RUN: /bin/echo ['echo', 'Forking build subprocess...'] Forking build subprocess... RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '1096941-2672378', '/home/buildd/filecache-default/84f655e6efdc5ba6e41943da38841658e52b07ef'] Synching the system clock with the buildd NTP service... 5 Oct 01:55:38 ntpdate[8209]: adjust time server 10.211.37.1 offset -0.000007 sec Unpacking chroot for build 1096941-2672378 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '1096941-2672378'] Mounting chroot for build 1096941-2672378 RUN: /usr/share/launchpad-buildd/slavebin/apply-ogre-model ['apply-ogre-model', '1096941-2672378', 'universe'] Attempting OGRE for universe in build-1096941-2672378 No OGRE sources.list found. RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '1096941-2672378', 'deb http://ftpmaster.internal/ubuntu karmic main universe'] Overriding sources.list in build-1096941-2672378 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '1096941-2672378'] Updating debian chroot for build 1096941-2672378 Get:1 http://ftpmaster.internal karmic Release.gpg [189B] Get:2 http://ftpmaster.internal karmic Release [65.9kB] Get:3 http://ftpmaster.internal karmic/main Packages [1337kB] Get:4 http://ftpmaster.internal karmic/universe Packages [4860kB] Fetched 6263kB in 18s (343kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: python2.6-minimal 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 0B/1373kB of archives. After this operation, 0B of additional disk space will be used. WARNING: The following packages cannot be authenticated! python2.6-minimal debconf: delaying package configuration, since apt-utils is not installed Authentication warning overridden. (Reading database ... 10499 files and directories currently installed.) Preparing to replace python2.6-minimal 2.6.3-0ubuntu1 (using .../python2.6-minimal_2.6.3-0ubuntu2_armel.deb) ... Unpacking replacement python2.6-minimal ... Setting up python2.6-minimal (2.6.3-0ubuntu2) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '1096941-2672378', '--nolog', '--batch', '--archive=ubuntu', '--purpose=PRIMARY', '--dist=karmic', '--comp=universe', 'openmpi_1.3.2-3ubuntu1.dsc'] Initiating build 1096941-2672378 with 0 processor cores. Automatic build of openmpi_1.3.2-3ubuntu1 on imbe by sbuild/armel 1.170.5 Build started at 20091005-0156 ****************************************************************************** openmpi_1.3.2-3ubuntu1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 5.0.0), libibverbs-dev (>= 1.1.1) [!kfreebsd-i386 !kfreebsd-amd64 !hurd-i386], gfortran, gcc (>= 4:4.1.2), chrpath, quilt Checking for already installed source dependencies... debhelper: missing libibverbs-dev: missing gfortran: missing gcc: already installed (4:4.4.1-1ubuntu2 >= 4:4.1.2 is satisfied) chrpath: missing quilt: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper libibverbs-dev gfortran chrpath quilt Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: adduser bsdmainutils diffstat file gettext gettext-base gfortran-4.4 groff-base html2text intltool-debian libcroco3 libgfortran3 libglib2.0-0 libibverbs1 libmagic1 libpcre3 libxml2 man-db po-debconf Suggested packages: ecryptfs-utils wamerican wordlist whois vacation dh-make cvs gettext-doc gfortran-doc gfortran-4.4-doc libgfortran3-dbg groff less www-browser libmail-box-perl procmail graphviz Recommended packages: curl wget lynx libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl The following NEW packages will be installed: adduser bsdmainutils chrpath debhelper diffstat file gettext gettext-base gfortran gfortran-4.4 groff-base html2text intltool-debian libcroco3 libgfortran3 libglib2.0-0 libibverbs-dev libibverbs1 libmagic1 libpcre3 libxml2 man-db po-debconf quilt 0 upgraded, 24 newly installed, 0 to remove and 0 not upgraded. Need to get 4444kB/12.6MB of archives. After this operation, 39.1MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! adduser libmagic1 file libpcre3 libglib2.0-0 libxml2 bsdmainutils gettext-base groff-base man-db chrpath html2text libcroco3 gettext intltool-debian po-debconf debhelper diffstat libgfortran3 gfortran-4.4 gfortran quilt libibverbs1 libibverbs-dev Authentication warning overridden. Get:1 http://ftpmaster.internal karmic/main libgfortran3 4.4.1-4ubuntu6 [240kB] Get:2 http://ftpmaster.internal karmic/main gfortran-4.4 4.4.1-4ubuntu6 [4104kB] Get:3 http://ftpmaster.internal karmic/universe libibverbs1 1.1.2-1ubuntu2 [27.3kB] Get:4 http://ftpmaster.internal karmic/universe libibverbs-dev 1.1.2-1ubuntu2 [72.6kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 4444kB in 0s (6193kB/s) Selecting previously deselected package adduser. (Reading database ... 10499 files and directories currently installed.) Unpacking adduser (from .../adduser_3.110ubuntu6_all.deb) ... Selecting previously deselected package libmagic1. Unpacking libmagic1 (from .../libmagic1_5.03-1ubuntu1_armel.deb) ... Selecting previously deselected package file. Unpacking file (from .../file_5.03-1ubuntu1_armel.deb) ... Selecting previously deselected package libpcre3. Unpacking libpcre3 (from .../libpcre3_7.8-2ubuntu1_armel.deb) ... Selecting previously deselected package libglib2.0-0. Unpacking libglib2.0-0 (from .../libglib2.0-0_2.22.1-0ubuntu1_armel.deb) ... Selecting previously deselected package libxml2. Unpacking libxml2 (from .../libxml2_2.7.3.dfsg-1ubuntu2_armel.deb) ... Selecting previously deselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_6.1.10ubuntu4_armel.deb) ... Selecting previously deselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.17-6ubuntu2_armel.deb) ... Selecting previously deselected package groff-base. Unpacking groff-base (from .../groff-base_1.20.1-5_armel.deb) ... Selecting previously deselected package man-db. Unpacking man-db (from .../man-db_2.5.6-2_armel.deb) ... Selecting previously deselected package chrpath. Unpacking chrpath (from .../chrpath_0.13-2build1_armel.deb) ... Selecting previously deselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-14_armel.deb) ... Selecting previously deselected package libcroco3. Unpacking libcroco3 (from .../libcroco3_0.6.1-2_armel.deb) ... Selecting previously deselected package gettext. Unpacking gettext (from .../gettext_0.17-6ubuntu2_armel.deb) ... Selecting previously deselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously deselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.16_all.deb) ... Selecting previously deselected package debhelper. Unpacking debhelper (from .../debhelper_7.3.15ubuntu3_all.deb) ... Selecting previously deselected package diffstat. Unpacking diffstat (from .../diffstat_1.47-1_armel.deb) ... Selecting previously deselected package libgfortran3. Unpacking libgfortran3 (from .../libgfortran3_4.4.1-4ubuntu6_armel.deb) ... Selecting previously deselected package gfortran-4.4. Unpacking gfortran-4.4 (from .../gfortran-4.4_4.4.1-4ubuntu6_armel.deb) ... Selecting previously deselected package gfortran. Unpacking gfortran (from .../gfortran_4%3a4.4.1-1ubuntu2_armel.deb) ... Selecting previously deselected package quilt. Unpacking quilt (from .../quilt_0.46-8ubuntu1_all.deb) ... Selecting previously deselected package libibverbs1. Unpacking libibverbs1 (from .../libibverbs1_1.1.2-1ubuntu2_armel.deb) ... Selecting previously deselected package libibverbs-dev. Unpacking libibverbs-dev (from .../libibverbs-dev_1.1.2-1ubuntu2_armel.deb) ... Setting up adduser (3.110ubuntu6) ... Setting up libmagic1 (5.03-1ubuntu1) ... Setting up file (5.03-1ubuntu1) ... Setting up libpcre3 (7.8-2ubuntu1) ... Setting up libglib2.0-0 (2.22.1-0ubuntu1) ... Setting up libxml2 (2.7.3.dfsg-1ubuntu2) ... Setting up bsdmainutils (6.1.10ubuntu4) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. Setting up gettext-base (0.17-6ubuntu2) ... Setting up groff-base (1.20.1-5) ... Setting up man-db (2.5.6-2) ... Building database of manual pages ... ... skipping, since this is a buildd Setting up chrpath (0.13-2build1) ... Setting up html2text (1.3.2a-14) ... Setting up libcroco3 (0.6.1-2) ... Setting up gettext (0.17-6ubuntu2) ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package gettext should be updated. Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16) ... Setting up debhelper (7.3.15ubuntu3) ... Setting up diffstat (1.47-1) ... Setting up libgfortran3 (4.4.1-4ubuntu6) ... Setting up gfortran-4.4 (4.4.1-4ubuntu6) ... Setting up gfortran (4:4.4.1-1ubuntu2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode. Setting up quilt (0.46-8ubuntu1) ... Setting up libibverbs1 (1.1.2-1ubuntu2) ... Setting up libibverbs-dev (1.1.2-1ubuntu2) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.10.1-0ubuntu13 make_3.81-6 dpkg-dev_1.15.4ubuntu2 g++-4.4_4.4.1-4ubuntu6 gcc-4.4_4.4.1-4ubuntu6 binutils_2.19.91.20091001-0ubuntu2 libstdc++6_4.4.1-4ubuntu6 libstdc++6-4.4-dev_4.4.1-4ubuntu6 ------------------------------------------------------------------------------ gpg: Signature made Sun Jun 28 09:23:38 2009 BST using DSA key ID 71356C60 gpg: Can't check signature: public key not found dpkg-source: extracting openmpi in openmpi-1.3.2 dpkg-source: info: unpacking openmpi_1.3.2.orig.tar.gz dpkg-source: info: applying openmpi_1.3.2-3ubuntu1.diff.gz dpkg-buildpackage: set CFLAGS to default value: -g -O2 dpkg-buildpackage: set CPPFLAGS to default value: dpkg-buildpackage: set LDFLAGS to default value: -Wl,-Bsymbolic-functions dpkg-buildpackage: set FFLAGS to default value: -g -O2 dpkg-buildpackage: set CXXFLAGS to default value: -g -O2 dpkg-buildpackage: source package openmpi dpkg-buildpackage: source version 1.3.2-3ubuntu1 dpkg-buildpackage: host architecture armel /usr/bin/fakeroot debian/rules clean dh_testdir dh_testroot rm -rf configure-stamp build/ build-shared-stamp build-static-stamp check-stamp rm -rf check debian/openmpi xargs rm -f < debian/clean_symlinks [ ! -f Makefile ] || /usr/bin/make distclean rm -rf opal/libltdl/.libs dh_clean QUILT_PATCHES=debian/patches quilt --quiltrc /dev/null pop -a -R || test $? = 2 No patch removed rm -rf .pc debian/stamp-patched debian/rules build QUILT_PATCHES=debian/patches quilt --quiltrc /dev/null push -a || test $? = 2 Applying patch alpha_build patching file ompi/contrib/vt/vt/vtlib/vt_pform_linux.c patching file opal/asm/base/ALPHA.asm patching file opal/asm/generated/atomic-alpha-linux.s Applying patch disable-memory-allocator patching file opal/mca/memory/ptmalloc2/hooks.c Applying patch sparc_build patching file ompi/contrib/vt/vt/vtlib/vt_pform_linux.c Applying patch manpage-errors patching file orte/tools/orterun/orterun.1in Now at patch manpage-errors touch debian/stamp-patched dh_testdir mkdir -p build/shared (cd build/shared && LDFLAGS="" CFLAGS="-Wall -g -O2" ../../configure --build arm-linux-gnueabi --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc/openmpi --libdir=\${prefix}/lib/openmpi/lib --includedir=\${prefix}/lib/openmpi/include --with-devel-headers) checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking how to create a ustar tar archive... gnutar ============================================================================ == Configuring Open MPI ============================================================================ *** Checking versions checking Open MPI version... 1.3.2 checking Open MPI release date... Apr 21, 2009 checking Open MPI Subversion repository version... r21054 checking Open Run-Time Environment version... 1.3.2 checking Open Run-Time Environment release date... Apr 21, 2009 checking Open Run-Time Environment Subversion repository version... r21054 checking Open Portable Access Layer version... 1.3.2 checking Open Portable Access Layer release date... Apr 21, 2009 checking Open Portable Access Layer Subversion repository version... r21054 *** Initialization, setup configure: builddir: /build/buildd/openmpi-1.3.2/build/shared configure: srcdir: /build/buildd/openmpi-1.3.2 configure: Detected VPATH build checking build system type... arm-unknown-linux-gnueabi checking host system type... arm-unknown-linux-gnueabi installing to directory "/usr" *** Configuration options checking whether to run code coverage... no checking whether to compile with branch probabilities... no checking whether to debug memory usage... no checking whether to profile memory usage... no checking if want developer-level compiler pickyness... no checking if want developer-level debugging code... no checking if want sparse process groups... no checking if want Fortran 77 bindings... yes checking if want Fortran 90 bindings... yes checking desired Fortran 90 bindings "size"... small checking whether to enable PMPI... yes checking if want C++ bindings... yes checking if want MPI::SEEK_SET support... yes checking if want to enable weak symbol support... yes checking if want run-time MPI parameter checking... runtime checking if want to install OMPI header files... yes checking if want pretty-print stacktrace... yes checking if peruse support is required... no checking max supported array dimension in F90 MPI bindings... 4 checking if pty support should be enabled... yes checking if user wants dlopen support... yes checking if heterogeneous support should be enabled... no checking if want trace file debugging... no checking if want full RTE support... yes checking if want fault tolerance... Disabled fault tolerance checking if want IPv6 support... yes (if underlying system supports it) checking if want orterun "--prefix" behavior to be enabled by default... no checking for package/brand string... Open MPI buildd@imbe Distribution checking for ident string... 1.3.2 checking whether to add padding to the openib control header... no checking whether to use an alternative checksum algo for messages... no ============================================================================ == Compiler and preprocessor tests ============================================================================ *** C compiler and preprocessor checking for style of include used by make... GNU checking for gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking dependency style of gcc... gcc3 checking whether gcc and cc understand -c and -o together... yes checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for the C compiler vendor... gnu checking for ANSI C header files... yes checking if gcc supports -finline-functions... yes checking if gcc supports -fno-strict-aliasing... yes configure: WARNING: -fno-strict-aliasing has been added to CFLAGS checking if gcc supports __builtin_expect... yes checking if gcc supports __builtin_prefetch... yes checking for C optimization flags... -DNDEBUG -Wall -g -O2 -finline-functions -fno-strict-aliasing checking for Interix environment... no checking for C ident string support... #ident checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for long long... yes checking for long double... yes checking for int8_t... yes checking for uint8_t... yes checking for int16_t... yes checking for uint16_t... yes checking for int32_t... yes checking for uint32_t... yes checking for int64_t... yes checking for uint64_t... yes checking for intptr_t... yes checking for uintptr_t... yes checking for mode_t... yes checking for ssize_t... yes checking for ptrdiff_t... yes checking size of char... 1 checking size of short... 2 checking size of int... 4 checking size of long... 4 checking size of long long... 8 checking size of long double... 8 checking size of float... 4 checking size of double... 8 checking size of void *... 4 checking size of size_t... 4 checking size of ssize_t... 4 checking size of ptrdiff_t... 4 checking alignment of char... 1 checking alignment of short... 2 checking alignment of wchar_t... 4 checking alignment of int... 4 checking alignment of long... 4 checking alignment of long long... 8 checking alignment of float... 4 checking alignment of double... 8 checking alignment of long double... 8 checking alignment of void *... 4 checking for C bool type... no checking for inline... __inline__ checking for C/C++ restrict keyword... __restrict checking for weak symbol support... yes *** C++ compiler and preprocessor checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking how to run the C++ preprocessor... g++ -E checking for the C++ compiler vendor... gnu checking if C++ compiler works... yes checking if g++ supports -finline-functions... yes configure: WARNING: -finline-functions has been added to CXXFLAGS checking if want C++ exception handling... no checking if C and C++ are link compatible... yes checking for C++ template_repository_directory... not used checking for C++ compiler template parameters... none needed checking if g++ supports __builtin_expect... yes checking if g++ supports __builtin_prefetch... yes checking if g++ supports const_cast<> properly... yes checking for C++ optimization flags... -DNDEBUG -g -O2 -finline-functions checking for C++ ident string support... #ident checking size of bool... 1 checking alignment of bool... 1 checking for __attribute__... yes checking for __attribute__(aligned)... yes checking for __attribute__(always_inline)... yes checking for __attribute__(cold)... yes checking for __attribute__(const)... yes checking for __attribute__(deprecated)... yes checking for __attribute__(format)... yes checking for __attribute__(hot)... yes checking for __attribute__(malloc)... yes checking for __attribute__(may_alias)... yes checking for __attribute__(no_instrument_function)... yes checking for __attribute__(nonnull)... yes checking for __attribute__(noreturn)... yes checking for __attribute__(packed)... yes checking for __attribute__(pure)... yes checking for __attribute__(sentinel)... yes checking for __attribute__(unused)... yes checking for __attribute__(visibility)... yes checking for __attribute__(warn_unused_result)... yes checking for __attribute__(weak_alias)... yes *** Assembler checking dependency style of gcc... gcc3 checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking for fgrep... /bin/grep -F checking if need to remove -g from CCASFLAGS... no checking whether to enable smp locks... yes checking if .proc/endp is needed... no checking directive for setting text section... .text checking directive for exporting symbols... .globl checking for objdump... objdump checking if .note.GNU-stack is needed... yes checking suffix for labels... : checking prefix for global symbol labels... checking prefix for lsym labels... .L checking prefix for function in .type... # checking if .size is needed... yes checking if .align directive takes logarithmic value... yes configure: error: No atomic primitives available for arm-unknown-linux-gnueabi make: *** [build-shared-stamp] Error 1 dpkg-buildpackage: error: debian/rules build gave error exit status 2 ****************************************************************************** Build finished at 20091005-0158 FAILED [dpkg-buildpackage died] Purging chroot-autobuild/build/buildd/openmpi-1.3.2 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --purge intltool-debian groff-base adduser libibverbs-dev libglib2.0-0 gettext file libibverbs1 html2text diffstat gettext-base debhelper po-debconf quilt libcroco3 libmagic1 gfortran gfortran-4.4 libgfortran3 libxml2 chrpath bsdmainutils libpcre3 man-db (Reading database ... 11858 files and directories currently installed.) Removing libibverbs-dev ... Removing libibverbs1 ... Purging configuration files for libibverbs1 ... Removing debhelper ... Removing po-debconf ... Removing quilt ... Purging configuration files for quilt ... Removing gfortran ... Removing gfortran-4.4 ... Removing libgfortran3 ... Purging configuration files for libgfortran3 ... Removing chrpath ... Removing man-db ... Purging configuration files for man-db ... Removing intltool-debian ... Removing groff-base ... Purging configuration files for groff-base ... Removing adduser ... Purging configuration files for adduser ... Removing gettext ... install-info: warning: maintainer scripts should not call install-info anymore, install-info: warning: this is handled now by a dpkg trigger provided by the install-info: warning: install-info package; package gettext should be updated. Removing file ... Purging configuration files for file ... Removing html2text ... Purging configuration files for html2text ... Removing diffstat ... Removing gettext-base ... Removing libcroco3 ... Purging configuration files for libcroco3 ... Removing libmagic1 ... Purging configuration files for libmagic1 ... Removing libxml2 ... Purging configuration files for libxml2 ... Removing bsdmainutils ... Purging configuration files for bsdmainutils ... Removing libglib2.0-0 ... Purging configuration files for libglib2.0-0 ... Removing libpcre3 ... Purging configuration files for libpcre3 ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place ****************************************************************************** Finished at 20091005-0158 Build needed 00:01:21, 59364k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '1096941-2672378'] Scanning for processes to kill in build /srv/home/buildd/build-1096941-2672378/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '1096941-2672378'] Unmounting chroot for build 1096941-2672378... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '1096941-2672378'] Removing build 1096941-2672378