawcdx.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/chemdrawcdx.so CMakeFiles/chemdrawcdx.dir/chemdrawcdx.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 32%] Built target chemdrawcdx make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake --color= Scanning dependencies of target rxnformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 33%] Building CXX object src/formats/CMakeFiles/rxnformat.dir/rxnformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Drxnformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/rxnformat.dir/rxnformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/rxnformat.cpp [ 33%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/opalign.cpp [ 33%] Linking CXX shared module ../../lib/rxnformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/rxnformat.so CMakeFiles/rxnformat.dir/rxnformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 33%] Built target rxnformat make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake --color= Scanning dependencies of target xyzformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 34%] Building CXX object src/formats/CMakeFiles/xyzformat.dir/xyzformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxyzformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/xyzformat.dir/xyzformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xyzformat.cpp [ 34%] Linking CXX shared module ../../lib/xyzformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xyzformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/xyzformat.so CMakeFiles/xyzformat.dir/xyzformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 34%] Built target xyzformat make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake --color= Scanning dependencies of target xedformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 34%] Building CXX object src/formats/CMakeFiles/xedformat.dir/xedformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxedformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/xedformat.dir/xedformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xedformat.cpp [ 35%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_ops_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/opconfab.cpp [ 35%] Linking CXX shared module ../../lib/xedformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xedformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/xedformat.so CMakeFiles/xedformat.dir/xedformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Built target xedformat make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake --color= Scanning dependencies of target unichemformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Building CXX object src/formats/CMakeFiles/unichemformat.dir/unichemformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dunichemformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/unichemformat.dir/unichemformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/unichemformat.cpp [ 35%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/xml.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cmlformat.dir/xml/xml.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xml/xml.cpp [ 35%] Linking CXX shared module ../lib/plugin_ops.so cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_ops.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../lib/plugin_ops.so CMakeFiles/plugin_ops.dir/ops/addfilename.cpp.o CMakeFiles/plugin_ops.dir/ops/addinindex.cpp.o CMakeFiles/plugin_ops.dir/ops/addpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/addnonpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/canonical.cpp.o CMakeFiles/plugin_ops.dir/ops/changecell.cpp.o CMakeFiles/plugin_ops.dir/ops/delpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/delnonpolarh.cpp.o CMakeFiles/plugin_ops.dir/ops/gen2D.cpp.o CMakeFiles/plugin_ops.dir/ops/fillUC.cpp.o CMakeFiles/plugin_ops.dir/ops/forcefield.cpp.o CMakeFiles/plugin_ops.dir/ops/gen3d.cpp.o CMakeFiles/plugin_ops.dir/ops/largest.cpp.o CMakeFiles/plugin_ops.dir/ops/loader.cpp.o CMakeFiles/plugin_ops.dir/ops/opsplit.cpp.o CMakeFiles/plugin_ops.dir/ops/optransform.cpp.o CMakeFiles/plugin_ops.dir/ops/partialcharges.cpp.o CMakeFiles/plugin_ops.dir/ops/readconformers.cpp.o CMakeFiles/plugin_ops.dir/ops/sort.cpp.o CMakeFiles/plugin_ops.dir/ops/opisomorph.cpp.o CMakeFiles/plugin_ops.dir/ops/ophighlight.cpp.o CMakeFiles/plugin_ops.dir/ops/xout.cpp.o CMakeFiles/plugin_ops.dir/ops/conformer.cpp.o CMakeFiles/plugin_ops.dir/ops/opalign.cpp.o CMakeFiles/plugin_ops.dir/ops/opconfab.cpp.o -lmaeparser -lm -ldl -lz ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Built target plugin_ops make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake --color= Scanning dependencies of target thermoformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Building CXX object src/formats/CMakeFiles/thermoformat.dir/thermoformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dthermoformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/thermoformat.dir/thermoformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/thermoformat.cpp [ 35%] Linking CXX shared module ../../lib/unichemformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/unichemformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/unichemformat.so CMakeFiles/unichemformat.dir/unichemformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Built target unichemformat make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake --color= Scanning dependencies of target smileyformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Building CXX object src/formats/CMakeFiles/smileyformat.dir/smileyformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsmileyformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/smileyformat.dir/smileyformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/smileyformat.cpp [ 35%] Linking CXX shared module ../../lib/cmlformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/cmlformat.so CMakeFiles/cmlformat.dir/xml/cmlformat.cpp.o CMakeFiles/cmlformat.dir/xml/xml.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Built target cmlformat make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake --color= Scanning dependencies of target shelxformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Building CXX object src/formats/CMakeFiles/shelxformat.dir/shelxformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dshelxformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/shelxformat.dir/shelxformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/shelxformat.cpp [ 35%] Linking CXX shared module ../../lib/thermoformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/thermoformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/thermoformat.so CMakeFiles/thermoformat.dir/thermoformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Built target thermoformat make -f src/formats/CMakeFiles/maeformat.dir/build.make src/formats/CMakeFiles/maeformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/maeformat.dir/DependInfo.cmake --color= Scanning dependencies of target maeformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/maeformat.dir/build.make src/formats/CMakeFiles/maeformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Building CXX object src/formats/CMakeFiles/maeformat.dir/maeformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmaeformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/maeformat.dir/maeformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/maeformat.cpp [ 35%] Linking CXX shared module ../../lib/shelxformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/shelxformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/shelxformat.so CMakeFiles/shelxformat.dir/shelxformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Built target shelxformat make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake --color= Scanning dependencies of target jaguarformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Building CXX object src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Djaguarformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/jaguarformat.cpp [ 35%] Linking CXX shared module ../../lib/smileyformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smileyformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/smileyformat.so CMakeFiles/smileyformat.dir/smileyformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Built target smileyformat [ 35%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dplugin_charges_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/charges/qtpie.cpp [ 36%] Linking CXX shared module ../../lib/jaguarformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/jaguarformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/jaguarformat.so CMakeFiles/jaguarformat.dir/jaguarformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 36%] Built target jaguarformat make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake --color= Scanning dependencies of target abinitformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 37%] Building CXX object src/formats/CMakeFiles/abinitformat.dir/abinitformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dabinitformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/abinitformat.dir/abinitformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/abinitformat.cpp make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/exyzformat.dir/DependInfo.cmake --color= Scanning dependencies of target exyzformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 37%] Building CXX object src/formats/CMakeFiles/exyzformat.dir/exyzformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dexyzformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/exyzformat.dir/exyzformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/exyzformat.cpp [ 37%] Linking CXX shared module ../../lib/abinitformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/abinitformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/abinitformat.so CMakeFiles/abinitformat.dir/abinitformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 37%] Built target abinitformat make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake --color= Scanning dependencies of target gausscubeformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 37%] Building CXX object src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgausscubeformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/gausscubeformat.cpp [ 38%] Linking CXX shared module ../../lib/maeformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/maeformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/maeformat.so CMakeFiles/maeformat.dir/maeformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 38%] Built target maeformat make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake --color= Scanning dependencies of target gamessformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 38%] Building CXX object src/formats/CMakeFiles/gamessformat.dir/gamessformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgamessformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gamessformat.dir/gamessformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/gamessformat.cpp [ 39%] Linking CXX shared module ../../lib/exyzformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/exyzformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/exyzformat.so CMakeFiles/exyzformat.dir/exyzformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 39%] Built target exyzformat make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake --color= Scanning dependencies of target tinkerformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 40%] Building CXX object src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtinkerformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/tinkerformat.cpp [ 40%] Linking CXX shared module ../../lib/gausscubeformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausscubeformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/gausscubeformat.so CMakeFiles/gausscubeformat.dir/gausscubeformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 40%] Linking CXX shared module ../../lib/tinkerformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinkerformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/tinkerformat.so CMakeFiles/tinkerformat.dir/tinkerformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 40%] Built target gausscubeformat make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake --color= Scanning dependencies of target dmolformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 40%] Building CXX object src/formats/CMakeFiles/dmolformat.dir/dmolformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddmolformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/dmolformat.dir/dmolformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/dmolformat.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 40%] Built target tinkerformat make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake --color= Scanning dependencies of target xmlformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 40%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxmlformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xml/xmlformat.cpp [ 40%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xml.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxmlformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/xmlformat.dir/xml/xml.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xml/xml.cpp [ 40%] Linking CXX shared module ../../lib/dmolformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dmolformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/dmolformat.so CMakeFiles/dmolformat.dir/dmolformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 40%] Built target dmolformat make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake --color= Scanning dependencies of target daltonformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 40%] Building CXX object src/formats/CMakeFiles/daltonformat.dir/daltonformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddaltonformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/daltonformat.dir/daltonformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/daltonformat.cpp [ 41%] Linking CXX shared module ../../lib/xmlformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xmlformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/xmlformat.so CMakeFiles/xmlformat.dir/xml/xmlformat.cpp.o CMakeFiles/xmlformat.dir/xml/xml.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 41%] Built target xmlformat make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake --color= Scanning dependencies of target pqrformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 41%] Building CXX object src/formats/CMakeFiles/pqrformat.dir/pqrformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpqrformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pqrformat.dir/pqrformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/pqrformat.cpp [ 41%] Linking CXX shared module ../../lib/gamessformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/gamessformat.so CMakeFiles/gamessformat.dir/gamessformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 41%] Built target gamessformat make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake --color= Scanning dependencies of target crystal09format make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 42%] Building CXX object src/formats/CMakeFiles/crystal09format.dir/crystal09format.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcrystal09format_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/crystal09format.dir/crystal09format.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/crystal09format.cpp [ 43%] Linking CXX shared module ../../lib/daltonformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/daltonformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/daltonformat.so CMakeFiles/daltonformat.dir/daltonformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 43%] Built target daltonformat make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake --color= Scanning dependencies of target nwchemformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 43%] Building CXX object src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dnwchemformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/nwchemformat.cpp /<>/openbabel-3.0.0+dfsg/src/formats/pqrformat.cpp: In member function ‘virtual bool OpenBabel::PQRFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)’: /<>/openbabel-3.0.0+dfsg/src/formats/pqrformat.cpp:511:58: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 511 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/pqrformat.cpp:16: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 5 and 11 bytes into a destination of size 10 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/formats/pqrformat.cpp:528:66: warning: ‘%-3s’ directive output may be truncated writing between 3 and 15 bytes into a region of size 9 [-Wformat-truncation=] 528 | snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); | ^~~~ ~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/pqrformat.cpp:16: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 5 and 17 bytes into a destination of size 10 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Linking CXX shared module ../../lib/crystal09format.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crystal09format.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/crystal09format.so CMakeFiles/crystal09format.dir/crystal09format.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 43%] Linking CXX shared module ../../lib/pqrformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pqrformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/pqrformat.so CMakeFiles/pqrformat.dir/pqrformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 43%] Built target crystal09format make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake --color= Scanning dependencies of target mdlformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 43%] Building CXX object src/formats/CMakeFiles/mdlformat.dir/mdlformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmdlformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mdlformat.dir/mdlformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/mdlformat.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 43%] Built target pqrformat make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/molreport.dir/DependInfo.cmake --color= Scanning dependencies of target molreport make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 43%] Building CXX object src/formats/CMakeFiles/molreport.dir/molreport.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmolreport_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/molreport.dir/molreport.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/molreport.cpp [ 44%] Linking CXX shared module ../../lib/molreport.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molreport.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/molreport.so CMakeFiles/molreport.dir/molreport.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 44%] Built target molreport make -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pubchemjsonformat.dir/DependInfo.cmake --color= Scanning dependencies of target pubchemjsonformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 44%] Building CXX object src/formats/CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpubchemjsonformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/json/pubchemjsonformat.cpp [ 44%] Linking CXX shared module ../../lib/nwchemformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nwchemformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/nwchemformat.so CMakeFiles/nwchemformat.dir/nwchemformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 44%] Built target nwchemformat make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake --color= Scanning dependencies of target hinformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Building CXX object src/formats/CMakeFiles/hinformat.dir/hinformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dhinformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/hinformat.dir/hinformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/hinformat.cpp [ 45%] Linking CXX shared module ../../lib/hinformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/hinformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/hinformat.so CMakeFiles/hinformat.dir/hinformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system /<>/openbabel-3.0.0+dfsg/src/formats/mdlformat.cpp: In member function ‘std::string OpenBabel::MDLFormat::GetTimeDate()’: /<>/openbabel-3.0.0+dfsg/src/formats/mdlformat.cpp:1695:27: warning: ‘%02d’ directive output may be truncated writing between 2 and 11 bytes into a region of size between 0 and 9 [-Wformat-truncation=] 1695 | snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, | ^~~~ /<>/openbabel-3.0.0+dfsg/src/formats/mdlformat.cpp:1695:22: note: directive argument in the range [-2147483648, 2147483547] 1695 | snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday, | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/iomanip:40, from /<>/openbabel-3.0.0+dfsg/src/formats/mdlformat.cpp:27: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 11 and 56 bytes into a destination of size 11 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Built target hinformat make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake --color= Scanning dependencies of target mopacformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Building CXX object src/formats/CMakeFiles/mopacformat.dir/mopacformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmopacformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mopacformat.dir/mopacformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/mopacformat.cpp [ 45%] Linking CXX shared module ../../lib/mopacformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mopacformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/mopacformat.so CMakeFiles/mopacformat.dir/mopacformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Built target mopacformat make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake --color= Scanning dependencies of target gausszmatformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Building CXX object src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgausszmatformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/gausszmatformat.cpp [ 45%] Linking CXX shared module ../../lib/mdlformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/mdlformat.so CMakeFiles/mdlformat.dir/mdlformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Built target mdlformat make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake --color= Scanning dependencies of target fhiaimsformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Building CXX object src/formats/CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfhiaimsformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/fhiaimsformat.cpp [ 45%] Linking CXX shared module ../../lib/pubchemjsonformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchemjsonformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/pubchemjsonformat.so CMakeFiles/pubchemjsonformat.dir/json/pubchemjsonformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Built target pubchemjsonformat make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake --color= Scanning dependencies of target copyformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Building CXX object src/formats/CMakeFiles/copyformat.dir/copyformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcopyformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/copyformat.dir/copyformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/copyformat.cpp [ 45%] Linking CXX shared module ../../lib/copyformat.so [ 45%] Linking CXX shared module ../../lib/fhiaimsformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhiaimsformat.dir/link.txt --verbose=1 cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/copyformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/fhiaimsformat.so CMakeFiles/fhiaimsformat.dir/fhiaimsformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/copyformat.so CMakeFiles/copyformat.dir/copyformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Built target copyformat [ 45%] Built target fhiaimsformat make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/depend make -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cofformat.dir/DependInfo.cmake --color= Scanning dependencies of target turbomoleformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build Scanning dependencies of target cofformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Building CXX object src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dturbomoleformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/turbomoleformat.cpp [ 45%] Building CXX object src/formats/CMakeFiles/cofformat.dir/cofformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcofformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cofformat.dir/cofformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/cofformat.cpp [ 45%] Linking CXX shared module ../../lib/gausszmatformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausszmatformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/gausszmatformat.so CMakeFiles/gausszmatformat.dir/gausszmatformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Built target gausszmatformat make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake --color= Scanning dependencies of target mol2format make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Building CXX object src/formats/CMakeFiles/mol2format.dir/mol2format.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmol2format_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mol2format.dir/mol2format.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/mol2format.cpp [ 46%] Linking CXX shared module ../../lib/turbomoleformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/turbomoleformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/turbomoleformat.so CMakeFiles/turbomoleformat.dir/turbomoleformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 46%] Built target turbomoleformat make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake --color= Scanning dependencies of target amberformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 46%] Building CXX object src/formats/CMakeFiles/amberformat.dir/amberformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Damberformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/amberformat.dir/amberformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/amberformat.cpp /<>/openbabel-3.0.0+dfsg/src/formats/mol2format.cpp: In member function ‘virtual bool OpenBabel::MOL2Format::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)’: /<>/openbabel-3.0.0+dfsg/src/formats/mol2format.cpp:720:40: warning: ‘%-6s’ directive output may be truncated writing between 6 and 32767 bytes into a region of size between 32756 and 32760 [-Wformat-truncation=] 720 | snprintf(buffer,BUFF_SIZE,"%7d %-6s %9.4f %9.4f %9.4f %-5s %3s %-8s %9.4f", | ^~~~ 721 | atom->GetIdx(),label, | ~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/mol2format.cpp:17: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output 77 or more bytes (assuming 98361) into a destination of size 32768 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/formats/mol2format.cpp:760:51: warning: ‘%2s’ directive output may be truncated writing between 2 and 32767 bytes into a region of size between 32730 and 32747 [-Wformat-truncation=] 760 | snprintf(buffer, BUFF_SIZE,"%6d %5d %5d %2s", | ^~~ 761 | bond->GetIdx()+1,bond->GetBeginAtomIdx(),bond->GetEndAtomIdx(), 762 | label); | ~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/mol2format.cpp:17: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 24 and 32806 bytes into a destination of size 32768 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 46%] Linking CXX shared module ../../lib/cofformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cofformat.dir/link.txt --verbose=1 [ 47%] Linking CXX shared module ../../lib/amberformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/amberformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/cofformat.so CMakeFiles/cofformat.dir/cofformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/amberformat.so CMakeFiles/amberformat.dir/amberformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 47%] Linking CXX shared module ../lib/plugin_charges.so cd /<>/openbabel-3.0.0+dfsg/builddir/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_charges.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../lib/plugin_charges.so CMakeFiles/plugin_charges.dir/charges/eem.cpp.o CMakeFiles/plugin_charges.dir/charges/gasteiger.cpp.o CMakeFiles/plugin_charges.dir/charges/none.cpp.o CMakeFiles/plugin_charges.dir/charges/mmff94.cpp.o CMakeFiles/plugin_charges.dir/charges/fromfile.cpp.o CMakeFiles/plugin_charges.dir/charges/eqeq.cpp.o CMakeFiles/plugin_charges.dir/charges/qeq.cpp.o CMakeFiles/plugin_charges.dir/charges/qtpie.cpp.o -lmaeparser -lm -ldl -lz ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 47%] Built target amberformat [ 47%] Built target cofformat make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/depend make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake --color= Scanning dependencies of target CSRformat Scanning dependencies of target vaspformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/build make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 47%] Building CXX object src/formats/CMakeFiles/CSRformat.dir/CSRformat.cpp.o [ 47%] Building CXX object src/formats/CMakeFiles/vaspformat.dir/vaspformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dvaspformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/vaspformat.dir/vaspformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/vaspformat.cpp cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DCSRformat_EXPORTS -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/CSRformat.dir/CSRformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/CSRformat.cpp [ 48%] Linking CXX shared module ../../lib/mol2format.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mol2format.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/mol2format.so CMakeFiles/mol2format.dir/mol2format.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 48%] Built target plugin_charges make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake --color= Scanning dependencies of target cssrformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 48%] Building CXX object src/formats/CMakeFiles/cssrformat.dir/cssrformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcssrformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cssrformat.dir/cssrformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/cssrformat.cpp [ 48%] Built target mol2format make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake --color= Scanning dependencies of target pdbformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 48%] Building CXX object src/formats/CMakeFiles/pdbformat.dir/pdbformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpdbformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pdbformat.dir/pdbformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/pdbformat.cpp In file included from /usr/include/string.h:494, from /usr/include/c++/9/cstring:42, from /<>/openbabel-3.0.0+dfsg/include/openbabel/plugin.h:29, from /<>/openbabel-3.0.0+dfsg/include/openbabel/format.h:22, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:37, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/CSRformat.cpp:17: In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘char* OpenBabel::CSRFormat::PadString(char*, int)’ at /<>/openbabel-3.0.0+dfsg/src/formats/CSRformat.cpp:192:12: /usr/include/aarch64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/formats/CSRformat.cpp: In member function ‘char* OpenBabel::CSRFormat::PadString(char*, int)’: /<>/openbabel-3.0.0+dfsg/src/formats/CSRformat.cpp:192:12: note: length computed here 192 | strncpy(output, input, strlen(input)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 48%] Linking CXX shared module ../../lib/CSRformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/CSRformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/CSRformat.so CMakeFiles/CSRformat.dir/CSRformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 48%] Built target CSRformat make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake --color= Scanning dependencies of target pwscfformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 48%] Building CXX object src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpwscfformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/pwscfformat.cpp [ 48%] Linking CXX shared module ../../lib/cssrformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cssrformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/cssrformat.so CMakeFiles/cssrformat.dir/cssrformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 48%] Built target cssrformat make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake --color= Scanning dependencies of target aoforceformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 48%] Building CXX object src/formats/CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Daoforceformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/aoforceformat.cpp /<>/openbabel-3.0.0+dfsg/src/formats/pdbformat.cpp: In member function ‘virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)’: /<>/openbabel-3.0.0+dfsg/src/formats/pdbformat.cpp:684:58: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 684 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/pdbformat.cpp:17: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 5 and 11 bytes into a destination of size 10 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/formats/pdbformat.cpp:702:70: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 702 | snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/pdbformat.cpp:17: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 5 and 11 bytes into a destination of size 10 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/formats/pdbformat.cpp:739:35: warning: ‘%+d’ directive output may be truncated writing between 2 and 6 bytes into a region of size 3 [-Wformat-truncation=] 739 | snprintf(scharge, 3, "%+d", charge); | ^~~ /<>/openbabel-3.0.0+dfsg/src/formats/pdbformat.cpp:739:34: note: directive argument in the range [-32768, 32767] 739 | snprintf(scharge, 3, "%+d", charge); | ^~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/pdbformat.cpp:17: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 3 and 7 bytes into a destination of size 3 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Linking CXX shared module ../../lib/pwscfformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwscfformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/pwscfformat.so CMakeFiles/pwscfformat.dir/pwscfformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 49%] Built target pwscfformat make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake --color= Scanning dependencies of target povrayformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 49%] Building CXX object src/formats/CMakeFiles/povrayformat.dir/povrayformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpovrayformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/povrayformat.dir/povrayformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/povrayformat.cpp [ 49%] Linking CXX shared module ../../lib/aoforceformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/aoforceformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/aoforceformat.so CMakeFiles/aoforceformat.dir/aoforceformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 49%] Built target aoforceformat make -f src/formats/CMakeFiles/chemdoodlejsonformat.dir/build.make src/formats/CMakeFiles/chemdoodlejsonformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/chemdoodlejsonformat.dir/DependInfo.cmake --color= Scanning dependencies of target chemdoodlejsonformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/chemdoodlejsonformat.dir/build.make src/formats/CMakeFiles/chemdoodlejsonformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 49%] Building CXX object src/formats/CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemdoodlejsonformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/json/chemdoodlejsonformat.cpp [ 49%] Linking CXX shared module ../../lib/pdbformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/pdbformat.so CMakeFiles/pdbformat.dir/pdbformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 49%] Linking CXX shared module ../../lib/vaspformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/vaspformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/vaspformat.so CMakeFiles/vaspformat.dir/vaspformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 49%] Built target pdbformat make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake --color= Scanning dependencies of target MNAformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 49%] Building CXX object src/formats/CMakeFiles/MNAformat.dir/MNAformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMNAformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/MNAformat.dir/MNAformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/MNAformat.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 49%] Built target vaspformat make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake --color= Scanning dependencies of target chemdrawct make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 50%] Building CXX object src/formats/CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemdrawct_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/chemdrawct.cpp [ 50%] Linking CXX shared module ../../lib/povrayformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/povrayformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/povrayformat.so CMakeFiles/povrayformat.dir/povrayformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 50%] Built target povrayformat make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake --color= Scanning dependencies of target textformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 50%] Building CXX object src/formats/CMakeFiles/textformat.dir/textformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtextformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/textformat.dir/textformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/textformat.cpp [ 50%] Linking CXX shared module ../../lib/chemdrawct.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawct.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/chemdrawct.so CMakeFiles/chemdrawct.dir/chemdrawct.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 50%] Built target chemdrawct make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fastaformat.dir/DependInfo.cmake --color= Scanning dependencies of target fastaformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 50%] Building CXX object src/formats/CMakeFiles/fastaformat.dir/fastaformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfastaformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fastaformat.dir/fastaformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/fastaformat.cpp [ 50%] Linking CXX shared module ../../lib/textformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/textformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/textformat.so CMakeFiles/textformat.dir/textformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 50%] Built target textformat make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake --color= Scanning dependencies of target fpsformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 50%] Building CXX object src/formats/CMakeFiles/fpsformat.dir/fpsformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfpsformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fpsformat.dir/fpsformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/fpsformat.cpp [ 50%] Linking CXX shared module ../../lib/MNAformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MNAformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/MNAformat.so CMakeFiles/MNAformat.dir/MNAformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 50%] Built target MNAformat make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/DependInfo.cmake --color= Scanning dependencies of target siestaformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 50%] Building CXX object src/formats/CMakeFiles/siestaformat.dir/siestaformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsiestaformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/siestaformat.dir/siestaformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/siestaformat.cpp [ 50%] Linking CXX shared module ../../lib/fastaformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastaformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/fastaformat.so CMakeFiles/fastaformat.dir/fastaformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 50%] Built target fastaformat make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake --color= Scanning dependencies of target opendxformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 50%] Building CXX object src/formats/CMakeFiles/opendxformat.dir/opendxformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dopendxformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/opendxformat.dir/opendxformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/opendxformat.cpp [ 51%] Linking CXX shared module ../../lib/fpsformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpsformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/fpsformat.so CMakeFiles/fpsformat.dir/fpsformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 51%] Built target fpsformat make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake --color= Scanning dependencies of target viewmolformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 52%] Building CXX object src/formats/CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dviewmolformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/viewmolformat.cpp [ 52%] Linking CXX shared module ../../lib/viewmolformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/viewmolformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/viewmolformat.so CMakeFiles/viewmolformat.dir/viewmolformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 52%] Built target viewmolformat make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake --color= Scanning dependencies of target svgformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 52%] Building CXX object src/formats/CMakeFiles/svgformat.dir/svgformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsvgformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/svgformat.dir/svgformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/svgformat.cpp [ 52%] Linking CXX shared module ../../lib/chemdoodlejsonformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdoodlejsonformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/chemdoodlejsonformat.so CMakeFiles/chemdoodlejsonformat.dir/json/chemdoodlejsonformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 53%] Linking CXX shared module ../../lib/siestaformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/siestaformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/siestaformat.so CMakeFiles/siestaformat.dir/siestaformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target chemdoodlejsonformat make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color= Scanning dependencies of target cacaoformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Building CXX object src/formats/CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcacaoformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/cacaoformat.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target siestaformat make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake --color= Scanning dependencies of target dlpolyformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Building CXX object src/formats/CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Ddlpolyformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/dlpolyformat.cpp [ 53%] Linking CXX shared module ../../lib/opendxformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/opendxformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/opendxformat.so CMakeFiles/opendxformat.dir/opendxformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target opendxformat make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake --color= Scanning dependencies of target xsfformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Building CXX object src/formats/CMakeFiles/xsfformat.dir/xsfformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxsfformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/xsfformat.dir/xsfformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xsfformat.cpp [ 53%] Linking CXX shared module ../../lib/cacaoformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacaoformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/cacaoformat.so CMakeFiles/cacaoformat.dir/cacaoformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target cacaoformat make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake --color= Scanning dependencies of target gromos96format make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Building CXX object src/formats/CMakeFiles/gromos96format.dir/gromos96format.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgromos96format_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gromos96format.dir/gromos96format.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/gromos96format.cpp [ 53%] Linking CXX shared module ../../lib/svgformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/svgformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/svgformat.so CMakeFiles/svgformat.dir/svgformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 53%] Linking CXX shared module ../../lib/xsfformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xsfformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/xsfformat.so CMakeFiles/xsfformat.dir/xsfformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target svgformat make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/smilesformat.dir/DependInfo.cmake --color= Scanning dependencies of target smilesformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Building CXX object src/formats/CMakeFiles/smilesformat.dir/smilesformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dsmilesformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/smilesformat.dir/smilesformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/smilesformat.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target xsfformat make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake --color= Scanning dependencies of target yasaraformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Building CXX object src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dyasaraformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/yasaraformat.cpp [ 53%] Linking CXX shared module ../../lib/gromos96format.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gromos96format.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/gromos96format.so CMakeFiles/gromos96format.dir/gromos96format.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target gromos96format make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/reportformat.dir/DependInfo.cmake --color= /<>/openbabel-3.0.0+dfsg/src/formats/yasaraformat.cpp: In member function ‘virtual bool OpenBabel::YOBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)’: /<>/openbabel-3.0.0+dfsg/src/formats/yasaraformat.cpp:572:36: warning: ‘__builtin___snprintf_chk’ output truncated before the last format character [-Wformat-truncation=] 572 | snprintf(&buffer[12], 4, "%4d",res->GetNum()); } | ^ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/yasaraformat.cpp:34: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 5 and 12 bytes into a destination of size 4 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Scanning dependencies of target reportformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Building CXX object src/formats/CMakeFiles/reportformat.dir/reportformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dreportformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/reportformat.dir/reportformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/reportformat.cpp [ 53%] Linking CXX shared module ../../lib/yasaraformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/yasaraformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/yasaraformat.so CMakeFiles/yasaraformat.dir/yasaraformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target yasaraformat make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake --color= Scanning dependencies of target bgfformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Building CXX object src/formats/CMakeFiles/bgfformat.dir/bgfformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbgfformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/bgfformat.dir/bgfformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/bgfformat.cpp [ 53%] Linking CXX shared module ../../lib/dlpolyformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlpolyformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/dlpolyformat.so CMakeFiles/dlpolyformat.dir/dlpolyformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target dlpolyformat make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake --color= Scanning dependencies of target stlformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Building CXX object src/formats/CMakeFiles/stlformat.dir/stlformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dstlformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/stlformat.dir/stlformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/stlformat.cpp [ 53%] Linking CXX shared module ../../lib/reportformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/reportformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/reportformat.so CMakeFiles/reportformat.dir/reportformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target reportformat make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake --color= Scanning dependencies of target ghemicalformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Building CXX object src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dghemicalformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/ghemicalformat.cpp [ 54%] Linking CXX shared module ../../lib/stlformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/stlformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/stlformat.so CMakeFiles/stlformat.dir/stlformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 54%] Built target stlformat make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/DependInfo.cmake --color= Scanning dependencies of target confabreport make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 54%] Building CXX object src/formats/CMakeFiles/confabreport.dir/confabreport.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dconfabreport_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/confabreport.dir/confabreport.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/confabreport.cpp [ 54%] Linking CXX shared module ../../lib/bgfformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/bgfformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/bgfformat.so CMakeFiles/bgfformat.dir/bgfformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 54%] Built target bgfformat make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color= Scanning dependencies of target msiformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 54%] Building CXX object src/formats/CMakeFiles/msiformat.dir/msiformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmsiformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/msiformat.dir/msiformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/msiformat.cpp [ 54%] Linking CXX shared module ../../lib/ghemicalformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/ghemicalformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/ghemicalformat.so CMakeFiles/ghemicalformat.dir/ghemicalformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 54%] Built target ghemicalformat make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake --color= Scanning dependencies of target nulformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 55%] Building CXX object src/formats/CMakeFiles/nulformat.dir/nulformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dnulformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/nulformat.dir/nulformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/nulformat.cpp [ 55%] Linking CXX shared module ../../lib/msiformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msiformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/msiformat.so CMakeFiles/msiformat.dir/msiformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 55%] Built target msiformat make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake --color= Scanning dependencies of target PQSformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 55%] Building CXX object src/formats/CMakeFiles/PQSformat.dir/PQSformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DPQSformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/PQSformat.dir/PQSformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/PQSformat.cpp /<>/openbabel-3.0.0+dfsg/src/formats/smilesformat.cpp: In member function ‘bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector&, std::vector&, std::string&)’: /<>/openbabel-3.0.0+dfsg/src/formats/smilesformat.cpp:2847:35: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 2847 | snprintf(tcount, 10, "%d", hcount); | ^ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/smilesformat.cpp:23: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 2 and 11 bytes into a destination of size 10 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/formats/smilesformat.cpp:2839:35: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 2839 | snprintf(tcount, 10, "%d", i); | ^ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/smilesformat.cpp:23: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 2 and 11 bytes into a destination of size 10 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 56%] Linking CXX shared module ../../lib/confabreport.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/confabreport.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/confabreport.so CMakeFiles/confabreport.dir/confabreport.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 56%] Linking CXX shared module ../../lib/nulformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nulformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/nulformat.so CMakeFiles/nulformat.dir/nulformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 56%] Built target confabreport make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake --color= Scanning dependencies of target gulpformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 56%] Building CXX object src/formats/CMakeFiles/gulpformat.dir/gulpformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgulpformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gulpformat.dir/gulpformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/gulpformat.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 56%] Built target nulformat make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake --color= Scanning dependencies of target adfformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 57%] Building CXX object src/formats/CMakeFiles/adfformat.dir/adfformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dadfformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/adfformat.dir/adfformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/adfformat.cpp [ 57%] Linking CXX shared module ../../lib/PQSformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/PQSformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/PQSformat.so CMakeFiles/PQSformat.dir/PQSformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 57%] Built target PQSformat make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake --color= Scanning dependencies of target pngformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Building CXX object src/formats/CMakeFiles/pngformat.dir/pngformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpngformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pngformat.dir/pngformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/pngformat.cpp [ 58%] Linking CXX shared module ../../lib/gulpformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gulpformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/gulpformat.so CMakeFiles/gulpformat.dir/gulpformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Built target gulpformat make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake --color= Scanning dependencies of target acesformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Building CXX object src/formats/CMakeFiles/acesformat.dir/acesformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dacesformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/acesformat.dir/acesformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/acesformat.cpp [ 58%] Linking CXX shared module ../../lib/pngformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pngformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/pngformat.so CMakeFiles/pngformat.dir/pngformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Built target pngformat make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color= Scanning dependencies of target qchemformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Building CXX object src/formats/CMakeFiles/qchemformat.dir/qchemformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dqchemformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/qchemformat.dir/qchemformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/qchemformat.cpp [ 58%] Linking CXX shared module ../../lib/adfformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/adfformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/adfformat.so CMakeFiles/adfformat.dir/adfformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 58%] Linking CXX shared module ../../lib/smilesformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smilesformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/smilesformat.so CMakeFiles/smilesformat.dir/smilesformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Built target adfformat make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake --color= Scanning dependencies of target titleformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Building CXX object src/formats/CMakeFiles/titleformat.dir/titleformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dtitleformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/titleformat.dir/titleformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/titleformat.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Built target smilesformat make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake --color= Scanning dependencies of target asciiformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/asciiformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dasciiformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/asciiformat.dir/asciiformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/asciiformat.cpp [ 58%] Linking CXX shared module ../../lib/acesformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acesformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/acesformat.so CMakeFiles/acesformat.dir/acesformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Built target acesformat make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake --color= Scanning dependencies of target cccformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Building CXX object src/formats/CMakeFiles/cccformat.dir/cccformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcccformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cccformat.dir/cccformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/cccformat.cpp [ 58%] Linking CXX shared module ../../lib/titleformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/titleformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/titleformat.so CMakeFiles/titleformat.dir/titleformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 58%] Linking CXX shared module ../../lib/qchemformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/qchemformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/qchemformat.so CMakeFiles/qchemformat.dir/qchemformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Built target titleformat make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake --color= Scanning dependencies of target cmlreactformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 59%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xml/cmlreactformat.cpp [ 59%] Built target qchemformat make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake --color= Scanning dependencies of target castepformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 59%] Building CXX object src/formats/CMakeFiles/castepformat.dir/castepformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcastepformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/castepformat.dir/castepformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/castepformat.cpp [ 59%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dasciiformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/depict/asciipainter.cpp [ 60%] Linking CXX shared module ../../lib/cccformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cccformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/cccformat.so CMakeFiles/cccformat.dir/cccformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 60%] Built target cccformat make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake --color= Scanning dependencies of target lpmdformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 60%] Building CXX object src/formats/CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dlpmdformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/lpmdformat.cpp [ 61%] Linking CXX shared module ../../lib/asciiformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/asciiformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/asciiformat.so CMakeFiles/asciiformat.dir/asciiformat.cpp.o CMakeFiles/asciiformat.dir/__/depict/asciipainter.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 61%] Built target asciiformat make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake --color= Scanning dependencies of target APIInterface make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 61%] Building CXX object src/formats/CMakeFiles/APIInterface.dir/APIInterface.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DAPIInterface_EXPORTS -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/APIInterface.dir/APIInterface.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/APIInterface.cpp [ 61%] Linking CXX shared module ../../lib/castepformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/castepformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/castepformat.so CMakeFiles/castepformat.dir/castepformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 61%] Built target castepformat make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake --color= Scanning dependencies of target pointcloudformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 61%] Building CXX object src/formats/CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpointcloudformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/pointcloudformat.cpp [ 61%] Linking CXX shared module ../../lib/APIInterface.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/APIInterface.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/APIInterface.so CMakeFiles/APIInterface.dir/APIInterface.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 61%] Built target APIInterface make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake --color= Scanning dependencies of target MCDLformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 61%] Building CXX object src/formats/CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMCDLformat_EXPORTS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/MCDLformat.cpp [ 61%] Linking CXX shared module ../../lib/pointcloudformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pointcloudformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/pointcloudformat.so CMakeFiles/pointcloudformat.dir/pointcloudformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 61%] Built target pointcloudformat make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake --color= Scanning dependencies of target alchemyformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 61%] Building CXX object src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dalchemyformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/alchemyformat.cpp /<>/openbabel-3.0.0+dfsg/src/formats/MCDLformat.cpp: In member function ‘std::string OpenBabel::MCDLFormat::constring(int (*)[4], char*)’: /<>/openbabel-3.0.0+dfsg/src/formats/MCDLformat.cpp:214:31: warning: ‘%s’ directive writing up to 99 bytes into a region of size 82 [-Wformat-overflow=] 214 | sprintf(line,"%s%d",semis,icons[j]); | ^~ ~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/MCDLformat.cpp:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 2 and 111 bytes into a destination of size 82 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcmlreactformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xml/xml.cpp [ 61%] Linking CXX shared module ../../lib/lpmdformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lpmdformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/lpmdformat.so CMakeFiles/lpmdformat.dir/lpmdformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 61%] Built target lpmdformat make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake --color= Scanning dependencies of target acrformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 61%] Building CXX object src/formats/CMakeFiles/acrformat.dir/acrformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dacrformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/acrformat.dir/acrformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/acrformat.cpp [ 61%] Linking CXX shared module ../../lib/alchemyformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/alchemyformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/alchemyformat.so CMakeFiles/alchemyformat.dir/alchemyformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 61%] Built target alchemyformat make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake --color= Scanning dependencies of target inchiformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 62%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/inchiformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/inchiformat.dir/inchiformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/inchiformat.cpp [ 62%] Linking CXX shared module ../../lib/cmlreactformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlreactformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/cmlreactformat.so CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.cpp.o CMakeFiles/cmlreactformat.dir/xml/xml.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm -lxml2 ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 62%] Built target cmlreactformat make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= Scanning dependencies of target balstformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 62%] Building CXX object src/formats/CMakeFiles/balstformat.dir/balstformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbalstformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/balstformat.dir/balstformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/balstformat.cpp [ 62%] Linking CXX shared module ../../lib/acrformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acrformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/acrformat.so CMakeFiles/acrformat.dir/acrformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 62%] Built target acrformat make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color= Scanning dependencies of target outformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 62%] Building CXX object src/formats/CMakeFiles/outformat.dir/outformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Doutformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/outformat.dir/outformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/outformat.cpp [ 62%] Linking CXX shared module ../../lib/balstformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/balstformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/balstformat.so CMakeFiles/balstformat.dir/balstformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 62%] Built target balstformat make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake --color= Scanning dependencies of target boxformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 63%] Building CXX object src/formats/CMakeFiles/boxformat.dir/boxformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dboxformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/boxformat.dir/boxformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/boxformat.cpp [ 64%] Linking CXX shared module ../../lib/outformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/outformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/outformat.so CMakeFiles/outformat.dir/outformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 64%] Built target outformat make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake --color= Scanning dependencies of target gamessukformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 65%] Building CXX object src/formats/CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgamessukformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/gamessukformat.cpp [ 65%] Linking CXX shared module ../../lib/boxformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/boxformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/boxformat.so CMakeFiles/boxformat.dir/boxformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 65%] Built target boxformat make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cacheformat.dir/DependInfo.cmake --color= Scanning dependencies of target cacheformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 65%] Building CXX object src/formats/CMakeFiles/cacheformat.dir/cacheformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcacheformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cacheformat.dir/cacheformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/cacheformat.cpp [ 65%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/inchiformat.dir/getinchi.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/getinchi.cpp [ 65%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dinchiformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/ops/unique.cpp [ 66%] Linking CXX shared module ../../lib/cacheformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacheformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/cacheformat.so CMakeFiles/cacheformat.dir/cacheformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 66%] Built target cacheformat make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake --color= Scanning dependencies of target carformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 66%] Building CXX object src/formats/CMakeFiles/carformat.dir/carformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcarformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/carformat.dir/carformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/carformat.cpp [ 66%] Linking CXX shared module ../../lib/inchiformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/inchiformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/inchiformat.so CMakeFiles/inchiformat.dir/inchiformat.cpp.o CMakeFiles/inchiformat.dir/getinchi.cpp.o CMakeFiles/inchiformat.dir/__/ops/unique.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 66%] Built target inchiformat make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake --color= Scanning dependencies of target chem3dformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 66%] Building CXX object src/formats/CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchem3dformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/chem3dformat.cpp [ 67%] Linking CXX shared module ../../lib/MCDLformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MCDLformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/MCDLformat.so CMakeFiles/MCDLformat.dir/MCDLformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 67%] Built target MCDLformat make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake --color= Scanning dependencies of target chemtoolformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 67%] Building CXX object src/formats/CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dchemtoolformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/chemtoolformat.cpp [ 67%] Linking CXX shared module ../../lib/carformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/carformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/carformat.so CMakeFiles/carformat.dir/carformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 67%] Built target carformat make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake --color= Scanning dependencies of target fhformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 67%] Building CXX object src/formats/CMakeFiles/fhformat.dir/fhformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfhformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fhformat.dir/fhformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/fhformat.cpp [ 68%] Linking CXX shared module ../../lib/chem3dformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chem3dformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/chem3dformat.so CMakeFiles/chem3dformat.dir/chem3dformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 68%] Linking CXX shared module ../../lib/chemtoolformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemtoolformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/chemtoolformat.so CMakeFiles/chemtoolformat.dir/chemtoolformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 68%] Built target chem3dformat make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/xtcformat.dir/DependInfo.cmake --color= Scanning dependencies of target xtcformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 68%] Building CXX object src/formats/CMakeFiles/xtcformat.dir/xtcformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dxtcformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/xtcformat.dir/xtcformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/xtcformat.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 68%] Built target chemtoolformat make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake --color= Scanning dependencies of target painterformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 68%] Building CXX object src/formats/CMakeFiles/painterformat.dir/painterformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpainterformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/painterformat.dir/painterformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/painterformat.cpp [ 69%] Linking CXX shared module ../../lib/fhformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/fhformat.so CMakeFiles/fhformat.dir/fhformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 69%] Linking CXX shared module ../../lib/gamessukformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessukformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/gamessukformat.so CMakeFiles/gamessukformat.dir/gamessukformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 69%] Built target fhformat make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake --color= Scanning dependencies of target cifformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Building CXX object src/formats/CMakeFiles/cifformat.dir/cifformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcifformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/cifformat.dir/cifformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/cifformat.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Built target gamessukformat make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake --color= Scanning dependencies of target crkformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Building CXX object src/formats/CMakeFiles/crkformat.dir/crkformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dcrkformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/crkformat.dir/crkformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/crkformat.cpp [ 70%] Building CXX object src/formats/CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpainterformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/depict/commandpainter.cpp [ 70%] Linking CXX shared module ../../lib/xtcformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtcformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/xtcformat.so CMakeFiles/xtcformat.dir/xtcformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Built target xtcformat make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake --color= Scanning dependencies of target fastsearchformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Building CXX object src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfastsearchformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/fastsearchformat.cpp [ 70%] Linking CXX shared module ../../lib/painterformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/painterformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/painterformat.so CMakeFiles/painterformat.dir/painterformat.cpp.o CMakeFiles/painterformat.dir/__/depict/commandpainter.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Built target painterformat make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake --color= Scanning dependencies of target fingerprintformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Building CXX object src/formats/CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfingerprintformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/fingerprintformat.cpp [ 70%] Linking CXX shared module ../../lib/crkformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crkformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/crkformat.so CMakeFiles/crkformat.dir/crkformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Built target crkformat make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake --color= Scanning dependencies of target freefracformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Building CXX object src/formats/CMakeFiles/freefracformat.dir/freefracformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfreefracformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/freefracformat.dir/freefracformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/freefracformat.cpp [ 70%] Linking CXX shared module ../../lib/fingerprintformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fingerprintformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/fingerprintformat.so CMakeFiles/fingerprintformat.dir/fingerprintformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Built target fingerprintformat make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color= Scanning dependencies of target pcmodelformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Building CXX object src/formats/CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpcmodelformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/pcmodelformat.cpp [ 70%] Linking CXX shared module ../../lib/freefracformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/freefracformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/freefracformat.so CMakeFiles/freefracformat.dir/freefracformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Built target freefracformat make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake --color= Scanning dependencies of target fchkformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 71%] Building CXX object src/formats/CMakeFiles/fchkformat.dir/fchkformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfchkformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/fchkformat.dir/fchkformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/fchkformat.cpp [ 71%] Linking CXX shared module ../../lib/fastsearchformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastsearchformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/fastsearchformat.so CMakeFiles/fastsearchformat.dir/fastsearchformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 71%] Built target fastsearchformat make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake --color= Scanning dependencies of target groformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 71%] Building CXX object src/formats/CMakeFiles/groformat.dir/groformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgroformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/groformat.dir/groformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/groformat.cpp [ 72%] Linking CXX shared module ../../lib/pcmodelformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pcmodelformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/pcmodelformat.so CMakeFiles/pcmodelformat.dir/pcmodelformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 72%] Built target pcmodelformat make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake --color= Scanning dependencies of target gaussformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 72%] Building CXX object src/formats/CMakeFiles/gaussformat.dir/gaussformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dgaussformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/gaussformat.dir/gaussformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/gaussformat.cpp [ 73%] Linking CXX shared module ../../lib/groformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/groformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/groformat.so CMakeFiles/groformat.dir/groformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 73%] Linking CXX shared module ../../lib/cifformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cifformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/cifformat.so CMakeFiles/cifformat.dir/cifformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 73%] Built target groformat make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake --color= Scanning dependencies of target lmpdatformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 73%] Building CXX object src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dlmpdatformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp [ 73%] Linking CXX shared module ../../lib/fchkformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fchkformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/fchkformat.so CMakeFiles/fchkformat.dir/fchkformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 73%] Built target cifformat make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake --color= Scanning dependencies of target featformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 73%] Building CXX object src/formats/CMakeFiles/featformat.dir/featformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dfeatformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/featformat.dir/featformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/featformat.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 73%] Built target fchkformat make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake --color= Scanning dependencies of target mdffformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 73%] Building CXX object src/formats/CMakeFiles/mdffformat.dir/mdffformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmdffformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mdffformat.dir/mdffformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/mdffformat.cpp [ 73%] Linking CXX shared module ../../lib/featformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/featformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/featformat.so CMakeFiles/featformat.dir/featformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 73%] Built target featformat make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake --color= Scanning dependencies of target mmcifformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 74%] Building CXX object src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmmcifformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/mmcifformat.cpp /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp: In member function ‘virtual bool OpenBabel::LMPDATFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)’: /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp:534:38: warning: ‘%11s’ directive output may be truncated writing between 11 and 32767 bytes into a region of size between 32695 and 32736 [-Wformat-truncation=] 534 | "%-4d %4d %4d %4d %4d %4d # %11s\n", | ^~~~ ...... 541 | DihedralString); | ~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp:15: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 45 and 32842 bytes into a destination of size 32768 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp:516:38: warning: ‘%11s’ directive output may be truncated writing between 11 and 32767 bytes into a region of size between 32695 and 32736 [-Wformat-truncation=] 516 | "%-4d %4d %4d %4d %4d %4d # %11s\n", | ^~~~ ...... 523 | DihedralString); | ~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp:15: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 45 and 32842 bytes into a destination of size 32768 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp:474:33: warning: ‘%8s’ directive output may be truncated writing between 8 and 32767 bytes into a region of size between 32707 and 32741 [-Wformat-truncation=] 474 | "%-4d %4d %4d %4d %4d # %8s\n", | ^~~ ...... 480 | AngleString); | ~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp:15: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 37 and 32830 bytes into a destination of size 32768 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp:458:33: warning: ‘%8s’ directive output may be truncated writing between 8 and 32767 bytes into a region of size between 32707 and 32741 [-Wformat-truncation=] 458 | "%-4d %4d %4d %4d %4d # %8s\n", | ^~~ ...... 464 | AngleString); | ~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp:15: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 37 and 32830 bytes into a destination of size 32768 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp:421:29: warning: ‘%5s’ directive output may be truncated writing between 5 and 32767 bytes into a region of size between 32719 and 32746 [-Wformat-truncation=] 421 | "%-4d %4d %4d %4d # %5s\n", | ^~~ ...... 426 | BondString); | ~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp:15: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 29 and 32818 bytes into a destination of size 32768 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp:407:29: warning: ‘%5s’ directive output may be truncated writing between 5 and 32767 bytes into a region of size between 32719 and 32746 [-Wformat-truncation=] 407 | "%-4d %4d %4d %4d # %5s\n", | ^~~ ...... 412 | BondString); | ~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/lmpdatformat.cpp:15: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 29 and 32818 bytes into a destination of size 32768 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Linking CXX shared module ../../lib/lmpdatformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmpdatformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/lmpdatformat.so CMakeFiles/lmpdatformat.dir/lmpdatformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 74%] Built target lmpdatformat make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake --color= Scanning dependencies of target zindoformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 74%] Building CXX object src/formats/CMakeFiles/zindoformat.dir/zindoformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dzindoformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/zindoformat.dir/zindoformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/zindoformat.cpp [ 74%] Linking CXX shared module ../../lib/mdffformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdffformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/mdffformat.so CMakeFiles/mdffformat.dir/mdffformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 75%] Linking CXX shared module ../../lib/gaussformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gaussformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/gaussformat.so CMakeFiles/gaussformat.dir/gaussformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 75%] Built target mdffformat make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' Scanning dependencies of target mmodformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 75%] Built target gaussformat make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/rsmiformat.dir/DependInfo.cmake --color= [ 75%] Building CXX object src/formats/CMakeFiles/mmodformat.dir/mmodformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmmodformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mmodformat.dir/mmodformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/mmodformat.cpp Scanning dependencies of target rsmiformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 75%] Building CXX object src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Drsmiformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/rsmiformat.cpp [ 76%] Linking CXX shared module ../../lib/zindoformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/zindoformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/zindoformat.so CMakeFiles/zindoformat.dir/zindoformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 76%] Built target zindoformat make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake --color= Scanning dependencies of target moldenformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 76%] Building CXX object src/formats/CMakeFiles/moldenformat.dir/moldenformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmoldenformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/moldenformat.dir/moldenformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/moldenformat.cpp [ 76%] Linking CXX shared module ../../lib/mmcifformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmcifformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/mmcifformat.so CMakeFiles/mmcifformat.dir/mmcifformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 76%] Linking CXX shared module ../../lib/mmodformat.so make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmodformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/mmodformat.so CMakeFiles/mmodformat.dir/mmodformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 76%] Built target mmcifformat make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake --color= Scanning dependencies of target mpdformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 76%] Building CXX object src/formats/CMakeFiles/mpdformat.dir/mpdformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmpdformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mpdformat.dir/mpdformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/mpdformat.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 76%] Built target mmodformat make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake --color= Scanning dependencies of target mpqcformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 77%] Building CXX object src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmpqcformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/mpqcformat.cpp [ 77%] Linking CXX shared module ../../lib/rsmiformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rsmiformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/rsmiformat.so CMakeFiles/rsmiformat.dir/rsmiformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 77%] Built target rsmiformat make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake --color= Scanning dependencies of target orcaformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 77%] Building CXX object src/formats/CMakeFiles/orcaformat.dir/orcaformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dorcaformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/orcaformat.dir/orcaformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/orcaformat.cpp [ 77%] Linking CXX shared module ../../lib/mpdformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpdformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/mpdformat.so CMakeFiles/mpdformat.dir/mpdformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 77%] Linking CXX shared module ../../lib/mpqcformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpqcformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/mpqcformat.so CMakeFiles/mpqcformat.dir/mpqcformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 77%] Built target mpdformat make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake --color= Scanning dependencies of target msmsformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 77%] Building CXX object src/formats/CMakeFiles/msmsformat.dir/msmsformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmsmsformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/msmsformat.dir/msmsformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/msmsformat.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 77%] Built target mpqcformat make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake --color= Scanning dependencies of target pdbqtformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 77%] Building CXX object src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dpdbqtformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/pdbqtformat.cpp [ 77%] Linking CXX shared module ../../lib/moldenformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldenformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/moldenformat.so CMakeFiles/moldenformat.dir/moldenformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 77%] Built target moldenformat make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake --color= Scanning dependencies of target molproformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 77%] Building CXX object src/formats/CMakeFiles/molproformat.dir/molproformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dmolproformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/molproformat.dir/molproformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/molproformat.cpp [ 77%] Linking CXX shared module ../../lib/msmsformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msmsformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/msmsformat.so CMakeFiles/msmsformat.dir/msmsformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 77%] Built target msmsformat make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake --color= Scanning dependencies of target posformat make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 77%] Building CXX object src/formats/CMakeFiles/posformat.dir/posformat.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dposformat_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/cairo -I/<>/openbabel-3.0.0+dfsg/include/inchi -I/usr/include/libxml2 -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/posformat.dir/posformat.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/posformat.cpp /<>/openbabel-3.0.0+dfsg/src/formats/pdbqtformat.cpp: In function ‘void OpenBabel::OutputAtom(OpenBabel::OBAtom*, std::ostream&, unsigned int)’: /<>/openbabel-3.0.0+dfsg/src/formats/pdbqtformat.cpp:345:52: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 345 | snprintf(type_name, sizeof(type_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/pdbqtformat.cpp:24: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 5 and 11 bytes into a destination of size 10 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/src/formats/pdbqtformat.cpp:363:60: warning: ‘__builtin___snprintf_chk’ output may be truncated before the last format character [-Wformat-truncation=] 363 | snprintf(padded_name, sizeof(padded_name), " %-3s", tmp); | ^ In file included from /usr/include/stdio.h:867, from /usr/include/c++/9/cstdio:42, from /usr/include/c++/9/ext/string_conversions.h:43, from /usr/include/c++/9/bits/basic_string.h:6493, from /usr/include/c++/9/string:55, from /usr/include/c++/9/bits/locale_classes.h:40, from /usr/include/c++/9/bits/ios_base.h:41, from /usr/include/c++/9/ios:42, from /usr/include/c++/9/ostream:38, from /usr/include/c++/9/iostream:39, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obconversion.h:24, from /<>/openbabel-3.0.0+dfsg/include/openbabel/obmolecformat.h:36, from /<>/openbabel-3.0.0+dfsg/src/formats/pdbqtformat.cpp:24: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 5 and 11 bytes into a destination of size 10 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 78%] Linking CXX shared module ../../lib/posformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/posformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/posformat.so CMakeFiles/posformat.dir/posformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system [ 78%] Linking CXX shared module ../../lib/molproformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molproformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/molproformat.so CMakeFiles/molproformat.dir/molproformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 78%] Built target posformat make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake --color= Scanning dependencies of target obrotamer make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 78%] Building CXX object tools/CMakeFiles/obrotamer.dir/obrotamer.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obrotamer.dir/obrotamer.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obrotamer.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 78%] Built target molproformat make -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obmm.dir/DependInfo.cmake --color= Scanning dependencies of target obmm make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 79%] Building CXX object tools/CMakeFiles/obmm.dir/obmm.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obmm.dir/obmm.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obmm.cpp [ 79%] Linking CXX shared module ../../lib/orcaformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/orcaformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/orcaformat.so CMakeFiles/orcaformat.dir/orcaformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 79%] Built target orcaformat make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obprobe.dir/DependInfo.cmake --color= Scanning dependencies of target obprobe make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 79%] Building CXX object tools/CMakeFiles/obprobe.dir/obprobe.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obprobe.dir/obprobe.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obprobe.cpp [ 79%] Linking CXX executable ../bin/obrotamer cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotamer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obrotamer.dir/obrotamer.cpp.o -o ../bin/obrotamer ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 79%] Built target obrotamer make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obgen.dir/DependInfo.cmake --color= Scanning dependencies of target obgen make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Building CXX object tools/CMakeFiles/obgen.dir/obgen.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgen.dir/obgen.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obgen.cpp [ 80%] Linking CXX executable ../bin/obmm cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obmm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obmm.dir/obmm.cpp.o -o ../bin/obmm ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Built target obmm make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obprop.dir/DependInfo.cmake --color= Scanning dependencies of target obprop make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Building CXX object tools/CMakeFiles/obprop.dir/obprop.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obprop.dir/obprop.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obprop.cpp [ 80%] Linking CXX executable ../bin/obprobe cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprobe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obprobe.dir/obprobe.cpp.o -o ../bin/obprobe ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Built target obprobe make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obabel.dir/DependInfo.cmake --color= Scanning dependencies of target obabel make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Building CXX object tools/CMakeFiles/obabel.dir/obabel.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obabel.dir/obabel.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obabel.cpp [ 80%] Linking CXX shared module ../../lib/pdbqtformat.so cd /<>/openbabel-3.0.0+dfsg/builddir/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbqtformat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../../lib/pdbqtformat.so CMakeFiles/pdbqtformat.dir/pdbqtformat.cpp.o -lmaeparser -lm -ldl -lz -lcairo libinchi/libinchi.a -lm ../../lib/libopenbabel.so.6.0.0 -lcairo -lc -lm -lmaeparser -lm -ldl -lz -lboost_system /<>/openbabel-3.0.0+dfsg/tools/obabel.cpp:104:29: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 104 | << __DATE__ << " -- " << __TIME__ << endl; | ^~~~~~~~ /<>/openbabel-3.0.0+dfsg/tools/obabel.cpp:104:51: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 104 | << __DATE__ << " -- " << __TIME__ << endl; | ^~~~~~~~ /<>/openbabel-3.0.0+dfsg/tools/obabel.cpp:417:55: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 417 | cout << "Open Babel " << BABEL_VERSION << " -- " << __DATE__ << " -- " | ^~~~~~~~ /<>/openbabel-3.0.0+dfsg/tools/obabel.cpp:418:11: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 418 | << __TIME__ << endl; | ^~~~~~~~ make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Built target pdbqtformat make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obthermo.dir/DependInfo.cmake --color= Scanning dependencies of target obthermo make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Building CXX object tools/CMakeFiles/obthermo.dir/obthermo.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obthermo.dir/obthermo.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obthermo.cpp [ 80%] Linking CXX executable ../bin/obgen cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgen.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obgen.dir/obgen.cpp.o -o ../bin/obgen ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Built target obgen make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obconformer.dir/DependInfo.cmake --color= Scanning dependencies of target obconformer make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Building CXX object tools/CMakeFiles/obconformer.dir/obconformer.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obconformer.dir/obconformer.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obconformer.cpp [ 80%] Linking CXX executable ../bin/obprop cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprop.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obprop.dir/obprop.cpp.o -o ../bin/obprop ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system [ 80%] Linking CXX executable ../bin/obthermo cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obthermo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obthermo.dir/obthermo.cpp.o -o ../bin/obthermo ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Built target obprop make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obsym.dir/DependInfo.cmake --color= Scanning dependencies of target obsym make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Building CXX object tools/CMakeFiles/obsym.dir/obsym.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obsym.dir/obsym.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obsym.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Built target obthermo make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obminimize.dir/DependInfo.cmake --color= Scanning dependencies of target obminimize make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 80%] Building CXX object tools/CMakeFiles/obminimize.dir/obminimize.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obminimize.dir/obminimize.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obminimize.cpp [ 81%] Linking CXX executable ../bin/obabel cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obabel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obabel.dir/obabel.cpp.o -o ../bin/obabel ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 81%] Built target obabel make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake --color= Scanning dependencies of target obspectrophore make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 81%] Building CXX object tools/CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obspectrophore.cpp [ 81%] Linking CXX executable ../bin/obsym cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obsym.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obsym.dir/obsym.cpp.o -o ../bin/obsym ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 81%] Built target obsym make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obenergy.dir/DependInfo.cmake --color= Scanning dependencies of target obenergy make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 82%] Building CXX object tools/CMakeFiles/obenergy.dir/obenergy.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obenergy.dir/obenergy.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obenergy.cpp [ 82%] Linking CXX executable ../bin/obconformer cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obconformer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obconformer.dir/obconformer.cpp.o -o ../bin/obconformer ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system [ 82%] Linking CXX executable ../bin/obminimize cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obminimize.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obminimize.dir/obminimize.cpp.o -o ../bin/obminimize ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 82%] Built target obconformer make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/depend make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obfit.dir/DependInfo.cmake --color= [ 82%] Built target obminimize make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obrms.dir/DependInfo.cmake --color= Scanning dependencies of target obfit make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' Scanning dependencies of target obrms make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/build [ 82%] Building CXX object tools/CMakeFiles/obfit.dir/obfit.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obfit.dir/obfit.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obfit.cpp make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 83%] Building CXX object tools/CMakeFiles/obrms.dir/obrms.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obrms.dir/obrms.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obrms.cpp [ 83%] Linking CXX executable ../bin/obenergy cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obenergy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obenergy.dir/obenergy.cpp.o -o ../bin/obenergy ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 83%] Built target obenergy make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obrotate.dir/DependInfo.cmake --color= Scanning dependencies of target obrotate make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 83%] Building CXX object tools/CMakeFiles/obrotate.dir/obrotate.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obrotate.dir/obrotate.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obrotate.cpp [ 83%] Linking CXX executable ../bin/obspectrophore cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obspectrophore.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obspectrophore.dir/obspectrophore.cpp.o -o ../bin/obspectrophore ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 83%] Built target obspectrophore make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake --color= Scanning dependencies of target obtautomer make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 84%] Building CXX object tools/CMakeFiles/obtautomer.dir/obtautomer.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obtautomer.dir/obtautomer.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obtautomer.cpp [ 84%] Linking CXX executable ../bin/obfit cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfit.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obfit.dir/obfit.cpp.o -o ../bin/obfit ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 84%] Built target obfit make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/DependInfo.cmake --color= Scanning dependencies of target obdistgen make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 84%] Building CXX object tools/CMakeFiles/obdistgen.dir/obdistgen.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obdistgen.dir/obdistgen.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obdistgen.cpp [ 84%] Linking CXX executable ../bin/obrms cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrms.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obrms.dir/obrms.cpp.o -o ../bin/obrms ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 84%] Built target obrms make -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obfitall.dir/DependInfo.cmake --color= Scanning dependencies of target obfitall make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 84%] Building CXX object tools/CMakeFiles/obfitall.dir/obfitall.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obfitall.dir/obfitall.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obfitall.cpp [ 84%] Linking CXX executable ../bin/obtautomer cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obtautomer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obtautomer.dir/obtautomer.cpp.o -o ../bin/obtautomer ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 84%] Built target obtautomer make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obgrep.dir/DependInfo.cmake --color= Scanning dependencies of target obgrep make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 85%] Linking CXX executable ../bin/obrotate cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotate.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obrotate.dir/obrotate.cpp.o -o ../bin/obrotate ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system [ 85%] Building CXX object tools/CMakeFiles/obgrep.dir/obgrep.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgrep.dir/obgrep.cpp.o -c /<>/openbabel-3.0.0+dfsg/tools/obgrep.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 85%] Built target obrotate make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/GUI /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/GUI /<>/openbabel-3.0.0+dfsg/builddir/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake --color= Scanning dependencies of target obgui make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 85%] Building CXX object src/GUI/CMakeFiles/obgui.dir/OBGUI.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/src/GUI/. -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgui.dir/OBGUI.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/GUI/OBGUI.cpp [ 85%] Linking CXX executable ../bin/obgrep cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgrep.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obgrep.dir/obgrep.cpp.o -o ../bin/obgrep ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 85%] Built target obgrep make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/test /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/test /<>/openbabel-3.0.0+dfsg/builddir/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake --color= Scanning dependencies of target test_inchiwrite make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 85%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o [ 85%] Linking CXX executable ../bin/obdistgen cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/inchiwrite.cpp cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obdistgen.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obdistgen.dir/obdistgen.cpp.o -o ../bin/obdistgen ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system [ 85%] Linking CXX executable ../bin/obfitall cd /<>/openbabel-3.0.0+dfsg/builddir/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfitall.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obfitall.dir/obfitall.cpp.o -o ../bin/obfitall ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 85%] Built target obdistgen make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/test /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/test /<>/openbabel-3.0.0+dfsg/builddir/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= Scanning dependencies of target roundtrip make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 85%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/roundtrip.dir/roundtrip.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/roundtrip.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 85%] Built target obfitall make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/test /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/test /<>/openbabel-3.0.0+dfsg/builddir/test/CMakeFiles/test_runner.dir/DependInfo.cmake --color= Scanning dependencies of target test_runner make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 85%] Building CXX object test/CMakeFiles/test_runner.dir/test_runner.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/test_runner.cpp.o -c /<>/openbabel-3.0.0+dfsg/builddir/test/test_runner.cpp [ 85%] Building CXX object test/CMakeFiles/test_runner.dir/aligntest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/aligntest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/aligntest.cpp [ 85%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/formats/getinchi.cpp [ 85%] Linking CXX executable ../bin/roundtrip cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/roundtrip.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/roundtrip.dir/roundtrip.cpp.o -o ../bin/roundtrip ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system [ 86%] Linking CXX executable ../bin/test_inchiwrite cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_inchiwrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/test_inchiwrite.dir/inchiwrite.cpp.o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.cpp.o -o ../bin/test_inchiwrite ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 86%] Built target roundtrip make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/scripts /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/scripts /<>/openbabel-3.0.0+dfsg/builddir/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake --color= Scanning dependencies of target bindings_perl make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 87%] Building CXX object scripts/CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/scripts && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbindings_perl_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/python3.7m -I/usr/lib/aarch64-linux-gnu/perl/5.30/CORE -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o -c /<>/openbabel-3.0.0+dfsg/scripts/perl/openbabel-perl.cpp make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 87%] Built target test_inchiwrite make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/depend make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/scripts /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/scripts /<>/openbabel-3.0.0+dfsg/builddir/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake --color= Scanning dependencies of target bindings_python make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 87%] Building CXX object scripts/CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/scripts && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -Dbindings_python_EXPORTS -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/usr/include/python3.7m -I/usr/lib/aarch64-linux-gnu/perl/5.30/CORE -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIC -std=gnu++11 -o CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o -c /<>/openbabel-3.0.0+dfsg/scripts/python/openbabel/openbabel-python.cpp [ 87%] Building CXX object test/CMakeFiles/test_runner.dir/automorphismtest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/automorphismtest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/automorphismtest.cpp [ 87%] Building CXX object test/CMakeFiles/test_runner.dir/buildertest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/buildertest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/buildertest.cpp [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/canonconsistenttest.cpp [ 89%] Building CXX object src/GUI/CMakeFiles/obgui.dir/stdwx.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/src/GUI/. -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgui.dir/stdwx.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/GUI/stdwx.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/canonfragmenttest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/canonstabletest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/canonstabletest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/canonstabletest.cpp [ 89%] Building CXX object src/GUI/CMakeFiles/obgui.dir/optswx.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/src/GUI/. -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/obgui.dir/optswx.cpp.o -c /<>/openbabel-3.0.0+dfsg/src/GUI/optswx.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/carspacegrouptest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/cifspacegrouptest.cpp [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/cistranstest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/cistranstest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/cistranstest.cpp [ 89%] Linking CXX executable ../../bin/obgui cd /<>/openbabel-3.0.0+dfsg/builddir/src/GUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgui.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/obgui.dir/OBGUI.cpp.o CMakeFiles/obgui.dir/stdwx.cpp.o CMakeFiles/obgui.dir/optswx.cpp.o -o ../../bin/obgui ../../lib/libopenbabel.so.6.0.0 -L/usr/lib/aarch64-linux-gnu -pthread -lwx_baseu-3.0 -lwx_gtk3u_core-3.0 -lwx_gtk3u_adv-3.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 89%] Built target obgui [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/conversiontest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/conversiontest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/conversiontest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/graphsymtest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/graphsymtest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/graphsymtest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/gziptest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/gziptest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/gziptest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/addhtest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/addhtest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/addhtest.cpp [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/implicitHtest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/implicitHtest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/implicitHtest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/lssrtest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/lssrtest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/lssrtest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/isomorphismtest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/isomorphismtest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/isomorphismtest.cpp In file included from /usr/include/string.h:494, from /usr/include/python3.7m/Python.h:30, from /<>/openbabel-3.0.0+dfsg/scripts/python/openbabel/openbabel-python.cpp:177: In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘void SWIG_Python_addvarlink(PyObject*, char*, PyObject* (*)(), int (*)(PyObject*))’ at /<>/openbabel-3.0.0+dfsg/scripts/python/openbabel/openbabel-python.cpp:47922:16: /usr/include/aarch64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/openbabel-3.0.0+dfsg/scripts/python/openbabel/openbabel-python.cpp: In function ‘void SWIG_Python_addvarlink(PyObject*, char*, PyObject* (*)(), int (*)(PyObject*))’: /<>/openbabel-3.0.0+dfsg/scripts/python/openbabel/openbabel-python.cpp:47919:27: note: length computed here 47919 | size_t size = strlen(name)+1; | ~~~~~~^~~~~~ [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/multicmltest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/multicmltest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/multicmltest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/regressionstest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/regressionstest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/regressionstest.cpp [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/rotortest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/rotortest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/rotortest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/shuffletest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/shuffletest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/shuffletest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/smilestest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/smilestest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/smilestest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/spectrophoretest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/spectrophoretest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/spectrophoretest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/squareplanartest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/squareplanartest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/squareplanartest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/stereotest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/stereotest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/stereotest.cpp [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/stereoperceptiontest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tautomertest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/tautomertest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/tautomertest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/tetrahedraltest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/tetranonplanartest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/tetraplanartest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/tetraplanartest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/tetraplanartest.cpp [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/uniqueidtest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/uniqueidtest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/uniqueidtest.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/maereadertest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/maereadertest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/maereadertest.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/aromatest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/aromatest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/aromatest.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/atom.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/atom.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/atom.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/bond.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/bond.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/bond.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/cansmi.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/cansmi.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/cansmi.cpp [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/charge_mmff94.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/charge_mmff94.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/charge_mmff94.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/charge_gasteiger.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/conversion.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/conversion.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/conversion.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/datatest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/datatest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/datatest.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffgaff.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/ffgaff.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/ffgaff.cpp [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/ffghemical.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/ffghemical.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/ffghemical.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffmmff94.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/ffmmff94.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/ffmmff94.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/ffuff.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/ffuff.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/ffuff.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/formalcharge.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/formalcharge.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/formalcharge.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/format.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/format.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/format.cpp [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/formula.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/formula.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/formula.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/internalcoord.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/internalcoord.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/internalcoord.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmarts.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/invalidsmarts.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/invalidsmarts.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmiles.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/invalidsmiles.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/invalidsmiles.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/iterators.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/iterators.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/iterators.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/logp_psa.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/logp_psa.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/logp_psa.cpp [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/math.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/math.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/math.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/mol.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/mol.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/mol.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/pdbreadfile.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/pdbreadfile.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/pdbreadfile.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/phmodel.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/phmodel.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/phmodel.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/residue.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/residue.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/residue.cpp [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/ringtest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/ringtest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/ringtest.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smartstest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/smartstest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/smartstest.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smartsparse.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/smartsparse.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/smartsparse.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smilesmatch.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/smilesmatch.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/smilesmatch.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/unitcell.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/unitcell.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/unitcell.cpp [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/cmlreadfile.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/cmlreadfile.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/cmlreadfile.cpp [100%] Building CXX object test/CMakeFiles/test_runner.dir/obtest.cpp.o cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/c++ -DFORMATDIR=\"/<>/openbabel-3.0.0+dfsg/builddir/lib//\" -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_RADPIJSON -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DTESTDATADIR=\"/<>/openbabel-3.0.0+dfsg/test/files/\" -DUSING_DYNAMIC_LIBS -DWXUSINGDLL -D_FILE_OFFSET_BITS=64 -D__WXGTK__ -I/<>/openbabel-3.0.0+dfsg/builddir/include -I/<>/openbabel-3.0.0+dfsg/data -I/<>/openbabel-3.0.0+dfsg/include -I/usr/include/eigen3 -I/usr/include/maeparser -I/<>/openbabel-3.0.0+dfsg/test -isystem /usr/lib/aarch64-linux-gnu/wx/include/gtk3-unicode-3.0 -isystem /usr/include/wx-3.0 -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -fPIE -std=gnu++11 -o CMakeFiles/test_runner.dir/obtest.cpp.o -c /<>/openbabel-3.0.0+dfsg/test/obtest.cpp [100%] Linking CXX executable ../bin/test_runner cd /<>/openbabel-3.0.0+dfsg/builddir/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_runner.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -rdynamic CMakeFiles/test_runner.dir/test_runner.cpp.o CMakeFiles/test_runner.dir/aligntest.cpp.o CMakeFiles/test_runner.dir/automorphismtest.cpp.o CMakeFiles/test_runner.dir/buildertest.cpp.o CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o CMakeFiles/test_runner.dir/canonstabletest.cpp.o CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o CMakeFiles/test_runner.dir/cistranstest.cpp.o CMakeFiles/test_runner.dir/conversiontest.cpp.o CMakeFiles/test_runner.dir/graphsymtest.cpp.o CMakeFiles/test_runner.dir/gziptest.cpp.o CMakeFiles/test_runner.dir/addhtest.cpp.o CMakeFiles/test_runner.dir/implicitHtest.cpp.o CMakeFiles/test_runner.dir/lssrtest.cpp.o CMakeFiles/test_runner.dir/isomorphismtest.cpp.o CMakeFiles/test_runner.dir/multicmltest.cpp.o CMakeFiles/test_runner.dir/regressionstest.cpp.o CMakeFiles/test_runner.dir/rotortest.cpp.o CMakeFiles/test_runner.dir/shuffletest.cpp.o CMakeFiles/test_runner.dir/smilestest.cpp.o CMakeFiles/test_runner.dir/spectrophoretest.cpp.o CMakeFiles/test_runner.dir/squareplanartest.cpp.o CMakeFiles/test_runner.dir/stereotest.cpp.o CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o CMakeFiles/test_runner.dir/tautomertest.cpp.o CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o CMakeFiles/test_runner.dir/tetraplanartest.cpp.o CMakeFiles/test_runner.dir/uniqueidtest.cpp.o CMakeFiles/test_runner.dir/maereadertest.cpp.o CMakeFiles/test_runner.dir/aromatest.cpp.o CMakeFiles/test_runner.dir/atom.cpp.o CMakeFiles/test_runner.dir/bond.cpp.o CMakeFiles/test_runner.dir/cansmi.cpp.o CMakeFiles/test_runner.dir/charge_mmff94.cpp.o CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o CMakeFiles/test_runner.dir/conversion.cpp.o CMakeFiles/test_runner.dir/datatest.cpp.o CMakeFiles/test_runner.dir/ffgaff.cpp.o CMakeFiles/test_runner.dir/ffghemical.cpp.o CMakeFiles/test_runner.dir/ffmmff94.cpp.o CMakeFiles/test_runner.dir/ffuff.cpp.o CMakeFiles/test_runner.dir/formalcharge.cpp.o CMakeFiles/test_runner.dir/format.cpp.o CMakeFiles/test_runner.dir/formula.cpp.o CMakeFiles/test_runner.dir/internalcoord.cpp.o CMakeFiles/test_runner.dir/invalidsmarts.cpp.o CMakeFiles/test_runner.dir/invalidsmiles.cpp.o CMakeFiles/test_runner.dir/iterators.cpp.o CMakeFiles/test_runner.dir/logp_psa.cpp.o CMakeFiles/test_runner.dir/math.cpp.o CMakeFiles/test_runner.dir/mol.cpp.o CMakeFiles/test_runner.dir/pdbreadfile.cpp.o CMakeFiles/test_runner.dir/phmodel.cpp.o CMakeFiles/test_runner.dir/residue.cpp.o CMakeFiles/test_runner.dir/ringtest.cpp.o CMakeFiles/test_runner.dir/smartstest.cpp.o CMakeFiles/test_runner.dir/smartsparse.cpp.o CMakeFiles/test_runner.dir/smilesmatch.cpp.o CMakeFiles/test_runner.dir/unitcell.cpp.o CMakeFiles/test_runner.dir/cmlreadfile.cpp.o CMakeFiles/test_runner.dir/obtest.cpp.o -o ../bin/test_runner ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [100%] Built target test_runner [100%] Linking CXX shared module ../lib/_openbabel.so cd /<>/openbabel-3.0.0+dfsg/builddir/scripts && /usr/bin/cmake -E cmake_link_script CMakeFiles/bindings_python.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../lib/_openbabel.so CMakeFiles/bindings_python.dir/python/openbabel/openbabel-python.cpp.o -lpython3.7m ../lib/libopenbabel.so.6.0.0 -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [100%] Built target bindings_python [100%] Linking CXX shared module ../lib/OpenBabel.so cd /<>/openbabel-3.0.0+dfsg/builddir/scripts && /usr/bin/cmake -E cmake_link_script CMakeFiles/bindings_perl.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/openbabel-3.0.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -pthread -fopenmp -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -o ../lib/OpenBabel.so CMakeFiles/bindings_perl.dir/perl/openbabel-perl.cpp.o /usr/lib/aarch64-linux-gnu/libperl.so.5.30 ../lib/libopenbabel.so.6.0.0 -ldl -lm -lpthread -lc -lcrypt -lmaeparser -lm -ldl -lz -lboost_system make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [100%] Built target bindings_perl make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' /usr/bin/cmake -E cmake_progress_start /<>/openbabel-3.0.0+dfsg/builddir/CMakeFiles 0 make[2]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -C /<>/openbabel-3.0.0+dfsg/builddir docs make[2]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' /usr/bin/cmake -S/<>/openbabel-3.0.0+dfsg -B/<>/openbabel-3.0.0+dfsg/builddir --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 docs make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' /usr/bin/cmake -S/<>/openbabel-3.0.0+dfsg -B/<>/openbabel-3.0.0+dfsg/builddir --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/openbabel-3.0.0+dfsg/builddir/CMakeFiles 0 make -f CMakeFiles/Makefile2 doc/CMakeFiles/docs.dir/all make[4]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f doc/CMakeFiles/docs.dir/build.make doc/CMakeFiles/docs.dir/depend make[5]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/doc /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/doc /<>/openbabel-3.0.0+dfsg/builddir/doc/CMakeFiles/docs.dir/DependInfo.cmake --color= Scanning dependencies of target docs make[5]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f doc/CMakeFiles/docs.dir/build.make doc/CMakeFiles/docs.dir/build make[5]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg && /usr/bin/doxygen /<>/openbabel-3.0.0+dfsg/Doxyfile warning: Tag 'SYMBOL_CACHE_SIZE' at line 336 of file '/<>/openbabel-3.0.0+dfsg/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_SCHEMA' at line 1422 of file '/<>/openbabel-3.0.0+dfsg/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_DTD' at line 1428 of file '/<>/openbabel-3.0.0+dfsg/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 1599 of file '/<>/openbabel-3.0.0+dfsg/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 1620 of file '/<>/openbabel-3.0.0+dfsg/Doxyfile' has become obsolete. 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Otherwise you run the risk that the wrong font is being used for dot generated graphs. /<>/openbabel-3.0.0+dfsg/include/openbabel/rotor.h:595: warning: unbalanced grouping commands /<>/openbabel-3.0.0+dfsg/include/openbabel/stereo/tetraplanar.h:58: warning: multiple use of section label 'Combinations' while adding section, (first occurrence: /<>/openbabel-3.0.0+dfsg/include/openbabel/stereo/tetranonplanar.h, line 60) /<>/openbabel-3.0.0+dfsg/src/confsearch.cpp:351: warning: documented symbol 'int DiverseConfGen' was not declared or defined. /<>/openbabel-3.0.0+dfsg/src/data_utilities.cpp:50: warning: The following parameters of OpenBabel::extract_thermochemistry(OpenBabel::OBMol &mol, bool bVerbose, int *Nsymm, int Nrotbonds, double dbdt, double *temperature, double *DeltaHf0, double *DeltaHfT, double *DeltaGfT, double *DeltaSfT, double *S0T, double *CVT, double *CPT, std::vector< double > &Scomponents, double *ZPVE) are not documented: parameter 'Nrotbonds' parameter 'dbdt' parameter 'CPT' parameter 'ZPVE' /<>/openbabel-3.0.0+dfsg/include/openbabel/data.h:177: warning: argument 'Unnamed' of command @param is not found in the argument list of OBAtomicHeatOfFormationTable::ParseLine(const char *line) /<>/openbabel-3.0.0+dfsg/include/openbabel/data.h:180: warning: The following parameters of OpenBabel::OBAtomicHeatOfFormationTable::ParseLine(const char *line) are not documented: parameter 'line' /<>/openbabel-3.0.0+dfsg/include/openbabel/data.h:181: warning: argument 'dhof1' of command @param is not found in the argument list of OBAtomicHeatOfFormationTable::GetHeatOfFormation(std::string elem, int charge, std::string method, double T, double *dhof0, double *dhofT, double *S0T) /<>/openbabel-3.0.0+dfsg/include/openbabel/data.h:193: warning: The following parameters of OpenBabel::OBAtomicHeatOfFormationTable::GetHeatOfFormation(std::string elem, int charge, std::string method, double T, double *dhof0, double *dhofT, double *S0T) are not documented: parameter 'dhofT' /<>/openbabel-3.0.0+dfsg/include/openbabel/rotamer.h:126: warning: documented empty return type of OpenBabel::OBRotamerList::ExpandConformerList /<>/openbabel-3.0.0+dfsg/include/openbabel/text.h:82: warning: argument 'pos' from the argument list of OpenBabel::OBText::GetText has multiple @param documentation sections /<>/openbabel-3.0.0+dfsg/include/openbabel/text.h:82: warning: argument 'ToInsertOnly' from the argument list of OpenBabel::OBText::GetText has multiple @param documentation sections This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=latex) restricted \write18 enabled. entering extended mode (./_formulas.tex LaTeX2e <2019-10-01> patch level 3 (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2019/10/25 v1.4k Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/dvips.def)))) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty) ! LaTeX Error: File `newunicodechar.sty' not found. Type X to quit or to proceed, or enter new name. (Default extension: sty) Enter file name: ! Emergency stop. l.6 \newunicodechar {⁻}{${}^{-}$}% Superscript minus^^M No pages of output. Transcript written on _formulas.log. error: Problems running latex. Check your installation or look for typos in _formulas.tex and check _formulas.log! dvips: DVI file can't be opened: _formulas.dvi: No such file or directory error: Problems running dvips. Check your installation! make[5]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' Built target docs make[4]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' /usr/bin/cmake -E cmake_progress_start /<>/openbabel-3.0.0+dfsg/builddir/CMakeFiles 0 make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[2]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[1]: Leaving directory '/<>/openbabel-3.0.0+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/<>/openbabel-3.0.0+dfsg' BABEL_LIBDIR=/<>/openbabel-3.0.0+dfsg/builddir/lib \ LD_LIBRARY_PATH=/<>/openbabel-3.0.0+dfsg/builddir/lib \ dh_auto_test cd builddir && make -j4 test ARGS\+=-j4 make[2]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' Running tests... /usr/bin/ctest --force-new-ctest-process -j4 Test project /<>/openbabel-3.0.0+dfsg/builddir Start 1: test_align_1 Start 2: test_align_2 Start 3: test_align_3 Start 4: test_align_4 1/192 Test #1: test_align_1 ..................... Passed 0.02 sec Start 5: test_align_5 2/192 Test #2: test_align_2 ..................... Passed 0.03 sec Start 6: test_automorphism_1 3/192 Test #3: test_align_3 ..................... Passed 0.04 sec Start 7: test_automorphism_2 4/192 Test #7: test_automorphism_2 .............. Passed 0.11 sec Start 8: test_automorphism_3 5/192 Test #8: test_automorphism_3 .............. Passed 0.08 sec Start 9: test_automorphism_4 6/192 Test #4: test_align_4 ..................... Passed 0.25 sec Start 10: test_automorphism_5 7/192 Test #5: test_align_5 ..................... Passed 0.24 sec Start 11: test_automorphism_6 8/192 Test #9: test_automorphism_4 .............. Passed 0.08 sec Start 12: test_automorphism_7 9/192 Test #10: test_automorphism_5 .............. Passed 0.08 sec Start 13: test_automorphism_8 10/192 Test #6: test_automorphism_1 .............. Passed 0.32 sec Start 14: test_automorphism_9 11/192 Test #11: test_automorphism_6 .............. Passed 0.09 sec Start 15: test_automorphism_10 12/192 Test #12: test_automorphism_7 .............. Passed 0.08 sec Start 16: test_builder_1 13/192 Test #13: test_automorphism_8 .............. Passed 0.09 sec Start 17: test_builder_2 14/192 Test #15: test_automorphism_10 ............. Passed 0.08 sec Start 18: test_builder_3 15/192 Test #14: test_automorphism_9 .............. Passed 0.12 sec Start 19: test_builder_4 16/192 Test #18: test_builder_3 ................... Passed 0.26 sec Start 20: test_builder_5 17/192 Test #19: test_builder_4 ................... Passed 0.24 sec Start 21: test_canonconsistent_1 18/192 Test #20: test_builder_5 ................... Passed 0.35 sec Start 22: test_canonconsistent_2 19/192 Test #22: test_canonconsistent_2 ........... Passed 0.10 sec Start 23: test_canonconsistent_3 20/192 Test #23: test_canonconsistent_3 ........... Passed 0.12 sec Start 24: test_canonfragment_1 21/192 Test #21: test_canonconsistent_1 ........... Passed 0.59 sec Start 25: test_canonstable_1 22/192 Test #24: test_canonfragment_1 ............. Passed 0.08 sec Start 26: test_carspacegroup_1 23/192 Test #26: test_carspacegroup_1 ............. Passed 0.10 sec Start 27: test_carspacegroup_2 24/192 Test #27: test_carspacegroup_2 ............. Passed 0.99 sec Start 28: test_carspacegroup_3 25/192 Test #28: test_carspacegroup_3 ............. Passed 1.24 sec Start 29: test_carspacegroup_4 26/192 Test #29: test_carspacegroup_4 ............. Passed 0.95 sec Start 30: test_cifspacegroup_1 27/192 Test #30: test_cifspacegroup_1 ............. Passed 0.87 sec Start 31: test_cifspacegroup_2 28/192 Test #31: test_cifspacegroup_2 ............. Passed 0.93 sec Start 32: test_cifspacegroup_3 29/192 Test #32: test_cifspacegroup_3 ............. Passed 0.01 sec Start 33: test_cifspacegroup_4 30/192 Test #33: test_cifspacegroup_4 ............. Passed 0.86 sec Start 34: test_cifspacegroup_5 31/192 Test #34: test_cifspacegroup_5 ............. Passed 0.93 sec Start 35: test_cifspacegroup_6 32/192 Test #35: test_cifspacegroup_6 ............. Passed 0.85 sec Start 36: test_cifspacegroup_7 33/192 Test #36: test_cifspacegroup_7 ............. Passed 0.92 sec Start 37: test_cifspacegroup_8 34/192 Test #37: test_cifspacegroup_8 ............. Passed 0.99 sec Start 38: test_cifspacegroup_9 35/192 Test #38: test_cifspacegroup_9 ............. Passed 1.08 sec Start 39: test_cifspacegroup_10 36/192 Test #39: test_cifspacegroup_10 ............ Passed 0.87 sec Start 40: test_cifspacegroup_11 37/192 Test #40: test_cifspacegroup_11 ............ Passed 1.05 sec Start 41: test_cifspacegroup_12 38/192 Test #41: test_cifspacegroup_12 ............ Passed 0.88 sec Start 42: test_cistrans_1 39/192 Test #42: test_cistrans_1 .................. Passed 0.02 sec Start 43: test_cistrans_2 40/192 Test #43: test_cistrans_2 .................. Passed 0.02 sec Start 44: test_cistrans_3 41/192 Test #44: test_cistrans_3 .................. Passed 0.01 sec Start 45: test_cistrans_4 42/192 Test #45: test_cistrans_4 .................. Passed 0.01 sec Start 46: test_cistrans_5 43/192 Test #46: test_cistrans_5 .................. Passed 0.01 sec Start 47: test_cistrans_6 44/192 Test #47: test_cistrans_6 .................. Passed 0.07 sec Start 48: test_cistrans_7 45/192 Test #48: test_cistrans_7 .................. Passed 0.07 sec Start 49: test_cistrans_8 46/192 Test #49: test_cistrans_8 .................. Passed 0.07 sec Start 50: test_cistrans_9 47/192 Test #50: test_cistrans_9 .................. Passed 0.13 sec Start 51: test_conversion_1 48/192 Test #51: test_conversion_1 ................ Passed 0.11 sec Start 52: test_graphsym_1 49/192 Test #52: test_graphsym_1 .................. Passed 0.18 sec Start 53: test_graphsym_2 50/192 Test #53: test_graphsym_2 .................. Passed 0.15 sec Start 54: test_graphsym_3 51/192 Test #54: test_graphsym_3 .................. Passed 0.17 sec Start 55: test_graphsym_4 52/192 Test #55: test_graphsym_4 .................. Passed 0.13 sec Start 56: test_graphsym_5 53/192 Test #56: test_graphsym_5 .................. Passed 0.15 sec Start 57: test_gzip_1 54/192 Test #57: test_gzip_1 ...................... Passed 0.71 sec Start 58: test_addh_1 55/192 Test #25: test_canonstable_1 ............... Passed 19.53 sec Start 59: test_implicitH_1 56/192 Test #59: test_implicitH_1 ................. Passed 0.14 sec Start 60: test_lssr_1 57/192 Test #60: test_lssr_1 ...................... Passed 0.31 sec Start 61: test_lssr_2 58/192 Test #61: test_lssr_2 ...................... Passed 5.80 sec Start 62: test_lssr_3 59/192 Test #62: test_lssr_3 ...................... Passed 1.85 sec Start 63: test_lssr_4 60/192 Test #63: test_lssr_4 ...................... Passed 2.09 sec Start 64: test_lssr_5 61/192 Test #64: test_lssr_5 ...................... Passed 0.11 sec Start 65: test_isomorphism_1 62/192 Test #65: test_isomorphism_1 ............... Passed 0.08 sec Start 66: test_isomorphism_2 63/192 Test #66: test_isomorphism_2 ............... Passed 0.10 sec Start 67: test_isomorphism_3 64/192 Test #67: test_isomorphism_3 ............... Passed 0.08 sec Start 68: test_isomorphism_4 65/192 Test #68: test_isomorphism_4 ............... Passed 0.17 sec Start 69: test_isomorphism_5 66/192 Test #69: test_isomorphism_5 ............... Passed 0.11 sec Start 70: test_isomorphism_6 67/192 Test #70: test_isomorphism_6 ............... Passed 0.07 sec Start 71: test_isomorphism_7 68/192 Test #71: test_isomorphism_7 ............... Passed 0.08 sec Start 72: test_isomorphism_8 69/192 Test #72: test_isomorphism_8 ............... Passed 0.08 sec Start 73: test_isomorphism_9 70/192 Test #73: test_isomorphism_9 ............... Passed 0.11 sec Start 74: test_multicml_1 71/192 Test #74: test_multicml_1 .................. Passed 0.24 sec Start 75: test_regressions_1 72/192 Test #58: test_addh_1 ...................... Passed 19.22 sec Start 76: test_regressions_221 73/192 Test #17: test_builder_2 ................... Passed 94.66 sec Start 77: test_regressions_222 74/192 Test #77: test_regressions_222 ............. Passed 0.15 sec Start 78: test_regressions_223 75/192 Test #78: test_regressions_223 ............. Passed 0.13 sec Start 79: test_regressions_224 76/192 Test #79: test_regressions_224 ............. Passed 0.12 sec Start 80: test_regressions_225 77/192 Test #80: test_regressions_225 ............. Passed 0.13 sec Start 81: test_regressions_226 78/192 Test #81: test_regressions_226 ............. Passed 0.16 sec Start 82: test_regressions_227 79/192 Test #82: test_regressions_227 ............. Passed 0.10 sec Start 83: test_regressions_228 80/192 Test #83: test_regressions_228 ............. Passed 0.21 sec Start 84: test_regressions_240 81/192 Test #84: test_regressions_240 ............. Passed 0.07 sec Start 85: test_regressions_241 82/192 Test #85: test_regressions_241 ............. Passed 0.08 sec Start 86: test_regressions_242 83/192 Test #86: test_regressions_242 ............. Passed 0.07 sec Start 87: test_rotor_1 84/192 Test #87: test_rotor_1 ..................... Passed 0.02 sec Start 88: test_rotor_2 85/192 Test #88: test_rotor_2 ..................... Passed 0.08 sec Start 89: test_rotor_3 86/192 Test #89: test_rotor_3 ..................... Passed 0.08 sec Start 90: test_rotor_4 87/192 Test #90: test_rotor_4 ..................... Passed 0.27 sec Start 91: test_shuffle_1 88/192 Test #91: test_shuffle_1 ................... Passed 0.90 sec Start 92: test_shuffle_2 89/192 Test #92: test_shuffle_2 ................... Passed 1.09 sec Start 93: test_shuffle_3 90/192 Test #93: test_shuffle_3 ................... Passed 0.30 sec Start 94: test_shuffle_4 91/192 Test #94: test_shuffle_4 ................... Passed 0.13 sec Start 95: test_shuffle_5 92/192 Test #95: test_shuffle_5 ................... Passed 0.28 sec Start 96: test_smiles_1 93/192 Test #96: test_smiles_1 .................... Passed 0.16 sec Start 97: test_smiles_2 94/192 Test #97: test_smiles_2 .................... Passed 0.11 sec Start 98: test_smiles_3 95/192 Test #98: test_smiles_3 .................... Passed 0.15 sec Start 99: test_spectrophore_1 96/192 Test #99: test_spectrophore_1 .............. Passed 1.38 sec Start 100: test_spectrophore_2 97/192 Test #100: test_spectrophore_2 .............. Passed 0.11 sec Start 101: test_spectrophore_3 98/192 Test #101: test_spectrophore_3 .............. Passed 0.10 sec Start 102: test_spectrophore_4 99/192 Test #102: test_spectrophore_4 .............. Passed 0.12 sec Start 103: test_spectrophore_5 100/192 Test #103: test_spectrophore_5 .............. Passed 0.07 sec Start 104: test_squareplanar_1 101/192 Test #104: test_squareplanar_1 .............. Passed 0.03 sec Start 105: test_squareplanar_2 102/192 Test #105: test_squareplanar_2 .............. Passed 0.02 sec Start 106: test_squareplanar_3 103/192 Test #106: test_squareplanar_3 .............. Passed 0.03 sec Start 107: test_squareplanar_4 104/192 Test #107: test_squareplanar_4 .............. Passed 0.03 sec Start 108: test_squareplanar_5 105/192 Test #108: test_squareplanar_5 .............. Passed 0.01 sec Start 109: test_stereo_1 106/192 Test #109: test_stereo_1 .................... Passed 0.03 sec Start 110: test_stereo_2 107/192 Test #110: test_stereo_2 .................... Passed 0.03 sec Start 111: test_stereo_3 108/192 Test #111: test_stereo_3 .................... Passed 0.02 sec Start 112: test_stereo_4 109/192 Test #112: test_stereo_4 .................... Passed 0.03 sec Start 113: test_stereo_5 110/192 Test #113: test_stereo_5 .................... Passed 0.02 sec Start 114: test_stereo_6 111/192 Test #114: test_stereo_6 .................... Passed 0.42 sec Start 115: test_stereoperception_1 112/192 Test #115: test_stereoperception_1 .......... Passed 0.16 sec Start 116: test_stereoperception_2 113/192 Test #116: test_stereoperception_2 .......... Passed 0.09 sec Start 117: test_stereoperception_3 114/192 Test #117: test_stereoperception_3 .......... Passed 0.08 sec Start 118: test_stereoperception_4 115/192 Test #118: test_stereoperception_4 .......... Passed 0.09 sec Start 119: test_tautomer_1 116/192 Test #119: test_tautomer_1 .................. Passed 0.07 sec Start 120: test_tautomer_2 117/192 Test #120: test_tautomer_2 .................. Passed 0.10 sec Start 121: test_tetrahedral_1 118/192 Test #121: test_tetrahedral_1 ............... Passed 0.01 sec Start 122: test_tetrahedral_2 119/192 Test #122: test_tetrahedral_2 ............... Passed 0.01 sec Start 123: test_tetrahedral_3 120/192 Test #123: test_tetrahedral_3 ............... Passed 0.02 sec Start 124: test_tetrahedral_4 121/192 Test #124: test_tetrahedral_4 ............... Passed 0.01 sec Start 125: test_tetrahedral_5 122/192 Test #125: test_tetrahedral_5 ............... Passed 0.01 sec Start 126: test_tetranonplanar_1 123/192 Test #126: test_tetranonplanar_1 ............ Passed 0.01 sec Start 127: test_tetraplanar_1 124/192 Test #127: test_tetraplanar_1 ............... Passed 0.01 sec Start 128: test_uniqueid_1 125/192 Test #128: test_uniqueid_1 .................. Passed 0.01 sec Start 129: test_uniqueid_2 126/192 Test #129: test_uniqueid_2 .................. Passed 0.01 sec Start 130: test_maereader_1 127/192 Test #130: test_maereader_1 ................. Passed 0.08 sec Start 131: test_maereader_2 128/192 Test #131: test_maereader_2 ................. Passed 0.08 sec Start 132: test_aromatest_1 129/192 Test #132: test_aromatest_1 ................. Passed 0.08 sec Start 133: test_atom_1 130/192 Test #133: test_atom_1 ...................... Passed 0.01 sec Start 134: test_atom_2 131/192 Test #134: test_atom_2 ...................... Passed 0.01 sec Start 135: test_atom_3 132/192 Test #135: test_atom_3 ...................... Passed 0.01 sec Start 136: test_atom_4 133/192 Test #136: test_atom_4 ...................... Passed 0.01 sec Start 137: test_bond_1 134/192 Test #137: test_bond_1 ...................... Passed 0.01 sec Start 138: test_cansmi_1 135/192 Test #138: test_cansmi_1 .................... Passed 0.74 sec Start 139: test_charge_mmff94_1 136/192 Test #139: test_charge_mmff94_1 ............. Passed 0.32 sec Start 140: test_charge_gasteiger_1 137/192 Test #140: test_charge_gasteiger_1 .......... Passed 0.17 sec Start 141: test_datatest_1 138/192 Test #141: test_datatest_1 .................. Passed 0.02 sec Start 142: test_ffgaff_1 139/192 Test #142: test_ffgaff_1 .................... Passed 2.22 sec Start 143: test_ffghemical_1 140/192 Test #143: test_ffghemical_1 ................ Passed 3.17 sec Start 144: test_ffmmff94_1 141/192 Test #144: test_ffmmff94_1 .................. Passed 65.17 sec Start 145: test_ffmmff94_2 142/192 Test #145: test_ffmmff94_2 .................. Passed 14.16 sec Start 146: test_ffmmff94_3 143/192 Test #16: test_builder_1 ................... Passed 196.75 sec Start 147: test_ffmmff94_4 144/192 Test #147: test_ffmmff94_4 .................. Passed 17.74 sec Start 148: test_ffmmff94_5 145/192 Test #76: test_regressions_221 .............Child aborted***Exception: 212.13 sec terminate called after throwing an instance of 'std::bad_alloc' what(): std::bad_alloc Start 149: test_ffmmff94_6 146/192 Test #149: test_ffmmff94_6 .................. Passed 0.08 sec Start 150: test_ffuff_1 147/192 Test #146: test_ffmmff94_3 .................. Passed 60.80 sec Start 151: test_formalcharge_1 148/192 Test #150: test_ffuff_1 ..................... Passed 1.89 sec Start 152: test_format_1 149/192 Test #152: test_format_1 .................... Passed 0.08 sec Start 153: test_formula_1 150/192 Test #151: test_formalcharge_1 .............. Passed 0.20 sec Start 154: test_internalcoord_1 151/192 Test #154: test_internalcoord_1 ............. Passed 0.02 sec Start 155: test_invalidsmarts_1 152/192 Test #155: test_invalidsmarts_1 ............. Passed 0.04 sec Start 156: test_invalidsmiles_1 153/192 Test #156: test_invalidsmiles_1 ............. Passed 0.01 sec Start 157: test_iterators_1 154/192 Test #153: test_formula_1 ................... Passed 0.16 sec Start 158: test_logp_psa_1 155/192 Test #157: test_iterators_1 ................. Passed 0.15 sec Start 159: test_math_1 156/192 Test #158: test_logp_psa_1 .................. Passed 0.21 sec Start 160: test_math_2 157/192 Test #159: test_math_1 ...................... Passed 0.15 sec Start 161: test_math_3 158/192 Test #160: test_math_2 ...................... Passed 0.08 sec Start 162: test_math_4 159/192 Test #161: test_math_3 ...................... Passed 0.09 sec Start 163: test_mol_1 160/192 Test #162: test_math_4 ...................... Passed 0.08 sec Start 164: test_pdbreadfile_1 161/192 Test #163: test_mol_1 ....................... Passed 0.11 sec Start 165: test_pdbreadfile_2 162/192 Test #165: test_pdbreadfile_2 ............... Passed 0.07 sec Start 166: test_pdbreadfile_3 163/192 Test #164: test_pdbreadfile_1 ............... Passed 0.17 sec Start 167: test_pdbreadfile_4 164/192 Test #166: test_pdbreadfile_3 ............... Passed 0.15 sec Start 168: test_phmodel_1 165/192 Test #167: test_pdbreadfile_4 ............... Passed 0.13 sec Start 169: test_residue_1 166/192 Test #169: test_residue_1 ................... Passed 0.08 sec Start 170: test_ringtest_1 167/192 Test #168: test_phmodel_1 ................... Passed 0.16 sec Start 171: test_smartstest_1 168/192 Test #170: test_ringtest_1 .................. Passed 0.21 sec Start 172: test_smartsparse_1 169/192 Test #172: test_smartsparse_1 ............... Passed 0.09 sec Start 173: test_smilesmatch_1 170/192 Test #171: test_smartstest_1 ................ Passed 0.38 sec Start 174: test_unitcell_1 171/192 Test #174: test_unitcell_1 .................. Passed 0.04 sec Start 175: test_cmlreadfile_1 172/192 Test #175: test_cmlreadfile_1 ............... Passed 0.13 sec Start 176: inchiSamples.sdf_Test 173/192 Test #176: inchiSamples.sdf_Test ............ Passed 0.42 sec Start 177: inchiSamplesTechMan.sdf_Test 174/192 Test #177: inchiSamplesTechMan.sdf_Test ..... Passed 0.29 sec Start 178: inchiSteffen_PubChem.smi_Test 175/192 Test #173: test_smilesmatch_1 ............... Passed 1.07 sec Start 179: pytest_babel 176/192 Test #179: pytest_babel ..................... Passed 10.48 sec Start 180: pytest_sym 177/192 Test #148: test_ffmmff94_5 .................. Passed 64.06 sec Start 181: pytest_smartssym 178/192 Test #181: pytest_smartssym ................. Passed 3.48 sec Start 182: pytest_fastsearch 179/192 Test #182: pytest_fastsearch ................ Passed 0.40 sec Start 183: pytest_unique 180/192 Test #183: pytest_unique .................... Passed 1.12 sec Start 184: pytest_kekule 181/192 Test #184: pytest_kekule .................... Passed 2.37 sec Start 185: pytest_pdbformat 182/192 Test #185: pytest_pdbformat ................. Passed 0.75 sec Start 186: pytest_roundtrip 183/192 Test #75: test_regressions_1 ...............Child aborted***Exception: 392.46 sec terminate called after throwing an instance of 'std::bad_alloc' what(): std::bad_alloc Start 187: pytest_RInChI 184/192 Test #187: pytest_RInChI .................... Passed 3.50 sec Start 188: pybindtest_bindings 185/192 Test #188: pybindtest_bindings ..............***Failed 183.42 sec /<>/openbabel-3.0.0+dfsg/scripts/python:/<>/openbabel-3.0.0+dfsg/builddir/lib ...============================== *** Open Babel Warning in WriteMolecule No 2D or 3D coordinates exist. Stereochemical information will be stored using an Open Babel extension. To generate 2D or 3D coordinates instead use --gen2D or --gen3D. ....============================== *** Open Babel Warning in ParseSmiles Too many greater-than signs in SMILES string ============================== *** Open Babel Warning in ParseSmiles Too many greater-than signs in SMILES string ============================== *** Open Babel Warning in ParseSmiles Too many greater-than signs in SMILES string ============================== *** Open Babel Warning in ParseSmiles Invalid reaction SMILES string: only a single '>' sign found (two required to be valid). ============================== *** Open Babel Warning in ParseSmiles Invalid reaction SMILES string: only a single '>' sign found (two required to be valid). ============================== *** Open Babel Warning in ParseSmiles Invalid reaction SMILES string: only a single '>' sign found (two required to be valid). ..============================== *** Open Babel Warning in IsValid The molecule is not marked as a reaction. Use SetIsReaction(). ============================== *** Open Babel Warning in IsValid Reaction roles should be in the range 0 to 3 inclusive. ============================== *** Open Babel Warning in IsValid Reaction component Ids should all be non-zero positive integers. ============================== *** Open Babel Warning in IsValid The molecule contains an atom that is missing a reaction component Id. Use SetComponentId(). ============================== *** Open Babel Warning in IsValid A reaction component Id has been stored using a data type that is not an OBPairInteger. ============================== *** Open Babel Warning in IsValid The molecule contains a connected component that contains atoms with different reaction component Ids. All atoms in a particular connected component should have the same value. ============================== *** Open Babel Warning in IsValid The molecule contains a connected component that contains atoms with different reaction roles. All atoms in a particular connected component should have the same role. ...........============================== *** Open Babel Warning in ReadMolecule WARNING: Problem interpreting the valence field of an atom The valence field specifies a valence 0 that is less than the observed explicit valence 1. .============================== *** Open Babel Warning in WriteMolecule No 2D or 3D coordinates exist. Stereochemical information will be stored using an Open Babel extension. To generate 2D or 3D coordinates instead use --gen2D or --gen3D. .........============================== *** Open Babel Error in ParseComplex SMILES string contains a character '#' which is invalid ============================== *** Open Babel Error in ParseComplex Element number must be <= 255) ============================== *** Open Babel Error in ParseComplex SMILES string contains a character '#' which is invalid ..============================== *** Open Babel Warning in ParseRingBond Warning: Tetrahedral stereo specified for atom with more than 4 connections. ============================== *** Open Babel Warning in ParseSmiles Failed to kekulize aromatic SMILES ..terminate called after throwing an instance of 'std::bad_alloc' what(): std::bad_alloc CMake Error at pybindtest_bindings.cmake:20 (MESSAGE): Child aborted Start 189: pybindtest__pybel 186/192 Test #189: pybindtest__pybel ................ Passed 46.26 sec Start 190: pybindtest_example 187/192 Test #190: pybindtest_example ............... Passed 0.35 sec Start 191: pybindtest_cdjsonformat 188/192 Test #191: pybindtest_cdjsonformat .......... Passed 0.42 sec Start 192: pybindtest_pcjsonformat 189/192 Test #192: pybindtest_pcjsonformat .......... Passed 0.52 sec 190/192 Test #186: pytest_roundtrip ................. Passed 396.27 sec 191/192 Test #178: inchiSteffen_PubChem.smi_Test ....***Timeout 1500.05 sec ============================== *** Open Babel Warning in InChI code #6 :Accepted unusual valence(s): C(3); ============================== *** Open Babel Warning in InChI code #8 :Salt was disconnected; ============================== *** Open Babel Warning in InChI code #30 :Salt was disconnected; 192/192 Test #180: pytest_sym .......................***Timeout 1500.03 sec /<>/openbabel-3.0.0+dfsg/scripts/python:/<>/openbabel-3.0.0+dfsg/builddir/lib 97% tests passed, 5 tests failed out of 192 Total Test time (real) = 1763.21 sec The following tests FAILED: 75 - test_regressions_1 (Child aborted) 76 - test_regressions_221 (Child aborted) 178 - inchiSteffen_PubChem.smi_Test (Timeout) 180 - pytest_sym (Timeout) 188 - pybindtest_bindings (Failed) Errors while running CTest make[2]: *** [Makefile:133: test] Error 8 make[2]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' dh_auto_test: cd builddir && make -j4 test ARGS\+=-j4 returned exit code 2 make[1]: [debian/rules:60: override_dh_auto_test] Error 255 (ignored) make[1]: Leaving directory '/<>/openbabel-3.0.0+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_prep -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_auto_install -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir cd builddir && make -j4 install DESTDIR=/<>/openbabel-3.0.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' /usr/bin/cmake -S/<>/openbabel-3.0.0+dfsg -B/<>/openbabel-3.0.0+dfsg/builddir --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/openbabel-3.0.0+dfsg/builddir/CMakeFiles /<>/openbabel-3.0.0+dfsg/builddir/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/depend make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats/libinchi /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi /<>/openbabel-3.0.0+dfsg/builddir/src/formats/libinchi/CMakeFiles/inchi.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src /<>/openbabel-3.0.0+dfsg/builddir/src/CMakeFiles/openbabel.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/libinchi/CMakeFiles/inchi.dir/build.make src/formats/libinchi/CMakeFiles/inchi.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/libinchi/CMakeFiles/inchi.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/CMakeFiles/openbabel.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 7%] Built target inchi [ 21%] Built target openbabel make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/depend make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src /<>/openbabel-3.0.0+dfsg/builddir/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src /<>/openbabel-3.0.0+dfsg/builddir/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src /<>/openbabel-3.0.0+dfsg/builddir/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src /<>/openbabel-3.0.0+dfsg/builddir/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/CMakeFiles/plugin_descriptors.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/CMakeFiles/plugin_forcefields.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/CMakeFiles/plugin_ops.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/CMakeFiles/plugin_charges.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 22%] Built target plugin_forcefields [ 23%] Built target plugin_descriptors make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend [ 28%] Built target plugin_ops make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src /<>/openbabel-3.0.0+dfsg/builddir/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake --color= [ 30%] Built target plugin_charges make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cdxmlformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/CMakeFiles/plugin_fingerprints.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pubchem.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/png2format.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 30%] Built target cdxmlformat [ 32%] Built target pubchem [ 32%] Built target plugin_fingerprints make -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/depend make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/rinchiformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake --color= [ 32%] Built target png2format make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/rinchiformat.dir/build.make src/formats/CMakeFiles/rinchiformat.dir/build make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/rinchiformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemdrawcdx.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemkinformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cmlformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 33%] Built target rinchiformat [ 33%] Built target chemkinformat [ 33%] Built target chemdrawcdx make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/depend make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake --color= cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake --color= [ 33%] Built target cmlformat make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/build make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/rxnformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/xyzformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/xedformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/unichemformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 34%] Built target rxnformat [ 35%] Built target xyzformat make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/smileyformat.dir/DependInfo.cmake --color= [ 35%] Built target xedformat [ 35%] Built target unichemformat make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/depend make -f src/formats/CMakeFiles/maeformat.dir/build.make src/formats/CMakeFiles/maeformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/maeformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build make -f src/formats/CMakeFiles/smileyformat.dir/build.make src/formats/CMakeFiles/smileyformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/thermoformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build make[3]: Nothing to be done for 'src/formats/CMakeFiles/smileyformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/maeformat.dir/build.make src/formats/CMakeFiles/maeformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/maeformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/shelxformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 35%] Built target thermoformat [ 35%] Built target smileyformat make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake --color= cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake --color= [ 36%] Built target maeformat [ 36%] Built target shelxformat make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/depend make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/exyzformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/build make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/jaguarformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/exyzformat.dir/build.make src/formats/CMakeFiles/exyzformat.dir/build make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/abinitformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/exyzformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gausscubeformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 37%] Built target jaguarformat make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend [ 38%] Built target exyzformat [ 39%] Built target abinitformat [ 39%] Built target gausscubeformat make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake --color= cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/build make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gamessformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/dmolformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/tinkerformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/xmlformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 40%] Built target gamessformat [ 40%] Built target dmolformat [ 40%] Built target tinkerformat [ 41%] Built target xmlformat make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/depend make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/daltonformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/daltonformat.dir/build.make src/formats/CMakeFiles/daltonformat.dir/build make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/daltonformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pqrformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/crystal09format.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/nwchemformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 42%] Built target daltonformat [ 42%] Built target pqrformat make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/depend [ 43%] Built target crystal09format make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/depend make -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/molreport.dir/DependInfo.cmake --color= cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pubchemjsonformat.dir/DependInfo.cmake --color= [ 43%] Built target nwchemformat make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/build make -f src/formats/CMakeFiles/pubchemjsonformat.dir/build.make src/formats/CMakeFiles/pubchemjsonformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/molreport.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mdlformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pubchemjsonformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/hinformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 44%] Built target mdlformat [ 44%] Built target pubchemjsonformat [ 44%] Built target molreport make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake --color= [ 45%] Built target hinformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/depend cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/build make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mopacformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build make[3]: Nothing to be done for 'src/formats/CMakeFiles/gausszmatformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/copyformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fhiaimsformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Built target mopacformat make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/depend [ 45%] Built target gausszmatformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/depend [ 45%] Built target copyformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cofformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cofformat.dir/build.make src/formats/CMakeFiles/cofformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/turbomoleformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cofformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 45%] Built target fhiaimsformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mol2format.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 46%] Built target turbomoleformat [ 46%] Built target cofformat make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/depend make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/build [ 47%] Built target mol2format make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake --color= make[3]: Nothing to be done for 'src/formats/CMakeFiles/amberformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/build make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/CSRformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/vaspformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 48%] Built target amberformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake --color= make[3]: Nothing to be done for 'src/formats/CMakeFiles/cssrformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 48%] Built target vaspformat [ 48%] Built target CSRformat make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/aoforceformat.dir/DependInfo.cmake --color= [ 48%] Built target cssrformat make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pdbformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/aoforceformat.dir/build.make src/formats/CMakeFiles/aoforceformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pwscfformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/aoforceformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/build [ 48%] Built target pdbformat make -f src/formats/CMakeFiles/chemdoodlejsonformat.dir/build.make src/formats/CMakeFiles/chemdoodlejsonformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/povrayformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/chemdoodlejsonformat.dir/DependInfo.cmake --color= [ 49%] Built target aoforceformat [ 49%] Built target pwscfformat make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/depend make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake --color= cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake --color= [ 49%] Built target povrayformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend make -f src/formats/CMakeFiles/chemdoodlejsonformat.dir/build.make src/formats/CMakeFiles/chemdoodlejsonformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemdoodlejsonformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemdrawct.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/MNAformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 49%] Built target chemdoodlejsonformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/textformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 50%] Built target MNAformat [ 50%] Built target chemdrawct make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/depend make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fastaformat.dir/DependInfo.cmake --color= cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/siestaformat.dir/DependInfo.cmake --color= [ 50%] Built target textformat make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/siestaformat.dir/build.make src/formats/CMakeFiles/siestaformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fastaformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fpsformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/siestaformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build [ 50%] Built target fastaformat [ 52%] Built target fpsformat [ 52%] Built target siestaformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/opendxformat.dir/build'. make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color= cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake --color= [ 52%] Built target opendxformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/viewmolformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cacaoformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/svgformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target cacaoformat [ 53%] Built target viewmolformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target svgformat make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/build make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/depend make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/smilesformat.dir/DependInfo.cmake --color= make[3]: Nothing to be done for 'src/formats/CMakeFiles/dlpolyformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake --color= [ 53%] Built target dlpolyformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/build make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gromos96format.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/xsfformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/smilesformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target gromos96format make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/build [ 53%] Built target xsfformat make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/depend make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/reportformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/yasaraformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake --color= [ 53%] Built target smilesformat make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/stlformat.dir/DependInfo.cmake --color= [ 53%] Built target yasaraformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/build make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/build make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake --color= make[3]: Nothing to be done for 'src/formats/CMakeFiles/reportformat.dir/build'. make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/bgfformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/stlformat.dir/build.make src/formats/CMakeFiles/stlformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/stlformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 53%] Built target bgfformat [ 53%] Built target reportformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/depend make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/confabreport.dir/DependInfo.cmake --color= [ 54%] Built target stlformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color= make[3]: Nothing to be done for 'src/formats/CMakeFiles/ghemicalformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake --color= [ 54%] Built target ghemicalformat make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/confabreport.dir/build.make src/formats/CMakeFiles/confabreport.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/nulformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/msiformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/confabreport.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build [ 56%] Built target msiformat [ 56%] Built target confabreport [ 56%] Built target nulformat make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/PQSformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake --color= [ 56%] Built target PQSformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/build make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/adfformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gulpformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pngformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 57%] Built target gulpformat [ 57%] Built target adfformat make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color= cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake --color= [ 58%] Built target pngformat make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/acesformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake --color= [ 58%] Built target acesformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/qchemformat.dir/build'. make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/titleformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/asciiformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 58%] Built target qchemformat [ 58%] Built target titleformat make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake --color= [ 59%] Built target asciiformat cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cccformat.dir/build'. make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/lpmdformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build [ 60%] Built target cccformat make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cmlreactformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/castepformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/lpmdformat.dir/build.make src/formats/CMakeFiles/lpmdformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/lpmdformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 61%] Built target cmlreactformat make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/build [ 61%] Built target castepformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pointcloudformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend [ 61%] Built target lpmdformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend make[3]: Nothing to be done for 'src/formats/CMakeFiles/APIInterface.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake --color= [ 61%] Built target APIInterface make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/depend make -f src/formats/CMakeFiles/pointcloudformat.dir/build.make src/formats/CMakeFiles/pointcloudformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pointcloudformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/MCDLformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/alchemyformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build [ 61%] Built target pointcloudformat [ 62%] Built target MCDLformat make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/depend make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend [ 62%] Built target alchemyformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/acrformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color= [ 62%] Built target acrformat make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/build make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/inchiformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/balstformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/outformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 63%] Built target inchiformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/build [ 63%] Built target balstformat make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/boxformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 64%] Built target outformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cacheformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake --color= [ 65%] Built target boxformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/depend make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gamessukformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cacheformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/carformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/build [ 66%] Built target gamessukformat [ 67%] Built target cacheformat make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/depend make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chem3dformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake --color= [ 67%] Built target carformat make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/xtcformat.dir/DependInfo.cmake --color= [ 68%] Built target chem3dformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/chemtoolformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fhformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/painterformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/xtcformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 69%] Built target chemtoolformat [ 69%] Built target fhformat make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/painterformat.dir/build.make src/formats/CMakeFiles/painterformat.dir/build make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/painterformat.dir/build'. cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 69%] Built target xtcformat make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 69%] Built target painterformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/build make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/cifformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/crkformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Built target cifformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fastsearchformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fingerprintformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 70%] Built target crkformat make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color= [ 70%] Built target fastsearchformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/build [ 70%] Built target fingerprintformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/freefracformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pcmodelformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/build [ 70%] Built target freefracformat make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/fchkformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/build [ 71%] Built target pcmodelformat make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/groformat.dir/build'. [ 72%] Built target fchkformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/gaussformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build [ 73%] Built target groformat make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/lmpdatformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/depend [ 74%] Built target gaussformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/featformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mdffformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake --color= [ 74%] Built target lmpdatformat [ 74%] Built target featformat make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/depend make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mdffformat.dir/build.make src/formats/CMakeFiles/mdffformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mmcifformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mdffformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/zindoformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mmodformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 75%] Built target mmcifformat make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend [ 75%] Built target mdffformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/rsmiformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake --color= [ 76%] Built target zindoformat make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake --color= [ 76%] Built target mmodformat make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/moldenformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/rsmiformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mpdformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/mpqcformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 76%] Built target moldenformat make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/depend [ 76%] Built target mpdformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/orcaformat.dir/DependInfo.cmake --color= make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake --color= [ 76%] Built target rsmiformat make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/depend [ 77%] Built target mpqcformat make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/orcaformat.dir/build.make src/formats/CMakeFiles/orcaformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/orcaformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/msmsformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/build make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/molproformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/pdbqtformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 77%] Built target msmsformat [ 77%] Built target orcaformat make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/depend make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/formats /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/formats /<>/openbabel-3.0.0+dfsg/builddir/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake --color= [ 77%] Built target molproformat [ 77%] Built target pdbqtformat make -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/depend make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obmm.dir/DependInfo.cmake --color= cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obprobe.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obrotamer.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/formats/CMakeFiles/posformat.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obmm.dir/build.make tools/CMakeFiles/obmm.dir/build make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obmm.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obprobe.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 78%] Built target obrotamer [ 78%] Built target posformat make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/depend make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obgen.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obprop.dir/DependInfo.cmake --color= [ 78%] Built target obprobe [ 79%] Built target obmm make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obabel.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obthermo.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obgen.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obprop.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obthermo.dir/build.make tools/CMakeFiles/obthermo.dir/build [ 80%] Built target obgen make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obabel.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obthermo.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obconformer.dir/DependInfo.cmake --color= [ 80%] Built target obprop make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obsym.dir/DependInfo.cmake --color= [ 81%] Built target obabel [ 81%] Built target obthermo make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/depend make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obminimize.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obsym.dir/build.make tools/CMakeFiles/obsym.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obconformer.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obsym.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/build make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obminimize.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 81%] Built target obsym [ 81%] Built target obconformer make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obspectrophore.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obenergy.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obfit.dir/DependInfo.cmake --color= [ 81%] Built target obminimize make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend [ 81%] Built target obspectrophore make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obrms.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obrotate.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/build make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obenergy.dir/build'. make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obfit.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/build make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 82%] Built target obfit [ 82%] Built target obenergy make[3]: Nothing to be done for 'tools/CMakeFiles/obrms.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obrotate.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/depend make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obtautomer.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obdistgen.dir/DependInfo.cmake --color= [ 84%] Built target obrotate [ 84%] Built target obrms make -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/depend make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obfitall.dir/DependInfo.cmake --color= make -f tools/CMakeFiles/obtautomer.dir/build.make tools/CMakeFiles/obtautomer.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/tools /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/tools /<>/openbabel-3.0.0+dfsg/builddir/tools/CMakeFiles/obgrep.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obtautomer.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obdistgen.dir/build.make tools/CMakeFiles/obdistgen.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obdistgen.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obfitall.dir/build.make tools/CMakeFiles/obfitall.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/build [ 85%] Built target obtautomer make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'tools/CMakeFiles/obfitall.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend make[3]: Nothing to be done for 'tools/CMakeFiles/obgrep.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 85%] Built target obdistgen make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/test /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/test /<>/openbabel-3.0.0+dfsg/builddir/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake --color= cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/src/GUI /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/src/GUI /<>/openbabel-3.0.0+dfsg/builddir/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake --color= [ 85%] Built target obgrep [ 85%] Built target obfitall make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/depend make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/test /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/test /<>/openbabel-3.0.0+dfsg/builddir/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/test /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/test /<>/openbabel-3.0.0+dfsg/builddir/test/CMakeFiles/test_runner.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'test/CMakeFiles/test_inchiwrite.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'src/GUI/CMakeFiles/obgui.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build [ 86%] Built target test_inchiwrite make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'test/CMakeFiles/roundtrip.dir/build'. make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/depend make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f test/CMakeFiles/test_runner.dir/build.make test/CMakeFiles/test_runner.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/scripts /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/scripts /<>/openbabel-3.0.0+dfsg/builddir/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake --color= [ 87%] Built target obgui make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/depend [ 87%] Built target roundtrip make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' cd /<>/openbabel-3.0.0+dfsg/builddir && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/openbabel-3.0.0+dfsg /<>/openbabel-3.0.0+dfsg/scripts /<>/openbabel-3.0.0+dfsg/builddir /<>/openbabel-3.0.0+dfsg/builddir/scripts /<>/openbabel-3.0.0+dfsg/builddir/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'test/CMakeFiles/test_runner.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'scripts/CMakeFiles/bindings_perl.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [ 99%] Built target test_runner make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build [100%] Built target bindings_perl make[3]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[3]: Nothing to be done for 'scripts/CMakeFiles/bindings_python.dir/build'. make[3]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' [100%] Built target bindings_python make[2]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' /usr/bin/cmake -E cmake_progress_start /<>/openbabel-3.0.0+dfsg/builddir/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/openbabel-3.0.0+dfsg/builddir' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/babelconfig.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/pkgconfig/openbabel-3.pc -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/cmake/openbabel3/OpenBabel3_EXPORTS.cmake -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/cmake/openbabel3/OpenBabel3_EXPORTS-none.cmake -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/cmake/openbabel3/OpenBabel3Config.cmake -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/cmake/openbabel3/OpenBabel3ConfigVersion.cmake -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/inchi/inchi_api.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/chemdrawcdx.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/alias.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/atom.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/base.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/bitvec.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/bond.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/bondtyper.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/builder.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/canon.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/chains.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/chargemodel.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/conformersearch.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/data.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/data_utilities.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/descriptor.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/distgeom.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/dlhandler.h -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/include/openbabel3/openbabel/elements.h -- Installing: 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/<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/abinitformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/adfformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/aoforceformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/castepformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/crystal09format.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/daltonformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/dmolformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/fchkformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/fhiaimsformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/gamessformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/gaussformat.so -- Installing: 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/<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/turbomoleformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/vaspformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/xsfformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/zindoformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/maeformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/gamessukformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/orcaformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/APIInterface.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/CSRformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/PQSformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/MCDLformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/alchemyformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/acrformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/amberformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/balstformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/bgfformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/boxformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/cacaoformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/cacheformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/carformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/cccformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/chem3dformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/chemdrawct.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/chemtoolformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/cifformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/cofformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/crkformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/cssrformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/dlpolyformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/exyzformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/fastsearchformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/fastaformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/featformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/fhformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/fingerprintformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/fpsformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/freefracformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/ghemicalformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/gromos96format.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/groformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/lmpdatformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/lpmdformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/mdffformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/mmcifformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/mmodformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/moldenformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/mpdformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/mpqcformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/msiformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/msmsformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/opendxformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/outformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/pcmodelformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/pdbqtformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/pointcloudformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/posformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/pqrformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/shelxformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/smileyformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/stlformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/thermoformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/tinkerformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/unichemformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/viewmolformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/xedformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/xyzformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/yasaraformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/rxnformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/chemdrawcdx.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/chemkinformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/rinchiformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/rsmiformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/xtcformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/png2format.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/cdxmlformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/cmlformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/pubchem.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/xmlformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/cmlreactformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/chemdoodlejsonformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/openbabel/3.0.0/pubchemjsonformat.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/libinchi.a -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obabel -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obconformer -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obenergy -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obfit -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obfitall -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obgen -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obminimize -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obmm -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obprobe -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obprop -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obrotamer -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obrotate -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obsym -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obtautomer -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obthermo -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obdistgen -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obgrep -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obspectrophore -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obrms -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/obgui -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/bin/roundtrip -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/openbabel/_openbabel.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/openbabel/__init__.py -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/openbabel/openbabel.py -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/python3.7/dist-packages/openbabel/pybel.py -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/auto/Chemistry/OpenBabel/OpenBabel.so -- Installing: /<>/openbabel-3.0.0+dfsg/debian/tmp/usr/lib/Chemistry/OpenBabel.pm make[1]: Leaving directory '/<>/openbabel-3.0.0+dfsg/builddir' debian/rules override_dh_install make[1]: Entering directory '/<>/openbabel-3.0.0+dfsg' dh_install -Nlibchemistry-openbabel-perl dh_missing --list-missing -Nlibchemistry-openbabel-perl dh_missing: usr/share/man/man1/roundtrip.1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/bin/roundtrip exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/libinchi.a exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/auto/Chemistry/OpenBabel/OpenBabel.so exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/cmake/openbabel3/OpenBabel3_EXPORTS.cmake exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/cmake/openbabel3/OpenBabel3ConfigVersion.cmake exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/cmake/openbabel3/OpenBabel3Config.cmake exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/cmake/openbabel3/OpenBabel3_EXPORTS-none.cmake exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/Chemistry/OpenBabel.pm exists in debian/tmp but is not installed to anywhere dh_missing: usr/include/inchi/inchi_api.h exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libchemistry-openbabel-perl (0), libopenbabel-dev (3), libopenbabel-doc (0), libopenbabel6 (130), openbabel (39), openbabel-gui (2), python3-openbabel (1) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed mkdir -p /<>/openbabel-3.0.0+dfsg/debian/tmp//usr/lib/aarch64-linux-gnu/perl5/5.30 mv debian/tmp/usr/lib/auto debian/tmp/usr/lib/Chemistry \ /<>/openbabel-3.0.0+dfsg/debian/tmp//usr/lib/aarch64-linux-gnu/perl5/5.30 dh_install -plibchemistry-openbabel-perl -Xperllocal.pod --autodest /usr/lib/aarch64-linux-gnu/perl5/5.30 dh_missing --list-missing -plibchemistry-openbabel-perl -Xperllocal.pod dh_missing: usr/share/man/man1/roundtrip.1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/bin/roundtrip exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/libinchi.a exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/cmake/openbabel3/OpenBabel3_EXPORTS.cmake exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/cmake/openbabel3/OpenBabel3ConfigVersion.cmake exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/cmake/openbabel3/OpenBabel3Config.cmake exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/cmake/openbabel3/OpenBabel3_EXPORTS-none.cmake exists in debian/tmp but is not installed to anywhere dh_missing: usr/include/inchi/inchi_api.h exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libchemistry-openbabel-perl (1), libopenbabel-dev (4), libopenbabel-doc (0), libopenbabel6 (131), openbabel (39), openbabel-gui (2), python3-openbabel (1) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed make[1]: Leaving directory '/<>/openbabel-3.0.0+dfsg' debian/rules override_dh_installdocs make[1]: Entering directory '/<>/openbabel-3.0.0+dfsg' dh_installdocs -X.js make[1]: Leaving directory '/<>/openbabel-3.0.0+dfsg' dh_installchangelogs -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir debian/rules override_dh_installexamples make[1]: Entering directory '/<>/openbabel-3.0.0+dfsg' dh_installexamples -X.pyc make[1]: Leaving directory '/<>/openbabel-3.0.0+dfsg' dh_installman -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_python3 -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir I: dh_python3 fs:343: renaming _openbabel.so to _openbabel.cpython-37m-aarch64-linux-gnu.so dh_installinit -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_installsystemduser -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_perl -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_link -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_strip_nondeterminism -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir debian/rules override_dh_compress make[1]: Entering directory '/<>/openbabel-3.0.0+dfsg' dh_compress -Xusr/share/doc/libopenbabel-doc/html/ \ -Xusr/share/doc/python3-openbabel/examples make[1]: Leaving directory '/<>/openbabel-3.0.0+dfsg' dh_fixperms -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_missing -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_missing: usr/share/man/man1/roundtrip.1 exists in debian/tmp but is not installed to anywhere dh_missing: usr/bin/roundtrip exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/libinchi.a exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/cmake/openbabel3/OpenBabel3_EXPORTS.cmake exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/cmake/openbabel3/OpenBabel3ConfigVersion.cmake exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/cmake/openbabel3/OpenBabel3Config.cmake exists in debian/tmp but is not installed to anywhere dh_missing: usr/lib/cmake/openbabel3/OpenBabel3_EXPORTS-none.cmake exists in debian/tmp but is not installed to anywhere dh_missing: usr/include/inchi/inchi_api.h exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libchemistry-openbabel-perl (1), libopenbabel-dev (4), libopenbabel-doc (0), libopenbabel6 (131), openbabel (39), openbabel-gui (2), python3-openbabel (1) * dh_installdocs: libchemistry-openbabel-perl (0), libopenbabel-dev (0), libopenbabel-doc (1), libopenbabel6 (0), openbabel (3), openbabel-gui (0), python3-openbabel (2) * dh_installexamples: libchemistry-openbabel-perl (0), libopenbabel-dev (0), libopenbabel-doc (0), libopenbabel6 (0), openbabel (1), openbabel-gui (0), python3-openbabel (10) * dh_installman: libchemistry-openbabel-perl (0), libopenbabel-dev (0), libopenbabel-doc (0), libopenbabel6 (0), openbabel (0), openbabel-gui (0), python3-openbabel (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed dh_dwz -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir debian/rules override_dh_strip make[1]: Entering directory '/<>/openbabel-3.0.0+dfsg' dh_strip --dbgsym-migration='openbabel-dbg (<< 3.0.0+dfsg)' make[1]: Leaving directory '/<>/openbabel-3.0.0+dfsg' dh_makeshlibs -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_shlibdeps -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_installdeb -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_gencontrol -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dpkg-gencontrol: warning: package python3-openbabel: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-openbabel: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir dh_builddeb -a -O--builddirectory=/<>/openbabel-3.0.0\+dfsg/builddir INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing libchemistry-openbabel-perl (in debian/libchemistry-openbabel-perl); do_strip: , oemstrip: pkgstriptranslations: processing libopenbabel6-dbgsym (in debian/.debhelper/libopenbabel6/dbgsym-root); do_strip: , oemstrip: INFO: pkgstriptranslations version 144 pkgstriptranslations: processing openbabel (in debian/openbabel); do_strip: , oemstrip: pkgstriptranslations: processing openbabel-gui-dbgsym (in debian/.debhelper/openbabel-gui/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/libopenbabel6/dbgsym-root/DEBIAN/control, package libopenbabel6-dbgsym, directory debian/.debhelper/libopenbabel6/dbgsym-root dpkg-deb: building package 'libopenbabel6-dbgsym' in 'debian/.debhelper/scratch-space/build-libopenbabel6/libopenbabel6-dbgsym_3.0.0+dfsg-2_arm64.deb'. pkgstripfiles: processing control file: debian/libchemistry-openbabel-perl/DEBIAN/control, package libchemistry-openbabel-perl, directory debian/libchemistry-openbabel-perl INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... pkgstripfiles: processing control file: debian/.debhelper/openbabel-gui/dbgsym-root/DEBIAN/control, package openbabel-gui-dbgsym, directory debian/.debhelper/openbabel-gui/dbgsym-root dpkg-deb: building package 'openbabel-gui-dbgsym' in 'debian/.debhelper/scratch-space/build-openbabel-gui/openbabel-gui-dbgsym_3.0.0+dfsg-2_arm64.deb'. Renaming openbabel-gui-dbgsym_3.0.0+dfsg-2_arm64.deb to openbabel-gui-dbgsym_3.0.0+dfsg-2_arm64.ddeb INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstriptranslations version 144 pkgstriptranslations: processing libopenbabel-dev (in debian/libopenbabel-dev); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libopenbabel-dev/DEBIAN/control, package libopenbabel-dev, directory debian/libopenbabel-dev INFO: pkgstripfiles: waiting for lock (libopenbabel-dev) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libopenbabel-dev) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " INFO: pkgstripfiles: waiting for lock (libopenbabel-dev) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... pkgstripfiles: processing control file: debian/openbabel/DEBIAN/control, package openbabel, directory debian/openbabel Searching for duplicated docs in dependency libopenbabel6... symlinking changelog.Debian.gz in openbabel to file in libopenbabel6 pkgstripfiles: Running PNG optimization (using 4 cpus) for package openbabel ... pkgstripfiles: No PNG files. dpkg-deb: building package 'openbabel' in '../openbabel_3.0.0+dfsg-2_arm64.deb'. INFO: pkgstripfiles: waiting for lock (libopenbabel-dev) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstriptranslations version 144 pkgstriptranslations: processing openbabel-dbgsym (in debian/.debhelper/openbabel/dbgsym-root); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (libopenbabel-dev) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " INFO: pkgstripfiles: waiting for lock (libopenbabel-dev) ... pkgstripfiles: processing control file: debian/.debhelper/openbabel/dbgsym-root/DEBIAN/control, package openbabel-dbgsym, directory debian/.debhelper/openbabel/dbgsym-root dpkg-deb: building package 'openbabel-dbgsym' in 'debian/.debhelper/scratch-space/build-openbabel/openbabel-dbgsym_3.0.0+dfsg-2_arm64.deb'. INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... Renaming openbabel-dbgsym_3.0.0+dfsg-2_arm64.deb to openbabel-dbgsym_3.0.0+dfsg-2_arm64.ddeb INFO: pkgstripfiles: waiting for lock (libopenbabel-dev) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstriptranslations version 144 pkgstriptranslations: processing openbabel-gui (in debian/openbabel-gui); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (libopenbabel-dev) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " INFO: pkgstripfiles: waiting for lock (libopenbabel-dev) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... pkgstripfiles: processing control file: debian/openbabel-gui/DEBIAN/control, package openbabel-gui, directory debian/openbabel-gui Searching for duplicated docs in dependency libopenbabel6... symlinking changelog.Debian.gz in openbabel-gui to file in libopenbabel6 pkgstripfiles: Running PNG optimization (using 4 cpus) for package openbabel-gui ... pkgstripfiles: No PNG files. dpkg-deb: building package 'openbabel-gui' in '../openbabel-gui_3.0.0+dfsg-2_arm64.deb'. Searching for duplicated docs in dependency libopenbabel6... symlinking changelog.Debian.gz in libopenbabel-dev to file in libopenbabel6 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libopenbabel-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libopenbabel-dev' in '../libopenbabel-dev_3.0.0+dfsg-2_arm64.deb'. INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstriptranslations version 144 pkgstriptranslations: processing libopenbabel6 (in debian/libopenbabel6); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... pkgstripfiles: processing control file: debian/libopenbabel6/DEBIAN/control, package libopenbabel6, directory debian/libopenbabel6 pkgstripfiles: Truncating usr/share/doc/libopenbabel6/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package libopenbabel6 ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... o pkgstripfiles: PNG optimization (1/0) for package libopenbabel6 took 5 s dpkg-deb: building package 'libopenbabel6' in '../libopenbabel6_3.0.0+dfsg-2_arm64.deb'. INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... Renaming libopenbabel6-dbgsym_3.0.0+dfsg-2_arm64.deb to libopenbabel6-dbgsym_3.0.0+dfsg-2_arm64.ddeb INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... INFO: pkgstriptranslations version 144 pkgstriptranslations: processing python3-openbabel (in debian/python3-openbabel); do_strip: , oemstrip: INFO: pkgstripfiles: waiting for lock (libchemistry-openbabel-perl) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/python3-openbabel/DEBIAN/control, package python3-openbabel, directory debian/python3-openbabel Searching for duplicated docs in dependency libopenbabel6... symlinking changelog.Debian.gz in python3-openbabel to file in libopenbabel6 pkgstripfiles: Running PNG optimization (using 4 cpus) for package python3-openbabel ... pkgstripfiles: No PNG files. dpkg-deb: building package 'python3-openbabel' in '../python3-openbabel_3.0.0+dfsg-2_arm64.deb'. Searching for duplicated docs in dependency libopenbabel6... symlinking changelog.Debian.gz in libchemistry-openbabel-perl to file in libopenbabel6 pkgstripfiles: Running PNG optimization (using 4 cpus) for package libchemistry-openbabel-perl ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libchemistry-openbabel-perl' in '../libchemistry-openbabel-perl_3.0.0+dfsg-2_arm64.deb'. INFO: pkgstriptranslations version 144 pkgstriptranslations: processing python3-openbabel-dbgsym (in debian/.debhelper/python3-openbabel/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/python3-openbabel/dbgsym-root/DEBIAN/control, package python3-openbabel-dbgsym, directory debian/.debhelper/python3-openbabel/dbgsym-root dpkg-deb: building package 'python3-openbabel-dbgsym' in 'debian/.debhelper/scratch-space/build-python3-openbabel/python3-openbabel-dbgsym_3.0.0+dfsg-2_arm64.deb'. INFO: pkgstriptranslations version 144 pkgstriptranslations: processing libchemistry-openbabel-perl-dbgsym (in debian/.debhelper/libchemistry-openbabel-perl/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/libchemistry-openbabel-perl/dbgsym-root/DEBIAN/control, package libchemistry-openbabel-perl-dbgsym, directory debian/.debhelper/libchemistry-openbabel-perl/dbgsym-root dpkg-deb: building package 'libchemistry-openbabel-perl-dbgsym' in 'debian/.debhelper/scratch-space/build-libchemistry-openbabel-perl/libchemistry-openbabel-perl-dbgsym_3.0.0+dfsg-2_arm64.deb'. Renaming python3-openbabel-dbgsym_3.0.0+dfsg-2_arm64.deb to python3-openbabel-dbgsym_3.0.0+dfsg-2_arm64.ddeb Renaming libchemistry-openbabel-perl-dbgsym_3.0.0+dfsg-2_arm64.deb to libchemistry-openbabel-perl-dbgsym_3.0.0+dfsg-2_arm64.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../openbabel_3.0.0+dfsg-2_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20200123-0009 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ openbabel_3.0.0+dfsg-2_arm64.changes: ------------------------------------- Format: 1.8 Date: Wed, 22 Jan 2020 10:07:47 -0500 Source: openbabel Binary: libchemistry-openbabel-perl libopenbabel-dev libopenbabel6 openbabel openbabel-gui python3-openbabel Architecture: arm64 Version: 3.0.0+dfsg-2 Distribution: focal-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andrius Merkys Description: libchemistry-openbabel-perl - Chemical toolbox library (perl bindings) libopenbabel-dev - Chemical toolbox library (development files) libopenbabel6 - Chemical toolbox library openbabel - Chemical toolbox utilities (cli) openbabel-gui - Chemical toolbox utilities (graphical user interface) python3-openbabel - Chemical toolbox library (Python bindings) Changes: openbabel (3.0.0+dfsg-2) unstable; urgency=medium . * Upload to unstable (Closes #946263). * Adding a patch to fix hardcoded include directories. * Installing shared libraries in multiarch directories. * Adding autopkgtest. 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It allows one to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. Features include: . * Hydrogen addition and deletion * Support for Molecular Mechanics * Support for SMARTS molecular matching syntax * Automatic feature perception (rings, bonds, hybridization, aromaticity) * Flexible atom typer and perception of multiple bonds from atomic coordinates * Gasteiger-Marsili partial charge calculation . File formats Open Babel supports include PDB, XYZ, CIF, CML, SMILES, MDL Molfile, ChemDraw, Gaussian, GAMESS, MOPAC and MPQC. . 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2020-01-22 15:07 ./usr/share/doc/libopenbabel-dev/changelog.Debian.gz -> ../libopenbabel6/changelog.Debian.gz -rw-r--r-- root/root 33658 2020-01-22 15:07 ./usr/share/doc/libopenbabel-dev/copyright libopenbabel6_3.0.0+dfsg-2_arm64.deb ------------------------------------ new debian package, version 2.0. size 3296700 bytes: control archive=5708 bytes. 1353 bytes, 30 lines control 13564 bytes, 185 lines md5sums 45 bytes, 1 lines shlibs 74 bytes, 2 lines triggers Package: libopenbabel6 Source: openbabel Version: 3.0.0+dfsg-2 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debichem Team Installed-Size: 14962 Depends: libc6 (>= 2.29), libcairo2 (>= 1.2.4), libgcc1 (>= 1:3.0), libgomp1 (>= 4.9), libschroedinger-maeparser1, libstdc++6 (>= 9), libxml2 (>= 2.7.4), zlib1g (>= 1:1.1.4) Conflicts: libopenbabel4 Replaces: libopenbabel4 Section: libs Priority: optional Homepage: http://openbabel.sourceforge.net Description: Chemical toolbox library Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It allows one to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. Features include: . * Hydrogen addition and deletion * Support for Molecular Mechanics * Support for SMARTS molecular matching syntax * Automatic feature perception (rings, bonds, hybridization, aromaticity) * Flexible atom typer and perception of multiple bonds from atomic coordinates * Gasteiger-Marsili partial charge calculation . File formats Open Babel supports include PDB, XYZ, CIF, CML, SMILES, MDL Molfile, ChemDraw, Gaussian, GAMESS, MOPAC and MPQC. . 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bytes, 3 lines md5sums Package: openbabel-gui Source: openbabel Version: 3.0.0+dfsg-2 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debichem Team Installed-Size: 376 Depends: libc6 (>= 2.17), libgcc1 (>= 1:3.0), libopenbabel6 (>= 3.0.0+dfsg), libstdc++6 (>= 5.2), libwxbase3.0-0v5 (>= 3.0.4+dfsg), libwxgtk3.0-gtk3-0v5 (>= 3.0.4+dfsg-10~) Section: science Priority: optional Homepage: http://openbabel.sourceforge.net Description: Chemical toolbox utilities (graphical user interface) Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It allows one to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. Features include: . * Hydrogen addition and deletion * Support for Molecular Mechanics * Support for SMARTS molecular matching syntax * Automatic feature perception (rings, bonds, hybridization, aromaticity) * Flexible atom typer and perception of multiple bonds from atomic coordinates * Gasteiger-Marsili partial charge calculation . File formats Open Babel supports include PDB, XYZ, CIF, CML, SMILES, MDL Molfile, ChemDraw, Gaussian, GAMESS, MOPAC and MPQC. . This package contains the openbabel GUI based on wxWidgets. drwxr-xr-x root/root 0 2020-01-22 15:07 ./ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/bin/ -rwxr-xr-x root/root 331480 2020-01-22 15:07 ./usr/bin/obgui drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/share/ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/share/doc/openbabel-gui/ lrwxrwxrwx root/root 0 2020-01-22 15:07 ./usr/share/doc/openbabel-gui/changelog.Debian.gz -> ../libopenbabel6/changelog.Debian.gz -rw-r--r-- root/root 33658 2020-01-22 15:07 ./usr/share/doc/openbabel-gui/copyright drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/share/man/ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/share/man/man1/ -rw-r--r-- root/root 451 2020-01-22 15:07 ./usr/share/man/man1/obgui.1.gz openbabel_3.0.0+dfsg-2_arm64.deb -------------------------------- new debian package, version 2.0. size 118096 bytes: control archive=2376 bytes. 1874 bytes, 39 lines control 2674 bytes, 44 lines md5sums Package: openbabel Version: 3.0.0+dfsg-2 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debichem Team Installed-Size: 565 Depends: libc6 (>= 2.17), libgcc1 (>= 1:3.0), libopenbabel6 (>= 3.0.0+dfsg), libstdc++6 (>= 5.2) Section: science Priority: optional Homepage: http://openbabel.sourceforge.net Description: Chemical toolbox utilities (cli) Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It allows one to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. Features include: . * Hydrogen addition and deletion * Support for Molecular Mechanics * Support for SMARTS molecular matching syntax * Automatic feature perception (rings, bonds, hybridization, aromaticity) * Flexible atom typer and perception of multiple bonds from atomic coordinates * Gasteiger-Marsili partial charge calculation . File formats Open Babel supports include PDB, XYZ, CIF, CML, SMILES, MDL Molfile, ChemDraw, Gaussian, GAMESS, MOPAC and MPQC. . This package includes the following utilities: * babel: Convert between various chemical file formats * obenergy: Calculate the energy for a molecule * obminimize: Optimize the geometry, minimize the energy for a molecule * obgrep: Molecular search program using SMARTS pattern * obgen: Generate 3D coordinates for a molecule * obprop: Print standard molecular properties * obfit: Superimpose two molecules based on a pattern * obrotamer: Generate conformer/rotamer coordinates * obconformer: Generate low-energy conformers * obchiral: Print molecular chirality information * obrotate: Rotate dihedral angle of molecules in batch mode * obprobe: Create electrostatic probe grid drwxr-xr-x root/root 0 2020-01-22 15:07 ./ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/bin/ -rwxr-xr-x root/root 26800 2020-01-22 15:07 ./usr/bin/obabel -rwxr-xr-x root/root 14512 2020-01-22 15:07 ./usr/bin/obconformer -rwxr-xr-x root/root 14512 2020-01-22 15:07 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* prerm #!/bin/sh Package: python3-openbabel Source: openbabel Version: 3.0.0+dfsg-2 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debichem Team Installed-Size: 3330 Depends: python3 (<< 3.8), python3 (>= 3.7~), python3:any, libc6 (>= 2.17), libgcc1 (>= 1:3.0), libopenbabel6 (>= 3.0.0+dfsg), libpython3.7 (>= 3.7.0), libstdc++6 (>= 5.2) Provides: python3.7-openbabel Section: python Priority: optional Homepage: http://openbabel.sourceforge.net Description: Chemical toolbox library (Python bindings) Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It allows one to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. Features include: . * Hydrogen addition and deletion * Support for Molecular Mechanics * Support for SMARTS molecular matching syntax * Automatic feature perception (rings, bonds, hybridization, aromaticity) * Flexible atom typer and perception of multiple bonds from atomic coordinates * Gasteiger-Marsili partial charge calculation . File formats Open Babel supports include PDB, XYZ, CIF, CML, SMILES, MDL Molfile, ChemDraw, Gaussian, GAMESS, MOPAC and MPQC. . This package contains the Python binding. drwxr-xr-x root/root 0 2020-01-22 15:07 ./ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/lib/ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/lib/python3/ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/lib/python3/dist-packages/openbabel/ -rw-r--r-- root/root 527 2019-10-10 20:20 ./usr/lib/python3/dist-packages/openbabel/__init__.py -rw-r--r-- root/root 2647584 2020-01-22 15:07 ./usr/lib/python3/dist-packages/openbabel/_openbabel.cpython-37m-aarch64-linux-gnu.so -rw-r--r-- root/root 279964 2019-10-03 19:28 ./usr/lib/python3/dist-packages/openbabel/openbabel.py -rw-r--r-- root/root 34580 2019-09-25 18:09 ./usr/lib/python3/dist-packages/openbabel/pybel.py drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/share/ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/share/doc-base/ -rw-r--r-- root/root 559 2020-01-22 15:07 ./usr/share/doc-base/python3-openbabel-openbabel -rw-r--r-- root/root 559 2020-01-22 15:07 ./usr/share/doc-base/python3-openbabel-pybel drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/share/doc/python3-openbabel/ -rw-r--r-- root/root 3204 2020-01-22 15:07 ./usr/share/doc/python3-openbabel/Examples.html lrwxrwxrwx root/root 0 2020-01-22 15:07 ./usr/share/doc/python3-openbabel/changelog.Debian.gz -> ../libopenbabel6/changelog.Debian.gz -rw-r--r-- root/root 33658 2020-01-22 15:07 ./usr/share/doc/python3-openbabel/copyright drwxr-xr-x root/root 0 2020-01-22 15:07 ./usr/share/doc/python3-openbabel/examples/ -rw-r--r-- root/root 45293 2019-09-25 18:09 ./usr/share/doc/python3-openbabel/examples/dalke_test.py -rw-r--r-- root/root 1180 2019-09-25 18:09 ./usr/share/doc/python3-openbabel/examples/energy.py -rw-r--r-- root/root 674 2019-09-25 18:09 ./usr/share/doc/python3-openbabel/examples/examples.py -rw-r--r-- root/root 486 2019-09-25 18:09 ./usr/share/doc/python3-openbabel/examples/findcoverage.bat -rw-r--r-- root/root 269694 2019-09-25 18:09 ./usr/share/doc/python3-openbabel/examples/hashizume.cif -rw-r--r-- root/root 4316 2019-09-25 18:09 ./usr/share/doc/python3-openbabel/examples/head.sdf -rw-r--r-- root/root 1421 2019-09-25 18:09 ./usr/share/doc/python3-openbabel/examples/minSimple.py -rw-r--r-- root/root 17385 2019-09-25 18:09 ./usr/share/doc/python3-openbabel/examples/testpybel.py -rw-r--r-- root/root 1673 2019-09-25 18:09 ./usr/share/doc/python3-openbabel/examples/wgtRotorSrch.py -rw-r--r-- root/root 34343 2019-09-25 18:09 ./usr/share/doc/python3-openbabel/pybelapi.html +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build-Space: 1795068 Build-Time: 3196 Distribution: focal-proposed Host Architecture: arm64 Install-Time: 174 Job: openbabel_3.0.0+dfsg-2.dsc Machine Architecture: arm64 Package: openbabel Package-Time: 3382 Source-Version: 3.0.0+dfsg-2 Space: 1795068 Status: successful Version: 3.0.0+dfsg-2 -------------------------------------------------------------------------------- Finished at 20200123-0009 Build needed 00:56:22, 1795068k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=arm64 PACKAGEBUILD-18599927 Scanning for processes to kill in build PACKAGEBUILD-18599927